Carg23237 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23237
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	BOI-related E3 ubiquitin-protein ligase 1
Location	Cucurbita_argyrosperma_scaffold_102 : 349749 .. 351004 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTGTTCAAGCTCAATACCCTTCCAATGTTCTTCTCCATAACAGGTTCCTTAAATTTCCCTCTCTGTTTTCCTCTGTTCTGTTTCTTAATCCGGTTTTTCTCAAGCTTGTTCTCTGGAATTTGCAGAAACATTCAAGATTCCGGCCATGATTATTCATTGCAGCCTCAGCCGGGCGGAGGCGGAGGCGGAGGCGGCGGAGGAGGACGAGGAGGAGATCTTGAACACTCTCATGCTCTGTTCAACAATGGAGGTTGGTTTGAATTTCAGTTTATATGAGTTTTTTTGTATTGACCCATTGAAATTGAAGCGATTTTGATTATGGGTTTTGAATTTGGAAGTCAGGTGGGAATTATTTGAGTAATTTAAGGAAACGAGGAAGAGATGTCTCTGTTTCAGCTCCGATCATCAATCCTCTCTGTTTTCAACCTCAGATTATTGATCTTTCTCAGCTTCATAACCACCACCATCCTTCCAATGTCGTATCCACCGGGCTCCGGTTGTCTTCCGGCGACCAAGGACTTAATCCCCACCACCACACGCCGCCGCAGAATGATGATAATCTTGTTTCTCTCTCTTCCTCTGTTTTCATCTCCGATGACTTTTCGTCTCAAATCAAAGGGCAACGTGATGAAATTGACCAATTCCTTCAAGCCCAGGTATGGATTTGGAAAACCCAGATGGAATTTGTGGAGATAGAGAAGAAAGTTTTGATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGGATTAGGAGGAAGAGCTCCGGCGGGCGTTGGCGGAGAAACGGCATAGGCACTACCGGGAATTGTTGGGGGCGGTGGAGGCAACGGCGGTGAGGAGGTTAAGGGAGAAGGAAGTAGAAGTGGAGAAGGCTACGCGTCGCCACGCGGAGTTGGAAGCACGCGCCGCCAGGCTGAGTATGGAGGCGCAAGCGTGGCAAGAGAAGGCGAGAGCGGAGGAGGCAGCGGCAGCAACGCTGCAGGCTCAGCTGCAGCAGGCGATAATAAAGGGCGCCGGAATCGGCGGAGGAGGAGACTGCACGGCGGAGGATGCGGAGTCGGGTTACGTTGACCCGGACCGAGTCATCGCCGAGTCGGGACCGAGTTGTAAAGCGTGTCGGAAGCGAGTCGCGTCGGTGGTTTTGTTGCCGTGTCGACACTTCTGCATCTGTACGGTTTGCGATCACGTGGTTCGCACGTGTCCGCTTTGTCGGGCCTTGAGGAATTCCAGTGTTGAAGTTTATCTCTCTTGA

mRNA sequence

ATGGCTGTTCAAGCTCAATACCCTTCCAATGTTCTTCTCCATAACAGAAACATTCAAGATTCCGGCCATGATTATTCATTGCAGCCTCAGCCGGGCGGAGGCGGAGGCGGAGGCGGCGGAGGAGGACGAGGAGGAGATCTTGAACACTCTCATGCTCTGTTCAACAATGGAGGTGGGAATTATTTGAGTAATTTAAGGAAACGAGGAAGAGATGTCTCTGTTTCAGCTCCGATCATCAATCCTCTCTGTTTTCAACCTCAGATTATTGATCTTTCTCAGCTTCATAACCACCACCATCCTTCCAATGTCGTATCCACCGGGCTCCGGTTGTCTTCCGGCGACCAAGGACTTAATCCCCACCACCACACGCCGCCGCAGAATGATGATAATCTTGTTTCTCTCTCTTCCTCTGTTTTCATCTCCGATGACTTTTCGTCTCAAATCAAAGGGCAACGTGATGAAATTGACCAATTCCTTCAAGCCCAGGAGGAAGAGCTCCGGCGGGCGTTGGCGGAGAAACGGCATAGGCACTACCGGGAATTGTTGGGGGCGGTGGAGGCAACGGCGGTGAGGAGGTTAAGGGAGAAGGAAGTAGAAGTGGAGAAGGCTACGCGTCGCCACGCGGAGTTGGAAGCACGCGCCGCCAGGCTGAGTATGGAGGCGCAAGCGTGGCAAGAGAAGGCGAGAGCGGAGGAGGCAGCGGCAGCAACGCTGCAGGCTCAGCTGCAGCAGGCGATAATAAAGGGCGCCGGAATCGGCGGAGGAGGAGACTGCACGGCGGAGGATGCGGAGTCGGGTTACGTTGACCCGGACCGAGTCATCGCCGAGTCGGGACCGAGTTGTAAAGCGTGTCGGAAGCGAGTCGCGTCGGTGGTTTTGTTGCCGTGTCGACACTTCTGCATCTGTACGGTTTGCGATCACGTGGTTCGCACGTGTCCGCTTTGTCGGGCCTTGAGGAATTCCAGTGTTGAAGTTTATCTCTCTTGA

Coding sequence (CDS)

ATGGCTGTTCAAGCTCAATACCCTTCCAATGTTCTTCTCCATAACAGAAACATTCAAGATTCCGGCCATGATTATTCATTGCAGCCTCAGCCGGGCGGAGGCGGAGGCGGAGGCGGCGGAGGAGGACGAGGAGGAGATCTTGAACACTCTCATGCTCTGTTCAACAATGGAGGTGGGAATTATTTGAGTAATTTAAGGAAACGAGGAAGAGATGTCTCTGTTTCAGCTCCGATCATCAATCCTCTCTGTTTTCAACCTCAGATTATTGATCTTTCTCAGCTTCATAACCACCACCATCCTTCCAATGTCGTATCCACCGGGCTCCGGTTGTCTTCCGGCGACCAAGGACTTAATCCCCACCACCACACGCCGCCGCAGAATGATGATAATCTTGTTTCTCTCTCTTCCTCTGTTTTCATCTCCGATGACTTTTCGTCTCAAATCAAAGGGCAACGTGATGAAATTGACCAATTCCTTCAAGCCCAGGAGGAAGAGCTCCGGCGGGCGTTGGCGGAGAAACGGCATAGGCACTACCGGGAATTGTTGGGGGCGGTGGAGGCAACGGCGGTGAGGAGGTTAAGGGAGAAGGAAGTAGAAGTGGAGAAGGCTACGCGTCGCCACGCGGAGTTGGAAGCACGCGCCGCCAGGCTGAGTATGGAGGCGCAAGCGTGGCAAGAGAAGGCGAGAGCGGAGGAGGCAGCGGCAGCAACGCTGCAGGCTCAGCTGCAGCAGGCGATAATAAAGGGCGCCGGAATCGGCGGAGGAGGAGACTGCACGGCGGAGGATGCGGAGTCGGGTTACGTTGACCCGGACCGAGTCATCGCCGAGTCGGGACCGAGTTGTAAAGCGTGTCGGAAGCGAGTCGCGTCGGTGGTTTTGTTGCCGTGTCGACACTTCTGCATCTGTACGGTTTGCGATCACGTGGTTCGCACGTGTCCGCTTTGTCGGGCCTTGAGGAATTCCAGTGTTGAAGTTTATCTCTCTTGA

Protein sequence

MAVQAQYPSNVLLHNRNIQDSGHDYSLQPQPGGGGGGGGGGGRGGDLEHSHALFNNGGGNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQAWQEKARAEEAAAATLQAQLQQAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVYLS

Homology

[Close]

BLAST of Carg23237 vs. NCBI nr
Match: XP_022923525.1 (BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 545.8 bits (1405), Expect = 9.9e-152
Identity = 328/328 (100.00%), Postives = 328/328 (100.00%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN
Sbjct: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60

Query: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120
           YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH
Sbjct: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120

Query: 121 HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE 180
           HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE
Sbjct: 121 HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE 180

Query: 181 LLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXX 240
           LLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXX
Sbjct: 181 LLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300
           XXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC
Sbjct: 241 XXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300

Query: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           ICTVCDHVVRTCPLCRALRNSSVEVYLS
Sbjct: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 328

[Close]

BLAST of Carg23237 vs. NCBI nr
Match: XP_022923526.1 (BOI-related E3 ubiquitin-protein ligase 1-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 480.7 bits (1236), Expect = 3.9e-132
Identity = 271/271 (100.00%), Postives = 271/271 (100.00%), Query Frame = 0


Query: 58  GGNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGL 117
           GGNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGL
Sbjct: 50  GGNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGL 109

Query: 118 NPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRH 177
           NPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRH
Sbjct: 110 NPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRH 169

Query: 178 YRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXX 237
           YRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXX
Sbjct: 170 YRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXX 229

Query: 238 XXXXXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCR 297
           XXXXXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCR
Sbjct: 230 XXXXXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCR 289

Query: 298 HFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           HFCICTVCDHVVRTCPLCRALRNSSVEVYLS
Sbjct: 290 HFCICTVCDHVVRTCPLCRALRNSSVEVYLS 320

[Close]

BLAST of Carg23237 vs. NCBI nr
Match: XP_022965101.1 (BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 477.2 bits (1227), Expect = 4.3e-131
Identity = 289/328 (88.11%), Postives = 293/328 (89.33%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLLHNRNIQDSGHDYSLQ       XXXXXXXXXXX   SHALFNNGGGN
Sbjct: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQ-----PQXXXXXXXXXXXLEQSHALFNNGGGN 60

Query: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120
           YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH
Sbjct: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120

Query: 121 HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE 180
                     LVSLSSSVFISD+FSSQIK QRDEIDQFLQ+QEEELRRALAEKRHRHYRE
Sbjct: 121 XXXXXXXXXXLVSLSSSVFISDEFSSQIKVQRDEIDQFLQSQEEELRRALAEKRHRHYRE 180

Query: 181 LLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXX 240
           LLGA+EATAVRRLREKEVEVEKATRRHAE             XXXXXXXXXXXXXXXXXX
Sbjct: 181 LLGAMEATAVRRLREKEVEVEKATRRHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300
           XXX AI+KGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC
Sbjct: 241 XXXQAIMKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300

Query: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           ICTVCDHVVRTCPLCRALRNSSVEVYLS
Sbjct: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 323

[Close]

BLAST of Carg23237 vs. NCBI nr
Match: XP_023552759.1 (BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 472.2 bits (1214), Expect = 1.4e-129
Identity = 298/328 (90.85%), Postives = 300/328 (91.46%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLLHNRNIQDSGHDYSL XXXXXXXXXXXXXXXXXXXXX  ALFNNG GN
Sbjct: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSL-XXXXXXXXXXXXXXXXXXXXXXXALFNNGDGN 60

Query: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120
           YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH
Sbjct: 61  YLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNPH 120

Query: 121 HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE 180
                     LVSLSSSVFIS+DFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE
Sbjct: 121 XXXXXXXXXXLVSLSSSVFISNDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRE 180

Query: 181 LLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXX 240
           LLGAVEATAVRRLREKEVEVEKATRRHAE             XXXXXXXXXXXXXXXXXX
Sbjct: 181 LLGAVEATAVRRLREKEVEVEKATRRHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300
           XXX AI+KGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC
Sbjct: 241 XXXQAIMKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFC 300

Query: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           ICTVCDHVVRTCPLCRALRNSSVEVYLS
Sbjct: 301 ICTVCDHVVRTCPLCRALRNSSVEVYLS 327

[Close]

BLAST of Carg23237 vs. NCBI nr
Match: XP_023552760.1 (BOI-related E3 ubiquitin-protein ligase 1-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.5 bits (1077), Expect = 1.1e-113
Identity = 244/270 (90.37%), Postives = 246/270 (91.11%), Query Frame = 0


Query: 59  GNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLN 118
           GNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLN
Sbjct: 50  GNYLSNLRKRGRDVSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLN 109

Query: 119 PHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHY 178
           PH          LVSLSSSVFIS+DFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHY
Sbjct: 110 PHXXXXXXXXXXLVSLSSSVFISNDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHY 169

Query: 179 RELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXX 238
           RELLGAVEATAVRRLREKEVEVEKATRRHAE             XXXXXXXXXXXXXXXX
Sbjct: 170 RELLGAVEATAVRRLREKEVEVEKATRRHAEXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 229

Query: 239 XXXXXXAIIKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRH 298
           XXXXX AI+KGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRH
Sbjct: 230 XXXXXQAIMKGAGIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRH 289

Query: 299 FCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           FCICTVCDHVVRTCPLCRALRNSSVEVYLS
Sbjct: 290 FCICTVCDHVVRTCPLCRALRNSSVEVYLS 319

[Close]

BLAST of Carg23237 vs. TAIR10
Match: AT1G32740.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 177.6 bits (449), Expect = 1.3e-44
Identity = 118/254 (46.46%), Postives = 143/254 (56.30%), Query Frame = 0


Query: 86  PQIIDLSQLHNHHH-PSNVVSTGLRLSSGDQGLNPHHHTPPQNDDNLVSLSSSVFISDDF 145
           PQ+IDLS LHN++H PSN+V TGLRL SG+       H                   D F
Sbjct: 74  PQVIDLSLLHNYNHPPSNMVHTGLRLFSGEDQAQKISH----------------LSEDVF 133

Query: 146 SSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKAT 205
           ++ I  Q +E+D+FL AQ EELRR LAEKR  HY+ LLGAVE + VR+LREKEVE+E+AT
Sbjct: 134 AAHINRQSEELDEFLHAQAEELRRTLAEKRKMHYKALLGAVEESLVRKLREKEVEIERAT 193

Query: 206 RRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXXXXXXAIIKGAG----------IGG 265
           RRH EL AR ++L  E Q                      A+ + AG             
Sbjct: 194 RRHNELVARDSQLRAEVQVWQERAKAHEDAAASLQSQLQQAVNQCAGGCVSAQDSRAAEE 253

Query: 266 GGDCT----AEDAESGYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVR 325
           G  CT     +DAES YVDP+RV     P+CKACR+R A+VV+LPCRH  IC  CD    
Sbjct: 254 GLLCTTISGVDDAESVYVDPERV---KRPNCKACREREATVVVLPCRHLSICPGCDRTAL 308

[Close]

BLAST of Carg23237 vs. TAIR10
Match: AT4G17680.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 164.9 bits (416), Expect = 8.6e-41
Identity = 133/336 (39.58%), Postives = 170/336 (50.60%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MA+QAQ+PS    +N N Q++  D SLQ                         F   G  
Sbjct: 18  MAIQAQHPSRFFFNNSNGQEAS-DCSLQPQDTPFTN-----------------FTKAG-- 77

Query: 61  YLSNLRKRGRDVSVSAPIINPLCFQP-QIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLNP 120
              + RKR R+V  SA ++NP   +P Q+ID+++L       NVVSTGLRL         
Sbjct: 78  --VDSRKRSREVYSSA-LMNPPPPKPSQVIDITEL--LQKTPNVVSTGLRL--------- 137

Query: 121 HHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYR 180
             H   QN     S      +  D + +IK QRDE+D+F+Q Q EELRR LA+ R R Y 
Sbjct: 138 -FHDQSQNQQQFFS-----SLPGDVTGKIKRQRDELDRFIQTQGEELRRTLADNRERRYV 197

Query: 181 ELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXX 240
           ELL A E    R+LR+KE E+EKATRRHAELEAR A +  EA+                 
Sbjct: 198 ELLCAAEEIVGRKLRKKEAELEKATRRHAELEARVAHIVEEARNWQLRAATREAEVSSLH 257

Query: 241 XXXXXAIIKGA---------GIGGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVAS 300
                AI             G  GG    AEDAES YVDP+R I   GPSC+ CR++ A+
Sbjct: 258 AHLQQAIANRLDTAAKQSTFGEDGGDAEEAEDAESVYVDPER-IELIGPSCRICRRKSAT 312

Query: 301 VVLLPCRHFCICTVCD-HVVRTCPLCRALRNSSVEV 326
           V+ LPC+H  +C  CD   VR CP+C A++ S VEV
Sbjct: 318 VMALPCQHLILCNGCDVGAVRVCPICLAVKTSGVEV 312

[Close]

BLAST of Carg23237 vs. TAIR10
Match: AT1G10650.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 86.3 bits (212), Expect = 3.9e-17
Identity = 65/242 (26.86%), Postives = 110/242 (45.45%), Query Frame = 0


Query: 102 NVVSTGLRLSSGDQGLNPHHHTPPQNDDNLVSLSSSVF--ISDDFSSQIKGQRDEIDQFL 161
           N+VSTGLRLS  D      H++   +    +  +S +F  + D     +  Q+DE DQF+
Sbjct: 102 NLVSTGLRLSYDDD----EHNSSVTSASGSILAASPIFQSLDDSLRIDLHRQKDEFDQFI 161

Query: 162 QAQEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSM 221
           + Q  ++ + + + + RH    L  +E    ++L+EK+ E+    +++ EL  R  +++M
Sbjct: 162 KIQAAQMAKGVRDMKQRHIASFLTTLEKGVSKKLQEKDHEINDMNKKNKELVERIKQVAM 221

Query: 222 EAQXXXXXXXXXXXXXXXXXXXXXXA------IIKGAGIG--GGGDCTAEDAESGYVDPD 281
           EAQ                      A      +I  A  G  G GD   +DA        
Sbjct: 222 EAQNWHYRAKYNESVVNVLKANLQQAMSHNNSVIAAADQGKEGFGDSEIDDAXXXXXXXX 281

Query: 282 RVI-----AESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVY 329
                         CK C  +  SV+++PCRH  +C  CD   + CP+C++L++S V+V+
Sbjct: 282 XXXXXXMGIHQRMRCKMCNVKEVSVLIVPCRHLSLCKECDVFTKICPVCKSLKSSCVQVF 339

[Close]

BLAST of Carg23237 vs. TAIR10
Match: AT1G45976.1 (S-ribonuclease binding protein 1)

HSP 1 Score: 84.7 bits (208), Expect = 1.1e-16
Identity = 66/227 (29.07%), Postives = 111/227 (48.90%), Query Frame = 0


Query: 104 VSTGLRLSSGDQGLNPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQE 163
           VSTGL LS  +  +         + D    LS    + DD   +++ Q  +ID+FL+ Q 
Sbjct: 110 VSTGLGLSLDNARV--------ASSDGSALLS---LVGDDIDRELQRQDADIDRFLKIQG 169

Query: 164 EELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQX 223
           ++LR A+ +K  R  ++ +  +E   V++LREK+ E+E+  R++ ELE R  +L+MEA+ 
Sbjct: 170 DQLRHAILDKIKRGQQKTVSLMEEKVVQKLREKDEELERINRKNKELEVRMEQLTMEAEA 229

Query: 224 XXXXXXXXXXXXXXXXXXXXXAIIKGA-GIGGGGDCTAEDAESGY--VDPDRVIAESGPS 283
                                A  +    I G GD   +D  S +   D      ++   
Sbjct: 230 WQQRAKYNENMIAALNYNLDRAQGRPRDSIEGCGDSEVDDTASCFNGRDNSNNNTKTMMM 289

Query: 284 CKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVYL 328
           C+ C  R   ++LLPC H C+C  C+  + +CPLC++ +   +EVY+
Sbjct: 290 CRFCGVREMCMLLLPCNHMCLCKECERKLSSCPLCQSSKFLGMEVYM 325

[Close]

BLAST of Carg23237 vs. TAIR10
Match: AT1G60610.1 (SBP (S-ribonuclease binding protein) family protein)

HSP 1 Score: 84.0 bits (206), Expect = 1.9e-16
Identity = 62/240 (25.83%), Postives = 114/240 (47.50%), Query Frame = 0


Query: 102 NVVSTGLRLSSGDQGLNPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQA 161
           N+VSTGLRLS  D   N    +   + +  ++      + D+    +  Q DE+DQF++ 
Sbjct: 103 NLVSTGLRLSYDDDERN----SSVTSANGSITTPVYQSLGDNIRLDLNRQNDELDQFIKF 162

Query: 162 QEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEA 221
           + +++ + + + + RH    + A+E    ++L+EK+ E+E   +++ EL  +  ++++EA
Sbjct: 163 RADQMAKGVRDIKQRHVTSFVTALEKDVSKKLQEKDHEIESMNKKNRELVDKIKQVAVEA 222

Query: 222 QXXXXXXXXXXXXXXXXXXXXXXAIIKG---AGIGGG-----------GDCTAEDAESGY 281
           Q                       +  G     +GGG           GD   +D  + Y
Sbjct: 223 QNWHYKAKYNESVVNALKVNLQQVMSHGNDNNAVGGGVADHHQMKEGFGDSEIDDEAASY 282

Query: 282 VDPD-RVIAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVY 327
              +   +  +G  CK C  +  SV+L+PCRH  +C  CD     CP+C++L+ SSV+V+
Sbjct: 283 NYLNIPGMPSTGMRCKLCNVKNVSVLLVPCRHLSLCKDCDVFTGVCPVCQSLKTSSVQVF 338

[Close]

BLAST of Carg23237 vs. Swiss-Prot
Match: sp|O81851|BOI_ARATH (E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-12
Identity = 62/202 (30.69%), Postives = 96/202 (47.52%), Query Frame = 0


Query: 135 SSSVFISDDFSSQIKG-QRDEIDQFLQAQEEELRRALAEKRHRHYRELLGAVEATAVRRL 194
           SS   I+ +  SQI+  Q+ EID+F+  Q E+LR  +  ++    R L  AV+    ++L
Sbjct: 102 SSPSLINVELVSQIQNQQQSEIDRFVAQQTEKLRIEIEARQQTQTRMLASAVQNVIAKKL 161

Query: 195 REKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXXXXXXAIIKGAGIG 254
           +EK+ E+ +    +  L+ R   L +E Q                       + +     
Sbjct: 162 KEKDDEIVRIRNLNWVLQERVKSLYVENQIWRDIAQTNEANANTLRTNLDQVLAQLETFP 221

Query: 255 GGGDCTAEDAES--GYVDPD---RVIAESGPSCKACRKRVASVVLLPCRHFCICTVC--D 314
                  +DAES  G    D     +   G  CK C +R ASV++LPCRH C+CTVC   
Sbjct: 222 TASAVVEDDAESSCGSCCGDGGGEAVTAVGGGCKRCGEREASVLVLPCRHLCLCTVCGGS 281

Query: 315 HVVRTCPLCRALRNSSVEVYLS 329
            ++RTCP+C  + N+SV V +S
Sbjct: 282 ALLRTCPVCDMVMNASVHVNMS 303

[Close]

BLAST of Carg23237 vs. Swiss-Prot
Match: sp|Q9FHE4|BRG1_ARATH (BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG1 PE=1 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 4.7e-12
Identity = 61/204 (29.90%), Postives = 96/204 (47.06%), Query Frame = 0


Query: 132 VSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRELLGAVEATAVR 191
           ++ S +  I  +  SQI+ Q  EID+F+  Q E LR  L  ++    R L  AV+   ++
Sbjct: 90  IAFSPASLIDAELVSQIQQQNSEIDRFVAQQTETLRIELEARQRTQTRMLASAVQNAILK 149

