Carg22968 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22968
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Cold-regulated protein
Location	Cucurbita_argyrosperma_scaffold_319 : 172093 .. 173990 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTTCTTCTTCTTCTTATACTTCTGTAATTTCATCAGATCGGAAGATCAAAGCGGCCGTACTGAAATGGTGAAACCGAGCTACTTGAAAATGTTGACGGATTCTGACGTTTCCGATCTTATCTCCTCTGATCTTCGGGAACTTCGTAACGCTGGTAAAAAGCTTGCTACACACGTCGTTAAGCTTAGTGCTGTGGGTTTTGGCGCTACTTTCCTCCAATGGATTGCTTCCTTTGCTGCTATGTATGTTTCTCTCTCTCATATGGCTTTATTCCTGCTTCATTTAGCGATGTTGTTGTTTGTGGTTCGTTGCTGACGGTTGATTGTTTTAGAGGAAATTTTAGTTGTGAGAGGCTTCTGTTTCGAGGAATAGTTTGTGTTTAGTGATCGATTTTCTGTTTAACTGAAGTGATTCCTTTCTTGAATTAGATATTGAACTGATTGAGGAATATGAGAAGGATTTAGTTAGGGAAATGATTACTGTAACCAAATGTTCGTTTTCGTTTTGATATCTGCTTGATCTTCTTTTAGGTTTTTCTGGATCATTTCGATTCGACTTCGATTCCTTTCTGTTCTTATTATTGTACACTTTTGCAACTTGAATTTTTTTTGTGAGTGCAGTTACTTGCTGATTTTGGATCGAACGAACTGGAAGACGAATATACTTACCTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCTGGTTTGATTTTCGGTTTTCTCAGGTGATCATCTCTATAGCAATTGGCTCCGAATGAAGCTCCCGGAATTACGCTTCTGTCGTCTCTAACTAAATTGCTTTCTCTTGCAGGGGAGAGGTCGGAAAGTGGATCGCCGCCATTGCTGTAGTGCTGCGTCTCTTCTTCCCACGACGATTCCCAGGTAGTTTTCAGGACTCGACTTGATTACAGAAATTACAGAATTCAGTTTCAGTTTATGAACTACAAAATATTCTGGATGATGAGTTTCTTGAAATAGATTTAGAGCCACCAGTAGTTTTGATTACTCTCTTCTTCCTTCTGTTTCATTTTGGATGACTGCCACAATGACTAGTTTTATATTCTCCTTTTCATTTCTTGCTAAGAACTATTGAAATCTTAACAATGAAGAAGAATCATTATCAAACTGTTTAACATCTTTGAGCCTGTAAAAAGTTAGATAGATCTTAAAGCATCAAAATGATCAAAAAGTTTAGTTGAAGTATACTACCATTAGGTATTTAACATACCTTCGAACTTTTTGTAAGGAATCCTTCCCAACAATCCTCAATAATCCTCCCCTCGAACAAAGTACATTATAGAGGCTTCCCTGATGCTTATGGAGCTCTCGAAAAGCCTCTCTTTAATCGAGGCTACATTAGCAAATGAGGGACTCCTTCCCAACGATCGGCAGCACTTTCACACTTGCATTCCAATTTCGAAGGTAATATGATTTGCTTAGTTTGAAGGAACAAACAACATCCCAAACCTCATCCATAATCAAATATCCTCCAATCTAATAGCTTAAGCTTTCAGTAAATAGAAATTTCACATCATGTTGAAGTATAGTATGTCCTGTCTAGTTTGCAAGCTTAAGAGCCAAAAGAATTAGATGTCAAAACTGAATTATTGCACTCCCTTCTCTCATTGCCTGGAAATACAGATTGGCTTGAATTGCCTGGCGCTTTGATACTTCTAATTGTGGTGGCTCCGGGGTTATTTGCGAGCACCATAAGGGGCGACGCCATCGGAGAAGTGATATGTCTGATAATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAATGGCATTTCAAACACCATTGGCATTGTCCTTCTCTTTGTTTTTCCTGTCTGGGCTCTGTTACTTCGCGTGCTTTGA

mRNA sequence

TTCTTCTTCTTCTTCTTATACTTCTGTAATTTCATCAGATCGGAAGATCAAAGCGGCCGTACTGAAATGGTGAAACCGAGCTACTTGAAAATGTTGACGGATTCTGACGTTTCCGATCTTATCTCCTCTGATCTTCGGGAACTTCGTAACGCTGGTAAAAAGCTTGCTACACACGTCGTTAAGCTTAGTGCTGTGGGTTTTGGCGCTACTTTCCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGCTGATTTTGGATCGAACGAACTGGAAGACGAATATACTTACCTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCTGGTTTGATTTTCGGTTTTCTCAGGGGAGAGGTCGGAAAGTGGATCGCCGCCATTGCTGTAGTGCTGCGTCTCTTCTTCCCACGACGATTCCCAGATTGGCTTGAATTGCCTGGCGCTTTGATACTTCTAATTGTGGTGGCTCCGGGGTTATTTGCGAGCACCATAAGGGGCGACGCCATCGGAGAAGTGATATGTCTGATAATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAATGGCATTTCAAACACCATTGGCATTGTCCTTCTCTTTGTTTTTCCTGTCTGGGCTCTGTTACTTCGCGTGCTTTGA

Coding sequence (CDS)

ATGGTGAAACCGAGCTACTTGAAAATGTTGACGGATTCTGACGTTTCCGATCTTATCTCCTCTGATCTTCGGGAACTTCGTAACGCTGGTAAAAAGCTTGCTACACACGTCGTTAAGCTTAGTGCTGTGGGTTTTGGCGCTACTTTCCTCCAATGGATTGCTTCCTTTGCTGCTATTTACTTGCTGATTTTGGATCGAACGAACTGGAAGACGAATATACTTACCTCATTGTTGATTCCGTACATTTTCTTTAGTCTTCCTGGTTTGATTTTCGGTTTTCTCAGGGGAGAGGTCGGAAAGTGGATCGCCGCCATTGCTGTAGTGCTGCGTCTCTTCTTCCCACGACGATTCCCAGATTGGCTTGAATTGCCTGGCGCTTTGATACTTCTAATTGTGGTGGCTCCGGGGTTATTTGCGAGCACCATAAGGGGCGACGCCATCGGAGAAGTGATATGTCTGATAATATCATGCTATTTGCTGCAAGAACACATCAGAGCCTCTGGTGGATTCAGAAACTCCTTCACCAAAGCCAATGGCATTTCAAACACCATTGGCATTGTCCTTCTCTTTGTTTTTCCTGTCTGGGCTCTGTTACTTCGCGTGCTTTGA

Protein sequence

MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIYLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDWLELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIVLLFVFPVWALLLRVL

Homology

[Close]

BLAST of Carg22968 vs. NCBI nr
Match: XP_023532118.1 (cold-regulated 413 plasma membrane protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391.0 bits (1003), Expect = 2.5e-105
Identity = 202/202 (100.00%), Postives = 202/202 (100.00%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY
Sbjct: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGIVLLFVFPVWALLLRVL
Sbjct: 181 SNTIGIVLLFVFPVWALLLRVL 202

[Close]

BLAST of Carg22968 vs. NCBI nr
Match: XP_022948197.1 (cold-regulated 413 plasma membrane protein 2-like [Cucurbita moschata])

HSP 1 Score: 388.3 bits (996), Expect = 1.6e-104
Identity = 201/202 (99.50%), Postives = 201/202 (99.50%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY
Sbjct: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLP LIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPDLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGIVLLFVFPVWALLLRVL
Sbjct: 181 SNTIGIVLLFVFPVWALLLRVL 202

[Close]

BLAST of Carg22968 vs. NCBI nr
Match: XP_023007529.1 (cold-regulated 413 plasma membrane protein 2-like [Cucurbita maxima])

HSP 1 Score: 387.9 bits (995), Expect = 2.1e-104
Identity = 200/202 (99.01%), Postives = 200/202 (99.01%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY
Sbjct: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIA IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGIVLLFVFPVW LLLRVL
Sbjct: 181 SNTIGIVLLFVFPVWVLLLRVL 202

[Close]

BLAST of Carg22968 vs. NCBI nr
Match: XP_008459238.1 (PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo])

HSP 1 Score: 356.3 bits (913), Expect = 6.9e-95
Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKP++LKM+TDSD +DLISSDLREL NA +KLATH VKL A GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGE GKW+A IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAP LFASTIR DAIGE ICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGI+LLFVFPVWAL+LRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Carg22968 vs. NCBI nr
Match: XP_023512618.1 (cold-regulated 413 plasma membrane protein 2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 3.4e-94
Identity = 180/202 (89.11%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKPSYLKM+TDSD +DLIS+DLREL NA KKLATH V+L A GF A FLQW+ASFAAIY
Sbjct: 1   MVKPSYLKMVTDSDAADLISTDLRELGNAAKKLATHAVQLVASGFPAAFLQWLASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IF FLRGE GKW+AAIAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFFFLRGEFGKWVAAIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAPGLFAST+R DAIGE ICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPGLFASTMRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGI+LLFVFPVWALL+RVL
Sbjct: 181 SNTIGIILLFVFPVWALLVRVL 202

[Close]

BLAST of Carg22968 vs. TAIR10
Match: AT3G50830.1 (cold-regulated 413-plasma membrane 2)

HSP 1 Score: 265.8 bits (678), Expect = 2.2e-71
Identity = 135/203 (66.50%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 1   MVKPSYLKMLTDS-DVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAI 60
           M +  YL M TD  D   L++SD+ EL+ A KKL + V KL  +GFG +FL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP +IF FL G+VGKWIA +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IRG  IG VI L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIVLLFVFPVWALLLRVL 203
           +SNT+GI+LL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of Carg22968 vs. TAIR10
Match: AT2G15970.1 (cold regulated 413 plasma membrane 1)

HSP 1 Score: 252.3 bits (643), Expect = 2.5e-67
Identity = 125/181 (69.06%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 18  LISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  A K LATH   L+ +GFG + L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDWLELPGALILLIVVAPGL 137
           LIPYIFFSLP LIFG  RGE+GKWIA +AVV++LFFP+   ++LELP AL+LL VVAP L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIVLLFVFPVWAL 197
            A T R   IG  ICL I CYLLQEHIRASGGFRN+FTKANGISNT+GI+ L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 L 199
           +
Sbjct: 196 I 196

[Close]

BLAST of Carg22968 vs. TAIR10
Match: AT4G37220.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 246.5 bits (628), Expect = 1.4e-65
Identity = 118/201 (58.71%), Postives = 152/201 (75.62%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           M +  +L M T+ + ++LI+SD+ E   A KKL   V  L  VGFG + LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP +IF F  G+ GKWIA IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+P L A T+R   +G VICL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRV 202
           SNTIGIV L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of Carg22968 vs. TAIR10
Match: AT2G23680.1 (Cold acclimation protein WCOR413 family)

HSP 1 Score: 144.1 bits (362), Expect = 9.7e-35
Identity = 74/150 (49.33%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP +IF  LR  VGKWIA + 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPGLFASTIRGDA--IGEVICLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV P    +  R D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIVLLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of Carg22968 vs. TAIR10
Match: AT1G29395.1 (COLD REGULATED 314 INNER MEMBRANE 1)

HSP 1 Score: 74.7 bits (182), Expect = 7.2e-14
Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 0


Query: 7   LKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIYLLILDR 66
           L++  D   +  +S+ + + R  G  +  +   +S     A  LQWI++ + + L++   
Sbjct: 47  LRLSGDRQRTATVSTRVEKRRKRGSSVVCYAAPIS-----ANSLQWISTISCLALMLAR- 106

Query: 67  TNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDWLELPGA 126
               T I  S+++P      P  I  +++GE G W A +A++ RLFF   FP  LELP  
Sbjct: 107 ---GTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF--TFPGELELPFI 166

Query: 127 LILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGI 186
            +LL++VAP      IRG   G +I + IS +L  +H   +G    ++ K + ++ T+ I
Sbjct: 167 ALLLVIVAP-YQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLA-TVAI 225

Query: 187 VLLFVFPVWALL 199
           + + V  +  LL
Sbjct: 227 IGVTVVSLLLLL 225

[Close]

BLAST of Carg22968 vs. Swiss-Prot
Match: sp|Q9SVL6|CRPM2_ARATH (Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=COR413PM2 PE=2 SV=1)

HSP 1 Score: 265.8 bits (678), Expect = 4.0e-70
Identity = 135/203 (66.50%), Postives = 163/203 (80.30%), Query Frame = 0


Query: 1   MVKPSYLKMLTDS-DVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAI 60
           M +  YL M TD  D   L++SD+ EL+ A KKL + V KL  +GFG +FL+++ASFAAI
Sbjct: 1   MGRMDYLAMKTDDVDTVALVNSDMEELKVAAKKLFSDVSKLGGLGFGVSFLKFLASFAAI 60

Query: 61  YLLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPD 120
           YLLILDRTNWKT +LTSLLIPYIF SLP +IF FL G+VGKWIA +AVVLRLFFP+ FPD
Sbjct: 61  YLLILDRTNWKTKMLTSLLIPYIFLSLPSVIFNFLSGDVGKWIAFVAVVLRLFFPKHFPD 120

Query: 121 WLELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANG 180
           WLE+PG+LILL+VV+P   A  IRG  IG VI L I CYLLQEHIRASGGFRNSFT+  G
Sbjct: 121 WLEMPGSLILLLVVSPHFLAHHIRGTWIGTVISLFIGCYLLQEHIRASGGFRNSFTQPRG 180

Query: 181 ISNTIGIVLLFVFPVWALLLRVL 203
           +SNT+GI+LL V+PVWAL++RV+
Sbjct: 181 VSNTLGIILLLVYPVWALIVRVM 203

[Close]

BLAST of Carg22968 vs. Swiss-Prot
Match: sp|Q9XIM7|CRPM1_ARATH (Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=COR413PM1 PE=2 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 4.6e-66
Identity = 125/181 (69.06%), Postives = 145/181 (80.11%), Query Frame = 0


Query: 18  LISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIYLLILDRTNWKTNILTSL 77
           +I SD  EL  A K LATH   L+ +GFG + L+W+AS AAIYLL+LDRTNWKTN+LTSL
Sbjct: 16  MIGSDFNELTIAAKNLATHAFTLTGLGFGTSVLEWVASIAAIYLLVLDRTNWKTNMLTSL 75

Query: 78  LIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDWLELPGALILLIVVAPGL 137
           LIPYIFFSLP LIFG  RGE+GKWIA +AVV++LFFP+   ++LELP AL+LL VVAP L
Sbjct: 76  LIPYIFFSLPSLIFGIFRGEIGKWIAFVAVVVQLFFPKHAREYLELPVALVLLAVVAPNL 135

Query: 138 FASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGIVLLFVFPVWAL 197
            A T R   IG  ICL I CYLLQEHIRASGGFRN+FTKANGISNT+GI+ L VFPVWAL
Sbjct: 136 IAGTFRDSWIGLAICLGIGCYLLQEHIRASGGFRNAFTKANGISNTVGIICLVVFPVWAL 195

Query: 198 L 199
           +
Sbjct: 196 I 196

[Close]

BLAST of Carg22968 vs. Swiss-Prot
Match: sp|O23164|CRPM4_ARATH (Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=At4g37220 PE=2 SV=2)

HSP 1 Score: 246.5 bits (628), Expect = 2.5e-64
Identity = 118/201 (58.71%), Postives = 152/201 (75.62%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           M +  +L M T+ + ++LI+SD+ E   A KKL   V  L  VGFG + LQW AS  AIY
Sbjct: 1   MGRGEFLAMKTEENAANLINSDMNEFVAAAKKLVKDVGMLGGVGFGTSVLQWAASIFAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKT +LT+LL+PYIFF+LP +IF F  G+ GKWIA IA+++RLFFP+ FP+W
Sbjct: 61  LLILDRTNWKTKMLTTLLVPYIFFTLPSVIFQFFSGDFGKWIALIAIIVRLFFPKEFPEW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL++VV+P L A T+R   +G VICL+I+CYL  EHI+ASGGF+NSFT+ NGI
Sbjct: 121 LEIPVALILIVVVSPSLIAWTLRESWVGAVICLVIACYLFHEHIKASGGFKNSFTQKNGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRV 202
           SNTIGIV L V+PVW +   +
Sbjct: 181 SNTIGIVALLVYPVWTIFFHI 201

[Close]

BLAST of Carg22968 vs. Swiss-Prot
Match: sp|O64834|CRPM3_ARATH (Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=At2g23680 PE=2 SV=1)

HSP 1 Score: 144.1 bits (362), Expect = 1.8e-33
Identity = 74/150 (49.33%), Postives = 103/150 (68.67%), Query Frame = 0


Query: 49  FLQWIASFAAIYLLILDRTNWK--TNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIA 108
           FL+W+AS  A++L+ILD+T WK   NI+ SLL PY+F SLP +IF  LR  VGKWIA + 
Sbjct: 30  FLRWLASIVAVFLMILDQTKWKYSNNIMASLLAPYLFSSLPIVIFQVLRNGVGKWIALLT 89

Query: 109 VVLRLFFPRRFPDWLELPGALILLIVVAPGLFASTIRGDA--IGEVICLIISCYLLQEHI 168
           V+LRLF P  F + LE+PGA ILLIVV P    +  R D    G  +CL+ S YL+ +H 
Sbjct: 90  VILRLFLPNHFHESLEIPGATILLIVVTPSDIGAIFRDDLRYTGGDVCLLTSFYLINKHT 149

Query: 169 RASGGFRNSFTKANGISNTIGIVLLFVFPV 195
           +A GG +NSFT+ + ++ +I + +LFV+P+
Sbjct: 150 KACGGIKNSFTQKDKVTYSICLWILFVYPI 179

[Close]

BLAST of Carg22968 vs. Swiss-Prot
Match: sp|Q94AL8|CRIM1_ARATH (Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=COR413IM1 PE=1 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 1.3e-12
Identity = 55/192 (28.65%), Postives = 97/192 (50.52%), Query Frame = 0


Query: 7   LKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIYLLILDR 66
           L++  D   +  +S+ + + R  G  +  +   +S     A  LQWI++ + + L++   
Sbjct: 47  LRLSGDRQRTATVSTRVEKRRKRGSSVVCYAAPIS-----ANSLQWISTISCLALMLAR- 106

Query: 67  TNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDWLELPGA 126
               T I  S+++P      P  I  +++GE G W A +A++ RLFF   FP  LELP  
Sbjct: 107 ---GTGIHKSVVVPLFALHAPSSIVAWIKGEYGVWAAFLALIARLFF--TFPGELELPFI 166

Query: 127 LILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGISNTIGI 186
            +LL++VAP      IRG   G +I + IS +L  +H   +G    ++ K + ++ T+ I
Sbjct: 167 ALLLVIVAP-YQVMNIRGKQEGAIIAIAISGFLAFQHFSRAGSLEKAYEKGSVLA-TVAI 225

Query: 187 VLLFVFPVWALL 199
           + + V  +  LL
Sbjct: 227 IGVTVVSLLLLL 225

[Close]

BLAST of Carg22968 vs. TrEMBL
Match: tr|A0A1S3CAX8|A0A1S3CAX8_CUCME (cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC103498423 PE=4 SV=1)

HSP 1 Score: 356.3 bits (913), Expect = 4.5e-95
Identity = 181/202 (89.60%), Postives = 190/202 (94.06%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKP++LKM+TDSD +DLISSDLREL NA +KLATH VKL A GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGE GKW+A IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAP LFASTIR DAIGE ICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFASTIRNDAIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGI+LLFVFPVWAL+LRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Carg22968 vs. TrEMBL
Match: tr|A0A0A0LIW2|A0A0A0LIW2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=4 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 3.3e-93
Identity = 177/202 (87.62%), Postives = 187/202 (92.57%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           MVKP++LKM+TDSD +DLISSDLREL NA +KLATH VKL A GF A+FLQWIASFAAIY
Sbjct: 1   MVKPNHLKMVTDSDAADLISSDLRELGNAARKLATHAVKLGASGFTASFLQWIASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILTSLLIPYIFFSLPG+IFGF RGE GKW+A IAVVLRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGVIFGFFRGEFGKWVAVIAVVLRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILLIVVAP LFA TIR D IGE ICLIISCYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLIVVAPSLFAKTIRNDPIGEAICLIISCYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SNTIGI+LLFVFPVWAL+LRVL
Sbjct: 181 SNTIGIILLFVFPVWALVLRVL 202

[Close]

BLAST of Carg22968 vs. TrEMBL
Match: tr|D7TPV7|D7TPV7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0063g01870 PE=4 SV=1)

HSP 1 Score: 310.1 bits (793), Expect = 3.7e-81
Identity = 153/202 (75.74%), Postives = 175/202 (86.63%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           M K  YL M TD+D +DLISSDLR+L NA KKLATH +KL  +GFG TFL+W+ASFAAIY
Sbjct: 1   MGKKGYLAMRTDTDTTDLISSDLRDLGNAAKKLATHAIKLGGLGFGTTFLEWLASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILT+LLIPYIFFSLP ++F F  G+VGKWIA IAVVLRLFFP+RFPDW
Sbjct: 61  LLILDRTNWKTNILTALLIPYIFFSLPSILFNFFSGQVGKWIAFIAVVLRLFFPKRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LE+P ALIL+IVVAP LF+STIRGD IG VICL I CYLLQEHIRASGGFRNSFT+ +GI
Sbjct: 121 LEMPAALILVIVVAPSLFSSTIRGDWIGLVICLAIGCYLLQEHIRASGGFRNSFTQRHGI 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SN+IG++LL V+PVWAL+L  L
Sbjct: 181 SNSIGLILLLVYPVWALVLHFL 202

[Close]

BLAST of Carg22968 vs. TrEMBL
Match: tr|A0A1R3HY71|A0A1R3HY71_COCAP (Cold-regulated plasma membrane OS=Corchorus capsularis OX=210143 GN=CCACVL1_16253 PE=4 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 2.4e-80
Identity = 151/202 (74.75%), Postives = 173/202 (85.64%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           M K SYL M T  D SDLISSD +EL  A KKLA H +KL ++GFG +FL+W+ASFAAIY
Sbjct: 1   MGKQSYLAMRTQQDTSDLISSDFKELTFAAKKLANHAIKLGSLGFGTSFLEWVASFAAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LLILDRTNWKTNILT LLIPYIFFSLP ++F   RGEVGKWIA +AV+LRLFFPRRFPDW
Sbjct: 61  LLILDRTNWKTNILTGLLIPYIFFSLPSILFNLFRGEVGKWIAIVAVILRLFFPRRFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELP ALILLIVVAPGL ASTIR + IG VICLII+CYLLQEHIRASGGFRNSFTKA+G+
Sbjct: 121 LELPAALILLIVVAPGLLASTIRSNWIGVVICLIIACYLLQEHIRASGGFRNSFTKAHGL 180

Query: 181 SNTIGIVLLFVFPVWALLLRVL 203
           SN++GI++L V+P WALL+ +L
Sbjct: 181 SNSVGIIILLVYPAWALLVELL 202

[Close]

BLAST of Carg22968 vs. TrEMBL
Match: tr|E1AWE4|E1AWE4_9ROSI (COR413-PM1 OS=Corylus heterophylla OX=80754 PE=2 SV=1)

HSP 1 Score: 305.4 bits (781), Expect = 9.2e-80
Identity = 149/199 (74.87%), Postives = 171/199 (85.93%), Query Frame = 0


