Carg23003 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTACTGTGTGAAAGAATAGGAGTGGAACCAATTTGAGGGCGACTCAAGTTTCAGAAGTGCAGATTTGGTGGAGAATTTCTTGATTTGGAAGCGAAGAACTGAATGGGGGAAGACGCCGAATATTTCTCCAAAGATTTCGACTGGGAAGAGCTACGAATTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTCAGCCCTGCGATTCCATTCCCTCAGTTTCTGCAGAAGCCGATTCAGACGCTTGGAGCCGCTTTCACCTCCGCCACTCCTCCGGCAAATTCTTCAAGGTTTTGATTCCTTTTAGCGTATTCGTAGCAACCTAACTTTGTTGTTTCTTTTAGATTAGTTGTGATTTGAGCTCTTTGCGTTTCGCTTCAGGAAAGGCGGTATTTGTTGAAGGAATTCCCTGAACTGGTTTCCTGTAAGAAGAACTGTAAAGTTTTGGAGGTTGGTTGTGGTAATGGAAGCACTGCTCTTCCAATCTTGCGGTAACCTCCAACGTATTGAACTTTTCCTCTGCTTTACTTCTTATTGATGTTCACCAATTTTTTGGGAGTTTGATAACGTAGAAATTTGGTTGATACAAACTAGTTGCATCGTCTTTGTTTATATGAAGTACTGGCCAATTCCTCCATGTTGTATGTTATAGGATTGATAGGTAGCATCTTTGGAAGATGAATATAATCTATATCTCTCCTTTTTTAGGGTTCTTCACATAACCTCTTAATGTGTTCCGTTCTCGATTAGTTACGAGTGAGAGGTGCCCATTGTAAGAGCGAATTGATCCTTCACTTCCTTTTGAGATCTTGATTCTGGACTATCCATCCTACTCTATGCAGGTTCTCATTTGCATCATCGGTAGGATATACGCTCATATAACGATATACTCTTCCATATTCCGTTGAAATTCGAAACTTTTCATGTAGGTTGATATTCATATACTTCGTCGATAAAGTTAGAGCTTATAGAAAACAATGATAATTGATTGGCCAAGTTGAGACATTTAGTGAGGGCCTATGGAAAATGACCTTTTGGTTTTTAACACCGAAACCACTTAGAACGGAGTATGGTCGCTTCATTTTCCTCATCTCTCCCCTTCTAAATGAAGGATTGTATACATTTTTCTAACTTTGTTCAAGAGCTGAATCACAGATATTCCTTCATGAAACTTTATTAGGTGTTTTGAGTGCATCTGCGAAGATTATGGAATCGAACACAGCGTTCACAATGTTTTATGTTCATCCCAGTACTTGTAGTGCTTTTGCATGTTCAAGATAGAAGAAATTTGTACCATTAAATATGGCCTTTGAGTGGTAGATCTTATTGCTACCAATTCATTATCTTTACACATGATTACTTTCTTTGTAGTGGGAACGAAAATATTGTCATCTATGCTTGCGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGAGATTATAAATGATGTCGGTATTGCATCTTTAAAAGATCGATTCTGTCCATTCTATTGTGATTTTTCTACTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTCGCTACAGCAGCCGAGTTTTACTACTCCAGGTTGTTATTTTGCCTACCCCTTTAGACATAACTCATTATGTGATGTCCCACGTTAGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAACCTTGAGGGAAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATCTGCTAACGGTGGATCTGGGTCGTTACACATCAACTGCAAGACTACTGCTTTCCTTACAGCCTTGCACCCTTATCCATCTTTCTCTATGTTTGCAGAGAAGGAAGGATCCCAGGCCACCGAATCAGAAGAAAGTGAATGTTGCATTGGTGGGGTTGATTTTCTTACTTTGGTATGCTCCTCTTTTTGTATTTTTATATAGTTACTCTAATTTTATCCAATGCATTGGTTTAATATATATATATATATATATACACACACTTGGTGGAGCATTTTATATTTGCAAAGAAATTAATGAAATATCTAAATGGTGTTAAGGCATGAACGCTCTCTCCCTTGGTGAAAACTAATACATTGTGCAACATTAACAAACTTCCTTCACTTCTAATGATTTCTTGTGTGATGTCCCACTGACAAACCCTAAATGGTGTGGAAACCTTTCTCTAGCAGACGTGTTTCAAAGCCTTAAGGAGAAGCCCGAAAGGGAAAACCCAAAAAGGACAATATCTGCTAGTGGTGGATTTGGGCCGTTACATCTTAAATCTTGGTAATGACAGTTGAATGTTCTTTGGCCTTTTTTACACTATTTCAGATATTTACACTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCGATTAGAGAATGCTATATGGCGTTGAAGCCTGGAGGCCTGCTCTTATTTCGCGACTACGGTAATAGATTATGATTAGATTGATGATGTTATTTTAGTTTGCTTTAAATCCGAAGTATAGAAAATTCCTGTCCTTTCTAGCTCATGTAACGTGTTTTAAACATTCTGCTGATCCATATCCTGTTTAACGGAATGCAGGTCTATATGATATGACGATGCTTCGATTCGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCCGATTGGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCACTGCAGGCTTCGTTGAGGTACTTACTACCAGGTTTAAATACATATACTTCATTATTATAGTTCATATCCCAAACTGTTTACAACAATGGTGATGTCCTGTTACTGACCTTATAAAGTATAGAAAATAATTGATACCGTCCCGACTAACTTTAGAGCATGATTATCGTTGCAGCTCGAGTTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGTAAGAGAATGGAGAGGGTGTGGGTTCATGGAAAATTTCAGAAGCCTGTGTCATGAATCATGCTAGAGACACAGAGCAACATTTCAAAGGAATTTTCTCTAGTTCATCTGGAAGTGTTGTGGTGGAATGTTTGTGGCTGTTCATCTATGAGGTTCTCTTGTTTCGGTTAGTCCATTTAAAGGTTAACAGCGTTAATGCTACTTTTAAAATTTTATAGGTATTTTTTAAACATACTACAAGAGTAAGTGTAACAGTCCAAGTCCACCGCTAACAGATGTTCGTTACGTATCGTCGTCGTCTCACAATTTTAAAATGCATCTGTTAGATAGGTTTTTACGCTTCTGTGAGGAATGCTTTGTTCCCGTTTTCAACTGATGAGG TTCTACTGTGTGAAAGAATAGGAGTGGAACCAATTTGAGGGCGACTCAAGTTTCAGAAGTGCAGATTTGGTGGAGAATTTCTTGATTTGGAAGCGAAGAACTGAATGGGGGAAGACGCCGAATATTTCTCCAAAGATTTCGACTGGGAAGAGCTACGAATTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTCAGCCCTGCGATTCCATTCCCTCAGTTTCTGCAGAAGCCGATTCAGACGCTTGGAGCCGCTTTCACCTCCGCCACTCCTCCGGCAAATTCTTCAAGGAAAGGCGGTATTTGTTGAAGGAATTCCCTGAACTGGTTTCCTGTAAGAAGAACTGTAAAGTTTTGGAGGTTGGTTGTGGTAATGGAAGCACTGCTCTTCCAATCTTGCGTGGGAACGAAAATATTGTCATCTATGCTTGCGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGAGATTATAAATGATGTCGGTATTGCATCTTTAAAAGATCGATTCTGTCCATTCTATTGTGATTTTTCTACTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTCGCTACAGCAGCCGAGTTTTACTACTCCAGAGAAGGAAGGATCCCAGGCCACCGAATCAGAAGAAAGTGAATGTTGCATTGGTGGGGTTGATTTTCTTACTTTGATATTTACACTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCGATTAGAGAATGCTATATGGCGTTGAAGCCTGGAGGCCTGCTCTTATTTCGCGACTACGGTCTATATGATATGACGATGCTTCGATTCGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCCGATTGGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCACTGCAGGCTTCGTTGAGCTCGAGTTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGTAAGAGAATGGAGAGGGTGTGGGTTCATGGAAAATTTCAGAAGCCTGTGTCATGAATCATGCTAGAGACACAGAGCAACATTTCAAAGGAATTTTCTCTAGTTCATCTGGAAGTGTTGTGGTGGAATGTTTGTGGCTGTTCATCTATGAGGTTCTCTTGTTTCGGTTAGTCCATTTAAAGGTTAACAGCGTTAATGCTACTTTTAAAATTTTATAGGTATTTTTTAAACATACTACAAGAGTAAGTGTAACAGTCCAAGTCCACCGCTAACAGATGTTCGTTACGTATCGTCGTCGTCTCACAATTTTAAAATGCATCTGTTAGATAGGTTTTTACGCTTCTGTGAGGAATGCTTTGTTCCCGTTTTCAACTGATGAGG ATGGGGGAAGACGCCGAATATTTCTCCAAAGATTTCGACTGGGAAGAGCTACGAATTCGGGTCGAGAACGACCCGCTTTTGCAGTACCATTTGCTTCCATTTCAGCCCTGCGATTCCATTCCCTCAGTTTCTGCAGAAGCCGATTCAGACGCTTGGAGCCGCTTTCACCTCCGCCACTCCTCCGGCAAATTCTTCAAGGAAAGGCGGTATTTGTTGAAGGAATTCCCTGAACTGGTTTCCTGTAAGAAGAACTGTAAAGTTTTGGAGGTTGGTTGTGGTAATGGAAGCACTGCTCTTCCAATCTTGCGTGGGAACGAAAATATTGTCATCTATGCTTGCGATTGTAGCACGGAAACTCTTGAGAGAGCTAAAGAGATTATAAATGATGTCGGTATTGCATCTTTAAAAGATCGATTCTGTCCATTCTATTGTGATTTTTCTACTAGTAAGTTTCCAACATGGTTGGCCTGCAATTCATGCCGTGGAAACACTTCGCTACAGCAGCCGAGTTTTACTACTCCAGAGAAGGAAGGATCCCAGGCCACCGAATCAGAAGAAAGTGAATGTTGCATTGGTGGGGTTGATTTTCTTACTTTGATATTTACACTATCAGCAGTGCCTCTCCAGAGGATGCCAGCATCGATTAGAGAATGCTATATGGCGTTGAAGCCTGGAGGCCTGCTCTTATTTCGCGACTACGGTCTATATGATATGACGATGCTTCGATTCGGGCAAGATCAAAGAGTAGGATTCAGGGAATATGTCCGATTGGATGGAACACGTTCTTATTTCTTCTGCTTAAATACCTTGAGAGATCTGTTTGTCACTGCAGGCTTCGTTGAGCTCGAGTTGGAATATTGTTGTGTGAAGTCCTTGAATCGCCGAAATGGTAAGAGAATGGAGAGGGTGTGGGTTCATGGAAAATTTCAGAAGCCTGTGTCATGA MGEDAEYFSKDFDWEELRIRVENDPLLQYHLLPFQPCDSIPSVSAEADSDAWSRFHLRHSSGKFFKERRYLLKEFPELVSCKKNCKVLEVGCGNGSTALPILRGNENIVIYACDCSTETLERAKEIINDVGIASLKDRFCPFYCDFSTSKFPTWLACNSCRGNTSLQQPSFTTPEKEGSQATESEESECCIGGVDFLTLIFTLSAVPLQRMPASIRECYMALKPGGLLLFRDYGLYDMTMLRFGQDQRVGFREYVRLDGTRSYFFCLNTLRDLFVTAGFVELELEYCCVKSLNRRNGKRMERVWVHGKFQKPVS
BLAST of Carg23003 vs. NCBI nr
Match: XP_022946675.1 (methyltransferase-like protein 6 [Cucurbita moschata]) HSP 1 Score: 652.9 bits (1683), Expect = 5.5e-184 Identity = 311/314 (99.04%), Postives = 312/314 (99.36%), Query Frame = 0
BLAST of Carg23003 vs. NCBI nr
Match: XP_022999088.1 (methyltransferase-like protein 6 [Cucurbita maxima]) HSP 1 Score: 641.7 bits (1654), Expect = 1.3e-180 Identity = 306/314 (97.45%), Postives = 310/314 (98.73%), Query Frame = 0
BLAST of Carg23003 vs. NCBI nr
Match: XP_023545623.1 (methyltransferase-like protein 6 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 638.3 bits (1645), Expect = 1.4e-179 Identity = 305/314 (97.13%), Postives = 308/314 (98.09%), Query Frame = 0
BLAST of Carg23003 vs. NCBI nr
Match: XP_011648734.1 (PREDICTED: methyltransferase-like protein 6 [Cucumis sativus] >KGN60773.1 hypothetical protein Csa_2G009600 [Cucumis sativus]) HSP 1 Score: 580.5 bits (1495), Expect = 3.5e-162 Identity = 276/316 (87.34%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Carg23003 vs. NCBI nr
Match: XP_008456399.1 (PREDICTED: methyltransferase-like protein 6 isoform X1 [Cucumis melo]) HSP 1 Score: 579.7 bits (1493), Expect = 5.9e-162 Identity = 277/316 (87.66%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of Carg23003 vs. TAIR10
Match: AT1G54650.2 (Methyltransferase family protein) HSP 1 Score: 392.1 bits (1006), Expect = 3.2e-109 Identity = 198/312 (63.46%), Postives = 227/312 (72.76%), Query Frame = 0
BLAST of Carg23003 vs. TAIR10
Match: AT2G26200.1 (S-adenosyl-L-methionine-dependent methyltransferases superfamily protein) HSP 1 Score: 136.3 bits (342), Expect = 3.1e-32 Identity = 85/267 (31.84%), Postives = 122/267 (45.69%), Query Frame = 0
BLAST of Carg23003 vs. Swiss-Prot
Match: sp|Q6AXU8|METL6_RAT (Methyltransferase-like protein 6 OS=Rattus norvegicus OX=10116 GN=Mettl6 PE=2 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 1.0e-32 Identity = 94/267 (35.21%), Postives = 131/267 (49.06%), Query Frame = 0
BLAST of Carg23003 vs. Swiss-Prot
Match: sp|Q8TCB7|METL6_HUMAN (Methyltransferase-like protein 6 OS=Homo sapiens OX=9606 GN=METTL6 PE=2 SV=2) HSP 1 Score: 141.4 bits (355), Expect = 1.8e-32 Identity = 94/266 (35.34%), Postives = 129/266 (48.50%), Query Frame = 0
BLAST of Carg23003 vs. Swiss-Prot
Match: sp|Q8BVH9|METL6_MOUSE (Methyltransferase-like protein 6 OS=Mus musculus OX=10090 GN=Mettl6 PE=2 SV=2) HSP 1 Score: 140.2 bits (352), Expect = 3.9e-32 Identity = 93/267 (34.83%), Postives = 130/267 (48.69%), Query Frame = 0
BLAST of Carg23003 vs. Swiss-Prot
Match: sp|Q5RDV8|METL6_PONAB (Methyltransferase-like protein 6 OS=Pongo abelii OX=9601 GN=METTL6 PE=2 SV=1) HSP 1 Score: 135.6 bits (340), Expect = 9.7e-31 Identity = 93/266 (34.96%), Postives = 127/266 (47.74%), Query Frame = 0
BLAST of Carg23003 vs. Swiss-Prot
Match: sp|Q8T199|OMT3_DICDI (O-methyltransferase 3 OS=Dictyostelium discoideum OX=44689 GN=omt3 PE=2 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 2.4e-29 Identity = 82/247 (33.20%), Postives = 120/247 (48.58%), Query Frame = 0
BLAST of Carg23003 vs. TrEMBL
Match: tr|A0A0A0LG62|A0A0A0LG62_CUCSA (Methyltransferase-like protein OS=Cucumis sativus OX=3659 GN=Csa_2G009600 PE=3 SV=1) HSP 1 Score: 580.5 bits (1495), Expect = 2.3e-162 Identity = 276/316 (87.34%), Postives = 290/316 (91.77%), Query Frame = 0
BLAST of Carg23003 vs. TrEMBL
Match: tr|A0A1S3C384|A0A1S3C384_CUCME (Methyltransferase-like protein OS=Cucumis melo OX=3656 GN=LOC103496346 PE=3 SV=1) HSP 1 Score: 579.7 bits (1493), Expect = 3.9e-162 Identity = 277/316 (87.66%), Postives = 289/316 (91.46%), Query Frame = 0
BLAST of Carg23003 vs. TrEMBL
Match: tr|A0A1S4DYQ1|A0A1S4DYQ1_CUCME (Methyltransferase-like protein OS=Cucumis melo OX=3656 GN=LOC103496346 PE=3 SV=1) HSP 1 Score: 542.0 bits (1395), Expect = 9.1e-151 Identity = 265/316 (83.86%), Postives = 276/316 (87.34%), Query Frame = 0
BLAST of Carg23003 vs. TrEMBL
Match: tr|A0A2I4EXP1|A0A2I4EXP1_9ROSI (Methyltransferase-like protein OS=Juglans regia OX=51240 GN=LOC108993642 PE=3 SV=1) HSP 1 Score: 456.8 bits (1174), Expect = 3.8e-125 Identity = 216/313 (69.01%), Postives = 255/313 (81.47%), Query Frame = 0
BLAST of Carg23003 vs. TrEMBL
Match: tr|B9I5L8|B9I5L8_POPTR (Methyltransferase-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_013G044300v3 PE=3 SV=2) HSP 1 Score: 450.3 bits (1157), Expect = 3.6e-123 Identity = 211/316 (66.77%), Postives = 256/316 (81.01%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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