Carg23262 (gene) Silver-seed gourd

Overview
NameCarg23262
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTranscription termination factor like
LocationCucurbita_argyrosperma_scaffold_231 : 37917 .. 42500 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGTTTGGATGTTTTATTCTCTGAGTTTTTGTGGGTTTGACTGAAATTGGGATGTTTCTATGCGAATTTTTAGGACCTGGACTCCATACGTTGATAATTTGTTGTTTTTCTAGGGTTGTCTTATGCTTAATTATGTGTTTCTGTAAGTTTGTGCATCTGCAAATTGTTGTGATCTTGTATGTAGCATTACTATCTCTGGGAAGCTAGCAACTCCTTGATATATATATATGTATATATATTTTGAGCTTACTGCTATATTAGTGCATAGGGGATGGATGTCTGAACGGTTGGAAAGATTGGAAGAGTCGGTATTGAAAACTAAATGATGTTTTCACAACTCTACCACCTAGTTAATTTCGTTCCACTCAATGCCTATTTCATGCCAACCCTTTTCCCTTAGCCCTTTCACTCCATAAGGAAGGTAAAACCACATCTAAATCGGTAAAAATCTAACTGCCCAAGCCTACCGGTAGCAAATATCCTCTTTGGGCTTTCCCTCAAGGTTTTAAAATGCGTTTACTAGGGAGAGGTTTCCACACCCTTATAAGAAATGCTTCGTTCCCCTCTCCAACCGATTTGAGATCTCACAAAAAAGAATGAATACGAATGAGATTCACAATGCTTTCGTTGTAAGTTGTGTAATACTAACCTACCTTACACGCCCATTAGTTCAACACGAACATTATATGATTATAAACTTAGAGGCCTTGAAAAGATAAAGAAGTATCGATAACTTTTTCGTGCTCATGTCAATTGTTGACCAAATTATCTGAGATGATCCATATGGTAATATTGAATCCTCAGTAAAAGTTCATTTGAGTATAAGATAAACCAAGTTCATTACTTCAAAAGGAAACCTATTAAGATTAAAGGAGTAAACGTACCAAAAATTTCCGTAGGATTCTGAGTCTGCCCTACATTTGCAGAAAACCGAGGAGGGGTTACTTCTCCTTCATCTGCAAGGGGATAGACCCTGGCGAGGTTTGTTTAGGAGAGTGCTTTGTCTCAAACAGCGAGGAGGAAACTCTTTTCAGTTTGCAATGGAGAGACTTCCTCTATTTAAATGAACCAGTTGATATGGCTCTCTCTCTCTCGTTTTGGTTCTTCCTCGTTTTTCTTTTAAAGTTTTGAATATAATTTGACGCTGATTCAAATGTTTAGAAATTCTGGACTATGTAGTACTTTGGAAGTGGATATGGATCGTCAATACGTGAACTAGTAGGTAATCTAAATCAAATTTTTAGTGAACTTTAGTATTGTAGTGTTATCCTGTAAGTAGAGGGCGAGTTAATCCATCTTGTACAGTATTTTGTTATTCGTGGATATATTTATTTTTTCTTATTTTATTATTATTATTTTTTAAATTGTAACATATACGCAGTTTTTCCAGGGTGCAGGGTGCAAAACCTGGAGTTATGATGATCAGAGGCCATACTGGTGTGCTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACCCTTAAATGTCACAAATTCAAATTTGGTACGACATCAACTTTTCAAACGTCTCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGTTACAGTACTCTCGTGGTGATAGGAGAACAGTATCCAAATCTCTGCATTCTACTATTACATCAAAGCCTTACAGTTCTAAAGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGACAGGAAAATCGTGCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTATTGTTCCTGATGAACTTGATGGATTGGAGCTTCCAGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAACTAGGACTTACCATTGAAGATATAAATAACTACCCCCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGGTACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCCAGCGTCGTTGTGGACCTTGGTCCAGTAGTCAAATATCTTCAGGGCATGGATATTAAACCAAGTGATATCCCGCGTGTTCTTGAGAGATATCCAGAAGTATTGGGGTTTAAGCTCGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATCGGAGTGGCAAGAAGAGAAATCGGAGGGGTTTTAACCAAGTACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTCGTAGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCCGTGGCTAGGTTAATAGAGAAACGACCACACATTCTCGGGTTCGGATTGGAAAAAAGGGTCAAACCCAACATCCAATTGCTCTTGGAGTTTAATGTGAGAGAAGCATATCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAACAATAACTTCGGCACTATAATTGAAAAGATGCCACAAGTTGTTAGCCTTAGCAGTTCGGCTGTGAACAGCCATGTCGATTTCTTAAAAAGTTGTGGGTTTTCCTTGCAGCAAGTAAAGAACATGGTTATAGGTTGTCCCCAGTTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCGAAAGGAGATGGGAAGGCCTTTAGACGATCTGGTCGCTTTTCCTGCGTTCTTTACGTATGGTCTGGAGTCCACAATAAAGCCTAGACATAGGAAGGTTGTACAGAAGGGAGTTACCTGTTCTCTTTCATGGCTCCTCAATTGTTCCGATGAAAAGTTCGCTGAAAGGATGACCTACGACACCATAGATATGGAGGAGATGGAAACTGCACCAACGTTCGATATGAGTTCTCTTACACAACCCCGGTATGATGAATCGGATTCTGACTATGAAGAGGACAGCGAGGAGGAGACTTAACGGGCTATTGTCTTGGCTTTGGAAATGGTTTCGACTGGAGGGGAGTGGTTATTTTTGCCATTTTATGGATCTCGTTAGAGTCGGCAACAAGTTTTGAAAAGGTAAGATCCTTCAGTTTTATTCTGCCATATAAAATTTGAGTGCAATTTTTGTTCTCTTTTATTAGTTAAAACTGTTTACCACGACGTATGACATAGTAAGCCTGATCGTATAATGCGATCGTATTTTGTCTTGTTGAAACTGATTTATATGAAAGTCATCATAGGCGCTCGCTAACTGTATCTGTCATCCTCTTGTAGTTATCTTGTTGTGAAGGAAATTATATTAGTCTTACGATTACGGTTTATGACTCGTCTCGAATTACAAGAGACGTAGCTACCTGCATGACTAGATGAATGAAAAAAACAACTTTGTATGATATTTCTTATATTTTGCTCACTACGTGATATGATCCAAGCATTATTGAAACATTGCTTTGTTCTACCGATTTCGTTTCATTGATGGAATCTTACTTTTCAACTGCATCCGAATGAGGAACAAAGTCACCTCCTTGTATTAACTCCATGGTATTTCTGCTTTCATCTGAAATCTCGTACAGTTCCTCGCACCTTTTTCATCGAATGAGTCCGTTTTTTGAAGGCATTACCGTATAGTTATGCAGAAAGGAAGAACTTGCTTGTGAGGTTCAACTTTGATTTGGTCTCTCTCTCGACCTTTCTTTATTATGCTTGAATCCTTGTGACTATCTGCAGCACGGTCGAATAAGATTGAGCATAGGCCATTTACTTCATCAATAGATAGTTTTTGCTCGTACGACCATGTCGATACTAAACGAAATAGACTTTGATTTGGCCTATTCTCTCAACCTTCTTTTTTGTGCTCGAATCCTACTGACTATCTACAACACGGTCATATAAGATTGATCATAGGCTATTTACTCCATCGGTAGATAGTTTTTGCTTGTACAACCATATCGATACTAAACAAAAGAGACTTTGATTTGGTCTATTCTCTCAACCTTAGTTTTTATGCTTGAATCCTTCTGACTATCTGCAGCACGGTCAAGTAAGATTGATCATAGGCTATTTACTTCATCAATAGATAGTTTTTGCTCGTACGACCGTATCGAGACATTATTTATTGTTATCAGCGGAGGCCGTCGTTCCGTTGCAACAAATTGTGTTACTGTCTGTAAAGAACTTTGTTGTTCTAATCTTAGCTTTATGTCTAATATCACTCTGTTGTTGACTCATATGCTAGTTAAATGCGGCCAGGCTACATGGAAACAAGAGAAAATGAGCAAAGGAGGAAGTCCTTGATTCAGGGCAGACACTGTTAGAGAAAGGGGAAGAACAGTTTAAAAGTTTGCTATGAAATCTGAAAGGAAGGGAAGGATTTGAGGCTTAAAGAGGTGTAGCATCATGAGTTTTGTTATGAACAAAGGTTGATGAGCTGAAAATTATATGTAGCATTTGTTTAGATCTGAGAAATTAATGTATTGTAGGGGATTATGAGTTTATGCAGCTTTTGTAGTTTTGTTAATCTTGCATATTGGTTTGACTTTTAGGTGATTTATGTCTATTGGTTCTT

