Carg22740 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAGAGAGATCCCGCACAAGCTTTTAATGTTCCCGTGTTTCCCATCGGACCATTGCTTGCTATCGCTCATCCCCTTGCATCCCGTCCTCCTTATCTCCTGTATTGGCTAAAGGATCAAATCTCTGTAGAAGACATGTTAGATCCCACCTTGCTCGAGAAGCTGGTGTTGAATGGCTTTGGTGAAATACTATTCCTTTTGTCCATGTTTCTGTGAACTCTACACTCCTTGTTCATAACATTGATGATATGTTTTTCAGAATCTGTGCCGGCAAAGGTTCTCCTGCAGCTATCATCAGTTTTCGAAGAGGGGGGCTTACGTGACAGGAACGGGACGTTCCAGTACAACGACCATCTACGCCAAACCAATGTTCCAATCCTTGCAATTGCTGGAGACCAAGATCCCATTTGTCCACCTGAAGCGGTATACGGTATGATATCTAAATATAATACCCGAGCGCCATGCCTTCCTCTCCGATTCTATTCATCACACCTCATTGACTCCAATCTTTTTCGACACTGATATCAGAAACTGTGAAAGGAATTCCCAGGGAGTTTGTTTCCTACAGAGTTCTTGGGAAGCCTGGTGGTCCTCATTATTCTCACTATGATCTTGTGGGAAGTCGTTTGGTATGGTTTTTCTCCTTCACAGGCACTTTTTAAGAACGACTTCGATTTACAAACTTCTCTAATTTCTAAATTCATCGTTATCGAACGCAGGCATCGAGTGAAGTGTATCCGTTGATAACTGATTTTCTCAACCGTCATGATGTGGCTTGA ATGCAGAGAGATCCCGCACAAGCTTTTAATGTTCCCGTGTTTCCCATCGGACCATTGCTTGCTATCGCTCATCCCCTTGCATCCCGTCCTCCTTATCTCCTGTATTGGCTAAAGGATCAAATCTCTGTAGAAGACATGTTAGATCCCACCTTGCTCGAGAAGCTGGTGTTGAATGGCTTTGAATCTGTGCCGGCAAAGGTTCTCCTGCAGCTATCATCAGTTTTCGAAGAGGGGGGCTTACGTGACAGGAACGGGACGTTCCAGTACAACGACCATCTACGCCAAACCAATGTTCCAATCCTTGCAATTGCTGGAGACCAAGATCCCATTTGTCCACCTGAAGCGGTATACGAAACTGTGAAAGGAATTCCCAGGGAGTTTGTTTCCTACAGAGTTCTTGGGAAGCCTGGTGGTCCTCATTATTCTCACTATGATCTTGTGGGAAGTCGTTTGGCATCGAGTGAAGTGTATCCGTTGATAACTGATTTTCTCAACCGTCATGATGTGGCTTGA ATGCAGAGAGATCCCGCACAAGCTTTTAATGTTCCCGTGTTTCCCATCGGACCATTGCTTGCTATCGCTCATCCCCTTGCATCCCGTCCTCCTTATCTCCTGTATTGGCTAAAGGATCAAATCTCTGTAGAAGACATGTTAGATCCCACCTTGCTCGAGAAGCTGGTGTTGAATGGCTTTGAATCTGTGCCGGCAAAGGTTCTCCTGCAGCTATCATCAGTTTTCGAAGAGGGGGGCTTACGTGACAGGAACGGGACGTTCCAGTACAACGACCATCTACGCCAAACCAATGTTCCAATCCTTGCAATTGCTGGAGACCAAGATCCCATTTGTCCACCTGAAGCGGTATACGAAACTGTGAAAGGAATTCCCAGGGAGTTTGTTTCCTACAGAGTTCTTGGGAAGCCTGGTGGTCCTCATTATTCTCACTATGATCTTGTGGGAAGTCGTTTGGCATCGAGTGAAGTGTATCCGTTGATAACTGATTTTCTCAACCGTCATGATGTGGCTTGA MQRDPAQAFNVPVFPIGPLLAIAHPLASRPPYLLYWLKDQISVEDMLDPTLLEKLVLNGFESVPAKVLLQLSSVFEEGGLRDRNGTFQYNDHLRQTNVPILAIAGDQDPICPPEAVYETVKGIPREFVSYRVLGKPGGPHYSHYDLVGSRLASSEVYPLITDFLNRHDVA
BLAST of Carg22740 vs. NCBI nr
Match: XP_022954910.1 (uncharacterized protein LOC111457026 isoform X1 [Cucurbita moschata]) HSP 1 Score: 348.6 bits (893), Expect = 1.2e-92 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg22740 vs. NCBI nr
Match: XP_022954911.1 (uncharacterized protein LOC111457026 isoform X2 [Cucurbita moschata]) HSP 1 Score: 348.6 bits (893), Expect = 1.2e-92 Identity = 168/168 (100.00%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg22740 vs. NCBI nr
Match: XP_022994270.1 (uncharacterized protein LOC111490055 isoform X1 [Cucurbita maxima]) HSP 1 Score: 347.4 bits (890), Expect = 2.7e-92 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg22740 vs. NCBI nr
Match: XP_022994272.1 (uncharacterized protein LOC111490055 isoform X2 [Cucurbita maxima]) HSP 1 Score: 347.4 bits (890), Expect = 2.7e-92 Identity = 167/168 (99.40%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg22740 vs. NCBI nr
Match: XP_023541739.1 (uncharacterized protein LOC111801808 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 345.5 bits (885), Expect = 1.0e-91 Identity = 167/168 (99.40%), Postives = 167/168 (99.40%), Query Frame = 0
BLAST of Carg22740 vs. TAIR10
Match: AT1G15060.1 (Uncharacterised conserved protein UCP031088, alpha/beta hydrolase) HSP 1 Score: 224.2 bits (570), Expect = 6.2e-59 Identity = 102/167 (61.08%), Postives = 132/167 (79.04%), Query Frame = 0
BLAST of Carg22740 vs. TAIR10
Match: AT1G73750.1 (Uncharacterised conserved protein UCP031088, alpha/beta hydrolase) HSP 1 Score: 216.5 bits (550), Expect = 1.3e-56 Identity = 98/166 (59.04%), Postives = 123/166 (74.10%), Query Frame = 0
BLAST of Carg22740 vs. TrEMBL
Match: tr|A0A0A0LVT9|A0A0A0LVT9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042610 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 2.0e-80 Identity = 145/167 (86.83%), Postives = 156/167 (93.41%), Query Frame = 0
BLAST of Carg22740 vs. TrEMBL
Match: tr|A0A1S3CGE4|A0A1S3CGE4_CUCME (uncharacterized protein LOC103500486 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103500486 PE=4 SV=1) HSP 1 Score: 300.1 bits (767), Expect = 3.3e-78 Identity = 141/167 (84.43%), Postives = 153/167 (91.62%), Query Frame = 0
BLAST of Carg22740 vs. TrEMBL
Match: tr|A0A1S3CGR6|A0A1S3CGR6_CUCME (uncharacterized protein LOC103500486 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500486 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.0e-68 Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of Carg22740 vs. TrEMBL
Match: tr|A0A1S3CG41|A0A1S3CG41_CUCME (uncharacterized protein LOC103500486 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500486 PE=4 SV=1) HSP 1 Score: 266.5 bits (680), Expect = 4.0e-68 Identity = 126/149 (84.56%), Postives = 136/149 (91.28%), Query Frame = 0
BLAST of Carg22740 vs. TrEMBL
Match: tr|A0A2I4FEZ2|A0A2I4FEZ2_9ROSI (uncharacterized protein LOC108998181 OS=Juglans regia OX=51240 GN=LOC108998181 PE=4 SV=1) HSP 1 Score: 250.0 bits (637), Expect = 3.9e-63 Identity = 115/165 (69.70%), Postives = 137/165 (83.03%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |