Carg23168 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23168
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Site-determining protein
Location	Cucurbita_argyrosperma_scaffold_144 : 82577 .. 83548 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAATCCTTCACCTTCTTCCCAATCCATTCATCTTCAATCCCTTCCATTCCAAAGCCTTCCCAATCCGCAACCCTAAATCCTTCCCCAAATCCCCCTCTTCCACCCCCGTTAAATCCGTCCTTCAATGGAATCGGAAGCCGGAGCTCGCCGGTGACACTCCCCGCGTCGTCGTCATCACCTCTGGTAAAGGCGGCGTTGGCAAGACCACCACCACTGCCAATGTCGGCATTTCCCTGGCCCGTCTTGGCTTCTCTGTTGTGGCCATTGATGCGGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGGCTTGAGAATCGTGTCAATTACACGGTTGTTGAGGTTCTCAATGGGGATTGCCGGTTGGATCAGGCTTTGGTGAGGGATAAACGATGGTCGAATTTTGAATTGCTTTGTATTTCGAAGCCTAGGTCGAAATTACCGATTGGTTTTGGTGGGAAAGCATTGGTTTGGCTTGTGGATGCGCTAAAAGCTAGACAAGAAGGTTGTCCTGATTTCATTATTATCGACTGTCCGGCTGGAATTGACGCCGGATTCATTACCGCCATTACACCTGCTAATGAGGCGATTCTTGTAACGACGCCGGATATCACGAGCTTGAGAGACGCCGATAGGGTGACGGGATTGCTTGAATGTGATGGAATTCGAGACATTAAGATGATGGTGAATCGGGTTCGGACTGATATGATCAAGGGGGAGGATATGATGTCTGTGCTAGACGTACAAGAGATGTTGGGGTTGGCTTTATTGGGTGCAATCCCTGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTGTTGAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTCGAAGAGGAGCCGAAGAAACGAGGTTTTTTCTCGTTCTTCGGTGTCTAA

mRNA sequence

ATGCGAATCCTTCACCTTCTTCCCAATCCATTCATCTTCAATCCCTTCCATTCCAAAGCCTTCCCAATCCGCAACCCTAAATCCTTCCCCAAATCCCCCTCTTCCACCCCCGTTAAATCCGTCCTTCAATGGAATCGGAAGCCGGAGCTCGCCGGTGACACTCCCCGCGTCGTCGTCATCACCTCTGGTAAAGGCGGCGTTGGCAAGACCACCACCACTGCCAATGTCGGCATTTCCCTGGCCCGTCTTGGCTTCTCTGTTGTGGCCATTGATGCGGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGGCTTGAGAATCGTGTCAATTACACGGTTGTTGAGGTTCTCAATGGGGATTGCCGGTTGGATCAGGCTTTGGTGAGGGATAAACGATGGTCGAATTTTGAATTGCTTTGTATTTCGAAGCCTAGGTCGAAATTACCGATTGGTTTTGGTGGGAAAGCATTGGTTTGGCTTGTGGATGCGCTAAAAGCTAGACAAGAAGGTTGTCCTGATTTCATTATTATCGACTGTCCGGCTGGAATTGACGCCGGATTCATTACCGCCATTACACCTGCTAATGAGGCGATTCTTGTAACGACGCCGGATATCACGAGCTTGAGAGACGCCGATAGGGTGACGGGATTGCTTGAATGTGATGGAATTCGAGACATTAAGATGATGGTGAATCGGGTTCGGACTGATATGATCAAGGGGGAGGATATGATGTCTGTGCTAGACGTACAAGAGATGTTGGGGTTGGCTTTATTGGGTGCAATCCCTGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTGTTGAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTCGAAGAGGAGCCGAAGAAACGAGGTTTTTTCTCGTTCTTCGGTGTCTAA

Coding sequence (CDS)

ATGCGAATCCTTCACCTTCTTCCCAATCCATTCATCTTCAATCCCTTCCATTCCAAAGCCTTCCCAATCCGCAACCCTAAATCCTTCCCCAAATCCCCCTCTTCCACCCCCGTTAAATCCGTCCTTCAATGGAATCGGAAGCCGGAGCTCGCCGGTGACACTCCCCGCGTCGTCGTCATCACCTCTGGTAAAGGCGGCGTTGGCAAGACCACCACCACTGCCAATGTCGGCATTTCCCTGGCCCGTCTTGGCTTCTCTGTTGTGGCCATTGATGCGGACGTTGGCCTCCGGAATCTCGACCTTCTTTTAGGGCTTGAGAATCGTGTCAATTACACGGTTGTTGAGGTTCTCAATGGGGATTGCCGGTTGGATCAGGCTTTGGTGAGGGATAAACGATGGTCGAATTTTGAATTGCTTTGTATTTCGAAGCCTAGGTCGAAATTACCGATTGGTTTTGGTGGGAAAGCATTGGTTTGGCTTGTGGATGCGCTAAAAGCTAGACAAGAAGGTTGTCCTGATTTCATTATTATCGACTGTCCGGCTGGAATTGACGCCGGATTCATTACCGCCATTACACCTGCTAATGAGGCGATTCTTGTAACGACGCCGGATATCACGAGCTTGAGAGACGCCGATAGGGTGACGGGATTGCTTGAATGTGATGGAATTCGAGACATTAAGATGATGGTGAATCGGGTTCGGACTGATATGATCAAGGGGGAGGATATGATGTCTGTGCTAGACGTACAAGAGATGTTGGGGTTGGCTTTATTGGGTGCAATCCCTGAGGATTCAGAGGTAATTCGTAGCACAAACAGAGGGTACCCTCTGGTGTTGAACAAGCCACCCACATTGGCGGGTTTGGCCTTTGAGCAGGCAGCTTGGAGGCTTGTTGAACAGGACAGTATGACGGCTGTGATGGTCGAAGAGGAGCCGAAGAAACGAGGTTTTTTCTCGTTCTTCGGTGTCTAA

Protein sequence

MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKRGFFSFFGV

Homology

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BLAST of Carg23168 vs. NCBI nr
Match: XP_023550014.1 (putative septum site-determining protein minD homolog, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023550016.1 putative septum site-determining protein minD homolog, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 637.5 bits (1643), Expect = 2.5e-179
Identity = 322/323 (99.69%), Postives = 322/323 (99.69%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI 60
           MRILHLLPNPFIFNPFHSKAFPI NPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI
Sbjct: 1   MRILHLLPNPFIFNPFHSKAFPIPNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI 60

Query: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120
           TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD
Sbjct: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120

Query: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP 180
           CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP
Sbjct: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP 180

Query: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240
           AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG
Sbjct: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240

Query: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 300
           EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ
Sbjct: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 300

Query: 301 DSMTAVMVEEEPKKRGFFSFFGV 324
           DSMTAVMVEEEPKKRGFFSFFGV
Sbjct: 301 DSMTAVMVEEEPKKRGFFSFFGV 323

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BLAST of Carg23168 vs. NCBI nr
Match: XP_022922361.1 (putative septum site-determining protein minD homolog, chloroplastic [Cucurbita moschata] >XP_022922362.1 putative septum site-determining protein minD homolog, chloroplastic [Cucurbita moschata])

HSP 1 Score: 634.4 bits (1635), Expect = 2.1e-178
Identity = 321/323 (99.38%), Postives = 321/323 (99.38%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI 60
           MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKS SSTPVKSVLQWNRKPELAGDTPRVVVI
Sbjct: 1   MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKSLSSTPVKSVLQWNRKPELAGDTPRVVVI 60

Query: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120
           TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD
Sbjct: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120

Query: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP 180
           CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP
Sbjct: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP 180

Query: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240
           AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG
Sbjct: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240

Query: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 300
           EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVE 
Sbjct: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEH 300

Query: 301 DSMTAVMVEEEPKKRGFFSFFGV 324
           DSMTAVMVEEEPKKRGFFSFFGV
Sbjct: 301 DSMTAVMVEEEPKKRGFFSFFGV 323

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BLAST of Carg23168 vs. NCBI nr
Match: XP_022973017.1 (putative septum site-determining protein minD homolog, chloroplastic [Cucurbita maxima])

HSP 1 Score: 630.6 bits (1625), Expect = 3.0e-177
Identity = 319/323 (98.76%), Postives = 319/323 (98.76%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAFPIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI 60
           MRILHLLP PFIFNPFHSKAFP  NPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI
Sbjct: 1   MRILHLLPKPFIFNPFHSKAFPSPNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVI 60

Query: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120
           TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD
Sbjct: 61  TSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGD 120

Query: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCP 180
           CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKAR EGCPDFIIIDCP
Sbjct: 121 CRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARPEGCPDFIIIDCP 180

Query: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240
           AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG
Sbjct: 181 AGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKG 240

Query: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 300
           EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ
Sbjct: 241 EDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 300

Query: 301 DSMTAVMVEEEPKKRGFFSFFGV 324
           DSMTAVMVEEEPKKRGFFSFFGV
Sbjct: 301 DSMTAVMVEEEPKKRGFFSFFGV 323

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BLAST of Carg23168 vs. NCBI nr
Match: XP_011654648.1 (PREDICTED: putative septum site-determining protein minD homolog, chloroplastic [Cucumis sativus] >KGN49923.1 hypothetical protein Csa_5G140490 [Cucumis sativus])

HSP 1 Score: 611.3 bits (1575), Expect = 1.9e-171
Identity = 311/324 (95.99%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAF--PIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVV 60
           MR LHLLPNPF FN FHSK    PI NPK  PKSPS TP+KSVLQWNRKPELAGDTPRVV
Sbjct: 1   MRSLHLLPNPFFFNSFHSKTLTSPIPNPKFLPKSPSFTPIKSVLQWNRKPELAGDTPRVV 60

Query: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120
           VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN
Sbjct: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120

Query: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180
           GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID
Sbjct: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180

Query: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240
           CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI
Sbjct: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240

Query: 241 KGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300
           KGEDMMSVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV
Sbjct: 241 KGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300

Query: 301 EQDSMTAVMVEEEPKKRGFFSFFG 323
           EQDSMTAVMVEEEPKKRGFFSFFG
Sbjct: 301 EQDSMTAVMVEEEPKKRGFFSFFG 324

[Close]

BLAST of Carg23168 vs. NCBI nr
Match: XP_008437530.1 (PREDICTED: putative septum site-determining protein minD homolog, chloroplastic [Cucumis melo])

HSP 1 Score: 608.2 bits (1567), Expect = 1.6e-170
Identity = 310/324 (95.68%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAF--PIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVV 60
           MR LHLLPNPF  N FHSK    PI NPK  PKSPS TP+KSVLQWNRKPELAGDTPRVV
Sbjct: 1   MRSLHLLPNPFFCNSFHSKTLTSPIPNPKFLPKSPSFTPIKSVLQWNRKPELAGDTPRVV 60

Query: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120
           VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN
Sbjct: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120

Query: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180
           GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID
Sbjct: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180

Query: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240
           CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI
Sbjct: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240

Query: 241 KGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300
           KGEDMMSVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV
Sbjct: 241 KGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300

Query: 301 EQDSMTAVMVEEEPKKRGFFSFFG 323
           EQDSMTAVMVEEEPKKRGFFSFFG
Sbjct: 301 EQDSMTAVMVEEEPKKRGFFSFFG 324

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BLAST of Carg23168 vs. TAIR10
Match: AT5G24020.1 (septum site-determining protein (MIND))

HSP 1 Score: 531.9 bits (1369), Expect = 2.6e-151
Identity = 266/300 (88.67%), Postives = 283/300 (94.33%), Query Frame = 0


Query: 23  IRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGKGGVGKTTTTANVGISLAR 82
           I +P+        +P++SVLQ+NRKPELAG+TPR+VVITSGKGGVGKTTTTANVG+SLAR
Sbjct: 26  ISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVITSGKGGVGKTTTTANVGLSLAR 85

Query: 83  LGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCIS 142
            GFSVVAIDAD+GLRNLDLLLGLENRVNYT VEV+NGDCRLDQALVRDKRWSNFELLCIS
Sbjct: 86  YGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGDCRLDQALVRDKRWSNFELLCIS 145

Query: 143 KPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTT 202
           KPRSKLP+GFGGKAL WLVDALK R EG PDFIIIDCPAGIDAGFITAITPANEA+LVTT
Sbjct: 146 KPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCPAGIDAGFITAITPANEAVLVTT 205

Query: 203 PDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGAIP 262
           PDIT+LRDADRVTGLLECDGIRDIKM+VNRVRTDMIKGEDMMSVLDVQEMLGL+LLG IP
Sbjct: 206 PDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLSLLGVIP 265

Query: 263 EDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKRGFFSFFG 322
           EDSEVIRSTNRG+PLVLNKPPTLAGLAFEQAAWRLVEQDSM AVMVEEEPKKRGFFSFFG
Sbjct: 266 EDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKRGFFSFFG 325

[Close]

BLAST of Carg23168 vs. TAIR10
Match: AT4G19540.1 (IND1(iron-sulfur protein required for NADH dehydrogenase)-like)

HSP 1 Score: 59.7 bits (143), Expect = 3.9e-09
Identity = 61/258 (23.64%), Postives = 121/258 (46.90%), Query Frame = 0


Query: 57  VVVITSGKGGVGKTTTTANVGISLA-RLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 116
           ++ + SGKGGVGK++T  N+ ++LA +    +  +DADV   ++ +++ +  +       
Sbjct: 45  IIAVASGKGGVGKSSTAVNLAVALANKCELKIGLLDADVYGPSVPIMMNINQKPQ----- 104

Query: 117 VLNGDCRLDQALVRDKRWSNFELLCISK---PRSKLPIGFGGKALV-WLVDALKARQEGC 176
            +N D ++           N+ + C+S         P+ + G  ++  L    K    G 
Sbjct: 105 -VNQDMKMIPV-------ENYGVKCMSMGLLVEKDAPLVWRGPMVMSALAKMTKGVDWGD 164

Query: 177 PDFIIIDCPAGI-DAGF-ITAITPANEAILVTTPDITSLRDADRVTGLLECDGIR-DIKM 236
            D +++D P G  DA   I+     + A++V+TP   +L DA+R  G+   D +R  I  
Sbjct: 165 LDILVVDMPPGTGDAQISISQNLKLSGAVIVSTPQDVALADANR--GISMFDKVRVPILG 224

Query: 237 MVNRVRTDMIKGEDMMSVLDVQE-------MLGLALLGAIPEDSEVIRSTNRGYPLVLNK 296
           +V  +   +    +  S +  +E         GL L+G IP +  +   ++ G P+V++ 
Sbjct: 225 LVENMSCFVCPHCNEPSFIFGKEGARRTAAKKGLKLIGEIPLEMSIREGSDEGVPVVVSS 284

Query: 297 PPTLAGLAFEQAAWRLVE 300
           P ++   A++  A  +V+
Sbjct: 285 PGSIVSKAYQDLAQNVVK 287

[Close]

BLAST of Carg23168 vs. TAIR10
Match: AT5G50960.1 (nucleotide binding protein 35)

HSP 1 Score: 49.7 bits (117), Expect = 4.0e-06
Identity = 48/182 (26.37%), Postives = 83/182 (45.60%), Query Frame = 0


Query: 58  VVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVL 117
           +++ SGKGGVGK+T +A +  +LA +   V  +D D+   ++  +LGLE +      E+ 
Sbjct: 62  ILVLSGKGGVGKSTFSAQLSFALAGMDHQVGLMDIDICGPSIPKMLGLEGQ------EIH 121

Query: 118 NGDCRLDQALVRDKRWSNFELLCIS--KPRSKLPIGFGGKALVWLV-DALKARQEGCPDF 177
             +       V D    N  ++ I    P S   + + G     L+   LK    G  D+
Sbjct: 122 QSNLGWSPVYVED----NLGVMSIGFMLPNSDEAVIWRGPRKNGLIKQFLKDVYWGEIDY 181

Query: 178 IIIDCPAGIDAGFITAI-----TPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMM 232
           +++D P G     I+ +     T  + AI+VTTP   SL D  +     +  G+  + ++
Sbjct: 182 LVVDAPPGTSDEHISIVQYLLPTGIDGAIIVTTPQEVSLIDVRKEVSFCKKVGVPVLGVV 233

[Close]

BLAST of Carg23168 vs. TAIR10
Match: AT3G24430.1 (ATP binding)

HSP 1 Score: 49.3 bits (116), Expect = 5.2e-06
Identity = 60/271 (22.14%), Postives = 108/271 (39.85%), Query Frame = 0


Query: 47  KPELAGDTP-------RVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNL 106
           KP  AG  P        ++ ++S KGGVGK+T   N+  +LA +G  V   DADV   +L
Sbjct: 161 KPIFAGQLPFGLSRISNIIAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 220

Query: 107 DLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVW 166
             ++  E+R+          +   ++  +    +   +L+          I  G      
Sbjct: 221 PTMVNPESRIL---------EMNPEKKTIIPTEYMGVKLVSFGFAGQGRAIMRGPMVSGV 280

Query: 167 LVDALKARQEGCPDFIIIDCPAGIDAGFIT--AITPANEAILVTTPDITSLRDADRVTGL 226
           +   L   + G  D+++ID P G     +T   + P   A++VTTP   +  D  +   +
Sbjct: 281 INQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVAPLTAAVIVTTPQKLAFIDVAKGVRM 340

Query: 227 LECDGIRDIKMMVNRVRTD--------MIKGEDMMSVLDVQEMLGLALLGAIPEDSEVIR 286
                +  + ++ N    D          KG    S  +V +  G+  L  +P    +  
Sbjct: 341 FSKLKVPCVAVVENMCHFDADGKRYYPFGKG----SGSEVVKQFGIPHLFDLPIRPTLSA 400

Query: 287 STNRGYPLVLNKPPTLAGLAFEQAAWRLVEQ 301
           S + G P V++ P +     F+     +V+Q
Sbjct: 401 SGDSGTPEVVSDPLSDVARTFQDLGVCVVQQ 418

[Close]

BLAST of Carg23168 vs. Swiss-Prot
Match: sp|Q9MBA2|MIND1_ARATH (Putative septum site-determining protein minD homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MIND1 PE=1 SV=1)

HSP 1 Score: 531.9 bits (1369), Expect = 4.8e-150
Identity = 266/300 (88.67%), Postives = 283/300 (94.33%), Query Frame = 0


Query: 23  IRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGKGGVGKTTTTANVGISLAR 82
           I +P+        +P++SVLQ+NRKPELAG+TPR+VVITSGKGGVGKTTTTANVG+SLAR
Sbjct: 26  ISSPRFVNNPSRRSPIRSVLQFNRKPELAGETPRIVVITSGKGGVGKTTTTANVGLSLAR 85

Query: 83  LGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCIS 142
            GFSVVAIDAD+GLRNLDLLLGLENRVNYT VEV+NGDCRLDQALVRDKRWSNFELLCIS
Sbjct: 86  YGFSVVAIDADLGLRNLDLLLGLENRVNYTCVEVINGDCRLDQALVRDKRWSNFELLCIS 145

Query: 143 KPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTT 202
           KPRSKLP+GFGGKAL WLVDALK R EG PDFIIIDCPAGIDAGFITAITPANEA+LVTT
Sbjct: 146 KPRSKLPMGFGGKALEWLVDALKTRPEGSPDFIIIDCPAGIDAGFITAITPANEAVLVTT 205

Query: 203 PDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGAIP 262
           PDIT+LRDADRVTGLLECDGIRDIKM+VNRVRTDMIKGEDMMSVLDVQEMLGL+LLG IP
Sbjct: 206 PDITALRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGLSLLGVIP 265

Query: 263 EDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKRGFFSFFG 322
           EDSEVIRSTNRG+PLVLNKPPTLAGLAFEQAAWRLVEQDSM AVMVEEEPKKRGFFSFFG
Sbjct: 266 EDSEVIRSTNRGFPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKRGFFSFFG 325

[Close]

BLAST of Carg23168 vs. Swiss-Prot
Match: sp|Q20EV4|MIND_OLTVI (Putative septum site-determining protein MinD OS=Oltmannsiellopsis viridis OX=51324 GN=minD PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 4.6e-84
Identity = 167/275 (60.73%), Postives = 211/275 (76.73%), Query Frame = 0


Query: 26  PKSFPKSPSSTPVKSVLQWNRKPE--LAGDTPRVVVITSGKGGVGKTTTTANVGISLARL 85
           P+ F  S SS       + N +P+  L   TPR +V+TSGKGGVGKTT TAN+G+S+ARL
Sbjct: 28  PRVFHPSTSS-------EINERPDLNLLEGTPRTIVVTSGKGGVGKTTATANLGMSIARL 87

Query: 86  GFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISK 145
           G+ VV +DAD+GLRNLDLLLGLENRV YT +++L+G CRLDQAL+RDKRW N  LL ISK
Sbjct: 88  GYRVVLVDADIGLRNLDLLLGLENRVLYTAMDILDGQCRLDQALIRDKRWKNLSLLAISK 147

Query: 146 PRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTTP 205
            R +  +    K +  L+++L   Q+   D+I+IDCPAGID GFI A++PA EAI+VTTP
Sbjct: 148 NRQRYNV--TRKRMNMLIESL---QKQGYDYILIDCPAGIDVGFINAVSPAKEAIIVTTP 207

Query: 206 DITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGAIPE 265
           +ITS+RDADRV GLLE +GI ++K++VNRVR++MI+  DMMSV DVQEMLG+ LLGAIPE
Sbjct: 208 EITSIRDADRVAGLLESNGIYNVKLLVNRVRSEMIQQNDMMSVRDVQEMLGIPLLGAIPE 267

Query: 266 DSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 299
           D+ VI STNRG PLVL K  TL+G+AFE AA RL+
Sbjct: 268 DNHVIISTNRGEPLVLKKKLTLSGIAFENAARRLI 290

[Close]

BLAST of Carg23168 vs. Swiss-Prot
Match: sp|Q9MUM5|MIND_MESVI (Putative septum site-determining protein MinD OS=Mesostigma viride OX=41882 GN=minD PE=3 SV=1)

HSP 1 Score: 310.5 bits (794), Expect = 2.3e-83
Identity = 164/257 (63.81%), Postives = 199/257 (77.43%), Query Frame = 0


Query: 43  QWNRKPELAGDT-PRVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDL 102
           Q N+  E    T  R +VITSGKGGVGKTTTTAN+G+S+ARLG+ V  IDADVGLRNLDL
Sbjct: 4   QINKDGEKKNSTDTRTIVITSGKGGVGKTTTTANLGMSIARLGYKVALIDADVGLRNLDL 63

Query: 103 LLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLV 162
           LLGLENRV YT +EV  G+C LDQAL+RDKRWSN  LL ISK R +  +    + +  LV
Sbjct: 64  LLGLENRVIYTAMEVFEGECCLDQALIRDKRWSNLALLAISKTRQRYHL--TRRNMEMLV 123

Query: 163 DALKARQEGCPDFIIIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECD 222
           D+++ R     +FI+IDCPAGID GF+ A+ PA EA++VTTP+ITS+RDADRV GLLE  
Sbjct: 124 DSIRLRNY---NFILIDCPAGIDVGFVNAVAPAEEAVVVTTPEITSIRDADRVAGLLEAS 183

Query: 223 GIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNK 282
           GI ++K++VNRVR DMI+  DM+SV DVQEMLG+ LLGAIPED+ VI STNRG PLVLNK
Sbjct: 184 GIYEVKLLVNRVRPDMIQKNDMLSVRDVQEMLGIPLLGAIPEDTNVIVSTNRGQPLVLNK 243

Query: 283 PPTLAGLAFEQAAWRLV 299
             TL+G++FE AA RLV
Sbjct: 244 KLTLSGISFENAARRLV 255

[Close]

BLAST of Carg23168 vs. Swiss-Prot
Match: sp|P56346|MIND_CHLVU (Putative septum site-determining protein MinD OS=Chlorella vulgaris OX=3077 GN=minD PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 9.5e-82
Identity = 159/243 (65.43%), Postives = 194/243 (79.84%), Query Frame = 0


Query: 56  RVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 115
           RV+VITSGKGGVGKTTTTAN+G+S+ARLG+ V  IDAD+GLRNLDLLLGLENRV YT ++
Sbjct: 17  RVIVITSGKGGVGKTTTTANLGMSIARLGYRVALIDADIGLRNLDLLLGLENRVLYTAMD 76

Query: 116 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFI 175
           ++ G CRLDQAL+RDKRW N  LL ISK R K  +    K +  L+D++K   E    F+
Sbjct: 77  IVEGQCRLDQALIRDKRWKNLALLAISKNRQKYNV--TRKNMQNLIDSVK---ELGFQFV 136

Query: 176 IIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRT 235
           +IDCPAGID GFI AI  A EA++VTTP+IT++RDADRV GLLE +GI ++K++VNRVR 
Sbjct: 137 LIDCPAGIDVGFINAIASAQEAVIVTTPEITAIRDADRVAGLLEANGIYNVKLLVNRVRP 196

Query: 236 DMIKGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 295
           DMI+  DMMSV DVQEMLG+ LLGAIPED+ VI STN+G PLVLNK  TL+G+AFE AA 
Sbjct: 197 DMIQKNDMMSVRDVQEMLGIPLLGAIPEDTSVIISTNKGEPLVLNKKLTLSGIAFENAAR 254

Query: 296 RLV 299
           RL+
Sbjct: 257 RLI 254

[Close]

BLAST of Carg23168 vs. Swiss-Prot
Match: sp|Q3ZIZ0|MIND_TUPAK (Putative septum site-determining protein MinD OS=Tupiella akineta OX=160070 GN=minD PE=3 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 1.2e-79
Identity = 156/243 (64.20%), Postives = 192/243 (79.01%), Query Frame = 0


Query: 56  RVVVITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVE 115
           R++V+TSGKGGVGKTT TAN+G+S+ARLG+ VV IDAD+GLRNLDLLLGLENR+ YTV++
Sbjct: 42  RIIVVTSGKGGVGKTTATANIGMSIARLGYKVVLIDADIGLRNLDLLLGLENRILYTVMD 101

Query: 116 VLNGDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFI 175
           V  G CRLDQAL+RDKRW N  LL ISK R +  +    K +  LV AL         +I
Sbjct: 102 VFEGQCRLDQALIRDKRWKNLSLLSISKNRQRYNV--TRKNMQNLVKALANLNF---RYI 161

Query: 176 IIDCPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRT 235
           +IDCPAGID GFI AI+PA EA++VTT +I ++RDADRV GLLE +GI DIK+++NRVR+
Sbjct: 162 LIDCPAGIDVGFINAISPAQEALIVTTSEIPAIRDADRVAGLLEANGIFDIKLLINRVRS 221

Query: 236 DMIKGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAW 295
           D+I+  DMMSV DVQE+LG+ LLGAIPED++VI STNRG PLVL K  TL+G+AFE AA 
Sbjct: 222 DLIQKNDMMSVRDVQEVLGVPLLGAIPEDNQVIVSTNRGEPLVLKKKLTLSGIAFENAAR 279

Query: 296 RLV 299
           RLV
Sbjct: 282 RLV 279

[Close]

BLAST of Carg23168 vs. TrEMBL
Match: tr|A0A0A0KK13|A0A0A0KK13_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140490 PE=4 SV=1)

HSP 1 Score: 611.3 bits (1575), Expect = 1.3e-171
Identity = 311/324 (95.99%), Postives = 312/324 (96.30%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAF--PIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVV 60
           MR LHLLPNPF FN FHSK    PI NPK  PKSPS TP+KSVLQWNRKPELAGDTPRVV
Sbjct: 1   MRSLHLLPNPFFFNSFHSKTLTSPIPNPKFLPKSPSFTPIKSVLQWNRKPELAGDTPRVV 60

Query: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120
           VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN
Sbjct: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120

Query: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180
           GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID
Sbjct: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180

Query: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240
           CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI
Sbjct: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240

Query: 241 KGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300
           KGEDMMSVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV
Sbjct: 241 KGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300

Query: 301 EQDSMTAVMVEEEPKKRGFFSFFG 323
           EQDSMTAVMVEEEPKKRGFFSFFG
Sbjct: 301 EQDSMTAVMVEEEPKKRGFFSFFG 324

[Close]

BLAST of Carg23168 vs. TrEMBL
Match: tr|A0A1S3AU92|A0A1S3AU92_CUCME (putative septum site-determining protein minD homolog, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103482915 PE=4 SV=1)

HSP 1 Score: 608.2 bits (1567), Expect = 1.1e-170
Identity = 310/324 (95.68%), Postives = 311/324 (95.99%), Query Frame = 0


Query: 1   MRILHLLPNPFIFNPFHSKAF--PIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVV 60
           MR LHLLPNPF  N FHSK    PI NPK  PKSPS TP+KSVLQWNRKPELAGDTPRVV
Sbjct: 1   MRSLHLLPNPFFCNSFHSKTLTSPIPNPKFLPKSPSFTPIKSVLQWNRKPELAGDTPRVV 60

Query: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120
           VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN
Sbjct: 61  VITSGKGGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLN 120

Query: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180
           GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID
Sbjct: 121 GDCRLDQALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIID 180

Query: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240
           CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI
Sbjct: 181 CPAGIDAGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMI 240

Query: 241 KGEDMMSVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300
           KGEDMMSVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV
Sbjct: 241 KGEDMMSVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLV 300

Query: 301 EQDSMTAVMVEEEPKKRGFFSFFG 323
           EQDSMTAVMVEEEPKKRGFFSFFG
Sbjct: 301 EQDSMTAVMVEEEPKKRGFFSFFG 324

[Close]

BLAST of Carg23168 vs. TrEMBL
Match: tr|A0A1U8JM36|A0A1U8JM36_GOSHI (putative septum site-determining protein minD homolog, chloroplastic OS=Gossypium hirsutum OX=3635 GN=LOC107908590 PE=4 SV=1)

HSP 1 Score: 556.6 bits (1433), Expect = 3.7e-155
Identity = 284/318 (89.31%), Postives = 298/318 (93.71%), Query Frame = 0


Query: 8   PNPFIFN-PFHSKAFP--IRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGK 67
           P P + + P +   +P  ++ PK +PKS    P+ SVLQWNRKPELAG+TPRVVVITSGK
Sbjct: 11  PKPTLLDYPLNPLLYPKCLKPPKPYPKS-KPAPISSVLQWNRKPELAGETPRVVVITSGK 70

Query: 68  GGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD 127
           GGVGKTTTTANVG+SLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD
Sbjct: 71  GGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD 130

Query: 128 QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGID 187
           QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKAR+EG PDFI+IDCPAGID
Sbjct: 131 QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKAREEGSPDFILIDCPAGID 190

Query: 188 AGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMM 247
           AGFITAITPANEA+LVTTPDITSLRDADRVTGLLECDGIRDIKM+VNRVRTDMIKGEDMM
Sbjct: 191 AGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMM 250

Query: 248 SVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMT 307
           SVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM 
Sbjct: 251 SVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMK 310

Query: 308 AVMVEEEPKKRGFFSFFG 323
           AVMVEEEPKKRGFFSFFG
Sbjct: 311 AVMVEEEPKKRGFFSFFG 327

[Close]

BLAST of Carg23168 vs. TrEMBL
Match: tr|W9RS56|W9RS56_9ROSA (Site-determining protein OS=Morus notabilis OX=981085 GN=L484_014238 PE=3 SV=1)

HSP 1 Score: 555.1 bits (1429), Expect = 1.1e-154
Identity = 280/307 (91.21%), Postives = 292/307 (95.11%), Query Frame = 0


Query: 16  FHSKAFPIRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGKGGVGKTTTTAN 75
           FH+   P   P  FP +P    V+SVLQWNRKPELAG+TPRVVVITSGKGGVGKTTTTAN
Sbjct: 14  FHTPKTP--KPPRFP-TPKPLAVRSVLQWNRKPELAGETPRVVVITSGKGGVGKTTTTAN 73

Query: 76  VGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSN 135
           +G+SLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSN
Sbjct: 74  IGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLDQALVRDKRWSN 133

Query: 136 FELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGIDAGFITAITPAN 195
           FELLCISKPRSKLPIGFGGKAL+WLVDALK+RQEGCPDF+IIDCPAGIDAGFITAITPAN
Sbjct: 134 FELLCISKPRSKLPIGFGGKALIWLVDALKSRQEGCPDFVIIDCPAGIDAGFITAITPAN 193

Query: 196 EAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMMSVLDVQEMLGL 255
           EA+LVTTPDITSLRDADRVTGLLECDGIRDIKM+VNRVRTDMIKGEDMMSVLDVQEMLGL
Sbjct: 194 EAVLVTTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMMSVLDVQEMLGL 253

Query: 256 ALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMTAVMVEEEPKKR 315
           ALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM AVMVEEEPKK+
Sbjct: 254 ALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMKAVMVEEEPKKK 313

Query: 316 GFFSFFG 323
           GFFSFFG
Sbjct: 314 GFFSFFG 317

[Close]

BLAST of Carg23168 vs. TrEMBL
Match: tr|A0A2P5X0J0|A0A2P5X0J0_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23814 PE=4 SV=1)

HSP 1 Score: 554.7 bits (1428), Expect = 1.4e-154
Identity = 283/318 (88.99%), Postives = 297/318 (93.40%), Query Frame = 0


Query: 8   PNPFIFN-PFHSKAFP--IRNPKSFPKSPSSTPVKSVLQWNRKPELAGDTPRVVVITSGK 67
           P P + + P +   +P  ++ PK +PKS    P+ SVL WNRKPELAG+TPRVVVITSGK
Sbjct: 11  PKPTLLDYPLNPLLYPKCLKPPKPYPKS-KPAPISSVLSWNRKPELAGETPRVVVITSGK 70

Query: 68  GGVGKTTTTANVGISLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD 127
           GGVGKTTTTANVG+SLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD
Sbjct: 71  GGVGKTTTTANVGLSLARLGFSVVAIDADVGLRNLDLLLGLENRVNYTVVEVLNGDCRLD 130

Query: 128 QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKARQEGCPDFIIIDCPAGID 187
           QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKAR+EG PDFI+IDCPAGID
Sbjct: 131 QALVRDKRWSNFELLCISKPRSKLPIGFGGKALVWLVDALKAREEGSPDFILIDCPAGID 190

Query: 188 AGFITAITPANEAILVTTPDITSLRDADRVTGLLECDGIRDIKMMVNRVRTDMIKGEDMM 247
           AGFITAITPANEA+LVTTPDITSLRDADRVTGLLECDGIRDIKM+VNRVRTDMIKGEDMM
Sbjct: 191 AGFITAITPANEAVLVTTPDITSLRDADRVTGLLECDGIRDIKMIVNRVRTDMIKGEDMM 250

Query: 248 SVLDVQEMLGLALLGAIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMT 307
           SVLDVQEMLGLALLG IPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSM 
Sbjct: 251 SVLDVQEMLGLALLGVIPEDSEVIRSTNRGYPLVLNKPPTLAGLAFEQAAWRLVEQDSMK 310

Query: 308 AVMVEEEPKKRGFFSFFG 323
           AVMVEEEPKKRGFFSFFG
Sbjct: 311 AVMVEEEPKKRGFFSFFG 327

The following BLAST results are available for this feature:

BLAST of Carg23168 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023550014.1	2.5e-179	99.69	putative septum site-determining protein minD homolog, chloroplastic [Cucurbita ...	[more]
XP_022922361.1	2.1e-178	99.38	putative septum site-determining protein minD homolog, chloroplastic [Cucurbita ...	[more]
XP_022973017.1	3.0e-177	98.76	putative septum site-determining protein minD homolog, chloroplastic [Cucurbita ...	[more]
XP_011654648.1	1.9e-171	95.99	PREDICTED: putative septum site-determining protein minD homolog, chloroplastic ...	[more]
XP_008437530.1	1.6e-170	95.68	PREDICTED: putative septum site-determining protein minD homolog, chloroplastic ...	[more]

BLAST of Carg23168 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G24020.1	2.6e-151	88.67	septum site-determining protein (MIND)	[more]
AT4G19540.1	3.9e-09	23.64	IND1(iron-sulfur protein required for NADH dehydrogenase)-like	[more]
AT5G50960.1	4.0e-06	26.37	nucleotide binding protein 35	[more]
AT3G24430.1	5.2e-06	22.14	ATP binding	[more]

BLAST of Carg23168 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9MBA2\|MIND1_ARATH	4.8e-150	88.67	Putative septum site-determining protein minD homolog, chloroplastic OS=Arabidop...	[more]
sp\|Q20EV4\|MIND_OLTVI	4.6e-84	60.73	Putative septum site-determining protein MinD OS=Oltmannsiellopsis viridis OX=51...	[more]
sp\|Q9MUM5\|MIND_MESVI	2.3e-83	63.81	Putative septum site-determining protein MinD OS=Mesostigma viride OX=41882 GN=m...	[more]
sp\|P56346\|MIND_CHLVU	9.5e-82	65.43	Putative septum site-determining protein MinD OS=Chlorella vulgaris OX=3077 GN=m...	[more]
sp\|Q3ZIZ0\|MIND_TUPAK	1.2e-79	64.20	Putative septum site-determining protein MinD OS=Tupiella akineta OX=160070 GN=m...	[more]

BLAST of Carg23168 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KK13\|A0A0A0KK13_CUCSA	1.3e-171	95.99	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G140490 PE=4 SV=1	[more]
tr\|A0A1S3AU92\|A0A1S3AU92_CUCME	1.1e-170	95.68	putative septum site-determining protein minD homolog, chloroplastic OS=Cucumis ...	[more]
tr\|A0A1U8JM36\|A0A1U8JM36_GOSHI	3.7e-155	89.31	putative septum site-determining protein minD homolog, chloroplastic OS=Gossypiu...	[more]
tr\|W9RS56\|W9RS56_9ROSA	1.1e-154	91.21	Site-determining protein OS=Morus notabilis OX=981085 GN=L484_014238 PE=3 SV=1	[more]
tr\|A0A2P5X0J0\|A0A2P5X0J0_GOSBA	1.4e-154	88.99	Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA23814 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016887	ATPase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR002586	CobQ/CobB/MinD/ParA_Nub-bd_dom
IPR010223	MinD_bac-type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016887	ATPase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23168-RA	Carg23168-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010223	ATP binding protein MinD, bacterial-type	TIGRFAM	TIGR01968	TIGR01968	coord: 56..309 e-value: 6.3E-96 score: 318.7
IPR002586	CobQ/CobB/MinD/ParA nucleotide binding domain	PFAM	PF01656	CbiA	coord: 58..276 e-value: 4.5E-22 score: 78.4
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 55..311 e-value: 9.2E-57 score: 194.4
None	No IPR available	PANTHER	PTHR43384:SF6	SEPTUM SITE-DETERMINING PROTEIN MIND HOMOLOG, CHLOROPLASTIC-RELATED	coord: 53..322
None	No IPR available	PANTHER	PTHR43384	FAMILY NOT NAMED	coord: 53..322
None	No IPR available	CDD	cd02036	MinD	coord: 57..290 e-value: 6.033E-79 score: 240.17
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 55..301

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23168	Cla004943	Watermelon (97103) v1	carwmB0540
Carg23168	Csa5G140490	Cucumber (Chinese Long) v2	carcuB0572
Carg23168	MELO3C005838	Melon (DHL92) v3.5.1	carmeB0549
Carg23168	ClCG01G000930	Watermelon (Charleston Gray)	carwcgB0527
Carg23168	CSPI05G03730	Wild cucumber (PI 183967)	carcpiB0578
Carg23168	Cucsa.192990	Cucumber (Gy14) v1	carcgyB0620
Carg23168	CmaCh02G010790	Cucurbita maxima (Rimu)	carcmaB0759
Carg23168	CmaCh15G010770	Cucurbita maxima (Rimu)	carcmaB0757
Carg23168	CmoCh02G010960	Cucurbita moschata (Rifu)	carcmoB0737
Carg23168	CmoCh15G011360	Cucurbita moschata (Rifu)	carcmoB0735
Carg23168	Lsi09G000800	Bottle gourd (USVL1VR-Ls)	carlsiB492
Carg23168	Cp4.1LG13g02700	Cucurbita pepo (Zucchini)	carcpeB0766
Carg23168	Cp4.1LG05g06350	Cucurbita pepo (Zucchini)	carcpeB0767
Carg23168	CsGy5G000930	Cucumber (Gy14) v2	carcgybB0548
Carg23168	MELO3C005838.2	Melon (DHL92) v3.6.1	carmedB0555
Carg23168	CsaV3_5G001080	Cucumber (Chinese Long) v3	carcucB0579
Carg23168	Cla97C01G001010	Watermelon (97103) v2	carwmbB0568

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23168	Carg08399	Silver-seed gourd	carcarB505

The following block(s) are covering this gene:

None