mRNA sequence

ATGGAAGTTTGGATGGTGCAGGGTGCAAAACCTGGAGTTATGATGATCAGAGGCCATACTGGTGTGCTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACCCTTAAATGTCACAAATTCAAATTTGGTACGACATCAACTTTTCAAACGTCTCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGTTACAGTACTCTCGTGGTGATAGGAGAACAGTATCCAAATCTCTGCATTCTACTATTACATCAAAGCCTTACAGTTCTAAAGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGACAGGAAAATCGTGCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTATTGTTCCTGATGAACTTGATGGATTGGAGCTTCCAGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAACTAGGACTTACCATTGAAGATATAAATAACTACCCCCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGGTACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCCAGCGTCGTTGTGGACCTTGGTCCAGTAGTCAAATATCTTCAGGGCATGGATATTAAACCAAGTGATATCCCGCGTGTTCTTGAGAGATATCCAGAAGTATTGGGGTTTAAGCTCGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATCGGAGTGGCAAGAAGAGAAATCGGAGGGGTTTTAACCAAGTACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTCGTAGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCCGTGGCTAGGTTAATAGAGAAACGACCACACATTCTCGGGTTCGGATTGGAAAAAAGGGTCAAACCCAACATCCAATTGCTCTTGGAGTTTAATGTGAGAGAAGCATATCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAACAATAACTTCGGCACTATAATTGAAAAGATGCCACAAGTTGTTAGCCTTAGCAGTTCGGCTGTGAACAGCCATGTCGATTTCTTAAAAAGTTGTGGGTTTTCCTTGCAGCAAGTAAAGAACATGGTTATAGGTTGTCCCCAGTTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCGAAAGGAGATGGGAAGGCCTTTAGACGATCTGGTCGCTTTTCCTGCGTTCTTTACGTATGGTCTGGAGTCCACAATAAAGCCTAGACATAGGAAGGTTGTACAGAAGGGAGTTACCTGTTCTCTTTCATGGCTCCTCAATTGTTCCGATGAAAAGTTCGCTGAAAGGATGACCTACGACACCATAGATATGGAGGAGATGGAAACTGCACCAACGTTCGATATGAGTTCTCTTACACAACCCCGGTATGATGAATCGGATTCTGACTATGAAGAGGACAGCGAGGAGGAGACTTAACGGGCTATTGTCTTGGCTTTGGAAATGGTTTCGACTGGAGGGGAGTGGTTATTTTTGCCATTTTATGGATCTCGTTAGAGTCGGCAACAAGTTTTGAAAAGTTAAATGCGGCCAGGCTACATGGAAACAAGAGAAAATGAGCAAAGGAGGAAGTCCTTGATTCAGGGCAGACACTGTTAGAGAAAGGGGAAGAACAGTTTAAAAGTTTGCTATGAAATCTGAAAGGAAGGGAAGGATTTGAGGCTTAAAGAGGTGTAGCATCATGAGTTTTGTTATGAACAAAGGTTGATGAGCTGAAAATTATATGTAGCATTTGTTTAGATCTGAGAAATTAATGTATTGTAGGGGATTATGAGTTTATGCAGCTTTTGTAGTTTTGTTAATCTTGCATATTGGTTTGACTTTTAGGTGATTTATGTCTATTGGTTCTT

Coding sequence (CDS)

ATGGAAGTTTGGATGGTGCAGGGTGCAAAACCTGGAGTTATGATGATCAGAGGCCATACTGGTGTGCTAAAACCTAATTTTTCCATCATGTTACTCGAGATGCCTACCCTTAAATGTCACAAATTCAAATTTGGTACGACATCAACTTTTCAAACGTCTCCTAACCATGAGAAAAGGAGGGGTTTGATTACAAAGTTACAGTACTCTCGTGGTGATAGGAGAACAGTATCCAAATCTCTGCATTCTACTATTACATCAAAGCCTTACAGTTCTAAAGTGGGTAGAAAAGAGGGAAGTGCTTCATCGTTATATAGTCGCCCTAGCTTAGTGGAAATGAAGAATGTGAGACAGGAAAATCGTGCAAAGGTTTACGAGTTCTTGCGTGGAATTGGTATTGTTCCTGATGAACTTGATGGATTGGAGCTTCCAGTAACAGTTGATGTTATGAAGGAACGTGTCGATTTTCTTCTCAAACTAGGACTTACCATTGAAGATATAAATAACTACCCCCTTGTTCTTGGCTGCAGTGTTAAGAAAAATATGGTACCAGTACTTGATTACCTTGGTAAATTGGGTGTTAGGAAATCTACTTTCACCGAGTTTTTAAGAAGGTATCCGCAAGTCCTCCATTCCAGCGTCGTTGTGGACCTTGGTCCAGTAGTCAAATATCTTCAGGGCATGGATATTAAACCAAGTGATATCCCGCGTGTTCTTGAGAGATATCCAGAAGTATTGGGGTTTAAGCTCGAGGGAACCATGAGCACTTCAGTGGCATACTTGGTAGGAATCGGAGTGGCAAGAAGAGAAATCGGAGGGGTTTTAACCAAGTACCCTGAAATTTTGGGAATGAGGGTTGCTCGGGTAATCAAGCCTTTCGTAGAATATCTTGAAAGTTTGGGAATTCCAAGATTAGCCGTGGCTAGGTTAATAGAGAAACGACCACACATTCTCGGGTTCGGATTGGAAAAAAGGGTCAAACCCAACATCCAATTGCTCTTGGAGTTTAATGTGAGAGAAGCATATCTTTCTTCTATAGTTGCACAGTATGCCGAGATCATAGGAATGGACCTTGAGACTAAGCTTCCAAGTCAAAGGAACTTACTAAAATCAATAATCGAATTGGATAACAATAACTTCGGCACTATAATTGAAAAGATGCCACAAGTTGTTAGCCTTAGCAGTTCGGCTGTGAACAGCCATGTCGATTTCTTAAAAAGTTGTGGGTTTTCCTTGCAGCAAGTAAAGAACATGGTTATAGGTTGTCCCCAGTTGCTTGCTTTGAATCTTGACATAATGAAACACAGCTTTCAGTTCTTCCGAAAGGAGATGGGAAGGCCTTTAGACGATCTGGTCGCTTTTCCTGCGTTCTTTACGTATGGTCTGGAGTCCACAATAAAGCCTAGACATAGGAAGGTTGTACAGAAGGGAGTTACCTGTTCTCTTTCATGGCTCCTCAATTGTTCCGATGAAAAGTTCGCTGAAAGGATGACCTACGACACCATAGATATGGAGGAGATGGAAACTGCACCAACGTTCGATATGAGTTCTCTTACACAACCCCGGTATGATGAATCGGATTCTGACTATGAAGAGGACAGCGAGGAGGAGACTTAA

Protein sequence

MEVWMVQGAKPGVMMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRRTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTEFLRRYPQVLHSSVVVDLGPVVKYLQGMDIKPSDIPRVLERYPEVLGFKLEGTMSTSVAYLVGIGVARREIGGVLTKYPEILGMRVARVIKPFVEYLESLGIPRLAVARLIEKRPHILGFGLEKRVKPNIQLLLEFNVREAYLSSIVAQYAEIIGMDLETKLPSQRNLLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET
Homology
[Close]
BLAST of Carg23262 vs. NCBI nr
Match: XP_022938209.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938210.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_022938211.1 transcription termination factor MTERF4, chloroplastic [Cucurbita moschata])

HSP 1 Score: 623.6 bits (1607), Expect = 6.1e-175
Identity = 518/524 (98.85%), Postives = 521/524 (99.43%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           MMIRGHTGV+KPNFSIMLLEMPTLKCHKFKF TTSTFQTSPNHEKRRGLITKLQYSRGD 
Sbjct: 1   MMIRGHTGVVKPNFSIMLLEMPTLKCHKFKFDTTSTFQTSPNHEKRRGLITKLQYSRGDW 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
           RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV
Sbjct: 61  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           LDN+NFGTIIEKMPQVVSLSSSAVNSHVD LKSCGFSLQQVKNMVIGCPQLLALNLDIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDCLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
           HSFQFF+KEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA
Sbjct: 421 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET
Sbjct: 481 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]
BLAST of Carg23262 vs. NCBI nr
Match: XP_023538106.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023538107.1 transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 623.2 bits (1606), Expect = 8.0e-175
Identity = 518/524 (98.85%), Postives = 521/524 (99.43%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           MMIRGHTGV+KPNFSIMLLEMPTLKC KFKF TTSTFQTSPNHEKRRGLITKLQYSRGDR
Sbjct: 1   MMIRGHTGVVKPNFSIMLLEMPTLKCQKFKFITTSTFQTSPNHEKRRGLITKLQYSRGDR 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
           RTVSKSLHSTITSKPYSSKV RKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV
Sbjct: 61  RTVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           LDN+NFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
           HSFQFF+KEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA
Sbjct: 421 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET
Sbjct: 481 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 524

[Close]
BLAST of Carg23262 vs. NCBI nr
Match: XP_022965673.1 (transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965674.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_022965675.1 transcription termination factor MTERF4, chloroplastic [Cucurbita maxima])

HSP 1 Score: 614.8 bits (1584), Expect = 2.8e-172
Identity = 511/524 (97.52%), Postives = 517/524 (98.66%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           MMIRGHTGV+KPNFSIMLLEMPTLKCHKFKFGTTSTFQ SPNHEKR  LITKLQYSRGDR
Sbjct: 1   MMIRGHTGVVKPNFSIMLLEMPTLKCHKFKFGTTSTFQASPNHEKRGSLITKLQYSRGDR 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
           +TVSKSLHSTITSKPYSSKV RKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV
Sbjct: 61  KTVSKSLHSTITSKPYSSKVSRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVTVDVMKERVDFLLKLGL IEDINNYPLVLGCSVKKNMVPVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLAIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           LDN+NFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
           HSFQFF+KEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVV KG+TCSLSWLLNCSDEKFA
Sbjct: 421 HSFQFFQKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVHKGITCSLSWLLNCSDEKFA 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERMTYDTIDMEEMETAP+FDMSSLTQPRYDESDSDYEED EEET
Sbjct: 481 ERMTYDTIDMEEMETAPSFDMSSLTQPRYDESDSDYEEDGEEET 524

[Close]
BLAST of Carg23262 vs. NCBI nr
Match: XP_022156431.1 (transcription termination factor MTERF4, chloroplastic [Momordica charantia])

HSP 1 Score: 555.8 bits (1431), Expect = 1.6e-154
Identity = 480/524 (91.60%), Postives = 498/524 (95.04%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           MMIR H GV+KPNFSI++ +MPTLKC KF F TTS FQT  N ++RRGLIT+LQYS GDR
Sbjct: 1   MMIRRHAGVVKPNFSIIVPKMPTLKCCKFTFTTTSIFQTPSNRDRRRGLITRLQYSDGDR 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
           RTVSKSLHSTITSKP S++VGRKEGSASSLYS PSLVEMKNVR ENRAKVYEFL GIGIV
Sbjct: 61  RTVSKSLHSTITSKPSSTRVGRKEGSASSLYSHPSLVEMKNVRLENRAKVYEFLCGIGIV 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LKSIIE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRNLLKSIIE 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           LD++NFGTII KMPQ+VSLSSSAV +HVDFLKSCGFSL QVKNMVIGCPQLLALNLDIMK
Sbjct: 361 LDDDNFGTIIGKMPQIVSLSSSAVINHVDFLKSCGFSLVQVKNMVIGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
           HSFQFF+ EMGRPLDDLV FPAFFTYGLESTIKPRHRKVVQKG+TCSLSWLLNCSDEKFA
Sbjct: 421 HSFQFFQMEMGRPLDDLVTFPAFFTYGLESTIKPRHRKVVQKGITCSLSWLLNCSDEKFA 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERMTYDTIDMEEMETAPTFDM+SL QPR D+SDSDYEEDSEEET
Sbjct: 481 ERMTYDTIDMEEMETAPTFDMNSLIQPRNDDSDSDYEEDSEEET 524

[Close]
BLAST of Carg23262 vs. NCBI nr
Match: XP_004143818.1 (PREDICTED: uncharacterized protein LOC101216006 [Cucumis sativus] >KGN51142.1 hypothetical protein Csa_5G466880 [Cucumis sativus])

HSP 1 Score: 540.8 bits (1392), Expect = 5.2e-150
Identity = 472/524 (90.08%), Postives = 496/524 (94.66%), Query Frame = 0 

Query: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74
           MIRGH GV KPNFS+ML EM TL+CH FKF  T TFQ   NHEKR+GLIT+LQYS GDRR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRR 60

Query: 75  TVSKSLHSTITSKPYSSKVGRKEGS-ASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 134
           TV KSLHSTI+SK YSSKV RKEGS  SSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 61  TVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 135 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 194
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGV 180

Query: 195 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 314
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 374
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKS+IE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSLIE 360

Query: 375 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 434
           LDN+NFGTIIEKMPQVVSLS SAV +HVDFLK+CGFSL QVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 435 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 494
           HSF+FF+ EMGRPL+DL  FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFM 480

Query: 495 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDSEEE+
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEES 524

[Close]
BLAST of Carg23262 vs. TAIR10
Match: AT4G02990.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 332.0 bits (850), Expect = 6.7e-91
Identity = 371/519 (71.48%), Postives = 416/519 (80.15%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKR--RGLITKLQYSRG 73
           M IR   G  KP F ++  E P+    + +  + ST+    NH+KR   G+   +Q +  
Sbjct: 1   MKIRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIA 60

Query: 74  DRRTVSKSLHS---------TITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAK 133
           +RR  S+SL S                            SLYSRPSL++M   +  NRAK
Sbjct: 61  NRRFSSRSLDSPRRXXXXXXXXXXXXXXXXXXXXXXXXKSLYSRPSLLDMNKEKAANRAK 120

Query: 134 VYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMV 193
           VYEFLRGIGIVPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNMV
Sbjct: 121 VYEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMV 180

Query: 194 PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLD 360

Query: 374 XXXXXLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCP 433
                L S I L+  + G++IE+MPQ VSLS S +  H+DFL  CGFS+ Q + MVIGCP
Sbjct: 361 TQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCP 420

Query: 434 QLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLS 493
           Q+LALNL IMK SF++F+KEM RPL DLV FPAFFTYGLEST+KPRH+K+++KG+ CSL+
Sbjct: 421 QVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLA 480

Query: 494 WLLNCSDEKFAERMTYDTIDMEEMETAP-TFDMSSLTQP 521
           W+LNCSDEKF +RM+YDTID+EE+ET P +FDM++L QP
Sbjct: 481 WMLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQP 519

[Close]
BLAST of Carg23262 vs. TAIR10
Match: AT2G44020.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 184.5 bits (467), Expect = 1.7e-46
Identity = 271/428 (63.32%), Postives = 334/428 (78.04%), Query Frame = 0 

Query: 109 LVEMKNVRQENRAKVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINN 168
           +++ K  +  NR K+ ++L+G+GI+ DEL+ +ELP T++VM ERV+FL KLGLTI+DIN 
Sbjct: 72  VIQGKKEKLVNRVKICDYLKGLGIITDELESIELPSTIEVMCERVEFLQKLGLTIDDINE 131

Query: 169 YPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 228
           YPL+LGCSV+KN++PVL YL K+G+ +S     XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 132 YPLMLGCSVRKNLIPVLAYLEKIGISRSKLGEFXXXXXXXXXXXXXXXXXXXXXXXXXXX 191

Query: 229 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 288
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 251

Query: 289 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 348
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 252 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 311

Query: 349 XXXXXXXXXXXXXXXXXXXLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCG 408
           XXXXXXXX               +++D   F  ++EKMPQ+VSL  + +   ++FL    
Sbjct: 312 XXXXXXXXVKAKMSTQQYFFSLKLKIDPEGFARVVEKMPQIVSLKQNVIMKPIEFLLGRA 371

Query: 409 FSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPR 468
           F ++ +  MV+ CPQ+L   +++MK+S+ F++ EMGRP+ +LV +P +FTY LES IKPR
Sbjct: 372 FQVEDIAKMVVRCPQILCSRVELMKNSYYFYKTEMGRPMKELVEYPEYFTYSLESRIKPR 431

Query: 469 HRKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSD 528
           ++K+  KG+  SL+W LNCSD++F ER+  + ID +     PTFDM    +    E  +D
Sbjct: 432 YQKLQSKGIRSSLNWFLNCSDQRFEERLQGNFIDPD--TEGPTFDMGGKLEMPGGEIVTD 491

Query: 529 YEEDSEEE 537
            EED  ++
Sbjct: 492 EEEDESDD 497

[Close]
BLAST of Carg23262 vs. TAIR10
Match: AT2G21710.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 79.7 bits (195), Expect = 6.0e-15
Identity = 46/160 (28.75%), Postives = 81/160 (50.62%), Query Frame = 0 

Query: 378 NFGTIIEKMPQVVSLS-SSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSF 437
           + G +I   P ++  S  + +  ++ +  S G    Q+  M+   P LL  N+D ++  +
Sbjct: 477 DIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKY 536

Query: 438 QFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAERM 497
           ++ R+ M RPL DL+ FP FF+Y LE  I PRH  +V+  V   L ++L C+DE+F  R+
Sbjct: 537 RYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRV 596

Query: 498 TYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 537
                  E  E     + S  +     + +  + +++EEE
Sbjct: 597 RDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEEE 636

[Close]
BLAST of Carg23262 vs. TAIR10
Match: AT5G54180.1 (plastid transcriptionally active 15)

HSP 1 Score: 62.4 bits (150), Expect = 9.9e-10
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 386 MPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGR 445
           M  V   SS  +   +    S G S + +  M    PQ+L  N   ++   ++  + MGR
Sbjct: 381 MGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGR 440

Query: 446 PLDDLVAFPAFFTYGLESTIKPRH-RKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDM 504
            +++L+AFPAF  Y L+S IK R+  K+  +G   SL+ LL  S E+F++    D I+M
Sbjct: 441 EVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSK--AADNIEM 497

[Close]
BLAST of Carg23262 vs. TAIR10
Match: AT3G18870.1 (Mitochondrial transcription termination factor family protein)

HSP 1 Score: 61.6 bits (148), Expect = 1.7e-09
Identity = 35/121 (28.93%), Postives = 60/121 (49.59%), Query Frame = 0 

Query: 373 ELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNL-DI 432
           EL   N     +    V++     + + + FLKS GF  ++   +    P +   ++ D 
Sbjct: 148 ELGVRNLNRASKTNAHVLNTRVEKLRAKMRFLKSIGFEHEEAARVCGRIPAIFGYSVEDN 207

Query: 433 MKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEK 492
           ++  F+F   +M R L++L  FP +F + L   I+PRH  + +K V  SLS +L   D+K
Sbjct: 208 LRPKFEFLVYDMERELEELKKFPQYFAFSLGKRIRPRHWHLKKKNVRVSLSRMLMWGDQK 267

[Close]
BLAST of Carg23262 vs. Swiss-Prot
Match: sp|Q9ZT96|MTEF4_ARATH (Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF4 PE=1 SV=1)

HSP 1 Score: 332.0 bits (850), Expect = 1.2e-89
Identity = 371/519 (71.48%), Postives = 416/519 (80.15%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKR--RGLITKLQYSRG 73
           M IR   G  KP F ++  E P+    + +  + ST+    NH+KR   G+   +Q +  
Sbjct: 1   MKIRFCNGFTKPGFLLVHFEPPSFFAVRSRSLSDSTYGNLCNHKKRPGTGIGLTVQCAIA 60

Query: 74  DRRTVSKSLHS---------TITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAK 133
           +RR  S+SL S                            SLYSRPSL++M   +  NRAK
Sbjct: 61  NRRFSSRSLDSPRRXXXXXXXXXXXXXXXXXXXXXXXXKSLYSRPSLLDMNKEKAANRAK 120

Query: 134 VYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMV 193
           VYEFLRGIGIVPDELDGLELPVT DVMKERV+FL KLGLTIEDINNYPLVLGCSVKKNMV
Sbjct: 121 VYEFLRGIGIVPDELDGLELPVTADVMKERVEFLHKLGLTIEDINNYPLVLGCSVKKNMV 180

Query: 194 PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 PVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLD 360

Query: 374 XXXXXLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCP 433
                L S I L+  + G++IE+MPQ VSLS S +  H+DFL  CGFS+ Q + MVIGCP
Sbjct: 361 TQRKLLCSAIHLNPEDLGSLIERMPQFVSLSESPMLKHIDFLTKCGFSIDQTREMVIGCP 420

Query: 434 QLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLS 493
           Q+LALNL IMK SF++F+KEM RPL DLV FPAFFTYGLEST+KPRH+K+++KG+ CSL+
Sbjct: 421 QVLALNLGIMKLSFEYFQKEMKRPLQDLVDFPAFFTYGLESTVKPRHKKIIKKGIKCSLA 480

Query: 494 WLLNCSDEKFAERMTYDTIDMEEMETAP-TFDMSSLTQP 521
           W+LNCSDEKF +RM+YDTID+EE+ET P +FDM++L QP
Sbjct: 481 WMLNCSDEKFEQRMSYDTIDIEEVETDPSSFDMNTLMQP 519

[Close]
BLAST of Carg23262 vs. Swiss-Prot
Match: sp|B6TGN4|MTEF4_MAIZE (Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MTERF4 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-64
Identity = 310/417 (74.34%), Postives = 351/417 (84.17%), Query Frame = 0 

Query: 100 ASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKL 159
           +SSLY+RPSL++M+  R   RA V  FL  +G+ P EL GLELPVTVDVM+ER +FL  L
Sbjct: 54  SSSLYARPSLLDMERDRATRRADVDAFLTSLGVDPGELAGLELPVTVDVMRERAEFLGSL 113

Query: 160 GLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXX 219
           GLT ED+  YPL LGCSV+KNMVPVLDYLGKLGVR+      XXXXXXXXXXXXXXXXXX
Sbjct: 114 GLTQEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRRDALPDLXXXXXXXXXXXXXXXXXX 173

Query: 220 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 279
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 174 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 233

Query: 280 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 339
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 234 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 293

Query: 340 XXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNS 399
           XXXXXXXXXXXXXXXXXXXXXX       +S I +   +FG ++E+MPQ +SL  +AV  
Sbjct: 294 XXXXXXXXXXXXXXXXXXXXXXVAQQSLFESSILVSREDFGRVLERMPQAISLGRAAVLK 353

Query: 400 HVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTY 459
           HV+FL +CGF L QV  MV+ CPQLLALN+DIM+ +F++F+ EM R L++LV FPAFFTY
Sbjct: 354 HVNFLTACGFMLSQVSKMVVACPQLLALNIDIMRMNFEYFKNEMERDLEELVEFPAFFTY 413

Query: 460 GLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMSS 517
           G+EST++PRH  V +KG+TCSL+WLLNCSD KF ERM YDTI +EEME   + DM++
Sbjct: 414 GIESTVRPRHEMVSRKGLTCSLAWLLNCSDAKFDERMKYDTIGVEEMEREDSSDMNA 470

[Close]
BLAST of Carg23262 vs. Swiss-Prot
Match: sp|Q6AUK6|MTEF4_ORYSJ (Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0404000 PE=2 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-64
Identity = 314/416 (75.48%), Postives = 351/416 (84.38%), Query Frame = 0 