Query: 192 RLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXXXXXXAIIKGAG 251
           +L+ K+ E+ +  + +  L+ R   L +E Q                       + +   
Sbjct: 150 KLKAKDEEIIRMGKLNWVLQERVKNLYVENQIWRDLAQTNEATANNLRSNLEQVLAQVDD 209

Query: 252 IGGGGDC---TAEDAES--GYVDPDRVIAESGPSCKACRKRVASVVLLPCRHFCICTVC- 311
           +          A+DAES  G  D   V A     CK C +  ASV++LPCRH C+CTVC 
Sbjct: 210 LDAFRRPLVEEADDAESSCGSCDGGDVTAVVNGGCKRCGELTASVLVLPCRHLCLCTVCG 269

Query: 312 -DHVVRTCPLCRALRNSSVEVYLS 329
              ++RTCP+C  +  +SV V +S
Sbjct: 270 SSALLRTCPVCDMVMTASVHVNMS 293

[Close]

BLAST of Carg23237 vs. Swiss-Prot
Match: sp|Q9LDD1|BRG3_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=3702 GN=BRG3 PE=1 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 5.8e-10
Identity = 55/211 (26.07%), Postives = 91/211 (43.13%), Query Frame = 0


Query: 138 VFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKRHRHYRELLGAVEATAVRRLREKE 197
           +F+  D SS ++    +ID+ +    E +R  + EKR    R ++ AVE   ++ LR K+
Sbjct: 124 MFLGQDLSSNVQQHHFDIDRLISNHVERMRMEIEEKRKTQGRRIVEAVEQGLMKTLRAKD 183

Query: 198 VEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXXXXXXAII---------- 257
            E+    + +  LE +   L +E Q                       +           
Sbjct: 184 DEINHIGKLNLFLEEKVKSLCVENQIWRDVAQSNEATVNALRSNLQQVLAAVERNRWEEP 243

Query: 258 --------KGAGIGGGGDCTAEDAE-SGYVDPDRVIAESGPS-CKACRKRVASVVLLPCR 317
                      G    GD   E  + +G     + +   G S C++C K  ASV+LLPCR
Sbjct: 244 PTVADDAQSCCGSNDEGDSEEERWKLAGEAQDTKKMCRVGMSMCRSCGKGEASVLLLPCR 303

Query: 318 HFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           H C+C+VC   + TCP+C++ + +S+ V LS
Sbjct: 304 HMCLCSVCGSSLNTCPICKSPKTASLHVNLS 334

[Close]

BLAST of Carg23237 vs. Swiss-Prot
Match: sp|F4IDI6|BRG2_ARATH (Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=3702 GN=BRG2 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 8.3e-09
Identity = 58/214 (27.10%), Postives = 86/214 (40.19%), Query Frame = 0


Query: 143 DFSSQIKGQRDEIDQFLQA---QEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVE 202
           D SS +  Q+ EID+F+     Q E ++  + EKR R  R ++ A+E   V+RLR KE E
Sbjct: 144 DISSHMNQQQHEIDRFVSLHLYQMERVKYEIEEKRKRQARTIMEAIEQGLVKRLRVKEEE 203

Query: 203 VEKATRRHAELEARAARLSMEAQXXXXXXXXXXXXXXXXXXXXXXA------IIKGAGI- 262
            E+  + +  LE R   LS+E Q                             + +GAG+ 
Sbjct: 204 RERIGKVNHALEERVKSLSIENQIWRDLAQTNEATANHLRTNLEHVLAQVKDVSRGAGLE 263

Query: 263 ------------------GGGGDCTAEDAESGYVDPDRVIAESGPSCKACRKRVASVVLL 322
                                                         C+ C +  + V+LL
Sbjct: 264 KNMNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCRNCGEEESCVLLL 323

Query: 323 PCRHFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           PCRH C+C VC   V TCP+C + +N+SV V +S
Sbjct: 324 PCRHLCLCGVCGSSVHTCPICTSPKNASVHVNMS 357

[Close]

BLAST of Carg23237 vs. Swiss-Prot
Match: sp|Q8BUH7|RNF26_MOUSE (E3 ubiquitin-protein ligase RNF26 OS=Mus musculus OX=10090 GN=Rnf26 PE=2 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 7.3e-05
Identity = 26/76 (34.21%), Postives = 39/76 (51.32%), Query Frame = 0


Query: 261 EDAESGYVDPDRVI--AESGPSCKACRKRVASVVLLPCRHFCICTVCDHVV-------RT 320
           ED  +   DP +++   E    C  C+ +  +V+LLPCRH C+C  C  ++       R 
Sbjct: 349 EDEPAAGQDPWKLLKEQEERKKCVICQDQSKTVLLLPCRHLCLCQACTEILMRHPVYHRN 408

Query: 321 CPLCRALRNSSVEVYL 328
           CPLCR     ++ VYL
Sbjct: 409 CPLCRRSILQTLNVYL 424

[Close]

BLAST of Carg23237 vs. TrEMBL
Match: tr|A0A0A0L434|A0A0A0L434_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016980 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 7.4e-87
Identity = 227/340 (66.76%), Postives = 239/340 (70.29%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLL NRNIQD+ HDYSLQ             XXXXXXXX           
Sbjct: 1   MAVQAQYPSNVLLLNRNIQDAEHDYSLQ---------PQPGXXXXXXXXXXXXXXXXXXX 60

Query: 61  YLSNLRKRGRD--VSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLN 120
           +LSNLRKRGRD  VSVS P INPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQ LN
Sbjct: 61  HLSNLRKRGRDNSVSVSPPTINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQPLN 120

Query: 121 PH----HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKR 180
            +                          DFSSQIK  R+EIDQFLQ QEEELRR      
Sbjct: 121 LYXXXXXXXXXXXXXXXXXXXXXXXXXXDFSSQIKQHREEIDQFLQTQEEELRRTXXXXX 180

