Carg22763 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGACGCTTATGGATTCCTCCTCCTCCAGAAGACACTTCCACTGGACCCAGAAGGTGGGAAGTGAAGAAGAAGATGACCAATACCCACTTCCAACCCTCAAACCTACCTCCGTGGCCGCCGAGCTGGAAGAGATGAAGAAGAAAAACAGAGTCGTCTCTCCAGAGCCGCAGCCACCGCATCCCGCAGCCCAAGTACAAAGAAGGAAGATGCCGGCCGTTGCAGTTGCTCGGTTGCGTTCGGTTCTCACAGTTTTTGCCAAAAATCGGTCTACCCTTTCACCGGGTCTGGGTTCTCGGGTCGTCGGAACCCTTTTCGGATCTCGGCGTGGGCATGTGCACTTTGCATTCCAAAGAGACCCCAGCTCCGAACCTGCCTTCTTGGTAGAGCTTGCGACGCCTATTAGTGGCTTGGTAAAAGAAATGGCGTCTGTTGATCTAGTCCGAACTTGTACATTGAATGTGGATAAAGAAGGAAAAGAGGGGCAGAGGAACACCATAAGGAGCTGTGAAGACATATTATGCACAGAAGGCCGGCTTTGTGGAGGACATTGCTACACGATGCAATGTGGGATTAAAGAAGAAGCGGTTTTTGCGGAACGATGGAAAGGCATCTGTGGACGCGACCTAACGACAAGAACTGACAACTAG ATGAAGACGCTTATGGATTCCTCCTCCTCCAGAAGACACTTCCACTGGACCCAGAAGGTGGGAAGTGAAGAAGAAGATGACCAATACCCACTTCCAACCCTCAAACCTACCTCCGTGGCCGCCGAGCTGGAAGAGATGAAGAAGAAAAACAGAGTCGTCTCTCCAGAGCCGCAGCCACCGCATCCCGCAGCCCAAGTACAAAGAAGGAAGATGCCGGCCGTTGCAGTTGCTCGGTTGCGTTCGGTTCTCACAGTTTTTGCCAAAAATCGGTCTACCCTTTCACCGGGTCTGGGTTCTCGGGTCGTCGGAACCCTTTTCGGATCTCGGCGTGGGCATGTGCACTTTGCATTCCAAAGAGACCCCAGCTCCGAACCTGCCTTCTTGGTAGAGCTTGCGACGCCTATTAGTGGCTTGGTAAAAGAAATGGCGTCTGTTGATCTAGTCCGAACTTGTACATTGAATGTGGATAAAGAAGGAAAAGAGGGGCAGAGGAACACCATAAGGAGCTGTGAAGACATATTATGCACAGAAGGCCGGCTTTGTGGAGGACATTGCTACACGATGCAATGTGGGATTAAAGAAGAAGCGGTTTTTGCGGAACGATGGAAAGGCATCTGTGGACGCGACCTAACGACAAGAACTGACAACTAG ATGAAGACGCTTATGGATTCCTCCTCCTCCAGAAGACACTTCCACTGGACCCAGAAGGTGGGAAGTGAAGAAGAAGATGACCAATACCCACTTCCAACCCTCAAACCTACCTCCGTGGCCGCCGAGCTGGAAGAGATGAAGAAGAAAAACAGAGTCGTCTCTCCAGAGCCGCAGCCACCGCATCCCGCAGCCCAAGTACAAAGAAGGAAGATGCCGGCCGTTGCAGTTGCTCGGTTGCGTTCGGTTCTCACAGTTTTTGCCAAAAATCGGTCTACCCTTTCACCGGGTCTGGGTTCTCGGGTCGTCGGAACCCTTTTCGGATCTCGGCGTGGGCATGTGCACTTTGCATTCCAAAGAGACCCCAGCTCCGAACCTGCCTTCTTGGTAGAGCTTGCGACGCCTATTAGTGGCTTGGTAAAAGAAATGGCGTCTGTTGATCTAGTCCGAACTTGTACATTGAATGTGGATAAAGAAGGAAAAGAGGGGCAGAGGAACACCATAAGGAGCTGTGAAGACATATTATGCACAGAAGGCCGGCTTTGTGGAGGACATTGCTACACGATGCAATGTGGGATTAAAGAAGAAGCGGTTTTTGCGGAACGATGGAAAGGCATCTGTGGACGCGACCTAACGACAAGAACTGACAACTAG MKTLMDSSSSRRHFHWTQKVGSEEEDDQYPLPTLKPTSVAAELEEMKKKNRVVSPEPQPPHPAAQVQRRKMPAVAVARLRSVLTVFAKNRSTLSPGLGSRVVGTLFGSRRGHVHFAFQRDPSSEPAFLVELATPISGLVKEMASVDLVRTCTLNVDKEGKEGQRNTIRSCEDILCTEGRLCGGHCYTMQCGIKEEAVFAERWKGICGRDLTTRTDN
BLAST of Carg22763 vs. NCBI nr
Match: XP_022955281.1 (protein MIZU-KUSSEI 1-like [Cucurbita moschata]) HSP 1 Score: 291.2 bits (744), Expect = 2.9e-75 Identity = 163/198 (82.32%), Postives = 167/198 (84.34%), Query Frame = 0
BLAST of Carg22763 vs. NCBI nr
Match: XP_022994145.1 (protein MIZU-KUSSEI 1-like [Cucurbita maxima]) HSP 1 Score: 287.7 bits (735), Expect = 3.2e-74 Identity = 160/198 (80.81%), Postives = 166/198 (83.84%), Query Frame = 0
BLAST of Carg22763 vs. NCBI nr
Match: XP_023542470.1 (protein MIZU-KUSSEI 1-like [Cucurbita pepo subsp. pepo] >XP_023542471.1 protein MIZU-KUSSEI 1-like [Cucurbita pepo subsp. pepo] >XP_023542472.1 protein MIZU-KUSSEI 1-like [Cucurbita pepo subsp. pepo] >XP_023542473.1 protein MIZU-KUSSEI 1-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 283.9 bits (725), Expect = 4.6e-73 Identity = 161/199 (80.90%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of Carg22763 vs. NCBI nr