Query: 103 LYSRPSLVEMKNVRQENRAKVYEFLRGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLT 162
           LY+RPSL++M+  R   RA V  FL  +G+ P EL GLELP TVDVM+ERV+FL  L L+
Sbjct: 66  LYARPSLLDMERGRAARRADVDAFLASLGVDPGELAGLELPATVDVMRERVEFLHSLDLS 125

Query: 163 IEDINNYPLVLGCSVKKNMVPVLDYLGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXX 222
            ED+  YPL LGCSV+KNMVPVLDYLGKLGVR+     XXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126 NEDLAAYPLALGCSVRKNMVPVLDYLGKLGVRQDALPDXXXXXXXXXXXXXXXXXXXXXX 185

Query: 223 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 282
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 245

Query: 283 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 342
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 246 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 305

Query: 343 XXXXXXXXXXXXXXXXXXXXXXXXXLKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVD 402
           XXXXXXXXXXXXXXXXXXXX      +S I + + +FG +IE+MPQ +SL  +AV  HV+
Sbjct: 306 XXXXXXXXXXXXXXXXXXXXTQQSLFESSILVSSEDFGRVIERMPQAISLGRTAVLKHVN 365

Query: 403 FLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLE 462
           FL SCGF L QV  MV+ CPQLLALN+DIMK SF++F+ EM R L++LV FPAFFTYGLE
Sbjct: 366 FLTSCGFLLSQVSKMVVACPQLLALNMDIMKMSFEYFQNEMERDLEELVEFPAFFTYGLE 425

Query: 463 STIKPRHRKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDMEEMETAPTFDMSSLT 519
           ST++PRH  V +KG TCSL+WLLNCSD KF ERM YDTI +EEME   +FD ++L+
Sbjct: 426 STVRPRHEMVAKKGFTCSLAWLLNCSDAKFDERMKYDTIGIEEMEVDNSFDTNTLS 481

[Close]
BLAST of Carg23262 vs. Swiss-Prot
Match: sp|F4IHL3|MTEF2_ARATH (Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF2 PE=3 SV=1)

HSP 1 Score: 79.7 bits (195), Expect = 1.1e-13
Identity = 46/160 (28.75%), Postives = 81/160 (50.62%), Query Frame = 0 

Query: 378 NFGTIIEKMPQVVSLS-SSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSF 437
           + G +I   P ++  S  + +  ++ +  S G    Q+  M+   P LL  N+D ++  +
Sbjct: 477 DIGKVIAMDPALLGCSIGTKLEPNMRYYISLGIRFYQLGEMIADFPMLLRYNVDNLRPKY 536

Query: 438 QFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFAERM 497
           ++ R+ M RPL DL+ FP FF+Y LE  I PRH  +V+  V   L ++L C+DE+F  R+
Sbjct: 537 RYLRRTMIRPLQDLIEFPRFFSYSLERRIIPRHTIMVENRVNFKLRYMLACTDEEFERRV 596

Query: 498 TYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 537
                  E  E     + S  +     + +  + +++EEE
Sbjct: 597 RDKVERRERFEAGLDSEDSQPSDENISDQEIAFSDEAEEE 636

[Close]
BLAST of Carg23262 vs. Swiss-Prot
Match: sp|Q9FK23|MTEF8_ARATH (Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MTERF8 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.8e-08
Identity = 39/119 (32.77%), Postives = 62/119 (52.10%), Query Frame = 0 

Query: 386 MPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMKHSFQFFRKEMGR 445
           M  V   SS  +   +    S G S + +  M    PQ+L  N   ++   ++  + MGR
Sbjct: 381 MGAVTRTSSDNMQRVIGLYLSYGLSFEDILAMSTKHPQVLQYNYTSLEEKLEYLIEYMGR 440

Query: 446 PLDDLVAFPAFFTYGLESTIKPRH-RKVVQKGVTCSLSWLLNCSDEKFAERMTYDTIDM 504
            +++L+AFPAF  Y L+S IK R+  K+  +G   SL+ LL  S E+F++    D I+M
Sbjct: 441 EVEELLAFPAFLGYKLDSRIKHRYEEKLKSRGENMSLNKLLTVSAERFSK--AADNIEM 497

[Close]
BLAST of Carg23262 vs. TrEMBL
Match: tr|A0A0A0KRV7|A0A0A0KRV7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=4 SV=1)

HSP 1 Score: 540.8 bits (1392), Expect = 3.5e-150
Identity = 472/524 (90.08%), Postives = 496/524 (94.66%), Query Frame = 0 

Query: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74
           MIRGH GV KPNFS+ML EM TL+CH FKF  T TFQ   NHEKR+GLIT+LQYS GDRR
Sbjct: 1   MIRGHAGVAKPNFSLMLFEMSTLECHNFKFTATRTFQMPYNHEKRKGLITQLQYSHGDRR 60

Query: 75  TVSKSLHSTITSKPYSSKVGRKEGS-ASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 134
           TV KSLHSTI+SK YSSKV RKEGS  SSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 61  TVFKSLHSTISSKSYSSKVDRKEGSIGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 135 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 194
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPL+LGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGV 180

Query: 195 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 314
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 374
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKS+IE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSLIE 360

Query: 375 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 434
           LDN+NFGTIIEKMPQVVSLS SAV +HVDFLK+CGFSL QVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQVVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 435 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 494
           HSF+FF+ EMGRPL+DL  FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFM 480

Query: 495 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDSEEE+
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLIQPRNDESDSEYEEDSEEES 524

[Close]
BLAST of Carg23262 vs. TrEMBL
Match: tr|A0A1S3CR33|A0A1S3CR33_CUCME (transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103503367 PE=4 SV=1)

HSP 1 Score: 537.7 bits (1384), Expect = 2.9e-149
Identity = 472/524 (90.08%), Postives = 495/524 (94.47%), Query Frame = 0 

Query: 15  MIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDRR 74
           MIRGH GV+KPN S ML EM TL+CH FKF  T TF TS  HEKRR L T+LQYS GDRR
Sbjct: 1   MIRGHAGVVKPNVSFMLFEMSTLECHNFKFTATPTFLTSCIHEKRRCLTTQLQYSHGDRR 60

Query: 75  TVSKSLHSTITSKPYSSKVGRKEGSA-SSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 134
           TV KSLHSTI+SKPYSSKVGRK GS+ SSLYSRPSLVEMKNVR ENR+KVYEFLRGIG+V
Sbjct: 61  TVFKSLHSTISSKPYSSKVGRKGGSSGSSLYSRPSLVEMKNVRLENRSKVYEFLRGIGVV 120

Query: 135 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 194
           PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 195 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 254
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 255 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 314
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 315 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 374
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKS+IE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSLIE 360

Query: 375 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 434
           LDN+NFGTIIEKMPQ+VSLS SAV +HVDFLK+CGFSL QVKNMVIGCPQLLALN+DIMK
Sbjct: 361 LDNDNFGTIIEKMPQIVSLSRSAVINHVDFLKTCGFSLLQVKNMVIGCPQLLALNIDIMK 420

Query: 435 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 494
           HSF+FF+ EMGRPL+DL  FPAFFTYGLESTIKPRHRKVVQKG++CSLSWLLNC+DEKF 
Sbjct: 421 HSFEFFQMEMGRPLEDLATFPAFFTYGLESTIKPRHRKVVQKGISCSLSWLLNCADEKFV 480

Query: 495 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEET 538
           ERM+YDTIDMEEMET PTFDM+SL QPR DESDS+YEEDSEEET
Sbjct: 481 ERMSYDTIDMEEMETTPTFDMNSLVQPRNDESDSEYEEDSEEET 524

[Close]
BLAST of Carg23262 vs. TrEMBL
Match: tr|M5W7W6|M5W7W6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G247800 PE=4 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 1.3e-109
Identity = 398/522 (76.25%), Postives = 455/522 (87.16%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           M IR + G+ KP+F ++  E+P L     +F +  TF+   + EK  G+IT+ QYS  DR
Sbjct: 1   MKIRSYAGITKPSFLLVHPELPALTSRNPQFTSLFTFRIPCSREKLTGMITRSQYSVADR 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
           R+ ++   S++++K  ++++GR++G +SSLYSRPSL++MKN R ENRA+VYEFLRGIGIV
Sbjct: 61  RSATRYGDSSVSNK-NTNRLGRRQGGSSSLYSRPSLLDMKNDRMENRARVYEFLRGIGIV 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVTV+VM+ERVDFL KLGLTIED+NNYPLVLGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTVEVMRERVDFLHKLGLTIEDLNNYPLVLGCSVKKNMIPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    LKS+I+
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQSSLKSVID 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           L    FG ++EKMPQVVSLS   +  HVDFLK+CGFSL+QV+ MV GCPQLLALNLDIMK
Sbjct: 361 LSPEEFGGVVEKMPQVVSLSDRPMMKHVDFLKNCGFSLEQVRKMVAGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
            SF FF+ EM RPLDDLV FPAFFTYGLESTIKPRH+ V +KG+ CSL WLLNCSD+KFA
Sbjct: 421 LSFDFFQTEMQRPLDDLVDFPAFFTYGLESTIKPRHKMVSKKGLKCSLGWLLNCSDDKFA 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEE 536
           +RM YDTI+MEEME  P+FDM++LT+PR D+S SDY++  ++
Sbjct: 481 QRMDYDTIEMEEMELLPSFDMNTLTEPRSDDSGSDYDDSDDD 521

[Close]
BLAST of Carg23262 vs. TrEMBL
Match: tr|A0A2I4F0X5|A0A2I4F0X5_9ROSI (transcription termination factor MTERF4, chloroplastic OS=Juglans regia OX=51240 GN=LOC108994510 PE=4 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 8.6e-109
Identity = 397/523 (75.91%), Postives = 447/523 (85.47%), Query Frame = 0 

Query: 14  MMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQYSRGDR 73
           M IR + G+ KP   ++  ++P L   K K  + ST +   NH +R GL+T+ QYS  DR
Sbjct: 1   MTIRSYAGIRKPGLLLVHSDVPVLTVLKPKVSSLSTLKVPGNHGRRVGLVTRFQYSVADR 60

Query: 74  RTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFLRGIGIV 133
              S S+ S+   K  ++++GRK+G  SSLYSRPSL EMKN R  NRA+VYEFLRGIGI+
Sbjct: 61  TFASSSVDSS-RFKQGTARLGRKQGGPSSLYSRPSLSEMKNERMANRARVYEFLRGIGII 120

Query: 134 PDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDYLGKLGV 193
           PDELDGLELPVT +VM+ERVDFL KLGLTIEDINNYPL+LGCSVKKNM+PVLDYLGKLGV
Sbjct: 121 PDELDGLELPVTAEVMRERVDFLRKLGLTIEDINNYPLILGCSVKKNMIPVLDYLGKLGV 180

Query: 194 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 RKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 254 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 313
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 314 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLKSIIE 373
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       L S+I+
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLSQQSLLNSVID 360

Query: 374 LDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLALNLDIMK 433
           +   +FG ++EKMPQVVSLS++ V  HVDFLK CGFSL+QV+ MV+GCPQLLALNLDIMK
Sbjct: 361 IGPEDFGRVLEKMPQVVSLSNAPVIKHVDFLKICGFSLEQVRTMVVGCPQLLALNLDIMK 420

Query: 434 HSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNCSDEKFA 493
            +F +++ EM RPLDDLV FPAFFTYGLESTIKPRHR V +KG+ CSL+WLLNCSD KF 
Sbjct: 421 LNFDYYQMEMKRPLDDLVMFPAFFTYGLESTIKPRHRVVAKKGLKCSLAWLLNCSDVKFD 480

Query: 494 ERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 537
           ERMTYDTIDMEEMET  +F+M++L +PR DES SDY+EDSE++
Sbjct: 481 ERMTYDTIDMEEMETEQSFNMNTLMEPRSDESASDYDEDSEDD 522

[Close]
BLAST of Carg23262 vs. TrEMBL
Match: tr|A0A1R3I5C0|A0A1R3I5C0_COCAP (Mitochodrial transcription termination factor-related protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14815 PE=4 SV=1)

HSP 1 Score: 402.9 bits (1034), Expect = 1.1e-108
Identity = 402/529 (75.99%), Postives = 451/529 (85.26%), Query Frame = 0 

Query: 8   GAKPGVMMIRGHTGVLKPNFSIMLLEMPTLKCHKFKFGTTSTFQTSPNHEKRRGLITKLQ 67
           G    VM IR   G+ K +F +   E+P L  HK K   TST     N E + GL+T++ 
Sbjct: 5   GVNCEVMKIRSCAGIAKSSFLLAHSELPALTFHKPKLTWTSTLNIPSNCESKFGLVTRVH 64

Query: 68  YSRGDRRTVSKSLHSTITSKPYSSKVGRKEGSASSLYSRPSLVEMKNVRQENRAKVYEFL 127
               + RT S +  S   SK  + ++G+K+G +SSLYSRPSL EMKN R   RAKVYEFL
Sbjct: 65  CFVAN-RTYSSTSVSPSRSKRNNVRLGQKQGKSSSLYSRPSLAEMKNDRIAIRAKVYEFL 124

Query: 128 RGIGIVPDELDGLELPVTVDVMKERVDFLLKLGLTIEDINNYPLVLGCSVKKNMVPVLDY 187
           RG+GI+PDELDGLELPVTV+VMKER+DFL KLGLTIEDINNYPLVLGCSVKKNM+PVLDY
Sbjct: 125 RGLGIIPDELDGLELPVTVEVMKERIDFLHKLGLTIEDINNYPLVLGCSVKKNMIPVLDY 184

Query: 188 LGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
           LGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 185 LGKLGVRKSTFTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244

Query: 248 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 307
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 304

Query: 308 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 367
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 305 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGQRSL 364

Query: 368 LKSIIELDNNNFGTIIEKMPQVVSLSSSAVNSHVDFLKSCGFSLQQVKNMVIGCPQLLAL 427
           L+SII++ + +FGT++EKMPQVVSLS+++V  HVDFLK CGFSLQQV+ MV+GCPQ+LAL
Sbjct: 365 LQSIIDMGHEDFGTVVEKMPQVVSLSNTSVVKHVDFLKDCGFSLQQVRTMVVGCPQVLAL 424

Query: 428 NLDIMKHSFQFFRKEMGRPLDDLVAFPAFFTYGLESTIKPRHRKVVQKGVTCSLSWLLNC 487
           NLDIMK SF +F+ +M RPLDDLVAFPAFFTYGLESTIKPR + V +KG  CSLSWLLNC
Sbjct: 425 NLDIMKLSFDYFQMQMQRPLDDLVAFPAFFTYGLESTIKPRDKIVAKKGFKCSLSWLLNC 484

Query: 488 SDEKFAERMTYDTIDMEEMETAPTFDMSSLTQPRYDESDSDYEEDSEEE 537
           SDEKF +RM YD+I+MEEMET P+FDM+SL +PR DESDS+YE+DS++E
Sbjct: 485 SDEKFKDRMNYDSIEMEEMETVPSFDMNSLMEPRSDESDSEYEDDSDDE 532

The following BLAST results are available for this feature:
BLAST of Carg23262 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022938209.16.1e-17598.85transcription termination factor MTERF4, chloroplastic [Cucurbita moschata] >XP_... [more]
XP_023538106.18.0e-17598.85transcription termination factor MTERF4, chloroplastic [Cucurbita pepo subsp. pe... [more]
XP_022965673.12.8e-17297.52transcription termination factor MTERF4, chloroplastic [Cucurbita maxima] >XP_02... [more]
XP_022156431.11.6e-15491.60transcription termination factor MTERF4, chloroplastic [Momordica charantia][more]
XP_004143818.15.2e-15090.08PREDICTED: uncharacterized protein LOC101216006 [Cucumis sativus] >KGN51142.1 hy... [more]
BLAST of Carg23262 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G02990.16.7e-9171.48Mitochondrial transcription termination factor family protein[more]
AT2G44020.11.7e-4663.32Mitochondrial transcription termination factor family protein[more]
AT2G21710.16.0e-1528.75Mitochondrial transcription termination factor family protein[more]
AT5G54180.19.9e-1032.77plastid transcriptionally active 15[more]
AT3G18870.11.7e-0928.93Mitochondrial transcription termination factor family protein[more]
BLAST of Carg23262 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9ZT96|MTEF4_ARATH1.2e-8971.48Transcription termination factor MTERF4, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|B6TGN4|MTEF4_MAIZE2.3e-6474.34Transcription termination factor MTERF4, chloroplastic OS=Zea mays OX=4577 GN=MT... [more]
sp|Q6AUK6|MTEF4_ORYSJ2.3e-6475.48Transcription termination factor MTERF4, chloroplastic OS=Oryza sativa subsp. ja... [more]
sp|F4IHL3|MTEF2_ARATH1.1e-1328.75Transcription termination factor MTERF2, chloroplastic OS=Arabidopsis thaliana O... [more]
sp|Q9FK23|MTEF8_ARATH1.8e-0832.77Transcription termination factor MTERF8, chloroplastic OS=Arabidopsis thaliana O... [more]
BLAST of Carg23262 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0KRV7|A0A0A0KRV7_CUCSA3.5e-15090.08Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G466880 PE=4 SV=1[more]
tr|A0A1S3CR33|A0A1S3CR33_CUCME2.9e-14990.08transcription termination factor MTERF4, chloroplastic OS=Cucumis melo OX=3656 G... [more]
tr|M5W7W6|M5W7W6_PRUPE1.3e-10976.25Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_8G247800 PE=4 SV=1[more]
tr|A0A2I4F0X5|A0A2I4F0X5_9ROSI8.6e-10975.91transcription termination factor MTERF4, chloroplastic OS=Juglans regia OX=51240... [more]
tr|A0A1R3I5C0|A0A1R3I5C0_COCAP1.1e-10875.99Mitochodrial transcription termination factor-related protein OS=Corchorus capsu... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003690double-stranded DNA binding
Vocabulary: INTERPRO
TermDefinition
IPR038538MTERF_sf
IPR003690MTERF
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0005575 cellular_component
molecular_function GO:0003690 double-stranded DNA binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23262-RACarg23262-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003690Transcription termination factor, mitochondrial/chloroplasticSMARTSM00733mt_12coord: 271..302
e-value: 1.1E-4
score: 31.6
coord: 163..194
e-value: 0.0061
score: 25.8
coord: 199..230
e-value: 0.0014
score: 27.9
coord: 100..133
e-value: 1900.0
score: 1.7
coord: 307..338
e-value: 4.7E-4
score: 29.5
coord: 447..478
e-value: 0.068
score: 22.3
coord: 235..266
e-value: 0.0053
score: 26.0
coord: 415..446
e-value: 0.1
score: 21.7
coord: 343..375
e-value: 700.0
score: 5.1
coord: 380..410
e-value: 0.016
score: 24.4
IPR003690Transcription termination factor, mitochondrial/chloroplasticPFAMPF02536mTERFcoord: 185..493
e-value: 5.5E-106
score: 354.0
IPR038538MTERF superfamily, mitochondrial/chloroplasticGENE3DG3DSA:1.25.70.10coord: 253..503
e-value: 3.3E-47
score: 162.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 507..537
NoneNo IPR availablePANTHERPTHR13068CGI-12 PROTEIN-RELATEDcoord: 25..535
NoneNo IPR availablePANTHERPTHR13068:SF24TRANSCRIPTION TERMINATION FACTOR MTERF4, CHLOROPLASTICcoord: 25..535