Carg23150 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23150
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Acyl-[acyl-carrier-protein] hydrolase
Location	Cucurbita_argyrosperma_scaffold_194 : 162783 .. 164450 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCACTCATATGTTCATCAAATGGCTCCCATTTTGGTATGGAATTAGTATCAATTTCAACGAGGGAACCAACATTTGGACATGCCACCACACCCAGTTTGCACCTCAAAGGCCGACCCAAAAGTGCCTCTCTTACCCTCAAATCTTCTCACATTTCTCAACCCATTGCAGGTAAGTTGATGATGATATTAAAGATCTTGCCTTTTCCAACCCTTCTTTTGTGGGTCACTCTCCTTTTTTGGTAGGTGGGTTCAAGAGGATCGACGATTACATGTCGAGAAAACCCGAGATAACTCGTGAGAATTTAATGGTGGAAGAGTTTTTGAACGATGGTTTGGTTTACCAATGTCATTTTTTGGTGAGATCATACGAGTCGGGACCTGATAATAAAATGACAATGTTTTTCGTCATCAACCAGTTACAGGTTCTAAGTTTGTTTGTTAAAAAAAAAAAAAAACATGTCTATAAATGAAATGTGAATCTCTTTTGACATGTGGGTTTTGATTAGGAGTCGAAACTAAATCACTTCATAAGTTGTGGATTGGTCGAAAGGGGATTGGGCAAGACGGGATTTGGCACAACACATGAAATGACTAAAAGGGACCTCATATGGGTCGTGCATAAATTGCAAGTAGTGGTCGACCAATTTCCTTCTTGGTAAATATAACATATTTTTTTACATTCCCGTGTTGCTAAGATGTTCGAGTAACGTAGTTTTAAAACACGAATTTTGAAGGAACGATGTCGTTGAACTTCGTACGTGGATATGTAAACATGGGAAGAATAGCTATCGTCGAAACTGGATCGCTCGTGACAAGAAAAGTGGAAAAGTTTTGATCCGTGCAATTTGGTTTGTTCTTGATCCCGATACGAACGCCATTGAAATTGAAACAAGTCTATGTTTTGATATTTCGTTTGCATTGCAGTTTCTATGTTTTGATGAACAAAAGAACAAGAAAATTATCCAGATTTTGTGAAGAATTAAAGGAGGAAATGAATCCATTCTTCTTAGACAGCCATCCAATCCTTGAGGAAGATAACATCGTCTCACAAAAACTACATTTTCATCAACATTATTGCACCCATGCGTCTTTAGTTGTAAGTTTTAATTTTAATAACTCTTTATTTATTTATTTTTTTTTATTTAATTTAATTTTACTCCTGACTCTTCAAATATTGGTAGACGAGACTGAGCGATTTGGATATGAATCAGCACATTAACAATGCCAGTTATATCAACTTCGTTCTCGAGGTATATTTACCTACCTTTTTCTCGTCATAAATAATTTCTTTTATTTATTTAAATCTTTAATTTGTTTTTCAAAATTCAATTAAAATGTTTGAAAAAAAAAATAGAATTGACTATGAAAAACACTACGAAAACAATTTTCTAACGAGAATGAGAAAAAAAAATGTCAATATTTTGGTTTTAGGGTACTCCTCGAGCGGTGTTGGAGAATTACCAGCTCTCGGGTATAACTATCAAGTACTTAAAAGAATGTAGTGTGGACCAGCAATTGCAGTCGCTTTCTGTGCCCTTAGAAAACGACGTTGTGAATGGTACTCCTCTCATCAAAGATAAAGACATCAAACTCCACCACTCAATTCTCTCCGATGGGATTGAACTTGTTCGAGCAAAAACAGTTTGGACGCCAAAATTCAATTAA

mRNA sequence

ATGGCACTCATATGTTCATCAAATGGCTCCCATTTTGGTATGGAATTAGTATCAATTTCAACGAGGGAACCAACATTTGGACATGCCACCACACCCAGTTTGCACCTCAAAGGCCGACCCAAAAGTGCCTCTCTTACCCTCAAATCTTCTCACATTTCTCAACCCATTGCAGGTGGGTTCAAGAGGATCGACGATTACATGTCGAGAAAACCCGAGATAACTCGTGAGAATTTAATGGTGGAAGAGTTTTTGAACGATGGTTTGGTTTACCAATGTCATTTTTTGGTGAGATCATACGAGTCGGGACCTGATAATAAAATGACAATGTTTTTCGTCATCAACCAGTTACAGACGAGACTGAGCGATTTGGATATGAATCAGCACATTAACAATGCCAGTTATATCAACTTCGTTCTCGAGGGTACTCCTCGAGCGGTGTTGGAGAATTACCAGCTCTCGGGTATAACTATCAAGTACTTAAAAGAATGTAGTGTGGACCAGCAATTGCAGTCGCTTTCTGTGCCCTTAGAAAACGACGTTGTGAATGGTACTCCTCTCATCAAAGATAAAGACATCAAACTCCACCACTCAATTCTCTCCGATGGGATTGAACTTGTTCGAGCAAAAACAGTTTGGACGCCAAAATTCAATTAA

Coding sequence (CDS)

ATGGCACTCATATGTTCATCAAATGGCTCCCATTTTGGTATGGAATTAGTATCAATTTCAACGAGGGAACCAACATTTGGACATGCCACCACACCCAGTTTGCACCTCAAAGGCCGACCCAAAAGTGCCTCTCTTACCCTCAAATCTTCTCACATTTCTCAACCCATTGCAGGTGGGTTCAAGAGGATCGACGATTACATGTCGAGAAAACCCGAGATAACTCGTGAGAATTTAATGGTGGAAGAGTTTTTGAACGATGGTTTGGTTTACCAATGTCATTTTTTGGTGAGATCATACGAGTCGGGACCTGATAATAAAATGACAATGTTTTTCGTCATCAACCAGTTACAGACGAGACTGAGCGATTTGGATATGAATCAGCACATTAACAATGCCAGTTATATCAACTTCGTTCTCGAGGGTACTCCTCGAGCGGTGTTGGAGAATTACCAGCTCTCGGGTATAACTATCAAGTACTTAAAAGAATGTAGTGTGGACCAGCAATTGCAGTCGCTTTCTGTGCCCTTAGAAAACGACGTTGTGAATGGTACTCCTCTCATCAAAGATAAAGACATCAAACTCCACCACTCAATTCTCTCCGATGGGATTGAACTTGTTCGAGCAAAAACAGTTTGGACGCCAAAATTCAATTAA

Protein sequence

MALICSSNGSHFGMELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIAGGFKRIDDYMSRKPEITRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVPLENDVVNGTPLIKDKDIKLHHSILSDGIELVRAKTVWTPKFN

Homology

[Close]

BLAST of Carg23150 vs. NCBI nr
Match: XP_023514527.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 367.5 bits (942), Expect = 3.2e-98
Identity = 210/362 (58.01%), Postives = 213/362 (58.84%), Query Frame = 0


Query: 1   MALICSSNGSHFGMELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIAGGF 60
           MALICSSNGSHFGMELVSIS REPTFGHATTPSLHLK RPK+ASLTLKSSHISQPIAGGF
Sbjct: 1   MALICSSNGSHFGMELVSISMREPTFGHATTPSLHLKARPKTASLTLKSSHISQPIAGGF 60

Query: 61  KRIDDYMSRKPEITRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ--- 120
           K IDDY+SRKPEITRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ   
Sbjct: 61  KSIDDYVSRKPEITRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQESK 120

Query: 121 ------------------------------------------------------------ 180
                                                                       
Sbjct: 121 LNHFISCGLVERGLGKTGFGTTHEMTKRDLIWVVHKLQVVVDQFPSWNDVVELRTWICKH 180

Query: 181 ------------------------------------------------------------ 218
                                                                       
Sbjct: 181 GKNSYRRNWIARDKKSGKVLIRAICFYVLMNKRTRKLSKFCEELKEEMNPFFLDSHPILE 240

[Close]

BLAST of Carg23150 vs. NCBI nr
Match: XP_022960310.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita moschata])

HSP 1 Score: 340.1 bits (871), Expect = 5.5e-90
Identity = 196/349 (56.16%), Postives = 200/349 (57.31%), Query Frame = 0


Query: 14  MELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIAGGFKRIDDYMSRKPEI 73
           MELVSIS REPTFGHATTPSLHLKGRPKSASLTLKSSHISQP AGGF+ +DDYMSRKPEI
Sbjct: 1   MELVSISMREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPTAGGFESMDDYMSRKPEI 60

Query: 74  TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ---------------- 133
           TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ                
Sbjct: 61  TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQESKLNHFISCGLVERG 120

Query: 134 ------------------------------------------------------------ 193
                                                                       
Sbjct: 121 LGKTGFGTTHEMTKRDLIWVVHKLQVVVDQFPSWNDVVELRTWICKHGKNSYRRNWIARD 180

Query: 194 ------------------------------------------------------------ 218
                                                                       
Sbjct: 181 KKSGKVLIRAICFYVLMNRRTRKLSKFCEELKEEMNPFFLDSHPILEEDNIVSQKLHFHQ 240

[Close]

BLAST of Carg23150 vs. NCBI nr
Match: XP_023004418.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 332.4 bits (851), Expect = 1.1e-87
Identity = 194/348 (55.75%), Postives = 198/348 (56.90%), Query Frame = 0


Query: 14  MELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIAGGFKRIDDYMSRKPEI 73
           MELVSIS REPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIA GFK +DDY+SRKPEI
Sbjct: 1   MELVSISMREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIASGFKSMDDYVSRKPEI 60

Query: 74  TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ---------------- 133
           TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ                
Sbjct: 61  TRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQESKLNHFISCGLVXXX 120

Query: 134 ------------------------------------------------------------ 193
                                                                       
Sbjct: 121 XXXXXXXXXXEMTKRDLIWVVHKLQVVVDQFPSWNDVVELRTWICRHGKNSYRRNWIARD 180

Query: 194 ------------------------------------------------------------ 217
                                                                       
Sbjct: 181 KKSGKVLIRAICSYVLMNKRTRKLSKFCEELEEEMNPFFLDSHPILEEDNIVSQKLHLHQ 240

[Close]

BLAST of Carg23150 vs. NCBI nr
Match: XP_022156309.1 (palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Momordica charantia])

HSP 1 Score: 161.0 bits (406), Expect = 4.5e-36
Identity = 86/201 (42.79%), Postives = 122/201 (60.70%), Query Frame = 0


Query: 15  ELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHISQPIAGGFKRIDDYMSRKPEIT 74
           E++S S R   F HAT  +  + G           ++I++  A      D     K +IT
Sbjct: 14  EIISASKRIQMFQHATAKNNRMSG----------LTNIAKTTASALTNGDTPKPTKVDIT 73

Query: 75  RENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQTRLSDLDMNQHINNASY 134
            ++L +EE L+DG VY+  F  +SYE G DNK T+  + N+LQTRLSDLDMN+HINNA+Y
Sbjct: 74  LKDLTMEELLDDGRVYEHLFFFKSYELGLDNKATLVSITNKLQTRLSDLDMNKHINNAAY 133

Query: 135 INFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVPLENDVVNGTPLIKDKDIKL 194
           +NF++E  P+ +LE++ +SGIT+KYLKEC  D++LQ L  P   D +NG   I      L
Sbjct: 134 VNFIIETAPKWLLESHYVSGITLKYLKECGRDEELQCLCAP-SKDNINGNEDI----FHL 193

Query: 195 HHSILSDGIELVRAKTVWTPK 216
           HHS+    +EL R  T+W+PK
Sbjct: 194 HHSLRLQSLELTRGTTIWSPK 199

[Close]

BLAST of Carg23150 vs. NCBI nr
Match: XP_016902654.1 (PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucumis melo])

HSP 1 Score: 147.5 bits (371), Expect = 5.2e-32
Identity = 69/100 (69.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L TRLSDLDMN H+NNASYINF+LEGTPR +LE+++LS +T+KYLKEC VD+ LQSLS+P
Sbjct: 38  LVTRLSDLDMNHHVNNASYINFILEGTPRWMLESHRLSTVTVKYLKECGVDKILQSLSMP 97

Query: 176 LENDVV-NGTPLIKDKDIKLHHSILSDGIELVRAKTVWTP 215
           ++NDV+ NG  L+K+  IKLHHSI+S+GIELVRA T+W P
Sbjct: 98  IQNDVISNGNSLVKENYIKLHHSIVSEGIELVRATTLWIP 137

[Close]

BLAST of Carg23150 vs. TAIR10
Match: AT1G08510.1 (fatty acyl-ACP thioesterases B)

HSP 1 Score: 82.0 bits (201), Expect = 4.9e-16
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 108 TMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQ 167
           T  +V + L  R SDLD+NQH+NN  YI ++LE  P  ++E  +L  +T++Y +EC  D 
Sbjct: 297 TADYVRSGLTPRWSDLDVNQHVNNVKYIGWILESAPVGIMERQKLKSMTLEYRRECGRDS 356

Query: 168 QLQSLSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPK 216
            LQSL+     D+ N   L    D++  H + L DG E+VR +T W+ K
Sbjct: 357 VLQSLTAVTGCDIGN---LATAGDVECQHLLRLQDGAEVVRGRTEWSSK 402

[Close]

BLAST of Carg23150 vs. TAIR10
Match: AT3G25110.1 (fatA acyl-ACP thioesterase)

HSP 1 Score: 69.7 bits (169), Expect = 2.5e-12
Identity = 36/106 (33.96%), Postives = 55/106 (51.89%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L+ R +DLDMNQH+NN +YI +VLE  P+ +++ ++L  IT+ Y +EC  D  + SL+  
Sbjct: 254 LKPRRADLDMNQHVNNVTYIGWVLESIPQEIVDTHELQVITLDYRRECQQDDVVDSLTTT 313

Query: 176 ------LENDVVNGTPLIKDKDIKLHHSILSDGIELVRAKTVWTPK 216
                       +GT    D        +  DG E+ R  T+W  K
Sbjct: 314 TSEIGGTNGSATSGTQGHNDSQFLHLLRLSGDGQEINRGTTLWRKK 359

[Close]

BLAST of Carg23150 vs. TAIR10
Match: AT4G13050.1 (Acyl-ACP thioesterase)

HSP 1 Score: 68.2 bits (165), Expect = 7.3e-12
Identity = 38/112 (33.93%), Postives = 61/112 (54.46%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSV- 175
           L+ R +DLDMNQH+NN +YI +VLE  P+ +++ ++L  IT+ Y +EC  D  + SL+  
Sbjct: 253 LKPRRADLDMNQHVNNVTYIGWVLESIPQEIIDTHELKVITLDYRRECQQDDIVDSLTTS 312

Query: 176 PLENDVV------NGTPLIKDKDIKLHH-----SILSDGIELVRAKTVWTPK 216
              N+VV      NG+     ++    H      +  +G E+ R +T W  K
Sbjct: 313 ETPNEVVSKLTGTNGSTTSSKREHNESHFLHILRLSENGQEINRGRTQWRKK 364

[Close]

BLAST of Carg23150 vs. Swiss-Prot
Match: sp|Q9SQI3|FATB_GOSHI (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum OX=3635 GN=FATB1 PE=1 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.3e-15
Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 0


Query: 112 VINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQS 171
           V   L  + SDLD+NQH+NN  YI ++LE  P  +LE+++LS +T++Y +EC  D  LQS
Sbjct: 296 VCKGLTPKWSDLDVNQHVNNVKYIGWILESAPLPILESHELSALTLEYRRECGRDSVLQS 355

Query: 172 LSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPK 216
           L+   +++  N    +   +    H + L DG E+VR +T W PK
Sbjct: 356 LTTVSDSNTENA---VNVGEFNCQHLLRLDDGAEIVRGRTRWRPK 397

[Close]

BLAST of Carg23150 vs. Swiss-Prot
Match: sp|Q9SJE2|FATB_ARATH (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FATB PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.8e-15
Identity = 43/109 (39.45%), Postives = 64/109 (58.72%), Query Frame = 0


Query: 108 TMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQ 167
           T  +V + L  R SDLD+NQH+NN  YI ++LE  P  ++E  +L  +T++Y +EC  D 
Sbjct: 297 TADYVRSGLTPRWSDLDVNQHVNNVKYIGWILESAPVGIMERQKLKSMTLEYRRECGRDS 356

Query: 168 QLQSLSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPK 216
            LQSL+     D+ N   L    D++  H + L DG E+VR +T W+ K
Sbjct: 357 VLQSLTAVTGCDIGN---LATAGDVECQHLLRLQDGAEVVRGRTEWSSK 402

[Close]

BLAST of Carg23150 vs. Swiss-Prot
Match: sp|Q39473|FATB_CINCA (Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic OS=Cinnamomum camphora OX=13429 GN=FATB1 PE=1 SV=1)

HSP 1 Score: 79.0 bits (193), Expect = 7.4e-14
Identity = 41/112 (36.61%), Postives = 66/112 (58.93%), Query Frame = 0


Query: 105 NKMTMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECS 164
           N  T  ++   L  R +DLD+NQH+NN  Y++++LE  P ++ E++ +S  TI+Y +EC+
Sbjct: 262 NDSTADYIQGGLTPRWNDLDINQHVNNIKYVDWILETVPDSIFESHHISSFTIEYRRECT 321

Query: 165 VDQQLQSLSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPK 216
           +D  LQSL+      V  G+    +  +   H + L  G E++RAKT W PK
Sbjct: 322 MDSVLQSLTT-----VSGGS---SEAGLVCEHLLQLEGGSEVLRAKTEWRPK 365

[Close]

BLAST of Carg23150 vs. Swiss-Prot
Match: sp|Q39513|FATB_CUPHO (Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana OX=36775 GN=FATB1 PE=2 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 4.1e-12
Identity = 38/100 (38.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L  R +DLD+NQH+NN  YI ++LE TP  VLE  +L  +T++Y +EC  +  L+SL+  
Sbjct: 304 LTPRWNDLDVNQHVNNVKYIGWILESTPPEVLETQELCSLTLEYRRECGRESVLESLTAM 363

Query: 176 LENDVVNGTPLIKDKDIKLHHSILSDGIELVRAKTVWTPK 216
             +    G+          H   L DG E+V+ +T W PK
Sbjct: 364 DPSGGGYGSQF-------QHLLRLEDGGEIVKGRTEWRPK 396

[Close]

BLAST of Carg23150 vs. Swiss-Prot
Match: sp|Q42712|FATA_CORSA (Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum sativum OX=4047 GN=FATA PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.3e-12
Identity = 40/114 (35.09%), Postives = 60/114 (52.63%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L  R +DLDMNQH+NN +YI +VLE  P+ VL  ++L  IT+ Y +EC  D  + SL+ P
Sbjct: 252 LSPRRADLDMNQHVNNVAYIGWVLESIPKEVLYTHELETITLDYRRECQHDDVVDSLTSP 311

Query: 176 LENDVVNGTPLI------------KDKDIKLHH--SILSDGIELVRAKTVWTPK 216
             ++    T +I            +D  +K  H   +   G+E+ R +T W  K
Sbjct: 312 EVDEDTAVTKIIGTNGHAAAATEARDDSLKFLHFLRVSGQGLEINRGRTEWRKK 365

[Close]

BLAST of Carg23150 vs. TrEMBL
Match: tr|A0A1S4E345|A0A1S4E345_CUCME (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC107991799 PE=3 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 3.4e-32
Identity = 69/100 (69.00%), Postives = 87/100 (87.00%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L TRLSDLDMN H+NNASYINF+LEGTPR +LE+++LS +T+KYLKEC VD+ LQSLS+P
Sbjct: 38  LVTRLSDLDMNHHVNNASYINFILEGTPRWMLESHRLSTVTVKYLKECGVDKILQSLSMP 97

Query: 176 LENDVV-NGTPLIKDKDIKLHHSILSDGIELVRAKTVWTP 215
           ++NDV+ NG  L+K+  IKLHHSI+S+GIELVRA T+W P
Sbjct: 98  IQNDVISNGNSLVKENYIKLHHSIVSEGIELVRATTLWIP 137

[Close]

BLAST of Carg23150 vs. TrEMBL
Match: tr|A0A0A0KAB7|A0A0A0KAB7_CUCSA (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440560 PE=3 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.9e-31
Identity = 69/100 (69.00%), Postives = 85/100 (85.00%), Query Frame = 0


Query: 116 LQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQQLQSLSVP 175
           L TRLSDLDMN H+NNASYINF+LEGTP  VLE++ LS +TIKYLKEC V ++LQSLS+P
Sbjct: 38  LVTRLSDLDMNHHVNNASYINFILEGTPGWVLESHWLSALTIKYLKECGVGKKLQSLSMP 97

Query: 176 LENDVV-NGTPLIKDKDIKLHHSILSDGIELVRAKTVWTP 215
           ++ND V NG  L+++  IKLHHS+LS+GIELVRA T+WTP
Sbjct: 98  IQNDTVSNGNYLVRENFIKLHHSVLSEGIELVRATTLWTP 137

[Close]

BLAST of Carg23150 vs. TrEMBL
Match: tr|A0A0A0K767|A0A0A0K767_CUCSA (Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440570 PE=3 SV=1)

HSP 1 Score: 105.5 bits (262), Expect = 1.5e-19
Identity = 60/119 (50.42%), Postives = 74/119 (62.18%), Query Frame = 0


Query: 1   MALICSSNGSHFGMELVSISTREPTFGHATTPSLHLKGRPKSASLTLKSSHI--SQPIAG 60
           MA I SS   +FG E  S   +E  FG +   +L LK  PK     L++S+I     IA 
Sbjct: 1   MAAISSSYCCNFGEEFNSNLKKEQRFGDSNRGNLQLKNHPKFCLEGLRTSNIIAKSSIAS 60

Query: 61  GFKRIDDYMSRKPEITRENLMVEEFLNDGLVYQCHFLVRSYESGPDNKMTMFFVINQLQ 118
             ++I+ Y SR  +IT  NL + E LNDGLVYQ HFLV+SYESGPD  MTMFF+INQLQ
Sbjct: 61  EVRKINSYESRNLDITHGNLTMGELLNDGLVYQRHFLVKSYESGPDKNMTMFFIINQLQ 119

[Close]

BLAST of Carg23150 vs. TrEMBL
Match: tr|A0A2P4LLF9|A0A2P4LLF9_QUESU (Acyl-[acyl-carrier-protein] hydrolase OS=Quercus suber OX=58331 GN=CFP56_45969 PE=3 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 7.7e-16
Identity = 48/110 (43.64%), Postives = 68/110 (61.82%), Query Frame = 0


Query: 108 TMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQ 167
           T  +V   L  R SDLD+NQH+NN  YI ++LE  P  +LE+++L+ +T++Y +EC  D 
Sbjct: 303 TADYVRTGLAPRWSDLDVNQHVNNVKYIGWILESAPLKILESHELAAMTLEYRRECGRDS 362

Query: 168 QLQSLSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPKF 217
            LQSL+    N V N   L    DI+  H + L DG E+VR +TVW PK+
Sbjct: 363 VLQSLTAVSSNGVGN---LASLADIECQHLLRLEDGAEIVRGRTVWRPKY 409

[Close]

BLAST of Carg23150 vs. TrEMBL
Match: tr|A0A2N9H9D0|A0A2N9H9D0_FAGSY (Acyl-[acyl-carrier-protein] hydrolase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26914 PE=3 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.0e-15
Identity = 47/110 (42.73%), Postives = 69/110 (62.73%), Query Frame = 0


Query: 108 TMFFVINQLQTRLSDLDMNQHINNASYINFVLEGTPRAVLENYQLSGITIKYLKECSVDQ 167
           T  +V   L  R SDLD+NQH+NN  YI ++LE  P  +LE+++L+ +T++Y +EC  D 
Sbjct: 295 TADYVRTGLCPRWSDLDVNQHVNNVKYIGWILESAPLPILESHELAAMTLEYRRECGKDS 354

Query: 168 QLQSLSVPLENDVVNGTPLIKDKDIKLHHSI-LSDGIELVRAKTVWTPKF 217
            LQSL+    + V N   L+   DI+  H + L DG E+VR +TVW PK+
Sbjct: 355 VLQSLTAVSSDGVGN---LVNMADIECQHLLRLEDGAEIVRGRTVWRPKY 401

The following BLAST results are available for this feature:

BLAST of Carg23150 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023514527.1	3.2e-98	58.01	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita pepo ...	[more]
XP_022960310.1	5.5e-90	56.16	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita mosch...	[more]
XP_023004418.1	1.1e-87	55.75	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucurbita maxim...	[more]
XP_022156309.1	4.5e-36	42.79	palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Momordica chara...	[more]
XP_016902654.1	5.2e-32	69.00	PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Cucu...	[more]

BLAST of Carg23150 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G08510.1	4.9e-16	39.45	fatty acyl-ACP thioesterases B	[more]
AT3G25110.1	2.5e-12	33.96	fatA acyl-ACP thioesterase	[more]
AT4G13050.1	7.3e-12	33.93	Acyl-ACP thioesterase	[more]

BLAST of Carg23150 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SQI3\|FATB_GOSHI	2.3e-15	39.05	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Gossypium hirsutum...	[more]
sp\|Q9SJE2\|FATB_ARATH	8.8e-15	39.45	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Arabidopsis thalia...	[more]
sp\|Q39473\|FATB_CINCA	7.4e-14	36.61	Dodecanoyl-[acyl-carrier-protein] hydrolase, chloroplastic OS=Cinnamomum camphor...	[more]
sp\|Q39513\|FATB_CUPHO	4.1e-12	38.00	Palmitoyl-acyl carrier protein thioesterase, chloroplastic OS=Cuphea hookeriana ...	[more]
sp\|Q42712\|FATA_CORSA	5.3e-12	35.09	Oleoyl-acyl carrier protein thioesterase, chloroplastic (Fragment) OS=Coriandrum...	[more]

BLAST of Carg23150 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S4E345\|A0A1S4E345_CUCME	3.4e-32	69.00	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis melo OX=3656 GN=LOC107991799 PE...	[more]
tr\|A0A0A0KAB7\|A0A0A0KAB7_CUCSA	2.9e-31	69.00	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440560...	[more]
tr\|A0A0A0K767\|A0A0A0K767_CUCSA	1.5e-19	50.42	Acyl-[acyl-carrier-protein] hydrolase OS=Cucumis sativus OX=3659 GN=Csa_7G440570...	[more]
tr\|A0A2P4LLF9\|A0A2P4LLF9_QUESU	7.7e-16	43.64	Acyl-[acyl-carrier-protein] hydrolase OS=Quercus suber OX=58331 GN=CFP56_45969 P...	[more]
tr\|A0A2N9H9D0\|A0A2N9H9D0_FAGSY	1.0e-15	42.73	Acyl-[acyl-carrier-protein] hydrolase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0016790	thiolester hydrolase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0006633	fatty acid biosynthetic process

Vocabulary: **INTERPRO**
Term	Definition
IPR029069	HotDog_dom_sf
IPR002864	Acyl-ACP_thioesterase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006633	fatty acid biosynthetic process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0016790	thiolester hydrolase activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23150-RA	Carg23150-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002864	Acyl-ACP thioesterase	PFAM	PF01643	Acyl-ACP_TE	coord: 113..213 e-value: 4.0E-22 score: 78.7
None	No IPR available	GENE3D	G3DSA:3.10.129.10		coord: 110..217 e-value: 2.0E-26 score: 94.7
None	No IPR available	PANTHER	PTHR31727	FAMILY NOT NAMED	coord: 114..215 coord: 65..117
IPR029069	HotDog domain superfamily	SUPERFAMILY	SSF54637	Thioesterase/thiol ester dehydrase-isomerase	coord: 116..212

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23150	Cla015415	Watermelon (97103) v1	carwmB0138
Carg23150	Csa7G440560	Cucumber (Chinese Long) v2	carcuB0161
Carg23150	ClCG09G002340	Watermelon (Charleston Gray)	carwcgB0139
Carg23150	CSPI07G21100	Wild cucumber (PI 183967)	carcpiB0167
Carg23150	CmaCh08G006280	Cucurbita maxima (Rimu)	carcmaB0193
Carg23150	CmoCh08G006130	Cucurbita moschata (Rifu)	carcmoB0199
Carg23150	Lsi02G027620	Bottle gourd (USVL1VR-Ls)	carlsiB131
Carg23150	Cp4.1LG17g08850	Cucurbita pepo (Zucchini)	carcpeB0210
Carg23150	CsGy7G019390	Cucumber (Gy14) v2	carcgybB0159
Carg23150	CsaV3_7G032970	Cucumber (Chinese Long) v3	carcucB0168
Carg23150	Cla97C09G164490	Watermelon (97103) v2	carwmbB0151
Carg23150	Bhi09G000082	Wax gourd	carwgoB0184

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23150	Wild cucumber (PI 183967)	carcpiB0166
Carg23150	Cucumber (Chinese Long) v2	carcuB0160
Carg23150	Cucumber (Chinese Long) v3	carcucB0167
Carg23150	Bottle gourd (USVL1VR-Ls)	carlsiB130
Carg23150	Melon (DHL92) v3.5.1	carmeB0148
Carg23150	Melon (DHL92) v3.5.1	carmeB0149
Carg23150	Melon (DHL92) v3.6.1	carmedB0152
Carg23150	Melon (DHL92) v3.6.1	carmedB0151
Carg23150	Watermelon (Charleston Gray)	carwcgB0140
Carg23150	Watermelon (97103) v1	carwmB0139
Carg23150	Watermelon (97103) v2	carwmbB0152
Carg23150	Wax gourd	carwgoB0183
Carg23150	Silver-seed gourd	carcarB169
Carg23150	Silver-seed gourd	carcarB170
Carg23150	Cucumber (Gy14) v2	carcgybB0158
Carg23150	Cucumber (Gy14) v1	carcgyB0178
Carg23150	Cucurbita maxima (Rimu)	carcmaB0191
Carg23150	Cucurbita maxima (Rimu)	carcmaB0192
Carg23150	Cucurbita moschata (Rifu)	carcmoB0197
Carg23150	Cucurbita moschata (Rifu)	carcmoB0198
Carg23150	Cucurbita pepo (Zucchini)	carcpeB0208
Carg23150	Cucurbita pepo (Zucchini)	carcpeB0209