Carg23161 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23161
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	root phototropism protein 3
Location	Cucurbita_argyrosperma_scaffold_194 : 226908 .. 229370 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCAAATTGGATGCGCATATTTTGCATTAATAACCTTTGTCTTCTTTTTCTCCTCTTATCACCTGCTCTGCTCTACTCTGTTTTCACCATTCTTCTCCCCAATTCCCACAAAATGAAGCACCAATCTCCGCCCCAGGATTCCGGCAAACTTTCCCCCGACCAATGCTACTGGTTTGACGATTCCGCCATTCTCGACATCGATTACTTCGTCAAAACCCTCGCCGCAATCAAGGCCAAAGGCGTTCGAACCGATTTAATCGGCTCTGTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAAGCCCTAGATCAACAAAAGGGGATTGATTTGACGAATTTCAACGAATCGCCGCAGAATGTGACGAATTCGTGGATGAAAAAGAAGTTCTTCGTCGAGACATTGGTCGGAGTTTTGCCGCCGGAGAGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTTCGGACGGCGAATATGGTGGGAGTGGAGCCTCCGTATAAGGCGGAGTTGGAGAAGAGGATTACGTGGCAGTTGGATCAAGCGTCGTTGAAGGAGGTGATGATTCCGTCGTTTAGTCACACGTGTGGGACGGTTTTGGATGTGGAGCTTGTGATTCGACTTGTGAAGAGGTTTGTTAGCTTGGACGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAATTGGTGGATTGTTACCTTGCTGAAGCGGCGATGGATTCTAATTTGGGATTGCTGGAGTTTGTTGAGCTCGCCGGAGTACTTCCCAGCCACGCCCGAGCCTCCGACGACGGACTGTACCGAGCCATTGATACGTATCTGAAAGTAAGGCTTCTTCTTCCTGTTTTAGTTTTGATTATGCCATTAATTGAACTAAATAATAATAATTTTTAAAAATAAAAAATTATAAATAAATAAAATCAAATGAAGTATAAATTTAAAGATAAAAAACAAAAGGATGAAAAATTATTTGGTTTTAAAATAGAAAGGAAAAAGGAAAAGATTCTCCCATGAAAAGCAGTTTGTCTCATTAGTTATTACTGTATATTGTGGGCAGAAGAGAGAGATAGGCAAAAAGTTAATTTGTTGTTTTCTTTTTGTTTCATCTTTCATTTAACTCGACTCAATTTCTACCAAGATCCGTCTAGAAGGGCATAAAGAATTTCCGTTTAAATGAAGAATAAGAGAGAAGAAAATTTTCGTTAGTTAAACATAGCCGTAGACGAGATTCTAAGGCTTTGTAGTCTAAGTGAGTTACTCTGTGGCACATACGTGTCACAACATGGGCGAGCGTGCTGATACGAGTCTCTCGAACGACTTTATTTGAAATGGGTTTTTCAAGGAGAGTACAAGGGCGACATGGGTGTGTTGGTATTGCGCTCTAACTTGTGTCGGAGGTTGATATATACACCCGCTATTTGGTACGGTATTCGTAAATGACATGACATGGGCATGGGAGGGCAATGCCTCGATGAAACCTAAATGGATGGATGTTCGAGATGTCTTGATGAGATGAGCGACATGTGTGGTCGAACAAGCTTGAATTCTGCACAAGCGATGTTCGGTAGGCAAAGACAAACCTCGCCTAAGTTCCGATAAAGCCACAAAGCTGGGGCGAAAAAGATGTATGAGGCTTGATTCCTCTCAAAGCTTATCGTGAGTGTGTCAAGATCACGACGCGGCACGGTTGAAAAAGTAGTAGGACCGTTACAGTTGACCAGTCAAAACTAATTTATGTCAGGCCTATAATAATTTTTTTACTTAGTAAATTATTTTTAAGGTTAAATGATTATTATGAATTATGAATTATTTATTTATAGGCACATCCGAATATATCGAAGCAAGAAAGAAAGAGTTTATGCAGACTAATGGACAGCCGAAAGCTGTCCACAGAAGCATCACTCCACGCCGCCCAAAACGACCGCCTCCCCGTCCGCGCCGTAATCCAAGTCCTGTTCTCCGAGCAAACCAAGCTCAACTACCGCCACCTCGACTGGAGCGGCTCAATCGGGGGCAGGAGTCCCTCCGCAGCCCTCGACCACCTGCCCGCCAGGTGCCAATCCAAGAGAGAAATAACTGCCCAACAAATGGAGATTAAGAAGCTGAAAGAGACGGTGGTGAGGCTGCAGAACCAGTGCAATATCATGCAGGCCCAAATGGAGAGGCTCTCGGAAAAGAAGAGAGGCTTTTTCAAGTGGAGGAAGTTTGGGTTTAAGAATGGCGGTGAGTCCGAGAGGGTGGACGACGGCGAAGTTGTGGAGGAGGAGGAGGACGCCGGGTTCGGGAGGCAGACGCCGGTGGATATTAAAACAAAGTTGGTCAAACGTAGGACGCCCACTAAGACATGGAGGAAATCTGTGTCTTGAAAATGTTTTATTTACAATGTTGGTTGGTCTATCTAACTTTGTCTTTATGTTTTTATGCATTATTATTATTATTATTTTTTTA

mRNA sequence

TCAAATTGGATGCGCATATTTTGCATTAATAACCTTTGTCTTCTTTTTCTCCTCTTATCACCTGCTCTGCTCTACTCTGTTTTCACCATTCTTCTCCCCAATTCCCACAAAATGAAGCACCAATCTCCGCCCCAGGATTCCGGCAAACTTTCCCCCGACCAATGCTACTGGTTTGACGATTCCGCCATTCTCGACATCGATTACTTCGTCAAAACCCTCGCCGCAATCAAGGCCAAAGGCGTTCGAACCGATTTAATCGGCTCTGTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAAGCCCTAGATCAACAAAAGGGGATTGATTTGACGAATTTCAACGAATCGCCGCAGAATGTGACGAATTCGTGGATGAAAAAGAAGTTCTTCGTCGAGACATTGGTCGGAGTTTTGCCGCCGGAGAGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTTCGGACGGCGAATATGGTGGGAGTGGAGCCTCCGTATAAGGCGGAGTTGGAGAAGAGGATTACGTGGCAGTTGGATCAAGCGTCGTTGAAGGAGGTGATGATTCCGTCGTTTAGTCACACGTGTGGGACGGTTTTGGATGTGGAGCTTGTGATTCGACTTGTGAAGAGGTTTGTTAGCTTGGACGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAATTGGTGGATTGTTACCTTGCTGAAGCGGCGATGGATTCTAATTTGGGATTGCTGGAGTTTGTTGAGCTCGCCGGAGTACTTCCCAGCCACGCCCGAGCCTCCGACGACGGACTGTACCGAGCCATTGATACGTATCTGAAAGCACATCCGAATATATCGAAGCAAGAAAGAAAGAGTTTATGCAGACTAATGGACAGCCGAAAGCTGTCCACAGAAGCATCACTCCACGCCGCCCAAAACGACCGCCTCCCCGTCCGCGCCGTAATCCAAGTCCTGTTCTCCGAGCAAACCAAGCTCAACTACCGCCACCTCGACTGGAGCGGCTCAATCGGGGGCAGGAGTCCCTCCGCAGCCCTCGACCACCTGCCCGCCAGGTGCCAATCCAAGAGAGAAATAACTGCCCAACAAATGGAGATTAAGAAGCTGAAAGAGACGGTGGTGAGGCTGCAGAACCAGTGCAATATCATGCAGGCCCAAATGGAGAGGCTCTCGGAAAAGAAGAGAGGCTTTTTCAAGTGGAGGAAGTTTGGGTTTAAGAATGGCGGTGAGTCCGAGAGGGTGGACGACGGCGAAGTTGTGGAGGAGGAGGAGGACGCCGGGTTCGGGAGGCAGACGCCGGTGGATATTAAAACAAAGTTGGTCAAACGTAGGACGCCCACTAAGACATGGAGGAAATCTGTGTCTTGAAAATGTTTTATTTACAATGTTGGTTGGTCTATCTAACTTTGTCTTTATGTTTTTATGCATTATTATTATTATTATTTTTTTA

Coding sequence (CDS)