Query: 1   MVKPSYLKMLTDSDVSDLISSDLRELRNAGKKLATHVVKLSAVGFGATFLQWIASFAAIY 60
           M K SY++M TD D + LISSDL+EL NA KKLATHV  L+++GFG TFLQW+ASF+AIY
Sbjct: 1   MGKESYIRMKTDQDTNQLISSDLKELGNAAKKLATHVGNLTSLGFGTTFLQWVASFSAIY 60

Query: 61  LLILDRTNWKTNILTSLLIPYIFFSLPGLIFGFLRGEVGKWIAAIAVVLRLFFPRRFPDW 120
           LL+LDRT+WKTNILTSLLIPYIFFS P L+F   RGE+GKWIA +AVVLRLF PR FPDW
Sbjct: 61  LLVLDRTHWKTNILTSLLIPYIFFSFPSLLFNIFRGEIGKWIAFVAVVLRLFLPRHFPDW 120

Query: 121 LELPGALILLIVVAPGLFASTIRGDAIGEVICLIISCYLLQEHIRASGGFRNSFTKANGI 180
           LELPGALILL+VVAP L A T+R D IG  IC +I+CYLLQEHIRASGGFRNSFTKANGI
Sbjct: 121 LELPGALILLMVVAPSLLADTVRDDWIGVAICPVIACYLLQEHIRASGGFRNSFTKANGI 180

Query: 181 SNTIGIVLLFVFPVWALLL 200
           SNT+GI+LL V+PVWAL+L
Sbjct: 181 SNTVGIILLLVYPVWALVL 199

The following BLAST results are available for this feature:

BLAST of Carg22968 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023532118.1	2.5e-105	100.00	cold-regulated 413 plasma membrane protein 2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022948197.1	1.6e-104	99.50	cold-regulated 413 plasma membrane protein 2-like [Cucurbita moschata]	[more]
XP_023007529.1	2.1e-104	99.01	cold-regulated 413 plasma membrane protein 2-like [Cucurbita maxima]	[more]
XP_008459238.1	6.9e-95	89.60	PREDICTED: cold-regulated 413 plasma membrane protein 2-like [Cucumis melo]	[more]
XP_023512618.1	3.4e-94	89.11	cold-regulated 413 plasma membrane protein 2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22968 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G50830.1	2.2e-71	66.50	cold-regulated 413-plasma membrane 2	[more]
AT2G15970.1	2.5e-67	69.06	cold regulated 413 plasma membrane 1	[more]
AT4G37220.1	1.4e-65	58.71	Cold acclimation protein WCOR413 family	[more]
AT2G23680.1	9.7e-35	49.33	Cold acclimation protein WCOR413 family	[more]
AT1G29395.1	7.2e-14	28.65	COLD REGULATED 314 INNER MEMBRANE 1	[more]

BLAST of Carg22968 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVL6\|CRPM2_ARATH	4.0e-70	66.50	Cold-regulated 413 plasma membrane protein 2 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q9XIM7\|CRPM1_ARATH	4.6e-66	69.06	Cold-regulated 413 plasma membrane protein 1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|O23164\|CRPM4_ARATH	2.5e-64	58.71	Cold-regulated 413 plasma membrane protein 4 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|O64834\|CRPM3_ARATH	1.8e-33	49.33	Cold-regulated 413 plasma membrane protein 3 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
sp\|Q94AL8\|CRIM1_ARATH	1.3e-12	28.65	Cold-regulated 413 inner membrane protein 1, chloroplastic OS=Arabidopsis thalia...	[more]

BLAST of Carg22968 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CAX8\|A0A1S3CAX8_CUCME	4.5e-95	89.60	cold-regulated 413 plasma membrane protein 2-like OS=Cucumis melo OX=3656 GN=LOC...	[more]
tr\|A0A0A0LIW2\|A0A0A0LIW2_CUCSA	3.3e-93	87.62	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G238250 PE=4 SV=1	[more]
tr\|D7TPV7\|D7TPV7_VITVI	3.7e-81	75.74	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0063g01870 PE=4 SV=...	[more]
tr\|A0A1R3HY71\|A0A1R3HY71_COCAP	2.4e-80	74.75	Cold-regulated plasma membrane OS=Corchorus capsularis OX=210143 GN=CCACVL1_1625...	[more]
tr\|E1AWE4\|E1AWE4_9ROSI	9.2e-80	74.87	COR413-PM1 OS=Corylus heterophylla OX=80754 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **INTERPRO**
Term	Definition
IPR008892	COR413

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22968-RA	Carg22968-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008892	Cold-regulated 413 protein	PFAM	PF05562	WCOR413	coord: 9..189 e-value: 7.9E-87 score: 289.8
IPR008892	Cold-regulated 413 protein	PANTHER	PTHR33596	FAMILY NOT NAMED	coord: 1..201
None	No IPR available	PANTHER	PTHR33596:SF1	SUBFAMILY NOT NAMED	coord: 1..201

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22968	Cla010287	Watermelon (97103) v1	carwmB0893
Carg22968	Cla001791	Watermelon (97103) v1	carwmB0894
Carg22968	Csa2G238250	Cucumber (Chinese Long) v2	carcuB0906
Carg22968	Csa6G488350	Cucumber (Chinese Long) v2	carcuB0907
Carg22968	MELO3C007508	Melon (DHL92) v3.5.1	carmeB0881
Carg22968	MELO3C021940	Melon (DHL92) v3.5.1	carmeB0877
Carg22968	ClCG01G016380	Watermelon (Charleston Gray)	carwcgB0867
Carg22968	ClCG09G017740	Watermelon (Charleston Gray)	carwcgB0865
Carg22968	CSPI06G27540	Wild cucumber (PI 183967)	carcpiB0927
Carg22968	CSPI02G11830	Wild cucumber (PI 183967)	carcpiB0926
Carg22968	Cucsa.109950	Cucumber (Gy14) v1	carcgyB1012
Carg22968	Cucsa.101910	Cucumber (Gy14) v1	carcgyB1011
Carg22968	CmaCh02G004260	Cucurbita maxima (Rimu)	carcmaB1233
Carg22968	CmaCh20G008780	Cucurbita maxima (Rimu)	carcmaB1232
Carg22968	CmoCh02G004270	Cucurbita moschata (Rifu)	carcmoB1204
Carg22968	CmoCh20G008850	Cucurbita moschata (Rifu)	carcmoB1203
Carg22968	Lsi01G010360	Bottle gourd (USVL1VR-Ls)	carlsiB810
Carg22968	Lsi10G003300	Bottle gourd (USVL1VR-Ls)	carlsiB808
Carg22968	Cp4.1LG05g12210	Cucurbita pepo (Zucchini)	carcpeB1243
Carg22968	Cp4.1LG16g02170	Cucurbita pepo (Zucchini)	carcpeB1242
Carg22968	CsGy2G011860	Cucumber (Gy14) v2	carcgybB0879
Carg22968	MELO3C007508.2	Melon (DHL92) v3.6.1	carmedB0889
Carg22968	MELO3C021940.2	Melon (DHL92) v3.6.1	carmedB0885
Carg22968	CsaV3_2G014340	Cucumber (Chinese Long) v3	carcucB0929
Carg22968	CsaV3_6G042690	Cucumber (Chinese Long) v3	carcucB0930
Carg22968	Cla97C09G179140	Watermelon (97103) v2	carwmbB0931
Carg22968	Bhi10G001668	Wax gourd	carwgoB1037

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22968	Carg23626	Silver-seed gourd	carcarB619

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22968	Cucurbita pepo (Zucchini)	carcpeB1241
Carg22968	Bottle gourd (USVL1VR-Ls)	carlsiB809
Carg22968	Watermelon (Charleston Gray)	carwcgB0868
Carg22968	Watermelon (97103) v1	carwmB0895
Carg22968	Watermelon (97103) v2	carwmbB0930
Carg22968	Wax gourd	carwgoB1036