Carg23038 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg23038
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ADP-ribosylation factor, putative
Location	Cucurbita_argyrosperma_scaffold_163 : 106485 .. 108813 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCCCTTTTTCGCTCTCCCTATCTCTCTCTGCAGAGCTTGAAAAAAGGAGACGGCCAAATTGGCGTTCTGATCTGCAGCGAAGAAGCCGAAGAAACGCGAAGCTTTCCCACATTGATTTTCTCAAGTTGATCGAAACCCTAGAACTAAGATACAGGAGAAAAGGAAGAGGAAGAAGGACTTTTTGTCTCTCGAGCATTTTGGTTCGCGATGGGGTTGTGGGAAGCTTTTCTCAATTGGCTTCGAAGGTATGTTGGAACTGGCGATTGAAATTTTAAAGGAAATGGAAAGAAATTTTTCGAATTCTTTTTTATTGGTTGTTTATCTGATATCCGTTATGCTATATGAATATTATGCAATTGATAATATTCGTATCATTTAGATTAGTGAGCGGGAGGATTATGGAGGTGGAACCTGTGTTTGGTCTTCGTTCAGCTAATGGAAATTGATAATTTCTTCCCCTGGTTTCTAACCTCTCTGTTGTATGGAATTTAAGAATATTAATGGGCGAGAGGGCGACTTATTTTGGTTAAATTGGATAATAGATGATTTATCTCCTACCGTGTTCCGAACTGATGGTTTCATTAATTATACAAATGATGGCCATTTACTGCATCGATTCATTACTTATTTCGTTTTTTTGGAACTTTGAAGTTTAATGTTCTAATAATGCCTTGTGCTGTTGTATTGTTCGGAGTTGGTTTGTCTCGCTAAGATGTGTTTTGGTTATCATTTTCCTTGTTATACTTCTGCAAGAACGTGGCCAACGTGGGAGGTGACGATTAGGTTTTCAAGCTTGAATGAGTTCTGATTATAACCTAAAAAATGTAGTTATTTTGGTGGCTGCAATTCAGAACAATGAATGAACTGGTCAAATTGCGTTTGCAATGATGATATTTTCATTTGTTAATTGTTTTGTTGATTAGAAGGTAATTTTCTTAGTTAGAAAAAAAAATTGTGCTTATTAGTTCTTAATTTTTGTTGATTATGATACAAAAATTTAGATTAGAATTAGATTTGGTTGAATTAGATGAGATGTTTGCTTTGGTTCTTCATGTGATGCCCATCTCTGTGGGTTGAGATACATTTGATCATATTTCCTATTGCAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGCAAAACGTCGCTTGTAAATGTTATTGCAGTAAGTAATTGTTCCTAACCAACCATGTGTTAAATATTCTTATATTGGCTACTGCTGATGGCTTATCTTTTCTCTTCCTGATTGTAATTTGCAGACGGGTGGATACAGTGAAGACATGATCCCAACGGTGTGTAATATTTTTGAAAGGAATTATACCATTCTCTTGATATTTGATTGTTTCTGTTGCCTTATTTTGTACCATAATAGCTTATTTTTGCATTTCTCTTCAAAGTATCCTTTCATCTGCAGGTAGGATTTAATATGAAGAAGGTGACTAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTTTCTGCAATTGTGTACGTTACCTATATTTGTTGTATACTTTATTGCTGCATTCTTGGATCTGTGATTCTTGTTTGTTTACAGGGAAAATTTCCTTACTTAGCTGGATTTCTGCTTAAACTTATTTGCCTAACTGTTTAACTTGTTATGGTCTCTGCATTAATTACATGGTCCATATGGAAATCGTAAGTTGCGAACAATTCGGACGTATGATCTAGCATGGTGTTTGAAAATTTCGATATCCAGTGCTGAAAAAAGTTGGTTGAAGAGTACTGCTGACTTCTTGTCTTGCAGTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAATTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCTAAGCAGGATCTCACAGAACGAATGTAAGTTGAATCTAAGAAACCTTGAACTAATAACAATGAGTTCGTTTGTTCTGCAATGATGTTGCTTGTTCCCCACCTCAATATCAATCTCCATTGTTAAGTCAAATGAATGAACACGTAGAAAGTAAAAATGTCTATAAGTGCTTGTTTACAAGTAGTTTGTAGGCAGTTCCTGTGGTTTCTTAAAGACGATTCTTCACCTTGCAGGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATCGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAA

mRNA sequence

TCTTCCCTTTTTCGCTCTCCCTATCTCTCTCTGCAGAGCTTGAAAAAAGGAGACGGCCAAATTGGCGTTCTGATCTGCAGCGAAGAAGCCGAAGAAACGCGAAGCTTTCCCACATTGATTTTCTCAAGTTGATCGAAACCCTAGAACTAAGATACAGGAGAAAAGGAAGAGGAAGAAGGACTTTTTGTCTCTCGAGCATTTTGGTTCGCGATGGGGTTGTGGGAAGCTTTTCTCAATTGGCTTCGAAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGCAAAACGTCGCTTGTAAATGTTATTGCAACGGGTGGATACAGTGAAGACATGATCCCAACGGTAGGATTTAATATGAAGAAGGTGACTAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTTTCTGCAATTGTTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAATTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCTAAGCAGGATCTCACAGAACGAATGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATCGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAA

Coding sequence (CDS)

ATGGGGTTGTGGGAAGCTTTTCTCAATTGGCTTCGAAGTCTCTTTTTCAAGCAAGAGATGGAATTATCTCTGATTGGGCTTCAGAATGCTGGCAAAACGTCGCTTGTAAATGTTATTGCAACGGGTGGATACAGTGAAGACATGATCCCAACGGTAGGATTTAATATGAAGAAGGTGACTAAAGGCAATGTAACAATAAAGCTTTGGGATCTTGGAGGCCAACCAAGGTTCCGTAGTATGTGGGAAAGATATTGCCGTGCAGTTTCTGCAATTGTTTATGTTGTGGATGCTGCTGATTATGAGAACTTGTCTGTCTCAAAAAGTGAATTGCATGACTTGTTGAGTAAGCCTTCACTGAATGGAATCCCCTTGCTGGTATTGGGTAACAAGATTGACAAACAAGGAGCTCTGTCTAAGCAGGATCTCACAGAACGAATGGGACTGAAGTCTATAACTGATAGAGAAGTCTGTTGCTTTATGATATCGTGCAAGAACTCCACCAATATCGACACTGTTATTGACTGGCTCATAAAGCATTCAAAGTCGAAAAACTAA

Protein sequence

MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVTKGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLNGIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHSKSKN

Homology

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BLAST of Carg23038 vs. NCBI nr
Match: XP_022927912.1 (ADP-ribosylation factor-like protein 8a [Cucurbita moschata] >XP_022988966.1 ADP-ribosylation factor-like protein 8a [Cucurbita maxima] >XP_023531913.1 ADP-ribosylation factor-like protein 8a [Cucurbita pepo subsp. pepo] >XP_023531914.1 ADP-ribosylation factor-like protein 8a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 6.5e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

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BLAST of Carg23038 vs. NCBI nr
Match: XP_022972453.1 (ADP-ribosylation factor-like protein 8a [Cucurbita maxima] >XP_023553859.1 ADP-ribosylation factor-like protein 8a [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 8.4e-100
Identity = 183/184 (99.46%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

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BLAST of Carg23038 vs. NCBI nr
Match: XP_022952796.1 (ADP-ribosylation factor-like protein 8a [Cucurbita moschata])

HSP 1 Score: 371.7 bits (953), Expect = 1.4e-99
Identity = 182/184 (98.91%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPL+VLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLMVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

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BLAST of Carg23038 vs. NCBI nr
Match: XP_004136936.1 (PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis sativus] >XP_008455040.1 PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis melo] >KGN43846.1 hypothetical protein Csa_7G071350 [Cucumis sativus])

HSP 1 Score: 368.2 bits (944), Expect = 1.6e-98
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSK DLTERMGLKSITDREVCC+MISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKSDLTERMGLKSITDREVCCYMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

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BLAST of Carg23038 vs. NCBI nr
Match: XP_012093133.1 (ADP-ribosylation factor-like protein 8a [Jatropha curcas] >KDP44509.1 hypothetical protein JCGZ_16342 [Jatropha curcas])

HSP 1 Score: 365.9 bits (938), Expect = 7.9e-98
Identity = 178/184 (96.74%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADY+NLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSKQD TE+MGLKSITDREVCCFMISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKQDFTEQMGLKSITDREVCCFMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

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BLAST of Carg23038 vs. TAIR10
Match: AT3G49870.1 (ADP-ribosylation factor-like A1C)

HSP 1 Score: 342.8 bits (878), Expect = 1.3e-94
Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGL EAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNV+ATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD +NLSVSKSELHDLLSK SLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDK GALSK+ LT+ MGL S+TDREVCCFMISCKNSTNID VIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. TAIR10
Match: AT5G67560.1 (ADP-ribosylation factor-like A1D)

HSP 1 Score: 341.7 bits (875), Expect = 2.9e-94
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLW+A LNWLRSLFFKQEMELSLIGLQNAGKTSLVNV+ATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWDALLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KG+VTIKLWDLGGQPRFRSMWERYCR+VSAIVYVVDAAD +NLSVSKSELHDLLSK SLN
Sbjct: 61  KGSVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDK GALSK+ LT+ MGLKS+TDREVCCFMISCKNSTNID VIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKPGALSKEALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHS 180

Query: 181 KSKN 185
           KS N
Sbjct: 181 KSSN 184

[Close]

BLAST of Carg23038 vs. TAIR10
Match: AT5G37680.1 (ADP-ribosylation factor-like A1A)

HSP 1 Score: 313.2 bits (801), Expect = 1.1e-85
Identity = 146/182 (80.22%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLW++ LNWLRSLFFKQEMELSL+GLQNAGKTSLVN IATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIK+WDLGGQ RFR+MWERYCR VSAIVYV+DAAD +++ +S+SEL+DLL+KPSLN
Sbjct: 61  KGNVTIKIWDLGGQRRFRTMWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLL+LGNKIDK  ALSKQ L +++GL+S+TDREVCC+MISCK+S NID VIDWLIKHS
Sbjct: 121 GIPLLILGNKIDKSEALSKQALVDQLGLESVTDREVCCYMISCKDSINIDAVIDWLIKHS 180

Query: 181 KS 183
           ++
Sbjct: 181 RT 182

[Close]

BLAST of Carg23038 vs. TAIR10
Match: AT3G49860.1 (ADP-ribosylation factor-like A1B)

HSP 1 Score: 275.8 bits (704), Expect = 1.9e-74
Identity = 135/167 (80.84%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 18  QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVTKGNVTIKLWDLGGQPRF 77
           +EMELSL+GLQN+GKTSLVNV+ATG YSEDMIPTVGFNM+KVTK NV I+LWDLGGQPRF
Sbjct: 10  KEMELSLVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAIRLWDLGGQPRF 69

Query: 78  RSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLNGIPLLVLGNKIDKQGAL 137
           R MWERYCRAVS IVYVVDAAD ENLSVS+SELHDLLS  SL GIPLLVLGNKID  GAL
Sbjct: 70  RCMWERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGAL 129

Query: 138 SKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHSKSKN 185
           SK+ LTE MGL S+T REVCC MISCKN T ID + DWL+ HSKSKN
Sbjct: 130 SKEALTEEMGLSSVTSREVCCLMISCKNPTTIDQLTDWLVNHSKSKN 176

[Close]

BLAST of Carg23038 vs. TAIR10
Match: AT2G24765.1 (ADP-ribosylation factor 3)

HSP 1 Score: 114.0 bits (284), Expect = 9.8e-26
Identity = 60/176 (34.09%), Postives = 91/176 (51.70%), Query Frame = 0


Query: 7   FLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVTKGNVTI 66
           F     S+F  +E  + ++GL NAGKT+++  +  G      IPT+GFN++ V   N+  
Sbjct: 5   FTRMFSSVFGNKEARILVLGLDNAGKTTILYRLQMGEV-VSTIPTIGFNVETVQYNNIKF 64

Query: 67  KLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLNGIPLLV 126
           ++WDLGGQ   R  W  Y     A++YVVD++D + + V+K E H +L +  L G  +L+
Sbjct: 65  QVWDLGGQTSIRPYWRCYFPNTQAVIYVVDSSDTDRIGVAKEEFHAILEEDELKGAVVLI 124

Query: 127 LGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHSKS 183
             NK D  GAL    +TE + L  I  R+   F         +   +DWL    KS
Sbjct: 125 FANKQDLPGALDDAAVTEALELHKIKSRQWAIFKTCAVKGEGLFEGLDWLSNTLKS 179

[Close]

BLAST of Carg23038 vs. Swiss-Prot
Match: sp|Q8VY57|ARL8A_ARATH (ADP-ribosylation factor-like protein 8a OS=Arabidopsis thaliana OX=3702 GN=ARL8A PE=2 SV=1)

HSP 1 Score: 342.8 bits (878), Expect = 2.3e-93
Identity = 169/184 (91.85%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGL EAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNV+ATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD +NLSVSKSELHDLLSK SLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDK GALSK+ LT+ MGL S+TDREVCCFMISCKNSTNID VIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. Swiss-Prot
Match: sp|Q93Y31|ARL8B_ARATH (ADP-ribosylation factor-like protein 8b OS=Arabidopsis thaliana OX=3702 GN=ARL8B PE=2 SV=1)

HSP 1 Score: 341.7 bits (875), Expect = 5.2e-93
Identity = 166/184 (90.22%), Postives = 176/184 (95.65%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLW+A LNWLRSLFFKQEMELSLIGLQNAGKTSLVNV+ATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWDALLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KG+VTIKLWDLGGQPRFRSMWERYCR+VSAIVYVVDAAD +NLSVSKSELHDLLSK SLN
Sbjct: 61  KGSVTIKLWDLGGQPRFRSMWERYCRSVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDK GALSK+ LT+ MGLKS+TDREVCCFMISCKNSTNID VIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKPGALSKEALTDEMGLKSLTDREVCCFMISCKNSTNIDQVIDWLVKHS 180

Query: 181 KSKN 185
           KS N
Sbjct: 181 KSSN 184

[Close]

BLAST of Carg23038 vs. Swiss-Prot
Match: sp|Q8W4C8|ARL8C_ARATH (ADP-ribosylation factor-like protein 8c OS=Arabidopsis thaliana OX=3702 GN=ARL8C PE=2 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 2.0e-84
Identity = 146/182 (80.22%), Postives = 170/182 (93.41%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLW++ LNWLRSLFFKQEMELSL+GLQNAGKTSLVN IATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWDSLLNWLRSLFFKQEMELSLVGLQNAGKTSLVNAIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIK+WDLGGQ RFR+MWERYCR VSAIVYV+DAAD +++ +S+SEL+DLL+KPSLN
Sbjct: 61  KGNVTIKIWDLGGQRRFRTMWERYCRGVSAIVYVIDAADRDSVPISRSELNDLLTKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLL+LGNKIDK  ALSKQ L +++GL+S+TDREVCC+MISCK+S NID VIDWLIKHS
Sbjct: 121 GIPLLILGNKIDKSEALSKQALVDQLGLESVTDREVCCYMISCKDSINIDAVIDWLIKHS 180

Query: 181 KS 183
           ++
Sbjct: 181 RT 182

[Close]

BLAST of Carg23038 vs. Swiss-Prot
Match: sp|F4IZ82|ARL8D_ARATH (ADP-ribosylation factor-like protein 8d OS=Arabidopsis thaliana OX=3702 GN=ARL8D PE=3 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 3.5e-73
Identity = 135/167 (80.84%), Postives = 146/167 (87.43%), Query Frame = 0


Query: 18  QEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVTKGNVTIKLWDLGGQPRF 77
           +EMELSL+GLQN+GKTSLVNV+ATG YSEDMIPTVGFNM+KVTK NV I+LWDLGGQPRF
Sbjct: 10  KEMELSLVGLQNSGKTSLVNVVATGEYSEDMIPTVGFNMRKVTKENVAIRLWDLGGQPRF 69

Query: 78  RSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLNGIPLLVLGNKIDKQGAL 137
           R MWERYCRAVS IVYVVDAAD ENLSVS+SELHDLLS  SL GIPLLVLGNKID  GAL
Sbjct: 70  RCMWERYCRAVSMIVYVVDAADTENLSVSRSELHDLLSNASLIGIPLLVLGNKIDIHGAL 129

Query: 138 SKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHSKSKN 185
           SK+ LTE MGL S+T REVCC MISCKN T ID + DWL+ HSKSKN
Sbjct: 130 SKEALTEEMGLSSVTSREVCCLMISCKNPTTIDQLTDWLVNHSKSKN 176

[Close]

BLAST of Carg23038 vs. Swiss-Prot
Match: sp|Q5ZKQ8|ARL8A_CHICK (ADP-ribosylation factor-like protein 8A OS=Gallus gallus OX=9031 GN=ARL8A PE=2 SV=1)

HSP 1 Score: 265.4 bits (677), Expect = 4.7e-70
Identity = 121/183 (66.12%), Postives = 152/183 (83.06%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           + L+   L+W R+LF+K+EMEL+L+GLQ +GKT+ VNVIA+G ++EDMIPTVGFNM+K+T
Sbjct: 2   LALFNKLLDWFRALFWKEEMELTLVGLQYSGKTTFVNVIASGQFNEDMIPTVGFNMRKIT 61

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWD+GGQPRFRSMWERYCR VSAIVY+VDAAD E +  SK+ELH+LL KP L 
Sbjct: 62  KGNVTIKLWDIGGQPRFRSMWERYCRGVSAIVYMVDAADQEKIEASKNELHNLLDKPQLQ 121

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIP+LVLGNK D  GAL +++L E+M L +I DRE+CC+ ISCK   NID  + WLI+HS
Sbjct: 122 GIPVLVLGNKRDLPGALDEKELIEKMNLSAIQDREICCYSISCKEKDNIDITLQWLIQHS 181

Query: 181 KSK 184
           KS+
Sbjct: 182 KSR 184

[Close]

BLAST of Carg23038 vs. TrEMBL
Match: tr|A0A1S3C030|A0A1S3C030_CUCME (ADP-ribosylation factor-like protein 8A OS=Cucumis melo OX=3656 GN=LOC103495310 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSK DLTERMGLKSITDREVCC+MISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKSDLTERMGLKSITDREVCCYMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. TrEMBL
Match: tr|A0A0A0K7Q5|A0A0A0K7Q5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071350 PE=3 SV=1)

HSP 1 Score: 368.2 bits (944), Expect = 1.1e-98
Identity = 180/184 (97.83%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSK DLTERMGLKSITDREVCC+MISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKSDLTERMGLKSITDREVCCYMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. TrEMBL
Match: tr|A0A067LJN8|A0A067LJN8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16342 PE=3 SV=1)

HSP 1 Score: 365.9 bits (938), Expect = 5.2e-98
Identity = 178/184 (96.74%), Postives = 183/184 (99.46%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADY+NLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYDNLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSKQD TE+MGLKSITDREVCCFMISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKQDFTEQMGLKSITDREVCCFMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. TrEMBL
Match: tr|A0A2C9VK92|A0A2C9VK92_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G059700 PE=3 SV=1)

HSP 1 Score: 361.3 bits (926), Expect = 1.3e-96
Identity = 176/184 (95.65%), Postives = 182/184 (98.91%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD++NLSVS+SELHDLLSK SLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADFDNLSVSRSELHDLLSKSSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDKQGALSKQD TE+MGLKSITDREVCCFMISCKNSTNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKQGALSKQDFTEQMGLKSITDREVCCFMISCKNSTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

[Close]

BLAST of Carg23038 vs. TrEMBL
Match: tr|A0A2C9V5Q8|A0A2C9V5Q8_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G083600 PE=3 SV=1)

HSP 1 Score: 360.5 bits (924), Expect = 2.2e-96
Identity = 175/184 (95.11%), Postives = 181/184 (98.37%), Query Frame = 0


Query: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMKKVT 60
           MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNM+KVT
Sbjct: 1   MGLWEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVIATGGYSEDMIPTVGFNMRKVT 60

Query: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADYENLSVSKSELHDLLSKPSLN 120
           KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAAD++NLSVS+SELHDLLSKPSLN
Sbjct: 61  KGNVTIKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADFDNLSVSRSELHDLLSKPSLN 120

Query: 121 GIPLLVLGNKIDKQGALSKQDLTERMGLKSITDREVCCFMISCKNSTNIDTVIDWLIKHS 180
           GIPLLVLGNKIDK GALSKQD TE+MGLKSITDREVCCFMISCKN TNIDTVIDWL+KHS
Sbjct: 121 GIPLLVLGNKIDKSGALSKQDFTEQMGLKSITDREVCCFMISCKNCTNIDTVIDWLVKHS 180

Query: 181 KSKN 185
           KSKN
Sbjct: 181 KSKN 184

The following BLAST results are available for this feature:

BLAST of Carg23038 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927912.1	6.5e-100	100.00	ADP-ribosylation factor-like protein 8a [Cucurbita moschata] >XP_022988966.1 ADP...	[more]
XP_022972453.1	8.4e-100	99.46	ADP-ribosylation factor-like protein 8a [Cucurbita maxima] >XP_023553859.1 ADP-r...	[more]
XP_022952796.1	1.4e-99	98.91	ADP-ribosylation factor-like protein 8a [Cucurbita moschata]	[more]
XP_004136936.1	1.6e-98	97.83	PREDICTED: ADP-ribosylation factor-like protein 8A [Cucumis sativus] >XP_0084550...	[more]
XP_012093133.1	7.9e-98	96.74	ADP-ribosylation factor-like protein 8a [Jatropha curcas] >KDP44509.1 hypothetic...	[more]

BLAST of Carg23038 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49870.1	1.3e-94	91.85	ADP-ribosylation factor-like A1C	[more]
AT5G67560.1	2.9e-94	90.22	ADP-ribosylation factor-like A1D	[more]
AT5G37680.1	1.1e-85	80.22	ADP-ribosylation factor-like A1A	[more]
AT3G49860.1	1.9e-74	80.84	ADP-ribosylation factor-like A1B	[more]
AT2G24765.1	9.8e-26	34.09	ADP-ribosylation factor 3	[more]

BLAST of Carg23038 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8VY57\|ARL8A_ARATH	2.3e-93	91.85	ADP-ribosylation factor-like protein 8a OS=Arabidopsis thaliana OX=3702 GN=ARL8A...	[more]
sp\|Q93Y31\|ARL8B_ARATH	5.2e-93	90.22	ADP-ribosylation factor-like protein 8b OS=Arabidopsis thaliana OX=3702 GN=ARL8B...	[more]
sp\|Q8W4C8\|ARL8C_ARATH	2.0e-84	80.22	ADP-ribosylation factor-like protein 8c OS=Arabidopsis thaliana OX=3702 GN=ARL8C...	[more]
sp\|F4IZ82\|ARL8D_ARATH	3.5e-73	80.84	ADP-ribosylation factor-like protein 8d OS=Arabidopsis thaliana OX=3702 GN=ARL8D...	[more]
sp\|Q5ZKQ8\|ARL8A_CHICK	4.7e-70	66.12	ADP-ribosylation factor-like protein 8A OS=Gallus gallus OX=9031 GN=ARL8A PE=2 S...	[more]

BLAST of Carg23038 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C030\|A0A1S3C030_CUCME	1.1e-98	97.83	ADP-ribosylation factor-like protein 8A OS=Cucumis melo OX=3656 GN=LOC103495310 ...	[more]
tr\|A0A0A0K7Q5\|A0A0A0K7Q5_CUCSA	1.1e-98	97.83	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G071350 PE=3 SV=1	[more]
tr\|A0A067LJN8\|A0A067LJN8_JATCU	5.2e-98	96.74	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16342 PE=3 SV=1	[more]
tr\|A0A2C9VK92\|A0A2C9VK92_MANES	1.3e-96	95.65	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_07G059700 PE=3 SV=...	[more]
tr\|A0A2C9V5Q8\|A0A2C9V5Q8_MANES	2.2e-96	95.11	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_10G083600 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0005622	intracellular

Vocabulary: **Molecular Function**
Term	Definition
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR024156	Small_GTPase_ARF
IPR005225	Small_GTP-bd_dom
IPR006689	Small_GTPase_ARF/SAR

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005622	intracellular
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg23038-RA	Carg23038-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006689	Small GTPase superfamily, ARF/SAR type	PRINTS	PR00328	SAR1GTPBP	coord: 77..102 score: 44.12 coord: 122..143 score: 50.8 coord: 21..44 score: 34.56
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 9..178 e-value: 1.4E-46 score: 158.0
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 20..183 e-value: 4.1E-8 score: -8.5
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 1..184 e-value: 1.5E-26 score: 104.2
None	No IPR available	SMART	SM00178	sar_sub_1	coord: 4..180 e-value: 7.9E-21 score: 85.2
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..181 e-value: 2.4E-55 score: 188.5
None	No IPR available	PANTHER	PTHR11711:SF231	SUBFAMILY NOT NAMED	coord: 1..184
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 1..184
None	No IPR available	CDD	cd04159	Arl10_like	coord: 21..179 e-value: 4.03062E-108 score: 308.093
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 18..175 e-value: 2.6E-20 score: 70.8
IPR024156	Small GTPase superfamily, ARF type	PROSITE	PS51417	ARF	coord: 13..180 score: 19.114
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 17..182

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg23038	Cla001605	Watermelon (97103) v1	carwmB0733
Carg23038	Csa7G071350	Cucumber (Chinese Long) v2	carcuB0751
Carg23038	MELO3C018523	Melon (DHL92) v3.5.1	carmeB0726
Carg23038	ClCG02G006870	Watermelon (Charleston Gray)	carwcgB0711
Carg23038	CSPI07G06820	Wild cucumber (PI 183967)	carcpiB0767
Carg23038	Cucsa.219110	Cucumber (Gy14) v1	carcgyB0825
Carg23038	CmaCh19G005480	Cucurbita maxima (Rimu)	carcmaB1026
Carg23038	CmaCh11G016990	Cucurbita maxima (Rimu)	carcmaB1025
Carg23038	CmoCh11G014210	Cucurbita moschata (Rifu)	carcmoB0997
Carg23038	CmoCh19G005620	Cucurbita moschata (Rifu)	carcmoB0998
Carg23038	Lsi03G005820	Bottle gourd (USVL1VR-Ls)	carlsiB672
Carg23038	Cp4.1LG04g07600	Cucurbita pepo (Zucchini)	carcpeB1033
Carg23038	Cp4.1LG15g04430	Cucurbita pepo (Zucchini)	carcpeB1031
Carg23038	MELO3C018523.2	Melon (DHL92) v3.6.1	carmedB0737
Carg23038	CsaV3_7G007790	Cucumber (Chinese Long) v3	carcucB0770
Carg23038	Cla97C02G033860	Watermelon (97103) v2	carwmbB0766
Carg23038	Bhi05G000908	Wax gourd	carwgoB0866

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg23038	Carg16327	Silver-seed gourd	carcarB456

The following block(s) are covering this gene:


Gene	Organism	Block
Carg23038	Silver-seed gourd	carcarB404
Carg23038	Cucumber (Gy14) v2	carcgybB0729
Carg23038	Cucurbita maxima (Rimu)	carcmaB1027
Carg23038	Cucurbita moschata (Rifu)	carcmoB0999
Carg23038	Cucurbita pepo (Zucchini)	carcpeB1032
Carg23038	Bottle gourd (USVL1VR-Ls)	carlsiB673