Carg22760 (gene) Silver-seed gourd

NameCarg22760
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_224 : 128539 .. 128872 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAATCCTCAGCAAGACTTGGGCAAATAGGCGAATCAACCAAACAGCTCCGAATTTGAATCCAATTCTCATCATTGACGACGTGGTTCTGAAGCCAATGCGAGTAATCCCCGAGCTTGTATTCCTTGAACCCCGTTCCAGACACGACCCGTCCAATTCCTCTATTGGTGACCAACAACGTGAAGATCGTAAACGCCATTAGCCCTAAAATCAGCAAGAACATCACGATCAGGTATAGAAACAGGATCGAGTTGAGGCGGCAGCAGGATCCAATCAGGCCGAACAACGAAACGATGATGAAGAAGATTCCTACGATTAGAGCAGGGTCCTGA

mRNA sequence

ATGATAATCCTCAGCAAGACTTGGGCAAATAGGCGAATCAACCAAACAGCTCCGAATTTGAATCCAATTCTCATCATTGACGACGTGGTTCTGAAGCCAATGCGAGTAATCCCCGAGCTTGTATTCCTTGAACCCCACACGACCCGTCCAATTCCTCTATTGGTGACCAACAACGTGAAGATCGTAAACGCCATTAGCCCTAAAATCAGCAAGAACATCACGATCAGGTATAGAAACAGGATCGAGTTGAGGCGGCAGCAGGATCCAATCAGGCCGAACAACGAAACGATGATGAAGAAGATTCCTACGATTAGAGCAGGGTCCTGA

Coding sequence (CDS)

ATGATAATCCTCAGCAAGACTTGGGCAAATAGGCGAATCAACCAAACAGCTCCGAATTTGAATCCAATTCTCATCATTGACGACGTGGTTCTGAAGCCAATGCGAGTAATCCCCGAGCTTGTATTCCTTGAACCCCACACGACCCGTCCAATTCCTCTATTGGTGACCAACAACGTGAAGATCGTAAACGCCATTAGCCCTAAAATCAGCAAGAACATCACGATCAGGTATAGAAACAGGATCGAGTTGAGGCGGCAGCAGGATCCAATCAGGCCGAACAACGAAACGATGATGAAGAAGATTCCTACGATTAGAGCAGGGTCCTGA

Protein sequence

MIILSKTWANRRINQTAPNLNPILIIDDVVLKPMRVIPELVFLEPHTTRPIPLLVTNNVKIVNAISPKISKNITIRYRNRIELRRQQDPIRPNNETMMKKIPTIRAGS
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22760-RACarg22760-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 86..108

The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg22760CmaCh18G000330Cucurbita maxima (Rimu)carcmaB0722
The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
Carg22760Wax gourdcarwgoB0623
Carg22760Silver-seed gourdcarcarB412
Carg22760Silver-seed gourdcarcarB413
Carg22760Silver-seed gourdcarcarB496
Carg22760Cucumber (Gy14) v2carcgybB0518
Carg22760Cucumber (Gy14) v2carcgybB0519
Carg22760Cucumber (Gy14) v1carcgyB0588
Carg22760Cucumber (Gy14) v1carcgyB0590
Carg22760Cucurbita maxima (Rimu)carcmaB0719
Carg22760Cucurbita maxima (Rimu)carcmaB0720
Carg22760Cucurbita maxima (Rimu)carcmaB0721
Carg22760Cucurbita moschata (Rifu)carcmoB0697
Carg22760Cucurbita moschata (Rifu)carcmoB0698
Carg22760Cucurbita moschata (Rifu)carcmoB0699
Carg22760Cucurbita pepo (Zucchini)carcpeB0722
Carg22760Cucurbita pepo (Zucchini)carcpeB0723
Carg22760Cucurbita pepo (Zucchini)carcpeB0725
Carg22760Cucurbita pepo (Zucchini)carcpeB0726
Carg22760Wild cucumber (PI 183967)carcpiB0548
Carg22760Wild cucumber (PI 183967)carcpiB0549
Carg22760Wild cucumber (PI 183967)carcpiB0550
Carg22760Cucumber (Chinese Long) v2carcuB0541
Carg22760Cucumber (Chinese Long) v2carcuB0542
Carg22760Cucumber (Chinese Long) v2carcuB0543
Carg22760Cucumber (Chinese Long) v3carcucB0547
Carg22760Cucumber (Chinese Long) v3carcucB0548
Carg22760Cucumber (Chinese Long) v3carcucB0549
Carg22760Bottle gourd (USVL1VR-Ls)carlsiB466
Carg22760Bottle gourd (USVL1VR-Ls)carlsiB467
Carg22760Bottle gourd (USVL1VR-Ls)carlsiB468
Carg22760Melon (DHL92) v3.5.1carmeB0516
Carg22760Melon (DHL92) v3.6.1carmedB0522
Carg22760Watermelon (Charleston Gray)carwcgB0498
Carg22760Watermelon (Charleston Gray)carwcgB0500
Carg22760Watermelon (97103) v1carwmB0509
Carg22760Watermelon (97103) v1carwmB0511
Carg22760Watermelon (97103) v2carwmbB0536
Carg22760Watermelon (97103) v2carwmbB0538