Carg23088 (gene) Silver-seed gourd

Overview
NameCarg23088
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPentatricopeptide repeat
LocationCucurbita_argyrosperma_scaffold_215 : 102129 .. 104273 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAAACGTTGGCGCCAAATTACCAACTTTCAAAATTTTGCTATTGTCATTCCAATTCTCCCTCTCTGTTCAACGCATTGGCTGTTCTTTGATTTCCTCGAGTTCTTATATTTGTTTGTTTGGAACCAAAAGGTTCTCTGTTTCGACCACTCCCTCTTACAACTATTGGCTTTCTCTTCATCTAAGAAACGGAAGAATCAATGAAGCCCGATCATTATTTGATCACATATCTTCTCCTGGTGTTAACTTATACACAATGATGATTGCGGGTTATGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGGTTTCTTGGAATTCTATGCTCAAAGGGTGTCTCAAATGTGGGGATTTAAGTATGGCCTGGAACGTGTTTGACAAAATGCCGCAAAGGAACGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCAGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCTTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATTCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACAACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGGTATGATGAGAATGTGTGTGCTTCCTAATCAATCTTCTCTGACTAGTGCTCTAAATTCATGTTGTGGATTAGAGGCTGTTGATAGAGGCAGGGAAGTTCATAGTGTAGCTTACAAGCTAGGCTTAGAAAATGATATCTTTGTCGGTAATTCTCTAGTGGTTATGTATACTAAATGTGGACAAATTCGTGATGGGGTTGCTGCCTTCACAAGAATGTCTAGAAAGAATGCTGTGTCCTGGAACTCCATCATCGTTGGATGTGCACAACATGGTTTTGGGATGTGGGCTTTGACTCTCTTCGCTCAAATGATTCGTTCAAGGGTGGATCCAGACGAGATTACGCTCATAGGATTACTTTCAGCTTGCAGCCATTCTGGATTGTTAACAAAGGGTAGAAGCTTTTTCAAGCATTTTGGCAAAAACTTGTGTATTGAGATGACAAATGAGCACTATGCTTCTATGGTTGATCTATTAGGCCGATATGGAGAATTGGACGAAGCCGAAGCGCTGATTCATACCATGCCTATCAAAGCTAACTACACGGTGTGGCTTGCACTGCTTAGCAGTTGCTCCAAACACTCTAATTTGGATGTAGCTGAAAGGGCAGCAAAATGTGTGTTGGAACTACGGCCAAGCTGTAGTGCTGCTTATACATTACTCTCCAATCTATACGCTTCTAGTGGAAAATGGACTGAAGTTTCAAAAATAAGGAAGAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGTTGGATTACAGTTAAGGGGATCAGGCACGATTTTCTTTCGGGAGATCGGTCGCATCCATCGAGCCGAAAAATATACCAAAAACTAGAATGGCTAAGAGGGAAGTTGAAGGAATTGGGTTATGTACCTGATCCGAAGTTCTCCTTGCATGATGTTGAGTCAGAACAAAAGGAAGAGATGCTGTCAAGTCATAGTGAGAGGCTTGCTATTGGGTTTGGATTAATCAGTACCGTTGAAGGTAGCACCATAACAGTAATGAAAAATCTCCGCATTTGTGGCGATTGTCACAATGCGATCAAGCTTATAGCGAAAGTCGTCGGTCGGGAAATCGTCGTTAGAGACTCTAGCCGCTTTCATCACTTTCGTAGCGGAGCCTGTTCTTGTGGAGATTACTGGTAG

mRNA sequence

ATGCGAAACGTTGGCGCCAAATTACCAACTTTCAAAATTTTGCTATTGTCATTCCAATTCTCCCTCTCTGTTCAACGCATTGGCTGTTCTTTGATTTCCTCGAGTTCTTATATTTGTTTGTTTGGAACCAAAAGGTTCTCTGTTTCGACCACTCCCTCTTACAACTATTGGCTTTCTCTTCATCTAAGAAACGGAAGAATCAATGAAGCCCGATCATTATTTGATCACATATCTTCTCCTGGTGTTAACTTATACACAATGATGATTGCGGGTTATGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGGTTTCTTGGAATTCTATGCTCAAAGGGTGTCTCAAATGTGGGGATTTAAGTATGGCCTGGAACGTGTTTGACAAAATGCCGCAAAGGAACGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCAGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCTTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATTCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACAACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGGTATGATGAGAATGTGTGTGCTTCCTAATCAATCTTCTCTGACTAGTGCTCTAAATTCATGTTGTGGATTAGAGGCTGTTGATAGAGGCAGGGAAGTTCATAGTGTAGCTTACAAGCTAGGCTTAGAAAATGATATCTTTGTCGGTAATTCTCTAGTGGTTATGTATACTAAATGTGGACAAATTCGTGATGGGGTTGCTGCCTTCACAAGAATGTCTAGAAAGAATGCTGTGTCCTGGAACTCCATCATCGTTGGATGTGCACAACATGGTTTTGGGATGTGGGCTTTGACTCTCTTCGCTCAAATGATTCGTTCAAGGGTGGATCCAGACGAGATTACGCTCATAGGATTACTTTCAGCTTGCAGCCATTCTGGATTGTTAACAAAGGGTAGAAGCTTTTTCAAGCATTTTGGCAAAAACTTGTGTATTGAGATGACAAATGAGCACTATGCTTCTATGGTTGATCTATTAGGCCGATATGGAGAATTGGACGAAGCCGAAGCGCTGATTCATACCATGCCTATCAAAGCTAACTACACGGTGTGGCTTGCACTGCTTAGCAGTTGCTCCAAACACTCTAATTTGGATGTAGCTGAAAGGGCAGCAAAATGTGTGTTGGAACTACGGCCAAGCTGTAGTGCTGCTTATACATTACTCTCCAATCTATACGCTTCTAGTGGAAAATGGACTGAAGTTTCAAAAATAAGGAAGAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGTTGGATTACAGTTAAGGGGATCAGGCACGATTTTCTTTCGGGAGATCGGTCGCATCCATCGAGCCGAAAAATATACCAAAAACTAGAATGGCTAAGAGGGAAGTTGAAGGAATTGGGTTATGTACCTGATCCGAAGTTCTCCTTGCATGATGTTGAGTCAGAACAAAAGGAAGAGATGCTGTCAAGTCATAGTGAGAGGCTTGCTATTGGGTTTGGATTAATCAGTACCGTTGAAGGTAGCACCATAACAGTAATGAAAAATCTCCGCATTTGTGGCGATTGTCACAATGCGATCAAGCTTATAGCGAAAGTCGTCGGTCGGGAAATCGTCGTTAGAGACTCTAGCCGCTTTCATCACTTTCGTAGCGGAGCCTGTTCTTGTGGAGATTACTGGTAG

Coding sequence (CDS)

ATGCGAAACGTTGGCGCCAAATTACCAACTTTCAAAATTTTGCTATTGTCATTCCAATTCTCCCTCTCTGTTCAACGCATTGGCTGTTCTTTGATTTCCTCGAGTTCTTATATTTGTTTGTTTGGAACCAAAAGGTTCTCTGTTTCGACCACTCCCTCTTACAACTATTGGCTTTCTCTTCATCTAAGAAACGGAAGAATCAATGAAGCCCGATCATTATTTGATCACATATCTTCTCCTGGTGTTAACTTATACACAATGATGATTGCGGGTTATGCAGAAAAAGGTAGGCTTGAGGATGCCCTGAAACTGTTCTATGAAATGCCTGTGAAGGATCTGGTTTCTTGGAATTCTATGCTCAAAGGGTGTCTCAAATGTGGGGATTTAAGTATGGCCTGGAACGTGTTTGACAAAATGCCGCAAAGGAACGTCATTTCTTGGACGACCATAATCGATGGGCTGCTGGAGTTTGGGAGAGTTGAGGTTGCTGAGCGCTTTTTCTGGGAGATGCCCACTAGGGATGTTGCTGCCTGGAATTCCATGGTTCATGGATATTTTAGTAATGGTAGAGTTGAAGATGCCGTTGAGTTGTTTGAGAAAATGCCTTTCCGGAATGTGATTTCGTGGACTTCAGTGATTGGTGGGCTTGACCAGAATGGAAGGAGTTACGAAGCTCTACTTGTTTTCCAGAAAATGTTGGCTTCCTTTATCAAACCCACTTCGAGCACGTTGGCTTGTGCATTGACAGCTTGTGCAAACATACGTACTTTCTTCATAGGTGTACAGATTCATGGTCTAATTGTTAAGACTGGTCACTGCTTTGATGAATACATAGCTGCTTCCCTTATAACATTTTATTCAAACTGCAAGCTAATACAGAATGCTTTCGACATTTTTAACAACGATTTACGGAGAAATGTTGCGGTTTGGACGGCTCTTCTAACGGGATATGGATTGAACTGTAAGCACGACGATGCGTTACGGGTTTTCAAGGGTATGATGAGAATGTGTGTGCTTCCTAATCAATCTTCTCTGACTAGTGCTCTAAATTCATGTTGTGGATTAGAGGCTGTTGATAGAGGCAGGGAAGTTCATAGTGTAGCTTACAAGCTAGGCTTAGAAAATGATATCTTTGTCGGTAATTCTCTAGTGGTTATGTATACTAAATGTGGACAAATTCGTGATGGGGTTGCTGCCTTCACAAGAATGTCTAGAAAGAATGCTGTGTCCTGGAACTCCATCATCGTTGGATGTGCACAACATGGTTTTGGGATGTGGGCTTTGACTCTCTTCGCTCAAATGATTCGTTCAAGGGTGGATCCAGACGAGATTACGCTCATAGGATTACTTTCAGCTTGCAGCCATTCTGGATTGTTAACAAAGGGTAGAAGCTTTTTCAAGCATTTTGGCAAAAACTTGTGTATTGAGATGACAAATGAGCACTATGCTTCTATGGTTGATCTATTAGGCCGATATGGAGAATTGGACGAAGCCGAAGCGCTGATTCATACCATGCCTATCAAAGCTAACTACACGGTGTGGCTTGCACTGCTTAGCAGTTGCTCCAAACACTCTAATTTGGATGTAGCTGAAAGGGCAGCAAAATGTGTGTTGGAACTACGGCCAAGCTGTAGTGCTGCTTATACATTACTCTCCAATCTATACGCTTCTAGTGGAAAATGGACTGAAGTTTCAAAAATAAGGAAGAAGATGAAAGATGAAGGGATTTTAAAGCAACCTGGAAGTAGTTGGATTACAGTTAAGGGGATCAGGCACGATTTTCTTTCGGGAGATCGGTCGCATCCATCGAGCCGAAAAATATACCAAAAACTAGAATGGCTAAGAGGGAAGTTGAAGGAATTGGGTTATGTACCTGATCCGAAGTTCTCCTTGCATGATGTTGAGTCAGAACAAAAGGAAGAGATGCTGTCAAGTCATAGTGAGAGGCTTGCTATTGGGTTTGGATTAATCAGTACCGTTGAAGGTAGCACCATAACAGTAATGAAAAATCTCCGCATTTGTGGCGATTGTCACAATGCGATCAAGCTTATAGCGAAAGTCGTCGGTCGGGAAATCGTCGTTAGAGACTCTAGCCGCTTTCATCACTTTCGTAGCGGAGCCTGTTCTTGTGGAGATTACTGGTAG

Protein sequence

MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSLHLRNGRINEARSLFDHISSPGVNLYTMMIAGYAEKGRLEDALKLFYEMPVKDLVSWNSMLKGCLKCGDLSMAWNVFDKMPQRNVISWTTIIDGLLEFGRVEVAERFFWEMPTRDVAAWNSMVHGYFSNGRVEDAVELFEKMPFRNVISWTSVIGGLDQNGRSYEALLVFQKMLASFIKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW
Homology
[Close]
BLAST of Carg23088 vs. NCBI nr
Match: XP_023518895.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1079.3 bits (2790), Expect = 0.0e+00
Identity = 705/714 (98.74%), Postives = 710/714 (99.44%), Query Frame = 0 

Query: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60
           MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL
Sbjct: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60

Query: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240

Query: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFN 300
           SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFY+NCKLIQNAFDIFN
Sbjct: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN 300

Query: 301 NDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360
           +DLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR
Sbjct: 301 DDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360

Query: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQ 420
           GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGV  FT MSRKN VSWNSIIVGCAQ
Sbjct: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVVVFTGMSRKNVVSWNSIIVGCAQ 420

Query: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480
           HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE
Sbjct: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480

Query: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLEL 540
           HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSN+DVAERAAKCVLEL
Sbjct: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNVDVAERAAKCVLEL 540

Query: 541 RPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600
           +PSCSAAYTLLSNLYAS+GKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS
Sbjct: 541 QPSCSAAYTLLSNLYASNGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600

Query: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660
           HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV
Sbjct: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660

Query: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW
Sbjct: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 714

[Close]
BLAST of Carg23088 vs. NCBI nr
Match: XP_022926451.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 [Cucurbita moschata])

HSP 1 Score: 1072.8 bits (2773), Expect = 4.3e-310
Identity = 702/714 (98.32%), Postives = 709/714 (99.30%), Query Frame = 0 

Query: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60
           MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL
Sbjct: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60

Query: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HLRNGRINEARSLFDHISSPGVNL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLRNGRINEARSLFDHISSPGVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240

Query: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFN 300
           SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFY+NCKLIQNAFDIFN
Sbjct: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN 300

Query: 301 NDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360
           +DLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR
Sbjct: 301 DDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360

Query: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQ 420
           GREVHSVAYKLG+ENDIFVGNSLV MYTKCGQIRDGVA FTRMSRKN VSWNSIIVGCAQ
Sbjct: 361 GREVHSVAYKLGVENDIFVGNSLVAMYTKCGQIRDGVAVFTRMSRKNVVSWNSIIVGCAQ 420

Query: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480
           HGFGMWALTLFAQMIRSRVD DEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE
Sbjct: 421 HGFGMWALTLFAQMIRSRVDQDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480

Query: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLEL 540
           HYASMVDLLGR+GELDEAEALIHTMPIKANYTVWLALLSSCSKHSN+DVAERAAKCVLEL
Sbjct: 481 HYASMVDLLGRHGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNVDVAERAAKCVLEL 540

Query: 541 RPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600
           +PSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS
Sbjct: 541 QPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600

Query: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660
           HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLS+HSERLAIGFGLISTV
Sbjct: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSTHSERLAIGFGLISTV 660

Query: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW
Sbjct: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 714

[Close]
BLAST of Carg23088 vs. NCBI nr
Match: XP_023518896.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isoform X2 [Cucurbita pepo subsp. pepo] >XP_023518897.1 pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1005.4 bits (2598), Expect = 1.0e-289
Identity = 677/714 (94.82%), Postives = 682/714 (95.52%), Query Frame = 0 

Query: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60
           MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL
Sbjct: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60

Query: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240

Query: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFN 300
           SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFY+NCKLIQNAFDIFN
Sbjct: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN 300

Query: 301 NDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360
           +DLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR
Sbjct: 301 DDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360

Query: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQ 420
           GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGV  FT MSRKN VSWNSIIVGCAQ
Sbjct: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVVVFTGMSRKNVVSWNSIIVGCAQ 420

Query: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480
           HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTK                   
Sbjct: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTK------------------- 480

Query: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLEL 540
                    GRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSN+DVAERAAKCVLEL
Sbjct: 481 ---------GRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNVDVAERAAKCVLEL 540

Query: 541 RPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600
           +PSCSAAYTLLSNLYAS+GKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS
Sbjct: 541 QPSCSAAYTLLSNLYASNGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600

Query: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660
           HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV
Sbjct: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660

Query: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW
Sbjct: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 686

[Close]
BLAST of Carg23088 vs. NCBI nr
Match: XP_022926452.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 [Cucurbita moschata])

HSP 1 Score: 998.8 bits (2581), Expect = 9.3e-288
Identity = 674/714 (94.40%), Postives = 681/714 (95.38%), Query Frame = 0 

Query: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60
           MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL
Sbjct: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60

Query: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HLRNGRINEARSLFDHISSPGVNL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLRNGRINEARSLFDHISSPGVNLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240

Query: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFN 300
           SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFY+NCKLIQNAFDIFN
Sbjct: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN 300

Query: 301 NDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360
           +DLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR
Sbjct: 301 DDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360

Query: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQ 420
           GREVHSVAYKLG+ENDIFVGNSLV MYTKCGQIRDGVA FTRMSRKN VSWNSIIVGCAQ
Sbjct: 361 GREVHSVAYKLGVENDIFVGNSLVAMYTKCGQIRDGVAVFTRMSRKNVVSWNSIIVGCAQ 420

Query: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480
           HGFGMWALTLFAQMIRSRVD DEITLIGLLSACSHSGLLTK                   
Sbjct: 421 HGFGMWALTLFAQMIRSRVDQDEITLIGLLSACSHSGLLTK------------------- 480

Query: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLEL 540
                    GR+GELDEAEALIHTMPIKANYTVWLALLSSCSKHSN+DVAERAAKCVLEL
Sbjct: 481 ---------GRHGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNVDVAERAAKCVLEL 540

Query: 541 RPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600
           +PSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS
Sbjct: 541 QPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600

Query: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660
           HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLS+HSERLAIGFGLISTV
Sbjct: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSTHSERLAIGFGLISTV 660

Query: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW
Sbjct: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 686

[Close]
BLAST of Carg23088 vs. NCBI nr
Match: XP_023004051.1 (pentatricopeptide repeat-containing protein At5g46460, mitochondrial [Cucurbita maxima])

HSP 1 Score: 992.3 bits (2564), Expect = 8.7e-286
Identity = 669/714 (93.70%), Postives = 676/714 (94.68%), Query Frame = 0 

Query: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60
           MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL
Sbjct: 1   MRNVGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSL 60

Query: 61  HLRNGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120
           HLRNGRINEARS FD ISSPGVNLY XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 61  HLRNGRINEARSFFDDISSPGVNLYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 120

Query: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPT 240

Query: 241 SSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFN 300
           SSTLACALTACANIRTF IGVQIHGLIVKTGHCFDEYIAASLITFY+NCKLIQNAFDIFN
Sbjct: 241 SSTLACALTACANIRTFVIGVQIHGLIVKTGHCFDEYIAASLITFYANCKLIQNAFDIFN 300

Query: 301 NDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360
            DLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR
Sbjct: 301 EDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDR 360

Query: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQ 420
           GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVA FTRMSRKN VSWNSIIVGCAQ
Sbjct: 361 GREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAVFTRMSRKNVVSWNSIIVGCAQ 420

Query: 421 HGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNE 480
           HGFGMWALTLFAQMIRSR DPDEITLIGLLSACSHSGLLTK                   
Sbjct: 421 HGFGMWALTLFAQMIRSRGDPDEITLIGLLSACSHSGLLTK------------------- 480

Query: 481 HYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLEL 540
                    GRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSN+DV ERAAKCVLEL
Sbjct: 481 ---------GRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNVDVGERAAKCVLEL 540

Query: 541 RPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRS 600
           +PSCSAAYTLLSNLYAS+GKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDR 
Sbjct: 541 QPSCSAAYTLLSNLYASNGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRL 600

Query: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTV 660
           HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLS+HSERLAIGFGLISTV
Sbjct: 601 HPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSTHSERLAIGFGLISTV 660

Query: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           EGSTITVMKNLRICGDCHNAIKLIAKVVGREIV+RDSSRFHHFR+GACSCGDYW
Sbjct: 661 EGSTITVMKNLRICGDCHNAIKLIAKVVGREIVIRDSSRFHHFRNGACSCGDYW 686

[Close]
BLAST of Carg23088 vs. TAIR10
Match: AT5G46460.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 596.3 bits (1536), Expect = 2.5e-170
Identity = 284/479 (59.29%), Postives = 354/479 (73.90%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           IK TS    C +TACAN   F +G+Q+HGLI+K G  ++EY++ASLITFY+NCK I ++ 
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
            +F+  +   VAVWTALL+GY LN KH+DAL +F GM+R  +LPNQS+  S LNSC  L 
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
            +D G+E+H VA KLGLE D FVGNSLVVMY+  G + D V+ F ++ +K+ VSWNSIIV
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNL-CI 476
           GCAQHG G WA  +F QMIR   +PDEIT  GLLSACSH G L KGR  F +    +  I
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460

Query: 477 EMTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAK 536
           +   +HY  MVD+LGR G+L EAE LI  M +K N  VWLALLS+C  HS++D  E+AA 
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520

Query: 537 CVLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFL 596
            +  L    SAAY LLSN+YAS+G+W+ VSK+R KMK  GI+K+PGSSW+ ++G +H+F 
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580

Query: 597 SGDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFG 656
           SGD+ H S  +IY+KLE+LR KLKELGY PD + +LHDVE EQKEEML  HSERLAI FG
Sbjct: 581 SGDQPHCS--RIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFG 640

Query: 657 LISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           LI+TVEGS +TVMKNLR+C DCH  IKLI+ VVGREIV+RD  RFHHF++G CSCGDYW
Sbjct: 641 LINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697

[Close]
BLAST of Carg23088 vs. TAIR10
Match: AT3G23330.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)

HSP 1 Score: 406.0 bits (1042), Expect = 4.8e-113
Identity = 198/478 (41.42%), Postives = 301/478 (62.97%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           +KP S TL+  L   +       G +IHG +++ G   D YI +SL+  Y+    I+++ 
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
            +F+    R+   W +L+ GY  N ++++ALR+F+ M+   V P   + +S + +C  L 
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
            +  G+++H    + G  ++IF+ ++LV MY+KCG I+     F RM+  + VSW +II+
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIE 476
           G A HG G  A++LF +M R  V P+++  + +L+ACSH GL+ +   +F    K   + 
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477

Query: 477 MTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKC 536
              EHYA++ DLLGR G+L+EA   I  M ++   +VW  LLSSCS H NL++AE+ A+ 
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537

Query: 537 VLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLS 596
           +  +      AY L+ N+YAS+G+W E++K+R +M+ +G+ K+P  SWI +K   H F+S
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597

Query: 597 GDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGL 656
           GDRSHPS  KI + L+ +  ++++ GYV D    LHDV+ E K E+L  HSERLA+ FG+
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 657

Query: 657 ISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           I+T  G+TI V KN+RIC DCH AIK I+K+  REI+VRD+SRFHHF  G CSCGDYW
Sbjct: 658 INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]
BLAST of Carg23088 vs. TAIR10
Match: AT1G68930.1 (pentatricopeptide (PPR) repeat-containing protein)

HSP 1 Score: 396.0 bits (1016), Expect = 5.0e-110
Identity = 194/467 (41.54%), Postives = 282/467 (60.39%), Query Frame = 0 

Query: 248 LTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDLRRNV 307
           L AC  +     G QIH  I++T      Y+ ++LI  Y  CK +  A  +F+   ++NV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336

Query: 308 AVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGREVHSV 367
             WTA++ GYG   + ++A+++F  M R  + P+  +L  A+++C  + +++ G + H  
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396

Query: 368 AYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGFGMWA 427
           A   GL + + V NSLV +Y KCG I D    F  M+ ++AVSW +++   AQ G  +  
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456

Query: 428 LTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYASMVD 487
           + LF +M++  + PD +TL G++SACS +GL+ KG+ +FK       I  +  HY+ M+D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516

Query: 488 LLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPSCSAA 547
           L  R G L+EA   I+ MP   +   W  LLS+C    NL++ + AA+ ++EL P   A 
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576

Query: 548 YTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPSSRKI 607
           YTLLS++YAS GKW  V+++R+ M+++ + K+PG SWI  KG  H F + D S P   +I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636

Query: 608 YQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGSTITV 667
           Y KLE L  K+ + GY PD  F  HDVE   K +ML+ HSERLAI FGLI    G  I V
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696

Query: 668 MKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
            KNLR+C DCHNA K I+ V GREI+VRD+ RFH F+ G CSCGD+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743

[Close]
BLAST of Carg23088 vs. TAIR10
Match: AT3G49710.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 394.0 bits (1011), Expect = 1.9e-109
Identity = 198/480 (41.25%), Postives = 298/480 (62.08%), Query Frame = 0 

Query: 243 TLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFD---IF 302
           TLA  L A  ++     G Q HG ++K G   + ++ + LI FYS C      +D   +F
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301

Query: 303 NNDLRRNVAVWTALLTGYGLNCK-HDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAV 362
              L  ++ VW  +++GY +N +  ++A++ F+ M R+   P+  S     ++C  L + 
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361

Query: 363 DRGREVHSVAYKLGL-ENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVG 422
            + +++H +A K  +  N I V N+L+ +Y K G ++D    F RM   NAVS+N +I G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421

Query: 423 CAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEM 482
            AQHG G  AL L+ +M+ S + P++IT + +LSAC+H G + +G+ +F    +   IE 
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481

Query: 483 TNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCV 542
             EHY+ M+DLLGR G+L+EAE  I  MP K     W ALL +C KH N+ +AERAA  +
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541

Query: 543 LELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSG 602
           + ++P  +  Y +L+N+YA + KW E++ +RK M+ + I K+PG SWI VK  +H F++ 
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601

Query: 603 DRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSL--HDVESEQKEEM-LSSHSERLAIGF 662
           D SHP  R++ + LE +  K+K++GYV D K+++   D   E  EEM L  HSE+LA+ F
Sbjct: 602 DWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAF 661

Query: 663 GLISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           GL+ST +G  + V+KNLRICGDCHNAIK ++ V GREI+VRD+ RFH F+ G CSCGDYW
Sbjct: 662 GLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721

[Close]
BLAST of Carg23088 vs. TAIR10
Match: AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 394.0 bits (1011), Expect = 1.9e-109
Identity = 202/471 (42.89%), Postives = 284/471 (60.30%), Query Frame = 0 

Query: 244  LACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDL 303
            L  A++ACA ++    G QIH     +G   D     +L+T YS C  I+ ++  F    
Sbjct: 594  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653

Query: 304  RRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGRE 363
              +   W AL++G+  +  +++ALRVF  M R  +  N  +  SA+ +      + +G++
Sbjct: 654  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713

Query: 364  VHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGF 423
            VH+V  K G +++  V N+L+ MY KCG I D    F  +S KN VSWN+II   ++HGF
Sbjct: 714  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773

Query: 424  GMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYA 483
            G  AL  F QMI S V P+ +TL+G+LSACSH GL+ KG ++F+       +    EHY 
Sbjct: 774  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833

Query: 484  SMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPS 543
             +VD+L R G L  A+  I  MPIK +  VW  LLS+C  H N+++ E AA  +LEL P 
Sbjct: 834  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893

Query: 544  CSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPS 603
             SA Y LLSNLYA S KW      R+KMK++G+ K+PG SWI VK   H F  GD++HP 
Sbjct: 894  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953

Query: 604  SRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGS 663
            + +I++  + L  +  E+GYV D    L++++ EQK+ ++  HSE+LAI FGL+S     
Sbjct: 954  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013

Query: 664  TITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
             I VMKNLR+C DCH  IK ++KV  REI+VRD+ RFHHF  GACSC DYW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]
BLAST of Carg23088 vs. Swiss-Prot
Match: sp|Q9FHF9|PP419_ARATH (Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PCMP-H49 PE=2 SV=1)

HSP 1 Score: 596.3 bits (1536), Expect = 4.6e-169
Identity = 284/479 (59.29%), Postives = 354/479 (73.90%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           IK TS    C +TACAN   F +G+Q+HGLI+K G  ++EY++ASLITFY+NCK I ++ 
Sbjct: 221 IKSTSRPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSR 280

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
            +F+  +   VAVWTALL+GY LN KH+DAL +F GM+R  +LPNQS+  S LNSC  L 
Sbjct: 281 KVFDEKVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALG 340

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
            +D G+E+H VA KLGLE D FVGNSLVVMY+  G + D V+ F ++ +K+ VSWNSIIV
Sbjct: 341 TLDWGKEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIV 400

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNL-CI 476
           GCAQHG G WA  +F QMIR   +PDEIT  GLLSACSH G L KGR  F +    +  I
Sbjct: 401 GCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHI 460

Query: 477 EMTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAK 536
           +   +HY  MVD+LGR G+L EAE LI  M +K N  VWLALLS+C  HS++D  E+AA 
Sbjct: 461 DRKIQHYTCMVDILGRCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAA 520

Query: 537 CVLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFL 596
            +  L    SAAY LLSN+YAS+G+W+ VSK+R KMK  GI+K+PGSSW+ ++G +H+F 
Sbjct: 521 AIFNLDSKSSAAYVLLSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFF 580

Query: 597 SGDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFG 656
           SGD+ H S  +IY+KLE+LR KLKELGY PD + +LHDVE EQKEEML  HSERLAI FG
Sbjct: 581 SGDQPHCS--RIYEKLEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFG 640

Query: 657 LISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           LI+TVEGS +TVMKNLR+C DCH  IKLI+ VVGREIV+RD  RFHHF++G CSCGDYW
Sbjct: 641 LINTVEGSAVTVMKNLRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697

[Close]
BLAST of Carg23088 vs. Swiss-Prot
Match: sp|Q9LW63|PP251_ARATH (Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H32 PE=3 SV=1)

HSP 1 Score: 406.0 bits (1042), Expect = 8.7e-112
Identity = 198/478 (41.42%), Postives = 301/478 (62.97%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           +KP S TL+  L   +       G +IHG +++ G   D YI +SL+  Y+    I+++ 
Sbjct: 238 LKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSE 297

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
            +F+    R+   W +L+ GY  N ++++ALR+F+ M+   V P   + +S + +C  L 
Sbjct: 298 RVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLA 357

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
            +  G+++H    + G  ++IF+ ++LV MY+KCG I+     F RM+  + VSW +II+
Sbjct: 358 TLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIM 417

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIE 476
           G A HG G  A++LF +M R  V P+++  + +L+ACSH GL+ +   +F    K   + 
Sbjct: 418 GHALHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLN 477

Query: 477 MTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKC 536
              EHYA++ DLLGR G+L+EA   I  M ++   +VW  LLSSCS H NL++AE+ A+ 
Sbjct: 478 QELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEK 537

Query: 537 VLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLS 596
           +  +      AY L+ N+YAS+G+W E++K+R +M+ +G+ K+P  SWI +K   H F+S
Sbjct: 538 IFTVDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVS 597

Query: 597 GDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGL 656
           GDRSHPS  KI + L+ +  ++++ GYV D    LHDV+ E K E+L  HSERLA+ FG+
Sbjct: 598 GDRSHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGI 657

Query: 657 ISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           I+T  G+TI V KN+RIC DCH AIK I+K+  REI+VRD+SRFHHF  G CSCGDYW
Sbjct: 658 INTEPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715

[Close]
BLAST of Carg23088 vs. Swiss-Prot
Match: sp|Q9CAA8|PP108_ARATH (Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H22 PE=3 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 9.0e-109
Identity = 194/467 (41.54%), Postives = 282/467 (60.39%), Query Frame = 0 

Query: 248 LTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDLRRNV 307
           L AC  +     G QIH  I++T      Y+ ++LI  Y  CK +  A  +F+   ++NV
Sbjct: 277 LPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNV 336

Query: 308 AVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGREVHSV 367
             WTA++ GYG   + ++A+++F  M R  + P+  +L  A+++C  + +++ G + H  
Sbjct: 337 VSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGK 396

Query: 368 AYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGFGMWA 427
           A   GL + + V NSLV +Y KCG I D    F  M+ ++AVSW +++   AQ G  +  
Sbjct: 397 AITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVET 456

Query: 428 LTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYASMVD 487
           + LF +M++  + PD +TL G++SACS +GL+ KG+ +FK       I  +  HY+ M+D
Sbjct: 457 IQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMID 516

Query: 488 LLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPSCSAA 547
           L  R G L+EA   I+ MP   +   W  LLS+C    NL++ + AA+ ++EL P   A 
Sbjct: 517 LFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIELDPHHPAG 576

Query: 548 YTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPSSRKI 607
           YTLLS++YAS GKW  V+++R+ M+++ + K+PG SWI  KG  H F + D S P   +I
Sbjct: 577 YTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDESSPYLDQI 636

Query: 608 YQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGSTITV 667
           Y KLE L  K+ + GY PD  F  HDVE   K +ML+ HSERLAI FGLI    G  I V
Sbjct: 637 YAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFVPSGQPIRV 696

Query: 668 MKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
            KNLR+C DCHNA K I+ V GREI+VRD+ RFH F+ G CSCGD+W
Sbjct: 697 GKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743

[Close]
BLAST of Carg23088 vs. Swiss-Prot
Match: sp|Q9M2Y7|PP274_ARATH (Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H79 PE=2 SV=1)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-108
Identity = 198/480 (41.25%), Postives = 298/480 (62.08%), Query Frame = 0 

Query: 243 TLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFD---IF 302
           TLA  L A  ++     G Q HG ++K G   + ++ + LI FYS C      +D   +F
Sbjct: 242 TLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVF 301

Query: 303 NNDLRRNVAVWTALLTGYGLNCK-HDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAV 362
              L  ++ VW  +++GY +N +  ++A++ F+ M R+   P+  S     ++C  L + 
Sbjct: 302 QEILSPDLVVWNTMISGYSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSP 361

Query: 363 DRGREVHSVAYKLGL-ENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVG 422
            + +++H +A K  +  N I V N+L+ +Y K G ++D    F RM   NAVS+N +I G
Sbjct: 362 SQCKQIHGLAIKSHIPSNRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKG 421

Query: 423 CAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEM 482
            AQHG G  AL L+ +M+ S + P++IT + +LSAC+H G + +G+ +F    +   IE 
Sbjct: 422 YAQHGHGTEALLLYQRMLDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEP 481

Query: 483 TNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCV 542
             EHY+ M+DLLGR G+L+EAE  I  MP K     W ALL +C KH N+ +AERAA  +
Sbjct: 482 EAEHYSCMIDLLGRAGKLEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANEL 541

Query: 543 LELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSG 602
           + ++P  +  Y +L+N+YA + KW E++ +RK M+ + I K+PG SWI VK  +H F++ 
Sbjct: 542 MVMQPLAATPYVMLANMYADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAE 601

Query: 603 DRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSL--HDVESEQKEEM-LSSHSERLAIGF 662
           D SHP  R++ + LE +  K+K++GYV D K+++   D   E  EEM L  HSE+LA+ F
Sbjct: 602 DWSHPMIREVNEYLEEMMKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAF 661

Query: 663 GLISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           GL+ST +G  + V+KNLRICGDCHNAIK ++ V GREI+VRD+ RFH F+ G CSCGDYW
Sbjct: 662 GLMSTRDGEELVVVKNLRICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721

[Close]
BLAST of Carg23088 vs. Swiss-Prot
Match: sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)

HSP 1 Score: 394.0 bits (1011), Expect = 3.4e-108
Identity = 202/471 (42.89%), Postives = 284/471 (60.30%), Query Frame = 0 

Query: 244  LACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDL 303
            L  A++ACA ++    G QIH     +G   D     +L+T YS C  I+ ++  F    
Sbjct: 594  LTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE 653

Query: 304  RRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGRE 363
              +   W AL++G+  +  +++ALRVF  M R  +  N  +  SA+ +      + +G++
Sbjct: 654  AGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQ 713

Query: 364  VHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGF 423
            VH+V  K G +++  V N+L+ MY KCG I D    F  +S KN VSWN+II   ++HGF
Sbjct: 714  VHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGF 773

Query: 424  GMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYA 483
            G  AL  F QMI S V P+ +TL+G+LSACSH GL+ KG ++F+       +    EHY 
Sbjct: 774  GSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYV 833

Query: 484  SMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPS 543
             +VD+L R G L  A+  I  MPIK +  VW  LLS+C  H N+++ E AA  +LEL P 
Sbjct: 834  CVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPE 893

Query: 544  CSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPS 603
             SA Y LLSNLYA S KW      R+KMK++G+ K+PG SWI VK   H F  GD++HP 
Sbjct: 894  DSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPL 953

Query: 604  SRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGS 663
            + +I++  + L  +  E+GYV D    L++++ EQK+ ++  HSE+LAI FGL+S     
Sbjct: 954  ADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATV 1013

Query: 664  TITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
             I VMKNLR+C DCH  IK ++KV  REI+VRD+ RFHHF  GACSC DYW
Sbjct: 1014 PINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064

[Close]
BLAST of Carg23088 vs. TrEMBL
Match: tr|A0A1S3AZY7|A0A1S3AZY7_CUCME (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103484402 PE=4 SV=1)

HSP 1 Score: 885.6 bits (2287), Expect = 7.6e-254
Identity = 608/711 (85.51%), Postives = 648/711 (91.14%), Query Frame = 0 

Query: 4   VGAKLPTFKILLLSFQFSLSVQRIGCSLISSSSYICLFGTKRFSVSTTPSYNYWLSLHLR 63
           V AKLPT KIL  SFQ SL++     SLI   SYICLFGTKR S STTP+ N  LS HLR
Sbjct: 6   VRAKLPTSKILPFSFQLSLAIIPTTSSLI---SYICLFGTKRNSFSTTPTSNSLLSFHLR 65

Query: 64  NGRINEARSLFDHISSPGVNLYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 123
           NGRINEARSLF+ ISSPGV LY   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 66  NGRINEARSLFNKISSPGVKLYTMMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 125

Query: 124 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 183
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 126 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 185

Query: 184 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASFIKPTSST 243
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX AS+ KP+SST
Sbjct: 186 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLASYFKPSSST 245

Query: 244 LACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAFDIFNNDL 303
           LACALTACANI   FIGVQIHGLI KTG+CFDEY++ASLI+FY+NCKLI+NA  IFN+++
Sbjct: 246 LACALTACANICAPFIGVQIHGLIFKTGYCFDEYVSASLISFYANCKLIENASSIFNDNV 305

Query: 304 RRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLEAVDRGRE 363
           RRNV VWTALLTGYGLNCKH DAL+VFKGMMRM VLPNQSS TSALNSCCGLEAVDRGRE
Sbjct: 306 RRNVVVWTALLTGYGLNCKHTDALQVFKGMMRMSVLPNQSSFTSALNSCCGLEAVDRGRE 365

Query: 364 VHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIVGCAQHGF 423
           VH+VA+KLGLENDIFV NSLVVMYTKCG I DG+A FTRMSRKN VSWNSIIVGCAQHGF
Sbjct: 366 VHAVAHKLGLENDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGF 425

Query: 424 GMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIEMTNEHYA 483
           G WALTLFAQMIR+RVDPDEITL GLLSACSHSG+LTKGR FFKHFGKN CIEMT+EHY+
Sbjct: 426 GRWALTLFAQMIRTRVDPDEITLAGLLSACSHSGMLTKGRCFFKHFGKNFCIEMTSEHYS 485

Query: 484 SMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKCVLELRPS 543
           SMVDLLGR G+L+EAEALIH MP KANY VWLALLSS   HSN+  AERAAK VL+L+P+
Sbjct: 486 SMVDLLGRCGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHTAERAAKHVLDLQPN 545

Query: 544 CSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLSGDRSHPS 603
           CSAAYTLLSNLYAS+GKWTEV KIRKKMKDEGILKQPGSSWIT+KGI+H+F+SGD+SHP 
Sbjct: 546 CSAAYTLLSNLYASTGKWTEVFKIRKKMKDEGILKQPGSSWITIKGIKHNFISGDQSHPL 605

Query: 604 SRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGLISTVEGS 663
           SRKIYQKLEWL GKLKELGYV DPKFSLHDVE EQKEEMLS HSERLAIGFGLISTV+GS
Sbjct: 606 SRKIYQKLEWLGGKLKELGYVADPKFSLHDVEMEQKEEMLSYHSERLAIGFGLISTVDGS 665

Query: 664 TITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           TITVMKNLRICGDCHNA+KL +KVVGREIVVRD+SRFHHFR+G CSCGDYW
Sbjct: 666 TITVMKNLRICGDCHNAVKLTSKVVGREIVVRDTSRFHHFRNGTCSCGDYW 713

[Close]
BLAST of Carg23088 vs. TrEMBL
Match: tr|A0A0A0KLU7|A0A0A0KLU7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521040 PE=4 SV=1)

HSP 1 Score: 847.8 bits (2189), Expect = 1.8e-242
Identity = 410/481 (85.24%), Postives = 443/481 (92.10%), Query Frame = 0 

Query: 234 ASFIKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQ 293
           ASF K TSSTLACALTACANI T FIGVQIHGLIVKTG+CF+EYI+ASLI+FY+NCKLI 
Sbjct: 158 ASF-KATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEYISASLISFYANCKLID 217

Query: 294 NAFDIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCC 353
           NA  IFN+++ RNV VWTALLTGYGLNC+H DAL+VFKGMMRM VLPNQSSLTSALNSCC
Sbjct: 218 NASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQVFKGMMRMSVLPNQSSLTSALNSCC 277

Query: 354 GLEAVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNS 413
           GLEAVDRGREVH+VA+KLGLE+DIFV NSLVVMYTKCG I DG+A FTRMSRKN VSWNS
Sbjct: 278 GLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKCGHINDGIAVFTRMSRKNVVSWNS 337

Query: 414 IIVGCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNL 473
           IIVGCAQHGFG WALTLFAQMIR+RVDPDEITL GLLSAC HSG+LTKGR FFKHFGKN 
Sbjct: 338 IIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLTKGRCFFKHFGKNF 397

Query: 474 CIEMTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERA 533
            IEMTNEHY+SMVDLLGRYG+L+EAEALIH MP KANY VWLALLSS   HSN+ VAERA
Sbjct: 398 GIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKANYMVWLALLSSSINHSNVHVAERA 457

Query: 534 AKCVLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHD 593
           AKCVL+L+P+CSAAYTLLSNLYAS+GKWTEVSKIRKKMKDEGILKQPGSSWIT+KGI+H+
Sbjct: 458 AKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRKKMKDEGILKQPGSSWITIKGIKHN 517

Query: 594 FLSGDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIG 653
           F+SGD+SHP SRKIYQKLEWL GKLKELGYVPDPKFS HDVE+EQKEEMLS HSERLAIG
Sbjct: 518 FISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKFSFHDVETEQKEEMLSYHSERLAIG 577

Query: 654 FGLISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDY 713
           FGLISTVEGSTI VMKNLRICGDCHNA+KL +KVVGREIVVRD SRFHHF +G CSCGDY
Sbjct: 578 FGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVGREIVVRDPSRFHHFHNGTCSCGDY 637

Query: 714 W 715
           W
Sbjct: 638 W 637

[Close]
BLAST of Carg23088 vs. TrEMBL
Match: tr|A0A2N9EJL5|A0A2N9EJL5_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2837 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.7e-203
Identity = 339/477 (71.07%), Postives = 403/477 (84.49%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           ++ TS+TL C LTACANI    +GVQIHG IVK  + FDE+I+ASL+TFYSNCK I NA 
Sbjct: 151 VESTSTTLVCVLTACANIFHLHLGVQIHGQIVKLAYHFDEFISASLVTFYSNCKQIDNAC 210

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
            +F+  + +NV VWTAL+TGYG NCKH+DAL+VF  M+++ VLPNQSSLTSALNSCCGLE
Sbjct: 211 KVFHEIMHKNVVVWTALVTGYGSNCKHEDALKVFGDMIKIGVLPNQSSLTSALNSCCGLE 270

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
           A++RG+E HSVA K GLE D FVGNSL+VMYTKCG I DG+A F R+S KN VSWNS+IV
Sbjct: 271 ALERGKEFHSVAIKFGLETDAFVGNSLIVMYTKCGNISDGIAVFKRISEKNIVSWNSVIV 330

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIE 476
           GCAQHGFG+W LTLF++MIR++VDPDEIT  GLLSACSHSG+L KGRSFFK+F ++  IE
Sbjct: 331 GCAQHGFGLWTLTLFSRMIRAKVDPDEITFTGLLSACSHSGMLQKGRSFFKNFSQDKSIE 390

Query: 477 MTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKC 536
           +  EHYA MV +LGR G+L+EAE LI+ MPIKAN  VWLALLS+   HSN+DVAERAAK 
Sbjct: 391 VKLEHYACMVGVLGRCGKLEEAEELINNMPIKANSMVWLALLSASRMHSNVDVAERAAKH 450

Query: 537 VLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLS 596
           +  L P CSAAY LLSNLYAS+ +W +VS+IR KMK  G++KQ GSSW+T+KG+RH+FLS
Sbjct: 451 IFYLEPHCSAAYVLLSNLYASANRWGDVSRIRGKMKHSGVVKQAGSSWVTLKGLRHEFLS 510

Query: 597 GDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGL 656
           GDRSHP S +I++KL+WL GKLK+ GYVPD +F+LHDVE EQKEEMLS HSERLAIGFGL
Sbjct: 511 GDRSHPLSEQIFKKLDWLGGKLKDFGYVPDQQFALHDVEVEQKEEMLSYHSERLAIGFGL 570

Query: 657 ISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDY 714
           ISTVEGSTITVMKNLR+CGDCH+AIKLIAK+V REI+VRDSSRFHHFR+G CSCGDY
Sbjct: 571 ISTVEGSTITVMKNLRVCGDCHSAIKLIAKIVEREIIVRDSSRFHHFRNGHCSCGDY 627

[Close]
BLAST of Carg23088 vs. TrEMBL
Match: tr|A0A2I4FNH1|A0A2I4FNH1_9ROSI (pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Juglans regia OX=51240 GN=LOC109000704 PE=4 SV=1)

HSP 1 Score: 711.8 bits (1836), Expect = 1.5e-201
Identity = 340/478 (71.13%), Postives = 393/478 (82.22%), Query Frame = 0 

Query: 237 IKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQNAF 296
           ++PT +TL C L+ACANI    +GVQIHG  +K G+CFDE+I+ASLITFY+NCK  +NA 
Sbjct: 228 VEPTVTTLVCVLSACANILALHLGVQIHGHNIKLGYCFDEFISASLITFYANCKQTENAG 287

Query: 297 DIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCGLE 356
             F     +NV VWTAL+TGYG N K+ DAL VF  M++M VLPNQSS TSALNSCCGLE
Sbjct: 288 KAFYEVTHKNVVVWTALVTGYGSNGKYQDALTVFGDMIKMGVLPNQSSFTSALNSCCGLE 347

Query: 357 AVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSIIV 416
           A+DRG+EVH+VA KLGLE D+FVGNS +VMYTKCG I DG+A F R+  KN VSWNSIIV
Sbjct: 348 ALDRGKEVHAVAVKLGLETDVFVGNSNIVMYTKCGNINDGLAVFKRIRNKNTVSWNSIIV 407

Query: 417 GCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLCIE 476
           GCAQHG G WALTLF+QMIR  VDPDEIT  GLLSACSHS +L KGR  FK+F +   IE
Sbjct: 408 GCAQHGCGFWALTLFSQMIRMGVDPDEITFTGLLSACSHSRMLQKGRCVFKYFSEGKHIE 467

Query: 477 MTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAAKC 536
           M  EHYA MVD+LGR GEL+EAE LI  MP+KAN  VWLALLS+C  HSNL+VAERAAKC
Sbjct: 468 MKLEHYACMVDVLGRCGELEEAEELIRRMPMKANSMVWLALLSACRMHSNLNVAERAAKC 527

Query: 537 VLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDFLS 596
           + +L P+CSAAY LLSNLYAS+ +W +VS+IR KMK  GI+K+PGSSW+ +KG+RH FLS
Sbjct: 528 LFDLEPNCSAAYVLLSNLYASANRWGDVSRIRGKMKHSGIIKEPGSSWVILKGLRHKFLS 587

Query: 597 GDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGFGL 656
           GDR HP S+KIY+KL+WL GK+KE GYVPD +F+LHDVE EQKEEMLS HSERLAIGFGL
Sbjct: 588 GDRLHPLSKKIYEKLDWLGGKMKEFGYVPDQQFALHDVEVEQKEEMLSYHSERLAIGFGL 647

Query: 657 ISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 715
           ISTVEGSTI VMKNLR+CGDCH+AIKLIAK+VGREIVVRDSSRFHHFR G CSCGD W
Sbjct: 648 ISTVEGSTIIVMKNLRVCGDCHSAIKLIAKIVGREIVVRDSSRFHHFRDGLCSCGDNW 705

[Close]
BLAST of Carg23088 vs. TrEMBL
Match: tr|W9R8P1|W9R8P1_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015638 PE=4 SV=1)

HSP 1 Score: 697.6 bits (1799), Expect = 2.9e-197
Identity = 326/480 (67.92%), Postives = 395/480 (82.29%), Query Frame = 0 

Query: 235 SFIKPTSSTLACALTACANIRTFFIGVQIHGLIVKTGHCFDEYIAASLITFYSNCKLIQN 294
           S  KPTS+TL CALTA ANI    +G++IHG IVK G+CFDE+  ASLITFY+NCK +++
Sbjct: 215 SGFKPTSTTLVCALTASANIFALHLGLKIHGQIVKLGYCFDEFSYASLITFYANCKQVEH 274

Query: 295 AFDIFNNDLRRNVAVWTALLTGYGLNCKHDDALRVFKGMMRMCVLPNQSSLTSALNSCCG 354
           A  +F   + +NVAVWTAL+TGY LNC+ + AL VF+ M+   VLPNQSS TSALN+CCG
Sbjct: 275 ACKVFKEKMHKNVAVWTALVTGYALNCEPEKALEVFRDMIASGVLPNQSSFTSALNACCG 334

Query: 355 LEAVDRGREVHSVAYKLGLENDIFVGNSLVVMYTKCGQIRDGVAAFTRMSRKNAVSWNSI 414
           LEA+DRG+E+HSVA KLG+ ND FVGN+L+VMY+KCG I  G++ FTR + KN VSWNS+
Sbjct: 335 LEALDRGKEIHSVAIKLGMGNDSFVGNTLIVMYSKCGSINHGISVFTRTNEKNIVSWNSV 394

Query: 415 IVGCAQHGFGMWALTLFAQMIRSRVDPDEITLIGLLSACSHSGLLTKGRSFFKHFGKNLC 474
           I+GCAQHG+GM ALTLF+QM+R+ ++PDEIT  GLLSAC HSG+L K R F K F ++  
Sbjct: 395 IMGCAQHGYGMLALTLFSQMMRAGIEPDEITFTGLLSACRHSGMLQKRRGFSKFFSQDKT 454

Query: 475 IEMTNEHYASMVDLLGRYGELDEAEALIHTMPIKANYTVWLALLSSCSKHSNLDVAERAA 534
            E+  EHYA MVDLLGR G+L+EAE L+  MP +AN  VWLALL +C  HSNLDVAERAA
Sbjct: 455 FEVNQEHYACMVDLLGRCGKLEEAEELVRNMPFEANSMVWLALLGACRLHSNLDVAERAA 514

Query: 535 KCVLELRPSCSAAYTLLSNLYASSGKWTEVSKIRKKMKDEGILKQPGSSWITVKGIRHDF 594
           K V EL P CSAAY LLSN+YAS+ +W++VS++R+ MK  GI+KQPGSSW+T+KG+RH+F
Sbjct: 515 KSVFELDPHCSAAYVLLSNIYASANRWSDVSRVRETMKRNGIVKQPGSSWVTLKGLRHEF 574

Query: 595 LSGDRSHPSSRKIYQKLEWLRGKLKELGYVPDPKFSLHDVESEQKEEMLSSHSERLAIGF 654
            SGDRSHP S KIYQKL+WL  KLKE GYVPD +F+LHDVE+EQKEEMLSSHSERLAI F
Sbjct: 575 RSGDRSHPLSEKIYQKLDWLGVKLKEFGYVPDQQFALHDVEAEQKEEMLSSHSERLAIVF 634

Query: 655 GLISTVEGSTITVMKNLRICGDCHNAIKLIAKVVGREIVVRDSSRFHHFRSGACSCGDYW 714
            L+ST EGSTITVMKNLR+CGDCH+AIKLIAK+VGREIV+RDSSRFHHFR+G CSCGDYW
Sbjct: 635 ALVSTAEGSTITVMKNLRVCGDCHSAIKLIAKIVGREIVLRDSSRFHHFRNGICSCGDYW 694