Match: XP_004137460.1 (PREDICTED: protein MIZU-KUSSEI 1-like [Cucumis sativus] >KGN64097.1 hypothetical protein Csa_1G042090 [Cucumis sativus]) HSP 1 Score: 266.5 bits (680), Expect = 7.7e-68 Identity = 152/200 (76.00%), Postives = 162/200 (81.00%), Query Frame = 0
BLAST of Carg22763 vs. NCBI nr
Match: XP_023001676.1 (protein MIZU-KUSSEI 1-like [Cucurbita maxima]) HSP 1 Score: 223.8 bits (569), Expect = 5.7e-55 Identity = 136/196 (69.39%), Postives = 146/196 (74.49%), Query Frame = 0
BLAST of Carg22763 vs. TAIR10
Match: AT5G23100.1 (Protein of unknown function, DUF617) HSP 1 Score: 106.7 bits (265), Expect = 1.8e-23 Identity = 72/152 (47.37%), Postives = 89/152 (58.55%), Query Frame = 0
BLAST of Carg22763 vs. TAIR10
Match: AT3G25640.1 (Protein of unknown function, DUF617) HSP 1 Score: 73.9 bits (180), Expect = 1.3e-13 Identity = 48/103 (46.60%), Postives = 61/103 (59.22%), Query Frame = 0
BLAST of Carg22763 vs. TAIR10
Match: AT2G41660.1 (Protein of unknown function, DUF617) HSP 1 Score: 57.8 bits (138), Expect = 9.8e-09 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Carg22763 vs. TAIR10
Match: AT1G76610.1 (Protein of unknown function, DUF617) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 28/61 (45.90%), Postives = 33/61 (54.10%), Query Frame = 0
BLAST of Carg22763 vs. TAIR10
Match: AT4G39610.1 (Protein of unknown function, DUF617) HSP 1 Score: 47.8 bits (112), Expect = 1.0e-05 Identity = 30/82 (36.59%), Postives = 44/82 (53.66%), Query Frame = 0
BLAST of Carg22763 vs. Swiss-Prot
Match: sp|O22227|MIZ1_ARATH (Protein MIZU-KUSSEI 1 OS=Arabidopsis thaliana OX=3702 GN=MIZ1 PE=1 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 1.8e-07 Identity = 37/89 (41.57%), Postives = 50/89 (56.18%), Query Frame = 0
BLAST of Carg22763 vs. TrEMBL
Match: tr|A0A0A0LTL2|A0A0A0LTL2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042090 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 5.1e-68 Identity = 152/200 (76.00%), Postives = 162/200 (81.00%), Query Frame = 0
BLAST of Carg22763 vs. TrEMBL
Match: tr|A0A1S4E456|A0A1S4E456_CUCME (protein MIZU-KUSSEI 1-like OS=Cucumis melo OX=3656 GN=LOC103495630 PE=4 SV=1) HSP 1 Score: 185.3 bits (469), Expect = 1.5e-43 Identity = 110/154 (71.43%), Postives = 119/154 (77.27%), Query Frame = 0
BLAST of Carg22763 vs. TrEMBL
Match: tr|A0A2C9WIG4|A0A2C9WIG4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G022000 PE=4 SV=1) HSP 1 Score: 166.8 bits (421), Expect = 5.5e-38 Identity = 102/192 (53.12%), Postives = 128/192 (66.67%), Query Frame = 0
BLAST of Carg22763 vs. TrEMBL
Match: tr|A0A0S3RH17|A0A0S3RH17_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.02G273100 PE=4 SV=1) HSP 1 Score: 164.9 bits (416), Expect = 2.1e-37 Identity = 106/202 (52.48%), Postives = 134/202 (66.34%), Query Frame = 0
BLAST of Carg22763 vs. TrEMBL
Match: tr|A0A1S3TJS2|A0A1S3TJS2_VIGRR (protein MIZU-KUSSEI 1-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106756200 PE=4 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 2.7e-37 Identity = 109/203 (53.69%), Postives = 138/203 (67.98%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |