Carg22934 (gene) Silver-seed gourd

NameCarg22934
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_124 : 437407 .. 439971 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATTGCTAGGGATGTTGAAGGGTGAGATTGGGTTGGAAATGTCTTTTTTACCCCTTGGGCTCATTTTAACTTCGTTGACTTTTAGGTCAATTCCAATAATATATTTTATATTTTATTTTTTATTTGTAATCTTCCTTTAAAATATACTTTAATTACTATTGAAATATACTCAAGTGGATCGTAATTATTTAATTATATTAATGCCTCTATAATTTTATAATTATATTTATGTAGTTAATAAATTTTTTAGAAAATTAATTATAGGTCAATTAAACGATGGGCATGGAGTATTTCAAGAGAGTCTGAGTCAATAGTACAAAATAAGAGCACGTAAATCATAAAATTTGATAAGATGTTATGTCTCCGCTCGAGTAAAAGTGTTATGTTATCAATTCTCATTAAAACTCGAAGTTAAGAAGACAAAGATAGTTTGAAGTTCGAATCTCCTTACTCTCGAATGTTGTTGAAAAAAAAGATTAATTTAATTTTGTTGCACCGTAATTTATTAAATTACCATAGATTAATTTATAAGTGATTTCTTGTCAAATCACTTTAGAATCAAATCAGAGATAATCAACTTTAGATTGATTATTTACAAAAGAAAATAAAAAATAAAAATAATAACAATAATGATTATAAACCAATATGATTAGTCTAAAAATGATTATTATTTATTTACTTTTTCATCTGTGTATAATTAGAATATAATTAACACAAAAAAAACAAAATTGAAAATTTTGAAATAATAAAATATATTAAGCCTAAAAGTTAAATGAGAAATAATTACTTAAATTTAGAATTAAATTTATAATTTAACAAAAAAAAAAATCAATTTCGTATTTATTATTATTCTAATAAATTATTATTTCTAAATTTTACAATATTAAATTAAAGAAAAAAAATGGAAAAAAGAGATAAGAAAAAAAAAAAAAAAAAGCGCTATCAGTATTTATTATTCATTTTGTCAGCTTTCCCACGCTTTTCTTTCCGTTTCGCTCCAACAGGCTCCCCGCAGATCCAACGGTCACCGACAGCCATATTTGGAAACAACGCTGCCACGTGGCGTCATATCTGCCCATCTGGCCTCTTAATTTTTCTTTTTTTTTTCATCACGTGGCTTAGCTTTAAAATTCGAGAGGGTATTTTAGTCATTTTACATTAAATAAACATGATTTTAATTCTATAAAGAATTAAATTTCCGGAGCTAAAAAATAATATATGTTAATTAATATTTAATTATTTTACGATTAAATATTTTTTGAAATGAAATAAAGGGTGAGAATAATTTTAATTTAATTTTTTATGTAATTTATTTAAATGAAAAAAGGAATAGAAATGAAAAATTTTAAATTAGTGGGATAATTGAAATTTACGGAGTTATTGACATAGCAAAAAGATGCCGAGGGTAATTTGGTCATTTCACTTTACTACTTTTTTTTTTTTTTTTTTTTTTTCTTTCCCGGTGGAGAGAGGTTCGGTTGGAGGAGAAATTTCAACTTTGTTGACGTTCCCATCGGGTTCTCATTTGCTTCAACCGGCCATTGGTTCATCACAAATTTCTCTCCTCCCCGAGACTAAGACTGCCGGCGACCGGTGCTGAATCCGCGCCGCTGCAGCCACCGCATTTGCTTCTACTTTTTTCACGTCATACGGCTGTGGCCGGTGCTGATTCGCCGGTGTTGTGTTACTGTTTCATCTACTTCCGTTCTTCTCCATTGATTTCCACCTTTCTATGTCCGGTACATTCACTTTCACCTGCTTGCTTTTTTGTTTGTTTTTTTTAAGCCTTGTCTCTCTAATTGGCACGCGGACGCTTTATTCCACTCGTAAAGCCTCCTCGTCTTCGCTAATTTACTCTGGAGCTGCGCCTTGATTCATTTTCTCTAATTGTAGTTTATGTAATCATTTCTGCGTAGCTGATTTTTTTTTCAACTTGAAGGAATCCTTGGATTATTGTTGCTTAGCTGATCGTCATCTCGGAGGAATCCGCGGGGTATTGTTTCTTTCTCGACGGTCTCGACGGTTTAATTGTCCAGTGGCTGCTCATAATTTGATTCTTGTGAGGTTTTCGTTGGAAATTGCTGCATTAGAAGTTTGCTTTGAGTCGAAGTAAAACGATGAGTTCCAGAGTGTAATTATTTTGGAGATAAGATTTTAATATTCTTACTTAACTGGAGATTTGTTGAAGACGAGCCAACCGTTAAAATTGTATAAGAACGCCGTTGCGTAAAACTTCCTAACCGATGGTTGCATTCTGATACGCACATTGTGCGGATTTTTTCAGTTTTGGAACGATTACTTAATAGATTCTGGTTGTTTTCTTAAAGTACACGAGGCTTGAAGACGACGAAAAGCGCAGCAGAGTAGCAGAGGCTTCGGATCAGACCGAGGCCGCAAAGAAAAGAAGAAAGGAAAAGGGGAATTTAAAAAACGACGGTGTCTGGAGGATCGCATCCATTTCTGGAGCAAGTAGGCCATTGCGTTCGATTGCTGAAACGCGTCGCTGAACCGAATGGCATCATTTTGGGCGACAGTTTTCTGAAAGGACAGACGATTCGACAGT

mRNA sequence

ATGATTGCTAGGGATGTTGAAGGACTAAGACTGCCGGCGACCGGTGCTGAATCCGCGCCGCTGCAGCCACCGCATTTGCTTCTACTTTTTTCACGTCATACGGCTGTGGCCGGTGCTGATTCGCCGGTGTTGTGTTACTGTTTCATCTACTTCCGTTCTTCTCCATTGATTTCCACCTTTCTATGTCCGGAATCCTTGGATTATTGTTGCTTAGCTGATCGTCATCTCGGAGGAATCCGCGGGGTATTGTTTCTTTCTCGACGGTCTCGACGGTTTAATTGTCCAGTGGCTGCTCATAATTTGATTCTTGTGAGGTTTTCGTTGGAAATTGCTGCATTAGAATACACGAGGCTTGAAGACGACGAAAAGCGCAGCAGAGTAGCAGAGGCTTCGGATCAGACCGAGGCCGCAAAGAAAAGAAGAAAGGAAAAGGGGAATTTAAAAAACGACGGTGTCTGGAGGATCGCATCCATTTCTGGAGCAAGTAGGCCATTGCGTTCGATTGCTGAAACGCGTCGCTGAACCGAATGGCATCATTTTGGGCGACAGTTTTCTGAAAGGACAGACGATTCGACAGT

Coding sequence (CDS)

ATGATTGCTAGGGATGTTGAAGGACTAAGACTGCCGGCGACCGGTGCTGAATCCGCGCCGCTGCAGCCACCGCATTTGCTTCTACTTTTTTCACGTCATACGGCTGTGGCCGGTGCTGATTCGCCGGTGTTGTGTTACTGTTTCATCTACTTCCGTTCTTCTCCATTGATTTCCACCTTTCTATGTCCGGAATCCTTGGATTATTGTTGCTTAGCTGATCGTCATCTCGGAGGAATCCGCGGGGTATTGTTTCTTTCTCGACGGTCTCGACGGTTTAATTGTCCAGTGGCTGCTCATAATTTGATTCTTGTGAGGTTTTCGTTGGAAATTGCTGCATTAGAATACACGAGGCTTGAAGACGACGAAAAGCGCAGCAGAGTAGCAGAGGCTTCGGATCAGACCGAGGCCGCAAAGAAAAGAAGAAAGGAAAAGGGGAATTTAAAAAACGACGGTGTCTGGAGGATCGCATCCATTTCTGGAGCAAGTAGGCCATTGCGTTCGATTGCTGAAACGCGTCGCTGA

Protein sequence

MIARDVEGLRLPATGAESAPLQPPHLLLLFSRHTAVAGADSPVLCYCFIYFRSSPLISTFLCPESLDYCCLADRHLGGIRGVLFLSRRSRRFNCPVAAHNLILVRFSLEIAALEYTRLEDDEKRSRVAEASDQTEAAKKRRKEKGNLKNDGVWRIASISGASRPLRSIAETRR
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22934-RACarg22934-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..145

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg22934CmaCh11G010740Cucurbita maxima (Rimu)carcmaB0291
Carg22934CmoCh11G010970Cucurbita moschata (Rifu)carcmoB0297
The following gene(s) are paralogous to this gene:

None