The following BLAST results are available for this feature:
BLAST of Carg23088 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023518895.10.0e+0098.74pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isofor... [more]
XP_022926451.14.3e-31098.32pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X1 ... [more]
XP_023518896.11.0e-28994.82pentatricopeptide repeat-containing protein At5g46460, mitochondrial-like isofor... [more]
XP_022926452.19.3e-28894.40pentatricopeptide repeat-containing protein At5g46460, mitochondrial isoform X2 ... [more]
XP_023004051.18.7e-28693.70pentatricopeptide repeat-containing protein At5g46460, mitochondrial [Cucurbita ... [more]
BLAST of Carg23088 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G46460.12.5e-17059.29Pentatricopeptide repeat (PPR) superfamily protein[more]
AT3G23330.14.8e-11341.42Tetratricopeptide repeat (TPR)-like superfamily protein[more]
AT1G68930.15.0e-11041.54pentatricopeptide (PPR) repeat-containing protein[more]
AT3G49710.11.9e-10941.25Pentatricopeptide repeat (PPR) superfamily protein[more]
AT4G13650.11.9e-10942.89Pentatricopeptide repeat (PPR) superfamily protein[more]
BLAST of Carg23088 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9FHF9|PP419_ARATH4.6e-16959.29Pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Arabidop... [more]
sp|Q9LW63|PP251_ARATH8.7e-11241.42Putative pentatricopeptide repeat-containing protein At3g23330 OS=Arabidopsis th... [more]
sp|Q9CAA8|PP108_ARATH9.0e-10941.54Putative pentatricopeptide repeat-containing protein At1g68930 OS=Arabidopsis th... [more]
sp|Q9M2Y7|PP274_ARATH3.4e-10841.25Pentatricopeptide repeat-containing protein At3g49710 OS=Arabidopsis thaliana OX... [more]
sp|Q9SVP7|PP307_ARATH3.4e-10842.89Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX... [more]
BLAST of Carg23088 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AZY7|A0A1S3AZY7_CUCME7.6e-25485.51pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Cucumis ... [more]
tr|A0A0A0KLU7|A0A0A0KLU7_CUCSA1.8e-24285.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G521040 PE=4 SV=1[more]
tr|A0A2N9EJL5|A0A2N9EJL5_FAGSY4.7e-20371.07Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2837 PE=4 SV=1[more]
tr|A0A2I4FNH1|A0A2I4FNH1_9ROSI1.5e-20171.13pentatricopeptide repeat-containing protein At5g46460, mitochondrial OS=Juglans ... [more]
tr|W9R8P1|W9R8P1_9ROSA2.9e-19767.92Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_015638 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0005515protein binding
Vocabulary: INTERPRO
TermDefinition
IPR032867DYW_dom
IPR011990TPR-like_helical_dom_sf
IPR002885Pentatricopeptide_repeat
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23088-RACarg23088-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatPFAMPF12854PPR_1coord: 174..201
e-value: 5.9E-8
score: 32.2
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 111..144
e-value: 8.2E-8
score: 32.2
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 177..204
e-value: 6.8E-7
score: 27.1
coord: 84..112
e-value: 2.5E-6
score: 25.3
coord: 409..443
e-value: 1.5E-4
score: 19.7
coord: 309..341
e-value: 7.3E-6
score: 23.8
coord: 114..143
e-value: 2.6E-6
score: 25.3
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 547..576
e-value: 0.01
score: 15.9
coord: 207..233
e-value: 0.05
score: 13.8
coord: 482..505
e-value: 0.47
score: 10.7
coord: 309..336
e-value: 0.0018
score: 18.3
coord: 53..77
e-value: 0.065
score: 13.4
coord: 409..438
e-value: 1.5E-4
score: 21.7
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 81..111
score: 9.284
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 50..80
score: 6.829
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 174..208
score: 11.849
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 478..508
score: 7.103
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 544..578
score: 8.254
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 341..375
score: 5.777
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 306..340
score: 9.701
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 147..173
score: 5.59
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 442..472
score: 5.864
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 376..406
score: 7.213
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 112..146
score: 11.871
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 510..540
score: 5.13
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 407..441
score: 9.854
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 209..239
score: 6.555
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 173..258
e-value: 7.0E-19
score: 70.5
coord: 474..650
e-value: 5.8E-12
score: 47.8
coord: 358..473
e-value: 2.4E-21
score: 78.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 44..172
e-value: 3.3E-27
score: 97.6
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3DG3DSA:1.25.40.10coord: 261..357
e-value: 1.4E-12
score: 49.3
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILYSSF48452TPR-likecoord: 174..591
IPR032867DYW domainPFAMPF14432DYW_deaminasecoord: 580..704
e-value: 2.5E-41
score: 140.4
NoneNo IPR availablePANTHERPTHR24015:SF861SUBFAMILY NOT NAMEDcoord: 38..630
NoneNo IPR availablePANTHERPTHR24015FAMILY NOT NAMEDcoord: 38..630

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg23088Cla009736Watermelon (97103) v1carwmB0957
Carg23088Csa6G521040Cucumber (Chinese Long) v2carcuB0972
Carg23088ClCG01G024200Watermelon (Charleston Gray)carwcgB0931
Carg23088CSPI06G35870Wild cucumber (PI 183967)carcpiB0993
Carg23088Cucsa.047400Cucumber (Gy14) v1carcgyB1075
Carg23088CmaCh07G001440Cucurbita maxima (Rimu)carcmaB1312
Carg23088CmaCh03G013650Cucurbita maxima (Rimu)carcmaB1311
Carg23088CmoCh07G001430Cucurbita moschata (Rifu)carcmoB1281
Carg23088Lsi01G001880Bottle gourd (USVL1VR-Ls)carlsiB871
Carg23088Cp4.1LG19g06380Cucurbita pepo (Zucchini)carcpeB1326
Carg23088CsaV3_6G051350Cucumber (Chinese Long) v3carcucB0999
Carg23088Cla97C01G024150Watermelon (97103) v2carwmbB1005
Carg23088Bhi03G000029Wax gourdcarwgoB1108
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg23088Silver-seed gourdcarcarB510
Carg23088Cucumber (Gy14) v1carcgyB1076
Carg23088Silver-seed gourdcarcarB623
Carg23088Cucumber (Gy14) v2carcgybB0943
Carg23088Cucumber (Gy14) v2carcgybB0944
Carg23088Cucurbita maxima (Rimu)carcmaB1310
Carg23088Cucurbita moschata (Rifu)carcmoB1279
Carg23088Cucurbita moschata (Rifu)carcmoB1280
Carg23088Cucurbita pepo (Zucchini)carcpeB1324
Carg23088Cucurbita pepo (Zucchini)carcpeB1325
Carg23088Cucurbita pepo (Zucchini)carcpeB1327
Carg23088Wild cucumber (PI 183967)carcpiB0992
Carg23088Cucumber (Chinese Long) v2carcuB0971
Carg23088Cucumber (Chinese Long) v3carcucB0998
Carg23088Bottle gourd (USVL1VR-Ls)carlsiB872
Carg23088Melon (DHL92) v3.5.1carmeB0936
Carg23088Melon (DHL92) v3.5.1carmeB0937
Carg23088Melon (DHL92) v3.6.1carmedB0943
Carg23088Melon (DHL92) v3.6.1carmedB0942
Carg23088Watermelon (Charleston Gray)carwcgB0932
Carg23088Watermelon (97103) v1carwmB0956
Carg23088Watermelon (97103) v2carwmbB1006
Carg23088Wax gourdcarwgoB1109