Query: 181 HRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXX 240
                         AVRRLREKEVEVEKATR H        RLSMEA XXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXAVRRLREKEVEVEKATRXHXXXXXXXXRLSMEAXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXAIIKGAGIGGG------GDCTAEDAESGYVDPDRVIAESGPSCKACRKRV 300
           XXXXXXXXX AI++G GIGG       GDCTAEDAESGY+DP+RV+AESGPSCK+CRKRV
Sbjct: 241 XXXXXXXXXQAIMRGTGIGGSGDGGVVGDCTAEDAESGYIDPERVLAESGPSCKSCRKRV 300

Query: 301 ASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           ASVVLLPCRHFC+C+VCDHVVRTCPLCRA RNSSVEVYLS
Sbjct: 301 ASVVLLPCRHFCVCSVCDHVVRTCPLCRASRNSSVEVYLS 331

[Close]

BLAST of Carg23237 vs. TrEMBL
Match: tr|A0A1S3BL24|A0A1S3BL24_CUCME (probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucumis melo OX=3656 GN=LOC103490824 PE=4 SV=1)

HSP 1 Score: 300.1 bits (767), Expect = 6.3e-78
Identity = 219/340 (64.41%), Postives = 228/340 (67.06%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLL NRNIQD+ HDYSLQ         XXXXXXXXXXXX           
Sbjct: 1   MAVQAQYPSNVLLLNRNIQDAEHDYSLQ------PQPXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  YLSNLRKRGRD--VSVSAPIINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLSSGDQGLN 120
             SNLRKRGRD  VSVS P INPLCFQPQIIDLSQLHNHHHPSNVVSTGLRL SGDQ LN
Sbjct: 61  XXSNLRKRGRDNSVSVSPPTINPLCFQPQIIDLSQLHNHHHPSNVVSTGLRLFSGDQPLN 120

Query: 121 PH----HHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRALAEKR 180
            +                        SDDFSSQIK  R+EIDQFLQ Q            
Sbjct: 121 LYXXXXXXXXXXXXXXXXXXXXXXXXSDDFSSQIKQHREEIDQFLQTQXXXXXXXXXXXX 180

Query: 181 HRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXXXXXX 240
                             LREKEVEVEKATRRHA              XXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXLREKEVEVEKATRRHAXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXAIIKGAGIGGG------GDCTAEDAESGYVDPDRVIAESGPSCKACRKRV 300
           XXXXXXXXX AI++G GIGG       GDCTAEDAESGY+DPDRVIAESGPSCK+CRKRV
Sbjct: 241 XXXXXXXXXQAIMRGTGIGGSGDGGVVGDCTAEDAESGYIDPDRVIAESGPSCKSCRKRV 300

Query: 301 ASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
           ASVVLLPCRHFC+C+VCDHVVRTCPLCRA RNSSVEVYLS
Sbjct: 301 ASVVLLPCRHFCLCSVCDHVVRTCPLCRASRNSSVEVYLS 334

[Close]

BLAST of Carg23237 vs. TrEMBL
Match: tr|A0A2N9GEH3|A0A2N9GEH3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28868 PE=4 SV=1)

HSP 1 Score: 287.0 bits (733), Expect = 5.5e-74
Identity = 200/362 (55.25%), Postives = 225/362 (62.15%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLL NRN Q+ GHDYSLQ                     SH LFNNG G+
Sbjct: 1   MAVQAQYPSNVLLLNRNGQE-GHDYSLQ------------PQPGGFLDQSHMLFNNGAGS 60

Query: 61  YLSNLRKRGRDVSVSAPI-----INPLCF-----QPQIIDLSQLHNHHHPSNVVSTGLRL 120
             +N RKR R+V+ S  +     +NP+        PQ+IDLSQLHN++H  NVVSTGLRL
Sbjct: 61  --NNPRKRAREVAASIGVSSSAPMNPIFSLQSQQAPQLIDLSQLHNNNHQPNVVSTGLRL 120

Query: 121 SSGDQGLNPHHHTPPQNDDNLVSL-----SSSVFIS---DDFSSQIKGQRDEIDQFLQAQ 180
           S GD                         SSS F+S   +D++SQIK QRDEI+QFLQAQ
Sbjct: 121 SFGDXXXXXXXXXXXXXXXXXXXXXXXCHSSSPFLSVITEDYASQIKQQRDEIEQFLQAQ 180

Query: 181 EEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQ 240
            E+LRR LAEKR RHYR LLGA E +  RRLR+KEVEVEKATRR+AELEARAA+LS+EAQ
Sbjct: 181 GEQLRRTLAEKRQRHYRALLGAAEESVARRLRDKEVEVEKATRRNAELEARAAQLSVEAQ 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXAIIKG----------------AGIGGGGDCTAEDAESG 300
                XXXXXXXXX        AI                    G   G D   EDAES 
Sbjct: 241 VWQAKXXXXXXXXXSLQAQLQRAIXXXXXXXXXXXXSRRVEDPLGCPVGVDGQVEDAESA 300

Query: 301 YVDPDRVIAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVY 329
           +VDPDRV+  SGPSCK CRKRVASVVLLPCRH CICT CD VV+ CPLC  LRNSSVEVY
Sbjct: 301 FVDPDRVVV-SGPSCKGCRKRVASVVLLPCRHLCICTECDQVVQACPLCLTLRNSSVEVY 346

[Close]

BLAST of Carg23237 vs. TrEMBL
Match: tr|F6HTE1|F6HTE1_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00290 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 4.7e-73
Identity = 184/355 (51.83%), Postives = 209/355 (58.87%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSNVLL NR +QD   D SLQ                     SH LFNNG   
Sbjct: 1   MAVQAQYPSNVLLLNRGVQDGKIDCSLQ------------PQPGGFLDQSHMLFNNG--- 60

Query: 61  YLSNLRKRGRDV-------SVSAPIINPLCFQP---QIIDLSQLHNHHHPSNVVSTGLRL 120
            ++N RKRGR+V        V AP +N    QP   Q+IDLS LHNH    NVVSTGLRL
Sbjct: 61  VVANSRKRGREVFGNTNTGGVVAPTVNSFPLQPQPSQLIDLSVLHNHQ--PNVVSTGLRL 120

Query: 121 SSGDQGLNPHHHTPPQNDDNLVSLSSSVFISDDFSSQIKGQRDEIDQFLQAQEEELRRAL 180
           + G+Q L                      +S+DF++QIK QRDEIDQFL+AQ E+LRR L
Sbjct: 121 AFGEQHLQXXXXXXXXXXXXXXXXXXXXLLSEDFTAQIKHQRDEIDQFLRAQGEQLRRTL 180

Query: 181 AEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEAQXXXXXXXX 240
           AEKR RHYR LLGA E +  RRLREKE EVEKA R +AELEARAA+LSMEAQ        
Sbjct: 181 AEKRQRHYRALLGAAEESVARRLREKEAEVEKAARCNAELEARAAQLSMEAQVWQAKARA 240

Query: 241 XXXXXXXXXXXXXXAIIKGAGI-----------------GGGGDCTAEDAESGYVDPDRV 300
                         A++ G G                  GGG    AEDAES Y+DP+RV
Sbjct: 241 QEATAASLQAQLQQAMMSGGGCSQDRRGEEGLGCAVGAEGGGCSGQAEDAESAYIDPERV 300

Query: 301 IAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVYLS 329
              SGP CKACRKRVASVVLLPCRHFCICT CD VV+ CPLC +LR+SSVEV+LS
Sbjct: 301 -KSSGPMCKACRKRVASVVLLPCRHFCICTQCDGVVQACPLCLSLRDSSVEVFLS 337

[Close]

BLAST of Carg23237 vs. TrEMBL
Match: tr|A0A2I4G590|A0A2I4G590_9ROSI (E3 ubiquitin-protein ligase BOI-like OS=Juglans regia OX=51240 GN=LOC109004823 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69
Identity = 193/362 (53.31%), Postives = 223/362 (61.60%), Query Frame = 0


Query: 1   MAVQAQYPSNVLLHNRNIQDSGHDYSLQXXXXXXXXXXXXXXXXXXXXXSHALFNNGGGN 60
           MAVQAQYPSN+LL NRN Q+ GHDYSLQ                     SH L  N G  
Sbjct: 1   MAVQAQYPSNILLLNRNGQE-GHDYSLQ------------PQLGGFLDQSHMLLINNGVG 60

Query: 61  YLSNLRKRGRD------VSVSAPIINP---LCFQP-QIIDLSQLHNHH--HPSNVVSTGL 120
             +N RKR R+      VS SAP INP   L  QP Q+IDLSQLHN++  H  NVVSTGL
Sbjct: 61  TGNNPRKRAREVVQTTGVSSSAP-INPMFSLQSQPSQLIDLSQLHNNNNTHQPNVVSTGL 120

Query: 121 RLSSGD----QGLNPHHHTPPQNDDNLVSLSSSVFIS---DDFSSQIKGQRDEIDQFLQA 180
           RLS GD                     V  SSS F+S   +DF++QI+ QRDEI+QFL+A
Sbjct: 121 RLSFGDXXXXXXXXXXXXXXXXXXXXXVCHSSSPFLSLIAEDFATQIRYQRDEIEQFLEA 180

Query: 181 QEEELRRALAEKRHRHYRELLGAVEATAVRRLREKEVEVEKATRRHAELEARAARLSMEA 240
           Q E+LRR LAEKR RHYR LL A E +  RRLREKEVEVEKATRR+AELEARAA+LS+EA
Sbjct: 181 QGEQLRRTLAEKRQRHYRTLLSAAEGSVARRLREKEVEVEKATRRNAELEARAAQLSVEA 240

Query: 241 QXXXXXXXXXXXXXXXXXXXXXXAII---------------KGAGIGGGGDCTAEDAESG 300
           Q    XXXXXX            AI+               +G+  GG      EDAES 
Sbjct: 241 QVWQAXXXXXXATAASLQAQLQKAIMTTGGGAHDSRMMEDPQGSAAGGVEGHQVEDAESA 300

Query: 301 YVDPDRVIAESGPSCKACRKRVASVVLLPCRHFCICTVCDHVVRTCPLCRALRNSSVEVY 329
           Y+DP+RV+  SGP CKACRKRVASVVLLPCRH CIC+ CD V + CPLC +LR+SS+EVY
Sbjct: 301 YIDPERVVV-SGPRCKACRKRVASVVLLPCRHLCICSECDQVAQACPLCLSLRSSSIEVY 347

The following BLAST results are available for this feature:

BLAST of Carg23237 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022923525.1	9.9e-152	100.00	BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita moschata]	[more]
XP_022923526.1	3.9e-132	100.00	BOI-related E3 ubiquitin-protein ligase 1-like isoform X2 [Cucurbita moschata]	[more]
XP_022965101.1	4.3e-131	88.11	BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita maxima]	[more]
XP_023552759.1	1.4e-129	90.85	BOI-related E3 ubiquitin-protein ligase 1-like isoform X1 [Cucurbita pepo subsp....	[more]
XP_023552760.1	1.1e-113	90.37	BOI-related E3 ubiquitin-protein ligase 1-like isoform X2 [Cucurbita pepo subsp....	[more]

BLAST of Carg23237 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G32740.1	1.3e-44	46.46	SBP (S-ribonuclease binding protein) family protein	[more]
AT4G17680.1	8.6e-41	39.58	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G10650.1	3.9e-17	26.86	SBP (S-ribonuclease binding protein) family protein	[more]
AT1G45976.1	1.1e-16	29.07	S-ribonuclease binding protein 1	[more]
AT1G60610.1	1.9e-16	25.83	SBP (S-ribonuclease binding protein) family protein	[more]

BLAST of Carg23237 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O81851\|BOI_ARATH	2.1e-12	30.69	E3 ubiquitin-protein ligase BOI OS=Arabidopsis thaliana OX=3702 GN=BOI PE=1 SV=1	[more]
sp\|Q9FHE4\|BRG1_ARATH	4.7e-12	29.90	BOI-related E3 ubiquitin-protein ligase 1 OS=Arabidopsis thaliana OX=3702 GN=BRG...	[more]
sp\|Q9LDD1\|BRG3_ARATH	5.8e-10	26.07	Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana OX=37...	[more]
sp\|F4IDI6\|BRG2_ARATH	8.3e-09	27.10	Probable BOI-related E3 ubiquitin-protein ligase 2 OS=Arabidopsis thaliana OX=37...	[more]
sp\|Q8BUH7\|RNF26_MOUSE	7.3e-05	34.21	E3 ubiquitin-protein ligase RNF26 OS=Mus musculus OX=10090 GN=Rnf26 PE=2 SV=1	[more]

BLAST of Carg23237 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L434\|A0A0A0L434_CUCSA	7.4e-87	66.76	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G016980 PE=4 SV=1	[more]
tr\|A0A1S3BL24\|A0A1S3BL24_CUCME	6.3e-78	64.41	probable BOI-related E3 ubiquitin-protein ligase 3 OS=Cucumis melo OX=3656 GN=LO...	[more]
tr\|A0A2N9GEH3\|A0A2N9GEH3_FAGSY	5.5e-74	55.25	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS28868 PE=4 SV=1	[more]
tr\|F6HTE1\|F6HTE1_VITVI	4.7e-73	51.83	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g00290 PE=4 SV=...	[more]
tr\|A0A2I4G590\|A0A2I4G590_9ROSI	4.1e-69	53.31	E3 ubiquitin-protein ligase BOI-like OS=Juglans regia OX=51240 GN=LOC109004823 P...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR017066	E3ligase_BOI_like
IPR013083	Znf_RING/FYVE/PHD

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23237-RA	Carg23237-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 193..248
None	No IPR available	COILS	Coil	Coil	coord: 152..172
None	No IPR available	PFAM	PF13920	zf-C3HC4_3	coord: 280..317 e-value: 1.3E-7 score: 31.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 100..132
None	No IPR available	PANTHER	PTHR42647	FAMILY NOT NAMED	coord: 1..328
None	No IPR available	PANTHER	PTHR42647:SF13	SUBFAMILY NOT NAMED	coord: 1..328
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 274..319
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 259..328 e-value: 4.8E-11 score: 44.0
IPR017066	E3 ubiquitin-protein ligase BOI-like	PIRSF	PIRSF036836	SBP1_RNase_bind	coord: 1..328 e-value: 8.6E-83 score: 276.7
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 281..316 score: 9.981

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23237	Cla016129	Watermelon (97103) v1	carwmB0702
Carg23237	Cla008770	Watermelon (97103) v1	carwmB0703
Carg23237	Csa3G911260	Cucumber (Chinese Long) v2	carcuB0728
Carg23237	Csa3G016980	Cucumber (Chinese Long) v2	carcuB0727
Carg23237	MELO3C013883	Melon (DHL92) v3.5.1	carmeB0704
Carg23237	MELO3C003360	Melon (DHL92) v3.5.1	carmeB0702
Carg23237	ClCG10G002020	Watermelon (Charleston Gray)	carwcgB0683
Carg23237	ClCG09G012480	Watermelon (Charleston Gray)	carwcgB0682
Carg23237	CSPI03G02080	Wild cucumber (PI 183967)	carcpiB0742
Carg23237	CSPI03G47220	Wild cucumber (PI 183967)	carcpiB0743
Carg23237	Cucsa.321500	Cucumber (Gy14) v1	carcgyB0792
Carg23237	Cucsa.313600	Cucumber (Gy14) v1	carcgyB0790
Carg23237	CmaCh16G010910	Cucurbita maxima (Rimu)	carcmaB0989
Carg23237	CmaCh02G015830	Cucurbita maxima (Rimu)	carcmaB0990
Carg23237	CmaCh06G008330	Cucurbita maxima (Rimu)	carcmaB0991
Carg23237	CmoCh16G011410	Cucurbita moschata (Rifu)	carcmoB0961
Carg23237	CmoCh06G008560	Cucurbita moschata (Rifu)	carcmoB0963
Carg23237	CmoCh02G016250	Cucurbita moschata (Rifu)	carcmoB0962
Carg23237	Lsi05G000410	Bottle gourd (USVL1VR-Ls)	carlsiB643
Carg23237	Lsi07G012370	Bottle gourd (USVL1VR-Ls)	carlsiB644
Carg23237	Cp4.1LG08g07040	Cucurbita pepo (Zucchini)	carcpeB0992
Carg23237	Cp4.1LG05g01950	Cucurbita pepo (Zucchini)	carcpeB0990
Carg23237	Cp4.1LG14g09010	Cucurbita pepo (Zucchini)	carcpeB0989
Carg23237	CsGy3G001960	Cucumber (Gy14) v2	carcgybB0704
Carg23237	CsGy3G044600	Cucumber (Gy14) v2	carcgybB0705
Carg23237	MELO3C013883.2	Melon (DHL92) v3.6.1	carmedB0716
Carg23237	MELO3C003360.2	Melon (DHL92) v3.6.1	carmedB0715
Carg23237	CsaV3_3G049650	Cucumber (Chinese Long) v3	carcucB0746
Carg23237	CsaV3_3G002110	Cucumber (Chinese Long) v3	carcucB0745
Carg23237	Cla97C10G186630	Watermelon (97103) v2	carwmbB0736
Carg23237	Bhi11G000095	Wax gourd	carwgoB0829

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23237	Carg12066	Silver-seed gourd	carcarB520
Carg23237	Carg08813	Silver-seed gourd	carcarB582

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23237	Watermelon (97103) v2	carwmbB0738