ATGCGCATATTTTGCATTAATAACCTTTGTCTTCTTTTTCTCCTCTTATCACCTGCTCTGCTCTACTCTGTTTTCACCATTCTTCTCCCCAATTCCCACAAAATGAAGCACCAATCTCCGCCCCAGGATTCCGGCAAACTTTCCCCCGACCAATGCTACTGGTTTGACGATTCCGCCATTCTCGACATCGATTACTTCGTCAAAACCCTCGCCGCAATCAAGGCCAAAGGCGTTCGAACCGATTTAATCGGCTCTGTCATAACGCATTACGCTTCCAAATGGCTTCCGGATCTCTCCGACGAAGCCCTAGATCAACAAAAGGGGATTGATTTGACGAATTTCAACGAATCGCCGCAGAATGTGACGAATTCGTGGATGAAAAAGAAGTTCTTCGTCGAGACATTGGTCGGAGTTTTGCCGCCGGAGAGGGATTTGATTCCGTGTAATTTTTTGCTGAGGCTTCTTCGGACGGCGAATATGGTGGGAGTGGAGCCTCCGTATAAGGCGGAGTTGGAGAAGAGGATTACGTGGCAGTTGGATCAAGCGTCGTTGAAGGAGGTGATGATTCCGTCGTTTAGTCACACGTGTGGGACGGTTTTGGATGTGGAGCTTGTGATTCGACTTGTGAAGAGGTTTGTTAGCTTGGACGACGGCGTTAGGAGCGGCGCCGCCTTGGTTAAGGTGGCGAAATTGGTGGATTGTTACCTTGCTGAAGCGGCGATGGATTCTAATTTGGGATTGCTGGAGTTTGTTGAGCTCGCCGGAGTACTTCCCAGCCACGCCCGAGCCTCCGACGACGGACTGTACCGAGCCATTGATACGTATCTGAAAGCACATCCGAATATATCGAAGCAAGAAAGAAAGAGTTTATGCAGACTAATGGACAGCCGAAAGCTGTCCACAGAAGCATCACTCCACGCCGCCCAAAACGACCGCCTCCCCGTCCGCGCCGTAATCCAAGTCCTGTTCTCCGAGCAAACCAAGCTCAACTACCGCCACCTCGACTGGAGCGGCTCAATCGGGGGCAGGAGTCCCTCCGCAGCCCTCGACCACCTGCCCGCCAGGTGCCAATCCAAGAGAGAAATAACTGCCCAACAAATGGAGATTAAGAAGCTGAAAGAGACGGTGGTGAGGCTGCAGAACCAGTGCAATATCATGCAGGCCCAAATGGAGAGGCTCTCGGAAAAGAAGAGAGGCTTTTTCAAGTGGAGGAAGTTTGGGTTTAAGAATGGCGGTGAGTCCGAGAGGGTGGACGACGGCGAAGTTGTGGAGGAGGAGGAGGACGCCGGGTTCGGGAGGCAGACGCCGGTGGATATTAAAACAAAGTTGGTCAAACGTAGGACGCCCACTAAGACATGGAGGAAATCTGTGTCTTGA

Protein sequence

MRIFCINNLCLLFLLLSPALLYSVFTILLPNSHKMKHQSPPQDSGKLSPDQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDDGEVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS

Homology

[Close]

BLAST of Carg23161 vs. NCBI nr
Match: XP_022959818.1 (coleoptile phototropism protein 1-like [Cucurbita moschata])

HSP 1 Score: 890.2 bits (2299), Expect = 3.0e-255
Identity = 451/458 (98.47%), Postives = 453/458 (98.91%), Query Frame = 0


Query: 1   MRIFCINNLCLLFLLLSPALLYSVFTILLPNSHKMKHQSPPQDSGKLSPDQCYWFDDSAI 60
           MRIFCINNLCLLFLLLSPALLYSVFTILL NSHKMKHQSPPQDSGK+SPDQCYWFDDSAI
Sbjct: 1   MRIFCINNLCLLFLLLSPALLYSVFTILLSNSHKMKHQSPPQDSGKVSPDQCYWFDDSAI 60

Query: 61  LDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN 120
           LD+DYFVKTLA IKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN
Sbjct: 61  LDVDYFVKTLAGIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN 120

Query: 121 VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD 180
           VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD
Sbjct: 121 VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD 180

Query: 181 QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAA 240
           QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAA
Sbjct: 181 QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAA 240

Query: 241 MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLS 300
           MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHP ISKQERKSLCRLMDSRKLS
Sbjct: 241 MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPTISKQERKSLCRLMDSRKLS 300

Query: 301 TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKR 360
           TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSA LDHLPARCQSKR
Sbjct: 301 TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAVLDHLPARCQSKR 360

Query: 361 EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDDG 420
           EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNG ESERVDDG
Sbjct: 361 EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGVESERVDDG 420

Query: 421 EVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
           EVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS
Sbjct: 421 EVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 458

[Close]

BLAST of Carg23161 vs. NCBI nr
Match: XP_023513768.1 (coleoptile phototropism protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 882.9 bits (2280), Expect = 4.8e-253
Identity = 449/458 (98.03%), Postives = 450/458 (98.25%), Query Frame = 0


Query: 1   MRIFCINNLCLLFLLLSPALLYSVFTILLPNSHKMKHQSPPQDSGKLSPDQCYWFDDSAI 60
           MRIFCINNLCLL LLLSPALLYSVFTILL NSHKMKHQSPPQDSGKLSPDQCYWF DSAI
Sbjct: 1   MRIFCINNLCLLLLLLSPALLYSVFTILLSNSHKMKHQSPPQDSGKLSPDQCYWFHDSAI 60

Query: 61  LDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN 120
           LDIDYFVKTLA IKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN
Sbjct: 61  LDIDYFVKTLAGIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQN 120

Query: 121 VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD 180
           VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD
Sbjct: 121 VTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLD 180

Query: 181 QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAA 240
           QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFV+LDDGVRSGAALVKVAKLVDCYLAEAA
Sbjct: 181 QASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVNLDDGVRSGAALVKVAKLVDCYLAEAA 240

Query: 241 MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLS 300
           MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLS
Sbjct: 241 MDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLS 300

Query: 301 TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKR 360
           TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKR
Sbjct: 301 TEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKR 360

Query: 361 EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDDG 420
           EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDD 
Sbjct: 361 EITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDDS 420

Query: 421 EVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
             V EEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS
Sbjct: 421 GEVVEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 458

[Close]

BLAST of Carg23161 vs. NCBI nr
Match: XP_023004846.1 (coleoptile phototropism protein 1-like [Cucurbita maxima])

HSP 1 Score: 825.9 bits (2132), Expect = 6.9e-236
Identity = 420/438 (95.89%), Postives = 423/438 (96.58%), Query Frame = 0


Query: 21  LYSVFTILLPNSHKMKHQSPPQDSGKLSPDQCYWFDDSAILDIDYFVKTLAAIKAKGVRT 80
           L+S F   +P    MKHQSPPQDSGKLSPDQCYWF DSAILDIDYFVKTLA IKAKGVRT
Sbjct: 29  LFSPFFSPIPT---MKHQSPPQDSGKLSPDQCYWFHDSAILDIDYFVKTLAGIKAKGVRT 88

Query: 81  DLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLP 140
           DLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLP
Sbjct: 89  DLIGSVITHYASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLP 148

Query: 141 PERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVL 200
           PERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVL
Sbjct: 149 PERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVL 208

Query: 201 DVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSH 260
           DVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSH
Sbjct: 209 DVELVIRLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSH 268

Query: 261 ARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQ 320
           ARASDDGLYRAIDTYLK HPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQ
Sbjct: 269 ARASDDGLYRAIDTYLKTHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQ 328

Query: 321 VLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQ 380
           VLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETV+RLQ
Sbjct: 329 VLFSEQTKLNYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVLRLQ 388

Query: 381 NQCNIMQAQMERLSEKKRGFFKWRKFGFKNGGESERVDDGEVVEEEEDAGFGRQTPVDIK 440
           NQCNIMQ QMERLSEKKRGFFKWRKFGFKNGGESERVDDG  V EEEDAGFGRQTPVDIK
Sbjct: 389 NQCNIMQVQMERLSEKKRGFFKWRKFGFKNGGESERVDDGGEVVEEEDAGFGRQTPVDIK 448

Query: 441 TKLVKRRTPTKTWRKSVS 459
           TKLVKRRTPTKTWRKSVS
Sbjct: 449 TKLVKRRTPTKTWRKSVS 463

[Close]

BLAST of Carg23161 vs. NCBI nr
Match: XP_008461063.1 (PREDICTED: root phototropism protein 3 [Cucumis melo])

HSP 1 Score: 706.8 bits (1823), Expect = 4.7e-200
Identity = 372/451 (82.48%), Postives = 394/451 (87.36%), Query Frame = 0


Query: 37  HQSPPQDSGKLSP---------DQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVI 96
           HQSPPQ+SGK+SP         DQ YWFDDS ILDIDYFVKTLA IKAKGVR+DLIGS+I
Sbjct: 5   HQSPPQNSGKISPGPQFGDNNSDQSYWFDDSTILDIDYFVKTLAGIKAKGVRSDLIGSII 64

Query: 97  THYASKWLPDLSDEALD----------QQKGIDLTNFNESPQNVTNSWMKKKFFVETLVG 156
           THYASKWLPDLSDEAL+                     ESP++VTNSWMKK+FFVETLVG
Sbjct: 65  THYASKWLPDLSDEALNXXXXXXXXXXXXXXXXXXXXQESPESVTNSWMKKRFFVETLVG 124

Query: 157 VLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCG 216
           VLPPERDLIPCNFLLRLLRTANMVGVE PYKAELEKRITWQLDQASLKEVMIPSFSHTCG
Sbjct: 125 VLPPERDLIPCNFLLRLLRTANMVGVEAPYKAELEKRITWQLDQASLKEVMIPSFSHTCG 184

Query: 217 TVLDVELVIRLVKRFVSLDD--GVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAG 276
           TVLDVELVIRLVKRFVSL+D  GVRSGAALVKVAK+VDCYLAEAAMDSNLGL EFVELAG
Sbjct: 185 TVLDVELVIRLVKRFVSLEDGGGVRSGAALVKVAKMVDCYLAEAAMDSNLGLTEFVELAG 244

Query: 277 VLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPV 336
            LP+HAR SDDGLYRAIDTYLKAHPN+SKQERKS+C+LMDSRKLSTEASLHAAQN+RLPV
Sbjct: 245 ALPNHARGSDDGLYRAIDTYLKAHPNVSKQERKSICKLMDSRKLSTEASLHAAQNERLPV 304

Query: 337 RAVIQVLFSEQTKLNYRHLDWSGSI---GGRSPSAALDHLPARCQSKREITAQQMEIKKL 396
           RAVIQVLFSEQTKLNYRHLDWSGSI   GGRSPSAALDHLP RCQSKREITAQQMEIK+L
Sbjct: 305 RAVIQVLFSEQTKLNYRHLDWSGSIGGGGGRSPSAALDHLPTRCQSKREITAQQMEIKRL 364

Query: 397 KETVVRLQNQCNIMQAQMERLSEKKRG-FFKWRKFGFKN-GGESERVDDG---EVVEEEE 456
           K+TVVRLQNQCN+MQAQMERLSEKKRG FFKWRKFGFKN  G+ E++DDG       E  
Sbjct: 365 KDTVVRLQNQCNLMQAQMERLSEKKRGSFFKWRKFGFKNYVGDMEKLDDGGGEGXXXEMG 424

Query: 457 DAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
           + GFGRQTPVDIKTKLVKRRTPTKTWRKSVS
Sbjct: 425 EEGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 455

[Close]

BLAST of Carg23161 vs. NCBI nr
Match: XP_022145212.1 (coleoptile phototropism protein 1-like [Momordica charantia])

HSP 1 Score: 703.4 bits (1814), Expect = 5.2e-199
Identity = 366/436 (83.94%), Postives = 389/436 (89.22%), Query Frame = 0


Query: 35  MKHQSPPQDS----GKLS----PDQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSV 94
           + HQSPP DS     K S     DQ  WFDD+ ILDIDYFVKTL+ IKA GVRTDLIGS+
Sbjct: 5   LSHQSPPPDSLTFPAKFSQFGDADQFSWFDDATILDIDYFVKTLSGIKANGVRTDLIGSL 64

Query: 95  ITHYASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLPPERDLI 154
           I HYA+KWLPDLSDE         L NF+ESP++VTNSWMKK+FFVETLVGVLPPERDLI
Sbjct: 65  IAHYAAKWLPDLSDEP-------RLANFHESPESVTNSWMKKRFFVETLVGVLPPERDLI 124

Query: 155 PCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVI 214
           PCNFLLRLLRTA+MVGVEPPYKAELEKRITWQLDQASLKE+MIPSFSHTCGTVLDVELVI
Sbjct: 125 PCNFLLRLLRTASMVGVEPPYKAELEKRITWQLDQASLKELMIPSFSHTCGTVLDVELVI 184

Query: 215 RLVKRFVSLDDGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDD 274
           RLVKRFVSLDDGVRSGAALVKVAKLVD YL EAAMDSNLGL EFVELAG LPSHARA+DD
Sbjct: 185 RLVKRFVSLDDGVRSGAALVKVAKLVDSYLPEAAMDSNLGLSEFVELAGALPSHARATDD 244

Query: 275 GLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQ 334
           GLYRAIDTYLKAHP++SKQERKSLC+LMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSE 
Sbjct: 245 GLYRAIDTYLKAHPSLSKQERKSLCKLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEH 304

Query: 335 TKLNYRHLDWSGSIGG-RSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQNQCNI 394
           TKLNYRHLDWSGSIGG RSPSA LDHLP RCQSKREITAQQMEIK+LK+TV+RLQNQCNI
Sbjct: 305 TKLNYRHLDWSGSIGGARSPSAGLDHLPTRCQSKREITAQQMEIKRLKDTVIRLQNQCNI 364

Query: 395 MQAQMERLSEKKRGFFKWRKF---GFKNGGESERVDDGEVVEEEEDAGFGRQTPVDIKTK 454
           MQAQMERLSEKKRGFFKWRKF   GFK+GG+S +++DG   EEE   GFGRQTPVDIKTK
Sbjct: 365 MQAQMERLSEKKRGFFKWRKFGVPGFKHGGDSGKIEDGGEAEEE---GFGRQTPVDIKTK 424

Query: 455 LVKRRTPTKTWRKSVS 459
           LVKRRTPTKTWRKSVS
Sbjct: 425 LVKRRTPTKTWRKSVS 430

[Close]

BLAST of Carg23161 vs. TAIR10
Match: AT1G52770.1 (Phototropic-responsive NPH3 family protein)

HSP 1 Score: 483.0 bits (1242), Expect = 2.0e-136
Identity = 264/452 (58.41%), Postives = 330/452 (73.01%), Query Frame = 0


Query: 30  PNSHKMKHQSPPQDSGKLSPDQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITH 89
           P S  +  +SP   +GK+   +C WFDD  IL IDYFVKT+A IK+KGVR DLIGS+I H
Sbjct: 7   PESATISTKSPSTSTGKM---ECSWFDDGCILGIDYFVKTIAGIKSKGVRPDLIGSIIVH 66

Query: 90  YASKWLPDLSDEALDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCN 149
           YAS+WLPDLSD  L+               +VT   MKK+ FVETL+G++PPERD +PC+
Sbjct: 67  YASQWLPDLSDIVLNSDDQQPXXXXXXXXFSVTAFVMKKRSFVETLIGIIPPERDSVPCD 126

Query: 150 FLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLV 209
           FLLRLLRTANMVG +  YKAELE RI+WQLDQASLKE+MIPSFSHTCGT+LDVEL+ RLV
Sbjct: 127 FLLRLLRTANMVGADANYKAELEARISWQLDQASLKELMIPSFSHTCGTLLDVELMTRLV 186

Query: 210 KRFVSLD-DGVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGL 269
           K+F  LD +GV+SGA+L+KVAKLVD YLAEAA+D +L L EF+ L   LP+HAR ++DGL
Sbjct: 187 KKFAGLDNEGVKSGASLIKVAKLVDSYLAEAALDGDLTLSEFISLVEALPNHARVTEDGL 246

Query: 270 YRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTK 329
           YRAIDTYLKAHPN++KQERK LC L+DS KLS EASLHAAQNDRLPVR +IQVLFSEQ K
Sbjct: 247 YRAIDTYLKAHPNVTKQERKRLCGLIDSNKLSMEASLHAAQNDRLPVRTIIQVLFSEQAK 306

Query: 330 LNYR---HLDWSGS--IGGRS---PSAA--LDHLPARCQSKREITAQQMEIKKLKETVVR 389
           L++R   +++WSGS   G RS   PS +   D  PARC SKREI  QQ EI++L+E + +
Sbjct: 307 LSHRSHNNIEWSGSSFSGVRSSPNPSGSHYSDSGPARCTSKREINVQQAEIRRLREDMAK 366

Query: 390 LQNQCNIMQAQMERLSEKK-------RGFFKWRKFGFKNGGESERVDDGEVVE-----EE 449
           L+ +C  MQ Q+ +L EKK       +GFF+W+K GF++G     V++    E     E 
Sbjct: 367 LKCECEAMQTQLHKLVEKKGTCTSGNKGFFRWKKLGFRSGLSVSVVENTNGEEFGNNGEG 426

Query: 450 EDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
           E+  +  QTP ++ TKLVK RTP++ WRKS+S
Sbjct: 427 ENFEYVTQTPGNMMTKLVKGRTPSR-WRKSMS 454

[Close]

BLAST of Carg23161 vs. TAIR10
Match: AT3G15570.1 (Phototropic-responsive NPH3 family protein)

HSP 1 Score: 456.4 bits (1173), Expect = 2.0e-128
Identity = 253/425 (59.53%), Postives = 313/425 (73.65%), Query Frame = 0


Query: 54  WFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSD--EALDQQKGIDL 113
           +FD+S I D++YFVKT+  IK+KG+R DLIGS+I HYASKWLPDLS    A+     ++ 
Sbjct: 29  YFDESCIQDMNYFVKTITGIKSKGIRPDLIGSIIAHYASKWLPDLSGNVSAIISSTSLES 88

Query: 114 TNFNE--SPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKA 173
            N +    P++VT S MKK+FFVETL+G+LPPE+D +PCNFLLRLLRTA MVG  P Y  
Sbjct: 89  KNNHNDTQPESVTASVMKKRFFVETLIGILPPEKDSVPCNFLLRLLRTAKMVGANPNYLT 148

Query: 174 ELEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLD-DGVRSGAALVKV 233
           ELE R++WQLDQASLKE+MIPSFS+T GT+LD+ELV RLV +F  LD +GV++ AALVKV
Sbjct: 149 ELETRVSWQLDQASLKELMIPSFSYTSGTLLDIELVTRLVNKFSGLDSEGVKTAAALVKV 208

Query: 234 AKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERK 293
           AKLVD YLAEAA+D  L L EF+ L   LPSHAR ++DGLYRAIDTYLKAHP + KQERK
Sbjct: 209 AKLVDSYLAEAAVDGGLALPEFISLITALPSHARTTEDGLYRAIDTYLKAHPQVLKQERK 268

Query: 294 SLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDW-SGSIGG--RSP 353
            LCRL+DSRKLS EA+LHAAQNDRLPVRA+I VLF+EQTKL+ RH+D  S SI    RSP
Sbjct: 269 ELCRLIDSRKLSPEAALHAAQNDRLPVRAIIGVLFTEQTKLS-RHIDCNSSSISSTTRSP 328

Query: 354 -SAALDHL-----PARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKK-- 413
            +A+  H       ARC SKRE+  QQ EI++L+E VVRLQ+QC  M  Q+ERL EKK  
Sbjct: 329 TNASGSHYLEGGSAARCLSKREMNVQQAEIRRLREDVVRLQSQCGAMHFQLERLMEKKSS 388

Query: 414 ---RGFFKWRKFGF-KNGGESERVDDGEVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTW 459
              +GFF+W++ G   +   S  V+ GE    +   GF  +TP ++KT+LVK RT    W
Sbjct: 389 GGSKGFFRWKRLGLVPSIRGSVSVEKGEEESGDNGEGFEPRTPGNMKTRLVKGRTTPSRW 448

[Close]

BLAST of Carg23161 vs. TAIR10
Match: AT5G64330.1 (Phototropic-responsive NPH3 family protein)

HSP 1 Score: 250.4 bits (638), Expect = 2.2e-66
Identity = 177/526 (33.65%), Postives = 255/526 (48.48%), Query Frame = 0


Query: 39  SPPQDSGKLSPDQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDL 98
           SP +++        +WF+D +IL ID+FV+ + AIK KG+R +L+G+VI HYA KWLP L
Sbjct: 237 SPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGL 296

Query: 99  SDE-------ALDQQKGIDL----------TNFNESPQNVTNSW---------------- 158
             E       A+    G  L             N S  +    W                
Sbjct: 297 IKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNGH 356

Query: 159 --------------MKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAEL 218
                           ++  VE+L+ ++PP++D + C+FLLRLLR ANM+ V P    EL
Sbjct: 357 QDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITEL 416

Query: 219 EKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSG--------- 278
           EKR+  Q +QA+L++++IP +++   T+ DV+LV RL++ F+  +    S          
Sbjct: 417 EKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPS 476

Query: 279 -----------------------AALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPS 338
                                   A ++VA+LVD YL E A D NL L +F  LA  LP 
Sbjct: 477 QSMYADIPRGXXXXXXXXXXXXXXAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPE 536

Query: 339 HARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVI 398
            AR  DDGLYRAID+YLKAHP +S+ ERK LCR+MD +KLS +A +HAAQN+RLP+R V+
Sbjct: 537 SARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVV 596

Query: 399 QVLFSEQTKLNYRHLDWS--------GSIGGRSP-----SAALDHLPARCQ-----SKRE 458
           QVLFSEQ K++    + S         ++G   P        ++  P   Q     +K++
Sbjct: 597 QVLFSEQVKISNALANTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAAKKD 656

[Close]

BLAST of Carg23161 vs. TAIR10
Match: AT1G30440.1 (Phototropic-responsive NPH3 family protein)

HSP 1 Score: 216.1 bits (549), Expect = 4.6e-56
Identity = 134/385 (34.81%), Postives = 213/385 (55.32%), Query Frame = 0


Query: 53  YWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLT 112
           +W++D+++L    F + +  ++++G+R D+I   +T+Y  K LP L      ++ G + +
Sbjct: 215 WWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLK----RRRGGPESS 274

Query: 113 NFNESPQNVTN--SWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAE 172
               +P    N  S  ++K  +E +  +L  ++ L+P  F + +LR A ++   P   A 
Sbjct: 275 GRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAKILKASPDCIAN 334

Query: 173 LEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFV---------------SL 232
           LEKRI  QLDQA+L+++++PSFSHT  T+ DV+ V R++  F+               S+
Sbjct: 335 LEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIMPGGVGSPCSSV 394

Query: 233 DDGVRSGA-----ALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYR 292
           DDG   G+      +  VAKL+D YLAE A D NL L +F  LA  +P +AR  DDGLYR
Sbjct: 395 DDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYR 454

Query: 293 AIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKL- 352
           AID YLK HP +++ ER++LCRL+D +KLS EA  HAAQN+RLP+R ++QVLF EQ +L 
Sbjct: 455 AIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQLQLR 514

Query: 353 ---------------NYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKE 400
                            R L   G +GG  P            + RE    ++ +  ++ 
Sbjct: 515 TSVAGCFLVSDNLDGGSRQLRSGGYVGG--PXXXXXXXXXXATAVRENQVLKVGMDSMRM 574

[Close]

BLAST of Carg23161 vs. TAIR10
Match: AT5G03250.1 (Phototropic-responsive NPH3 family protein)

HSP 1 Score: 214.5 bits (545), Expect = 1.3e-55
Identity = 138/381 (36.22%), Postives = 218/381 (57.22%), Query Frame = 0


Query: 53  YWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLT 112
           +WFDD++ L +  F + + AI+A+G++ + I   + +Y  K +P ++ +    ++ I+  
Sbjct: 218 WWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLMNRQVNMDEQVIETP 277

Query: 113 NFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELE 172
           N +E  Q         K  +E +VG+LP ++ + P  FLLRLL+TA ++      +  LE
Sbjct: 278 NPSEEDQ---------KTCLEEIVGLLPSKKGVNPTKFLLRLLQTAMVLHASQSSRENLE 337

Query: 173 KRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVS-------------LDDG- 232
           +RI  QLDQA+L +++IP+  ++  T+ DVE V+R++++FVS             +++G 
Sbjct: 338 RRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLRMIEQFVSSTEQAGIVPSPCIIEEGH 397

Query: 233 -VRSGAALVK----VAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAID 292
            V+ GA L+     VA LVD YLAE A D NL L +F  +A  +P +AR  DDG+Y AID
Sbjct: 398 LVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVYHAID 457

Query: 293 TYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRH 352
            YLKAHP I+  ER+ +CRLM+ +KLS EAS HAAQN+RLP+R ++QVLF EQ +L    
Sbjct: 458 VYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRLRTSV 517

Query: 353 LDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERL 412
             W         S  LD+   +  +   +   + E   ++E V  L+ +C  M+ ++ +L
Sbjct: 518 SGWF------FVSENLDNPDNQHGANGGLLKPRGE--NVRERVSELEKECMNMKQELHKL 577

Query: 413 SEKKRGFFKW-RKFGFKNGGE 414
              KR +  + RK  FK   E
Sbjct: 578 VRTKRSWKNFTRKLNFKKKSE 580

[Close]

BLAST of Carg23161 vs. Swiss-Prot
Match: sp|Q9FMF5|RPT3_ARATH (Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2)

HSP 1 Score: 250.4 bits (638), Expect = 3.9e-65
Identity = 177/526 (33.65%), Postives = 255/526 (48.48%), Query Frame = 0


Query: 39  SPPQDSGKLSPDQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDL 98
           SP +++        +WF+D +IL ID+FV+ + AIK KG+R +L+G+VI HYA KWLP L
Sbjct: 237 SPSRNTNSQPVPPDWWFEDVSILRIDHFVRVITAIKVKGMRFELLGAVIMHYAGKWLPGL 296

Query: 99  SDE-------ALDQQKGIDL----------TNFNESPQNVTNSW---------------- 158
             E       A+    G  L             N S  +    W                
Sbjct: 297 IKEGGVAIAPAMSSAIGGGLGLGGDEMSISCGSNSSGGSSGPDWKGGLHMVLSAGKTNGH 356

Query: 159 --------------MKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAEL 218
                           ++  VE+L+ ++PP++D + C+FLLRLLR ANM+ V P    EL
Sbjct: 357 QDSVACLAGLGISPKDQRMIVESLISIIPPQKDSVTCSFLLRLLRAANMLKVAPALITEL 416

Query: 219 EKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSG--------- 278
           EKR+  Q +QA+L++++IP +++   T+ DV+LV RL++ F+  +    S          
Sbjct: 417 EKRVGMQFEQATLQDLLIPGYNNKGETMYDVDLVQRLLEHFLVQEQTEGSSPSRMSPSPS 476

Query: 279 -----------------------AALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPS 338
                                   A ++VA+LVD YL E A D NL L +F  LA  LP 
Sbjct: 477 QSMYADIPRGXXXXXXXXXXXXXXAKMRVARLVDSYLTEVARDRNLPLTKFQVLAEALPE 536

Query: 339 HARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVI 398
            AR  DDGLYRAID+YLKAHP +S+ ERK LCR+MD +KLS +A +HAAQN+RLP+R V+
Sbjct: 537 SARTCDDGLYRAIDSYLKAHPTLSEHERKRLCRVMDCQKLSMDACMHAAQNERLPLRVVV 596

Query: 399 QVLFSEQTKLNYRHLDWS--------GSIGGRSP-----SAALDHLPARCQ-----SKRE 458
           QVLFSEQ K++    + S         ++G   P        ++  P   Q     +K++
Sbjct: 597 QVLFSEQVKISNALANTSLKESTTLGEAMGTYQPMIPNRKTLIEATPQSFQEGWAAAKKD 656

[Close]

BLAST of Carg23161 vs. Swiss-Prot
Match: sp|Q5KS50|NPH3_ORYSJ (Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CPT1 PE=2 SV=1)

HSP 1 Score: 234.6 bits (597), Expect = 2.2e-60
Identity = 145/421 (34.44%), Postives = 210/421 (49.88%), Query Frame = 0


Query: 53  YWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEA---------- 112
           +WF+D ++L ID+FV+ + AIK KG+R DLIG+ ITHYASKWLP L+ +A          
Sbjct: 269 WWFEDVSVLRIDHFVRVVTAIKVKGMRFDLIGAAITHYASKWLPGLTKDAPLGATHDEPW 328

Query: 113 -------------LDQQKGIDLTNFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCN 172
                                                     VE+++ + PP+RD + C 
Sbjct: 329 AQASAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVVESIISITPPQRDSVSCG 388

Query: 173 FLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSF-SHTCGTVLDVELVIRL 232
           FLLRLLR A M+   P    ELEKR+  QL+QA+L +++IPS+      T  DV+LV RL
Sbjct: 389 FLLRLLRLAIMLRAAPALVTELEKRVGMQLEQAALADLLIPSYGGRAADTAYDVDLVQRL 448

Query: 233 VKRFVSLDDGVRSGA---------------------------------------ALVKVA 292
           V+ F+  +    + A                                       A  +VA
Sbjct: 449 VEHFLVQEQTEMAVASSPGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLNAKARVA 508

Query: 293 KLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKS 352
           +L+D YL+E + D NL L +F  LA  LP  ARA DDGLYRA+D+YLKAHP +++ ERK 
Sbjct: 509 RLLDSYLSEVSRDRNLSLTKFQVLAESLPESARACDDGLYRAVDSYLKAHPTLTEHERKR 568

Query: 353 LCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGGRSPSAAL 392
           LCR+MD +KLS +A +HAAQN+RLP+R V+QVLF+EQ K++      S            
Sbjct: 569 LCRVMDCQKLSFDACMHAAQNERLPLRVVVQVLFTEQVKISNALASSSAXXXXXXXXPGA 628

[Close]

BLAST of Carg23161 vs. Swiss-Prot
Match: sp|Q9S9Q9|Y1044_ARATH (BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=At1g30440 PE=1 SV=2)

HSP 1 Score: 216.1 bits (549), Expect = 8.2e-55
Identity = 134/385 (34.81%), Postives = 213/385 (55.32%), Query Frame = 0


Query: 53  YWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLT 112
           +W++D+++L    F + +  ++++G+R D+I   +T+Y  K LP L      ++ G + +
Sbjct: 215 WWYEDASMLSFPLFKRLITVMESRGIREDIIAGSLTYYTRKHLPGLK----RRRGGPESS 274

Query: 113 NFNESPQNVTN--SWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAE 172
               +P    N  S  ++K  +E +  +L  ++ L+P  F + +LR A ++   P   A 
Sbjct: 275 GRFSTPLGSGNVLSEEEQKNLLEEIQELLRMQKGLVPTKFFVDMLRIAKILKASPDCIAN 334

Query: 173 LEKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFV---------------SL 232
           LEKRI  QLDQA+L+++++PSFSHT  T+ DV+ V R++  F+               S+
Sbjct: 335 LEKRIGMQLDQAALEDLVMPSFSHTMETLYDVDSVQRILDHFLGTDQIMPGGVGSPCSSV 394

Query: 233 DDGVRSGA-----ALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYR 292
           DDG   G+      +  VAKL+D YLAE A D NL L +F  LA  +P +AR  DDGLYR
Sbjct: 395 DDGNLIGSPQSITPMTAVAKLIDGYLAEVAPDVNLKLPKFQALAASIPEYARLLDDGLYR 454

Query: 293 AIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKL- 352
           AID YLK HP +++ ER++LCRL+D +KLS EA  HAAQN+RLP+R ++QVLF EQ +L 
Sbjct: 455 AIDIYLKHHPWLAETERENLCRLLDCQKLSLEACTHAAQNERLPLRIIVQVLFFEQLQLR 514

Query: 353 ---------------NYRHLDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKE 400
                            R L   G +GG  P            + RE    ++ +  ++ 
Sbjct: 515 TSVAGCFLVSDNLDGGSRQLRSGGYVGG--PXXXXXXXXXXATAVRENQVLKVGMDSMRM 574

[Close]

BLAST of Carg23161 vs. Swiss-Prot
Match: sp|Q9LYW0|Y5325_ARATH (BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=At5g03250 PE=2 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 2.4e-54
Identity = 138/381 (36.22%), Postives = 218/381 (57.22%), Query Frame = 0


Query: 53  YWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLT 112
           +WFDD++ L +  F + + AI+A+G++ + I   + +Y  K +P ++ +    ++ I+  
Sbjct: 218 WWFDDASFLSLPLFKRLITAIEARGMKLENIAMAVMYYTRKHVPLMNRQVNMDEQVIETP 277

Query: 113 NFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELE 172
           N +E  Q         K  +E +VG+LP ++ + P  FLLRLL+TA ++      +  LE
Sbjct: 278 NPSEEDQ---------KTCLEEIVGLLPSKKGVNPTKFLLRLLQTAMVLHASQSSRENLE 337

Query: 173 KRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVS-------------LDDG- 232
           +RI  QLDQA+L +++IP+  ++  T+ DVE V+R++++FVS             +++G 
Sbjct: 338 RRIGNQLDQAALVDLLIPNMGYS-ETLYDVECVLRMIEQFVSSTEQAGIVPSPCIIEEGH 397

Query: 233 -VRSGAALVK----VAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAID 292
            V+ GA L+     VA LVD YLAE A D NL L +F  +A  +P +AR  DDG+Y AID
Sbjct: 398 LVKDGADLLTPTTLVATLVDGYLAEVAPDVNLKLAKFEAIAAAIPDYARPLDDGVYHAID 457

Query: 293 TYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRH 352
            YLKAHP I+  ER+ +CRLM+ +KLS EAS HAAQN+RLP+R ++QVLF EQ +L    
Sbjct: 458 VYLKAHPWITDSEREHICRLMNCQKLSLEASTHAAQNERLPLRVIVQVLFFEQLRLRTSV 517

Query: 353 LDWSGSIGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERL 412
             W         S  LD+   +  +   +   + E   ++E V  L+ +C  M+ ++ +L
Sbjct: 518 SGWF------FVSENLDNPDNQHGANGGLLKPRGE--NVRERVSELEKECMNMKQELHKL 577

Query: 413 SEKKRGFFKW-RKFGFKNGGE 414
              KR +  + RK  FK   E
Sbjct: 578 VRTKRSWKNFTRKLNFKKKSE 580

[Close]

BLAST of Carg23161 vs. Swiss-Prot
Match: sp|Q9FNB3|Y5360_ARATH (Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana OX=3702 GN=At5g13600 PE=3 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 9.4e-51
Identity = 130/390 (33.33%), Postives = 212/390 (54.36%), Query Frame = 0


Query: 53  YWFDD-SAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDL 112
           +WF+D S+ LD+  + + +  ++++GV   +I + +THYA + LP L           + 
Sbjct: 209 WWFNDVSSFLDLPMYKRFIKTVESRGVNAGIIAASVTHYAKRNLPLLGCSRKSGSPSEEG 268

Query: 113 TNFNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAEL 172
           TN+ +   ++  S  +++  +E +V +LP ++ +    FLLRLLRT+ ++      +  L
Sbjct: 269 TNYGD---DMYYSHEEQRSLLEEIVELLPGKKCVTSTKFLLRLLRTSMVLHASQVTQETL 328

Query: 173 EKRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRF-VSLDDGV----------R 232
           EKRI  QLD+A+L++++IP+  ++  T+ D + V R++  F ++ D  +           
Sbjct: 329 EKRIGMQLDEAALEDLLIPNMKYSGETLYDTDSVQRILDHFMLTFDSSIVEEKQMMGDSH 388

Query: 233 SGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHP 292
              ++ KVA L+D YLAE A D NL L +F  L  ++P   R  DDG+YRAID Y+KAHP
Sbjct: 389 PLKSITKVASLIDGYLAEVASDENLKLSKFQALGALIPEDVRPMDDGIYRAIDIYIKAHP 448

Query: 293 NISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDW-SGS 352
            +++ ER+ LC LM+ +KLS EA  HAAQN+RLP+R ++QVLF EQ +L      W  GS
Sbjct: 449 WLTESEREQLCLLMNCQKLSLEACTHAAQNERLPLRVIVQVLFFEQMRLRTSIAGWLFGS 508

Query: 353 IGGRSPSAALDHLPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRG 412
                 S AL+          + T   M +  ++E V  L+ +C  M+  +++L + K G
Sbjct: 509 EENNDTSGALE--------GNKNTNANMVMHGMRERVFELEKECMSMKQDLDKLVKTKEG 568

Query: 413 FFKWRKFGFKNGGESERVDDGEVVEEEEDA 430
               R F  K  G   +       +  EDA
Sbjct: 569 ----RNFFSKIFGSRSKTKTSPCGKGGEDA 583

[Close]

BLAST of Carg23161 vs. TrEMBL
Match: tr|A0A1S3CDV4|A0A1S3CDV4_CUCME (root phototropism protein 3 OS=Cucumis melo OX=3656 GN=LOC103499766 PE=3 SV=1)

HSP 1 Score: 706.8 bits (1823), Expect = 3.1e-200
Identity = 372/451 (82.48%), Postives = 394/451 (87.36%), Query Frame = 0


Query: 37  HQSPPQDSGKLSP---------DQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVI 96
           HQSPPQ+SGK+SP         DQ YWFDDS ILDIDYFVKTLA IKAKGVR+DLIGS+I
Sbjct: 5   HQSPPQNSGKISPGPQFGDNNSDQSYWFDDSTILDIDYFVKTLAGIKAKGVRSDLIGSII 64

Query: 97  THYASKWLPDLSDEALD----------QQKGIDLTNFNESPQNVTNSWMKKKFFVETLVG 156
           THYASKWLPDLSDEAL+                     ESP++VTNSWMKK+FFVETLVG
Sbjct: 65  THYASKWLPDLSDEALNXXXXXXXXXXXXXXXXXXXXQESPESVTNSWMKKRFFVETLVG 124

Query: 157 VLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTCG 216
           VLPPERDLIPCNFLLRLLRTANMVGVE PYKAELEKRITWQLDQASLKEVMIPSFSHTCG
Sbjct: 125 VLPPERDLIPCNFLLRLLRTANMVGVEAPYKAELEKRITWQLDQASLKEVMIPSFSHTCG 184

Query: 217 TVLDVELVIRLVKRFVSLDD--GVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELAG 276
           TVLDVELVIRLVKRFVSL+D  GVRSGAALVKVAK+VDCYLAEAAMDSNLGL EFVELAG
Sbjct: 185 TVLDVELVIRLVKRFVSLEDGGGVRSGAALVKVAKMVDCYLAEAAMDSNLGLTEFVELAG 244

Query: 277 VLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLPV 336
            LP+HAR SDDGLYRAIDTYLKAHPN+SKQERKS+C+LMDSRKLSTEASLHAAQN+RLPV
Sbjct: 245 ALPNHARGSDDGLYRAIDTYLKAHPNVSKQERKSICKLMDSRKLSTEASLHAAQNERLPV 304

Query: 337 RAVIQVLFSEQTKLNYRHLDWSGSI---GGRSPSAALDHLPARCQSKREITAQQMEIKKL 396
           RAVIQVLFSEQTKLNYRHLDWSGSI   GGRSPSAALDHLP RCQSKREITAQQMEIK+L
Sbjct: 305 RAVIQVLFSEQTKLNYRHLDWSGSIGGGGGRSPSAALDHLPTRCQSKREITAQQMEIKRL 364

Query: 397 KETVVRLQNQCNIMQAQMERLSEKKRG-FFKWRKFGFKN-GGESERVDDG---EVVEEEE 456
           K+TVVRLQNQCN+MQAQMERLSEKKRG FFKWRKFGFKN  G+ E++DDG       E  
Sbjct: 365 KDTVVRLQNQCNLMQAQMERLSEKKRGSFFKWRKFGFKNYVGDMEKLDDGGGEGXXXEMG 424

Query: 457 DAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
           + GFGRQTPVDIKTKLVKRRTPTKTWRKSVS
Sbjct: 425 EEGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 455

[Close]

BLAST of Carg23161 vs. TrEMBL
Match: tr|A0A0A0KA98|A0A0A0KA98_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433900 PE=3 SV=1)

HSP 1 Score: 695.7 bits (1794), Expect = 7.2e-197
Identity = 371/456 (81.36%), Postives = 388/456 (85.09%), Query Frame = 0


Query: 37  HQSPPQDSGKLSP---------DQCYWFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVI 96
           HQSP   SGK+SP         DQ YWFDDS ILDIDYFVKTLA IKAKGVR+DLIGSVI
Sbjct: 4   HQSPSHSSGKISPGPQFPDNNSDQSYWFDDSTILDIDYFVKTLAGIKAKGVRSDLIGSVI 63

Query: 97  THYASKWLPDLSDEAL-----------DQQKGIDLTNFNESPQNVTNSWMKKKFFVETLV 156
           THYASKWLPDLSDEAL                    +F ESP++VTNSWMKK+FFVETLV
Sbjct: 64  THYASKWLPDLSDEALXXXXXXXXXXXXXXXXXXXXSFQESPESVTNSWMKKRFFVETLV 123

Query: 157 GVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEKRITWQLDQASLKEVMIPSFSHTC 216
           GVLPPERDLIPCNFLLRLLRTANMVGVE PYKAELEKRITWQLDQASLKEVMIPSFSHTC
Sbjct: 124 GVLPPERDLIPCNFLLRLLRTANMVGVEAPYKAELEKRITWQLDQASLKEVMIPSFSHTC 183

Query: 217 GTVLDVELVIRLVKRFVSLDD--GVRSGAALVKVAKLVDCYLAEAAMDSNLGLLEFVELA 276
           GTVLDVELVIRLVKRFVSL+D  GVRSGAALVKVAKLVDCYLAEAAMDSNLGL EFVELA
Sbjct: 184 GTVLDVELVIRLVKRFVSLEDGGGVRSGAALVKVAKLVDCYLAEAAMDSNLGLTEFVELA 243

Query: 277 GVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRLMDSRKLSTEASLHAAQNDRLP 336
           G LP+HARASDDGLYRAIDTYLKAHPN+SKQERKS+C+LMDSRKLSTEASLHAAQN+RLP
Sbjct: 244 GALPNHARASDDGLYRAIDTYLKAHPNVSKQERKSICKLMDSRKLSTEASLHAAQNERLP 303

Query: 337 VRAVIQVLFSEQTKLNYRHLDWSGSI---GGRSPSAALDHLPARCQSKREITAQQMEIKK 396
           VRAVIQVLFSEQTKLNYRHLDWSGSI   GGRSPSAALDHLP RCQSKREITAQQMEIK+
Sbjct: 304 VRAVIQVLFSEQTKLNYRHLDWSGSIGGGGGRSPSAALDHLPTRCQSKREITAQQMEIKR 363

Query: 397 LKETVVRLQNQCNIMQAQMERLSEKKR--GFFKWRKFGFKN-GGESERVD------DGEV 456
           LK+TVVRLQNQCN+MQAQMERLSEKKR   FFKWRKFGFKN  G+ E+VD          
Sbjct: 364 LKDTVVRLQNQCNLMQAQMERLSEKKRSGSFFKWRKFGFKNYVGDLEKVDXXXXXXXXXX 423

Query: 457 VEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
                  GFGRQTPVDIKTKLVKRRTPTKTWRKSVS
Sbjct: 424 XXXXXXXGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459

[Close]

BLAST of Carg23161 vs. TrEMBL
Match: tr|A0A061GB09|A0A061GB09_THECC (Phototropic-responsive NPH3 family protein OS=Theobroma cacao OX=3641 GN=TCM_028436 PE=3 SV=1)

HSP 1 Score: 567.4 bits (1461), Expect = 2.9e-158
Identity = 296/411 (72.02%), Postives = 345/411 (83.94%), Query Frame = 0


Query: 54  WFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTN 113
           WFDD+ ILD+DYFVKT++ IKAKGVR DLIGS+I HYASKWLPDLS    + +KG  LTN
Sbjct: 22  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLSSN--NTEKG--LTN 81

Query: 114 FNE-SPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELE 173
           F E SP++VT SWMKK+FFVETLVG+LPPERD +PCNFLLRLLRTANMVGVEP Y+AELE
Sbjct: 82  FEESSPESVTASWMKKRFFVETLVGILPPERDSVPCNFLLRLLRTANMVGVEPSYRAELE 141

Query: 174 KRITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLV 233
           KRI+WQLDQASLKE+MIPSFSHTCGT+LDVELVIRLVKRF SLD+G RSGAALVK AKLV
Sbjct: 142 KRISWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFASLDEGARSGAALVKAAKLV 201

Query: 234 DCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCR 293
           DCYLAEAA+D+NL L EF+ L G LPSHARA DDGLYRAIDTYLKAHP + KQ+RK LCR
Sbjct: 202 DCYLAEAALDTNLSLDEFIALGGALPSHARAMDDGLYRAIDTYLKAHPGVPKQDRKVLCR 261

Query: 294 LMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGG-RSPSAALDH 353
           L+DSRKLS EASLHAAQN+RLPVRAVIQVLFSEQTKL+ RH+DWSGS  G RSP+  L+ 
Sbjct: 262 LIDSRKLSPEASLHAAQNERLPVRAVIQVLFSEQTKLS-RHIDWSGSFSGTRSPNPGLE- 321

Query: 354 LPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRGFFKWRKFGFKNG 413
            PARC SKRE+ AQQMEIKKLKE ++++Q+QC  MQ QME++ +KK+GFF+WRK G K  
Sbjct: 322 APARCLSKREMNAQQMEIKKLKEDLLKVQSQCIAMQMQMEKMLDKKKGFFRWRKLGLKPS 381

Query: 414 GES-----ERVDDGEVVEEEEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSV 458
            +S     E++++G   E E +  FG QTP+D+K KLV+ RTP K WRKS+
Sbjct: 382 FKSSVSVFEKIEEG---EGEGEVAFGLQTPMDMKAKLVRGRTPPK-WRKSM 422

[Close]

BLAST of Carg23161 vs. TrEMBL
Match: tr|A0A2N9IVF4|A0A2N9IVF4_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56420 PE=3 SV=1)

HSP 1 Score: 566.6 bits (1459), Expect = 5.0e-158
Identity = 299/408 (73.28%), Postives = 342/408 (83.82%), Query Frame = 0


Query: 54  WFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTN 113
           WFDD+ ILD+DYFVKTL+ IK KGV  DLIGS+ITHYASKWLPDLS      +K   LTN
Sbjct: 24  WFDDACILDMDYFVKTLSGIKGKGVHPDLIGSIITHYASKWLPDLSGGENVAEK--SLTN 83

Query: 114 FNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEK 173
             ESP+++T SWMKK+FFVETLVGVLPPE+D IPCNFLLRLLRTANMVGVEP Y+ ELEK
Sbjct: 84  VKESPESITASWMKKRFFVETLVGVLPPEKDSIPCNFLLRLLRTANMVGVEPTYRTELEK 143

Query: 174 RITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLDDGVRSGAALVKVAKLVD 233
           RITWQLDQASLKE+MIPSFSHTCGT+LDVELVIRLVKRFVSLD+  RSGAAL+KVAKLVD
Sbjct: 144 RITWQLDQASLKELMIPSFSHTCGTLLDVELVIRLVKRFVSLDEAARSGAALIKVAKLVD 203

Query: 234 CYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCRL 293
           CYLAEAA+DSNL L EFV LAG LPSHARA+DDGLYRAIDTYLKAHPN SKQERK+LCRL
Sbjct: 204 CYLAEAAVDSNLSLSEFVALAGGLPSHARATDDGLYRAIDTYLKAHPNTSKQERKNLCRL 263

Query: 294 MDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGG-RSPSAALDHL 353
           +DSRKLS EASLHAAQN+RLPVRAVIQV+FSEQ+K++ R +DWSGS    RSP+  LD  
Sbjct: 264 IDSRKLSPEASLHAAQNERLPVRAVIQVIFSEQSKIS-RQIDWSGSFSSTRSPNIGLDP- 323

Query: 354 PARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKR-GFFKWRKFGFKNG 413
           P RC SKRE+ AQQ+EIK+LK+ V+RLQ  CN MQAQ+E++ EK R G FKW+KFG  + 
Sbjct: 324 PTRCHSKREVMAQQVEIKRLKDDVLRLQCHCNSMQAQLEKVLEKNRKGIFKWKKFGMPS- 383

Query: 414 GESERVDDGEVVEE-EEDAGFGRQTPVDIKTKLVKRRTPTKTWRKSVS 459
            +S  V   E +EE EE+ GFGR TP+D+KTKLV+ R P K WRKS+S
Sbjct: 384 FKSVSVSVVEKIEEGEEEVGFGRHTPMDMKTKLVRSRNPPK-WRKSMS 425

[Close]

BLAST of Carg23161 vs. TrEMBL
Match: tr|A0A2H5QCL0|A0A2H5QCL0_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_217240 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 9.5e-157
Identity = 299/417 (71.70%), Postives = 347/417 (83.21%), Query Frame = 0


Query: 54  WFDDSAILDIDYFVKTLAAIKAKGVRTDLIGSVITHYASKWLPDLSDEALDQQKGIDLTN 113
           WFDD+ ILD+DYFVKT++ IKAKGVR DLIGS+I HYASKWLPDL+ E  D  KG  LTN
Sbjct: 24  WFDDACILDMDYFVKTISGIKAKGVRPDLIGSIIAHYASKWLPDLAYE--DANKG--LTN 83

Query: 114 FNESPQNVTNSWMKKKFFVETLVGVLPPERDLIPCNFLLRLLRTANMVGVEPPYKAELEK 173
           F ESP++VT SWMKK+FFVETLVG+LPPE+D +PCNF LRLLRTANMV VEP Y+ ELEK
Sbjct: 84  FEESPESVTASWMKKRFFVETLVGILPPEKDSLPCNFFLRLLRTANMVNVEPAYREELEK 143

Query: 174 RITWQLDQASLKEVMIPSFSHTCGTVLDVELVIRLVKRFVSLD-DGVRSGAALVKVAKLV 233
           RI+WQLDQASLKE+MIPSFSHTCGT+LDVELV RLVK+FV LD +G +SGAALVKVAKLV
Sbjct: 144 RISWQLDQASLKELMIPSFSHTCGTLLDVELVSRLVKKFVHLDIEGAKSGAALVKVAKLV 203

Query: 234 DCYLAEAAMDSNLGLLEFVELAGVLPSHARASDDGLYRAIDTYLKAHPNISKQERKSLCR 293
           DCYLAEAAMDSNL L EFV LAG LPSHARA+DDGLYRAIDTYLKAHP ++KQERKSLCR
Sbjct: 204 DCYLAEAAMDSNLSLSEFVALAGALPSHARATDDGLYRAIDTYLKAHPEVTKQERKSLCR 263

Query: 294 LMDSRKLSTEASLHAAQNDRLPVRAVIQVLFSEQTKLNYRHLDWSGSIGG-RSPSAALDH 353
           L+DSRKLS EASLHAAQNDRLPVRAVIQVLFSEQ KLN + LDWSGS  G RSP+   D 
Sbjct: 264 LIDSRKLSPEASLHAAQNDRLPVRAVIQVLFSEQAKLN-KQLDWSGSFSGIRSPNIGFDP 323

Query: 354 LPARCQSKREITAQQMEIKKLKETVVRLQNQCNIMQAQMERLSEKKRG-FFKWRKFG--- 413
             ARC SKRE+ AQQMEI+KL+E V+RLQ+QCN MQ Q+E+L EKK+G FF+W+K G   
Sbjct: 324 SAARCLSKREVGAQQMEIRKLREEVLRLQSQCNAMQVQIEKLVEKKKGTFFRWKKLGIIP 383

Query: 414 -FKNGGES--ERVDDGEVVEEEEDAGFGRQTPVDIKTKLVKRR---TPT-KTWRKSV 458
             K+G  S  +R+++G   + E +A FGRQTP+D+KTKLV+ +   TP  + WRKS+
Sbjct: 384 SIKSGSISVVDRIEEG---DREGEAAFGRQTPIDLKTKLVRGKNSNTPKHRQWRKSL 432

The following BLAST results are available for this feature:

BLAST of Carg23161 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022959818.1	3.0e-255	98.47	coleoptile phototropism protein 1-like [Cucurbita moschata]	[more]
XP_023513768.1	4.8e-253	98.03	coleoptile phototropism protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023004846.1	6.9e-236	95.89	coleoptile phototropism protein 1-like [Cucurbita maxima]	[more]
XP_008461063.1	4.7e-200	82.48	PREDICTED: root phototropism protein 3 [Cucumis melo]	[more]
XP_022145212.1	5.2e-199	83.94	coleoptile phototropism protein 1-like [Momordica charantia]	[more]

BLAST of Carg23161 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G52770.1	2.0e-136	58.41	Phototropic-responsive NPH3 family protein	[more]
AT3G15570.1	2.0e-128	59.53	Phototropic-responsive NPH3 family protein	[more]
AT5G64330.1	2.2e-66	33.65	Phototropic-responsive NPH3 family protein	[more]
AT1G30440.1	4.6e-56	34.81	Phototropic-responsive NPH3 family protein	[more]
AT5G03250.1	1.3e-55	36.22	Phototropic-responsive NPH3 family protein	[more]

BLAST of Carg23161 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FMF5\|RPT3_ARATH	3.9e-65	33.65	Root phototropism protein 3 OS=Arabidopsis thaliana OX=3702 GN=RPT3 PE=1 SV=2	[more]
sp\|Q5KS50\|NPH3_ORYSJ	2.2e-60	34.44	Coleoptile phototropism protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=CP...	[more]
sp\|Q9S9Q9\|Y1044_ARATH	8.2e-55	34.81	BTB/POZ domain-containing protein At1g30440 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
sp\|Q9LYW0\|Y5325_ARATH	2.4e-54	36.22	BTB/POZ domain-containing protein At5g03250 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
sp\|Q9FNB3\|Y5360_ARATH	9.4e-51	33.33	Putative BTB/POZ domain-containing protein At5g13600 OS=Arabidopsis thaliana OX=...	[more]

BLAST of Carg23161 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CDV4\|A0A1S3CDV4_CUCME	3.1e-200	82.48	root phototropism protein 3 OS=Cucumis melo OX=3656 GN=LOC103499766 PE=3 SV=1	[more]
tr\|A0A0A0KA98\|A0A0A0KA98_CUCSA	7.2e-197	81.36	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G433900 PE=3 SV=1	[more]
tr\|A0A061GB09\|A0A061GB09_THECC	2.9e-158	72.02	Phototropic-responsive NPH3 family protein OS=Theobroma cacao OX=3641 GN=TCM_028...	[more]
tr\|A0A2N9IVF4\|A0A2N9IVF4_FAGSY	5.0e-158	73.28	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS56420 PE=3 SV=1	[more]
tr\|A0A2H5QCL0\|A0A2H5QCL0_CITUN	9.5e-157	71.70	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_217240 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR027356	NPH3_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23161-RA	Carg23161-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 362..396
None	No IPR available	PANTHER	PTHR32370	FAMILY NOT NAMED	coord: 47..457
None	No IPR available	PANTHER	PTHR32370:SF16	NON-PHOTOTROPIC HYPOCOTYL-LIKE PROTEIN	coord: 47..457
IPR027356	NPH3 domain	PFAM	PF03000	NPH3	coord: 53..304 e-value: 6.3E-83 score: 278.3
IPR027356	NPH3 domain	PROSITE	PS51649	NPH3	coord: 52..328 score: 84.179

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23161	Cla015399	Watermelon (97103) v1	carwmB0138
Carg23161	Csa7G433900	Cucumber (Chinese Long) v2	carcuB0161
Carg23161	MELO3C023387	Melon (DHL92) v3.5.1	carmeB0149
Carg23161	ClCG09G002530	Watermelon (Charleston Gray)	carwcgB0139
Carg23161	CSPI07G20950	Wild cucumber (PI 183967)	carcpiB0167
Carg23161	Cucsa.004640	Cucumber (Gy14) v1	carcgyB0178
Carg23161	CmaCh08G006340	Cucurbita maxima (Rimu)	carcmaB0193
Carg23161	CmaCh17G008360	Cucurbita maxima (Rimu)	carcmaB0191
Carg23161	CmoCh08G006220	Cucurbita moschata (Rifu)	carcmoB0199
Carg23161	CmoCh17G008070	Cucurbita moschata (Rifu)	carcmoB0197
Carg23161	Lsi02G027460	Bottle gourd (USVL1VR-Ls)	carlsiB131
Carg23161	Cp4.1LG12g07710	Cucurbita pepo (Zucchini)	carcpeB0208
Carg23161	Cp4.1LG17g09040	Cucurbita pepo (Zucchini)	carcpeB0210
Carg23161	CsGy7G019190	Cucumber (Gy14) v2	carcgybB0159
Carg23161	MELO3C023387.2	Melon (DHL92) v3.6.1	carmedB0152
Carg23161	CsaV3_7G032790	Cucumber (Chinese Long) v3	carcucB0168
Carg23161	Cla97C09G164670	Watermelon (97103) v2	carwmbB0151
Carg23161	Bhi09G000054	Wax gourd	carwgoB0184

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23161	Carg09562	Silver-seed gourd	carcarB170

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23161	Wax gourd	carwgoB0183
Carg23161	Silver-seed gourd	carcarB169
Carg23161	Cucumber (Gy14) v2	carcgybB0158
Carg23161	Cucurbita maxima (Rimu)	carcmaB0192
Carg23161	Cucurbita moschata (Rifu)	carcmoB0198
Carg23161	Cucurbita pepo (Zucchini)	carcpeB0209
Carg23161	Wild cucumber (PI 183967)	carcpiB0166
Carg23161	Cucumber (Chinese Long) v2	carcuB0160
Carg23161	Cucumber (Chinese Long) v3	carcucB0167
Carg23161	Bottle gourd (USVL1VR-Ls)	carlsiB130
Carg23161	Melon (DHL92) v3.5.1	carmeB0148
Carg23161	Melon (DHL92) v3.6.1	carmedB0151
Carg23161	Watermelon (Charleston Gray)	carwcgB0140
Carg23161	Watermelon (97103) v1	carwmB0139
Carg23161	Watermelon (97103) v2	carwmbB0152