Carg22489 (gene) Silver-seed gourd

Overview
NameCarg22489
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionRING-H2 finger protein ATL11-like
LocationCucurbita_argyrosperma_scaffold_156 : 135241 .. 136383 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTCTCTCCCGCCCTCAATCATGTCGCCGCCGCCTTTCTCTTCTATTCTATCCTACTCGCCGACGTCTCCTCCCTCGCCGCCGCCCAATCCGGCCAACCCACCGTCCCTAGTCCCCCTGATTTATACCCTTTTAAACAGACCATCAGCAAACGAATGGCCATCGTTTTGATTGTTCTCGTCTGCTTCTTCATCGTCATCGCCGTTCTCTCTGTCTACACCCGTCAATGCACCGACCAACACTTCGGCGGCCGCCTCCTCCTCTCTACCGCCCAAACTGCCACCAACGCCCGATCCAGAACGGCTGCGCGTGGCCTTGACGCCGATGTTATAGCTACTTTCCCCACTTTTCTATACGCCAACGTGAAAGGGCTTAAAATCGGAAATGGGTCGTTGGAATGCGCCGTTTGTTTGTCCGAATTCGAAGATGATGCAACGCTCCGGTTGTTGCCGAAATGCAGCCATGTCTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGCCGCGCTAGCCTTGTCCCAAAACCCGGCGATGTATCCTTTGCTGCGTTGCTCAATTCCGATTTGGGAATTGACCGGAGCGGACCGGTGACCGGATCGGAAAGTGGTCAGGTAATTGTTCGAATTCCGGAGGGGAATCAAGGGCAGGAAGTGAGTTTGATAAACCCAAATGAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGACGGGATGGCGATTGAGCGGGCTGTTCCCACGGTCGCATTCGACGGGGCACTCGCTGATCGGAAGAGGGGAGGATTACGAGAGGTTTACGCTGAGATTGCCGGAGGAGGTACGAAGTGAGCTGTTGAATTGGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGAGCAGAGTTCGAGACAGGGGTACCGGAGTGAGGTGGGGAAGAATGGGTTTTCGGGGAATCGGAGTAGAAATGGGTGGGTGGAGTGGCGGCGGACATTGTTACCGGCGACGCCATTTCTTGGAAGGGAGGGTTCGAGAAAGGATGTGATTGTCAACGGAGATGGCAGTGGACGGCCGTTCTCCAGGTTGCCGGGTGATGTCGACGGGGAAGTCAAAGTCAACGATAACGTAGGCGGCTGA

mRNA sequence

ATGCTCTCTCCCGCCCTCAATCATGTCGCCGCCGCCTTTCTCTTCTATTCTATCCTACTCGCCGACGTCTCCTCCCTCGCCGCCGCCCAATCCGGCCAACCCACCGTCCCTAGTCCCCCTGATTTATACCCTTTTAAACAGACCATCAGCAAACGAATGGCCATCGTTTTGATTGTTCTCGTCTGCTTCTTCATCGTCATCGCCGTTCTCTCTGTCTACACCCGTCAATGCACCGACCAACACTTCGGCGGCCGCCTCCTCCTCTCTACCGCCCAAACTGCCACCAACGCCCGATCCAGAACGGCTGCGCGTGGCCTTGACGCCGATGTTATAGCTACTTTCCCCACTTTTCTATACGCCAACGTGAAAGGGCTTAAAATCGGAAATGGGTCGTTGGAATGCGCCGTTTGTTTGTCCGAATTCGAAGATGATGCAACGCTCCGGTTGTTGCCGAAATGCAGCCATGTCTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGCCGCGCTAGCCTTGTCCCAAAACCCGGCGATGTATCCTTTGCTGCGTTGCTCAATTCCGATTTGGGAATTGACCGGAGCGGACCGGTGACCGGATCGGAAAGTGGTCAGGTAATTGTTCGAATTCCGGAGGGGAATCAAGGGCAGGAAGTGAGTTTGATAAACCCAAATGAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGACGGGATGGCGATTGAGCGGGCTGTTCCCACGGTCGCATTCGACGGGGCACTCGCTGATCGGAAGAGGGGAGGATTACGAGAGGTTTACGCTGAGATTGCCGGAGGAGGTACGAAGTGAGCTGTTGAATTGGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGAGCAGAGTTCGAGACAGGGGTACCGGAGTGAGGTGGGGAAGAATGGGTTTTCGGGGAATCGGAGTAGAAATGGGTGGGTGGAGTGGCGGCGGACATTGTTACCGGCGACGCCATTTCTTGGAAGGGAGGGTTCGAGAAAGGATGTGATTGTCAACGGAGATGGCAGTGGACGGCCGTTCTCCAGGTTGCCGGGTGATGTCGACGGGGAAGTCAAAGTCAACGATAACGTAGGCGGCTGA

Coding sequence (CDS)

ATGCTCTCTCCCGCCCTCAATCATGTCGCCGCCGCCTTTCTCTTCTATTCTATCCTACTCGCCGACGTCTCCTCCCTCGCCGCCGCCCAATCCGGCCAACCCACCGTCCCTAGTCCCCCTGATTTATACCCTTTTAAACAGACCATCAGCAAACGAATGGCCATCGTTTTGATTGTTCTCGTCTGCTTCTTCATCGTCATCGCCGTTCTCTCTGTCTACACCCGTCAATGCACCGACCAACACTTCGGCGGCCGCCTCCTCCTCTCTACCGCCCAAACTGCCACCAACGCCCGATCCAGAACGGCTGCGCGTGGCCTTGACGCCGATGTTATAGCTACTTTCCCCACTTTTCTATACGCCAACGTGAAAGGGCTTAAAATCGGAAATGGGTCGTTGGAATGCGCCGTTTGTTTGTCCGAATTCGAAGATGATGCAACGCTCCGGTTGTTGCCGAAATGCAGCCATGTCTTCCACGCCGATTGCATCGACGCGTGGTTGGTGTCTCACTCGACCTGCCCTGTTTGCCGCGCTAGCCTTGTCCCAAAACCCGGCGATGTATCCTTTGCTGCGTTGCTCAATTCCGATTTGGGAATTGACCGGAGCGGACCGGTGACCGGATCGGAAAGTGGTCAGGTAATTGTTCGAATTCCGGAGGGGAATCAAGGGCAGGAAGTGAGTTTGATAAACCCAAATGAGGGATTGAATCAGAACGGTCCAATTCGGTCGCGATCGACGGGATGGCGATTGAGCGGGCTGTTCCCACGGTCGCATTCGACGGGGCACTCGCTGATCGGAAGAGGGGAGGATTACGAGAGGTTTACGCTGAGATTGCCGGAGGAGGTACGAAGTGAGCTGTTGAATTGGAATTTGAATCGGGCGAGGAGCTGCGTGGCGTTGCCGAGGGAGCAGAGTTCGAGACAGGGGTACCGGAGTGAGGTGGGGAAGAATGGGTTTTCGGGGAATCGGAGTAGAAATGGGTGGGTGGAGTGGCGGCGGACATTGTTACCGGCGACGCCATTTCTTGGAAGGGAGGGTTCGAGAAAGGATGTGATTGTCAACGGAGATGGCAGTGGACGGCCGTTCTCCAGGTTGCCGGGTGATGTCGACGGGGAAGTCAAAGTCAACGATAACGTAGGCGGCTGA

Protein sequence

MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALPREQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRPFSRLPGDVDGEVKVNDNVGG
Homology
[Close]
BLAST of Carg22489 vs. NCBI nr
Match: XP_023538240.1 (RING-H2 finger protein ATL34-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 745.7 bits (1924), Expect = 7.6e-212
Identity = 373/380 (98.16%), Postives = 376/380 (98.95%), Query Frame = 0 

Query: 1   MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60
           MLSPALNHVAAAFLFY ILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL
Sbjct: 35  MLSPALNHVAAAFLFYFILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 94

Query: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 120
           VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATN RSRTAARGL+ADVIATFPTFLYA
Sbjct: 95  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNTRSRTAARGLNADVIATFPTFLYA 154

Query: 121 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180
           NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV
Sbjct: 155 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 214

Query: 181 PKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 240
           PKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI
Sbjct: 215 PKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 274

Query: 241 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALP 300
           RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSE+LNWNLNRARSCVALP
Sbjct: 275 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSEVLNWNLNRARSCVALP 334

Query: 301 REQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRP 360
           REQSSRQGYRSEVGKNGF GNRSR+GWVEWRRTLLPATP LGREGSRKDVIVNGDGSGRP
Sbjct: 335 REQSSRQGYRSEVGKNGFLGNRSRSGWVEWRRTLLPATPLLGREGSRKDVIVNGDGSGRP 394

Query: 361 FSRLPGDVDGEVKVNDNVGG 381
           FSRLPGDVDGEVKVNDNVGG
Sbjct: 395 FSRLPGDVDGEVKVNDNVGG 414

[Close]
BLAST of Carg22489 vs. NCBI nr
Match: XP_022951013.1 (RING-H2 finger protein ATL34-like [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 1.3e-211
Identity = 373/380 (98.16%), Postives = 375/380 (98.68%), Query Frame = 0 

Query: 1   MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60
           MLSPALNHVAAAFLFYSILLADVSSLA AQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL
Sbjct: 42  MLSPALNHVAAAFLFYSILLADVSSLATAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 101

Query: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 120
           VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA
Sbjct: 102 VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 161

Query: 121 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180
           NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV
Sbjct: 162 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 221

Query: 181 PKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 240
           PKPGDVSFAALLNSDLGIDRSGPV GSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI
Sbjct: 222 PKPGDVSFAALLNSDLGIDRSGPVIGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 281

Query: 241 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALP 300
           RSRSTGWRLSGLFPRSHSTGHSLIGRG DY+RFTLRLPEEVRSELLNWNLNRARSCVALP
Sbjct: 282 RSRSTGWRLSGLFPRSHSTGHSLIGRGGDYQRFTLRLPEEVRSELLNWNLNRARSCVALP 341

Query: 301 REQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRP 360
           REQSSRQGYRSEVGKNGF GNRSR+GWVEWRRTLLPATP LGREGSRKDVIVNGDGSGRP
Sbjct: 342 REQSSRQGYRSEVGKNGFLGNRSRSGWVEWRRTLLPATPLLGREGSRKDVIVNGDGSGRP 401

Query: 361 FSRLPGDVDGEVKVNDNVGG 381
           FSRLPGDVDGEVKVNDNVGG
Sbjct: 402 FSRLPGDVDGEVKVNDNVGG 421

[Close]
BLAST of Carg22489 vs. NCBI nr
Match: XP_023002384.1 (RING-H2 finger protein ATL34-like [Cucurbita maxima])

HSP 1 Score: 692.2 bits (1785), Expect = 9.9e-196
Identity = 348/380 (91.58%), Postives = 354/380 (93.16%), Query Frame = 0 

Query: 1   MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60
           M SPALNHVAAAFLFYSILLAD++SLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL
Sbjct: 1   MPSPALNHVAAAFLFYSILLADIASLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60

Query: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 120
           VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATN RSRTAARGLDADVIATFPTFLYA
Sbjct: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNTRSRTAARGLDADVIATFPTFLYA 120

Query: 121 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180
           NVKGL+IGNGSLECA+CLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV
Sbjct: 121 NVKGLRIGNGSLECAICLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180

Query: 181 PKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 240
           PKPGDVSFAALLNSDLGIDRSGPVTG+ESGQVIVRIPEGNQGQEVS              
Sbjct: 181 PKPGDVSFAALLNSDLGIDRSGPVTGAESGQVIVRIPEGNQGQEVSXXXXXXXXXXXXXX 240

Query: 241 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALP 300
                 WRLSGLFPRSHSTGHSLIGRGEDY RFTLRLPEEVRSELLNWNLNRARSCVALP
Sbjct: 241 XXXXXXWRLSGLFPRSHSTGHSLIGRGEDYARFTLRLPEEVRSELLNWNLNRARSCVALP 300

Query: 301 REQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRP 360
           REQSSRQGYRSEVGKNGF GNRSRNGWVEWRRTLLPATP LGREGSRKDVIVNGDG GRP
Sbjct: 301 REQSSRQGYRSEVGKNGFLGNRSRNGWVEWRRTLLPATPLLGREGSRKDVIVNGDGCGRP 360

Query: 361 FSRLPGDVDGEVKVNDNVGG 381
           FSRLPGDVDG+VKVNDNVGG
Sbjct: 361 FSRLPGDVDGKVKVNDNVGG 380

[Close]
BLAST of Carg22489 vs. NCBI nr
Match: XP_008444873.1 (PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo])

HSP 1 Score: 530.0 bits (1364), Expect = 6.5e-147
Identity = 281/371 (75.74%), Postives = 307/371 (82.75%), Query Frame = 0 

Query: 6   LNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFI 65
           LNHV      Y ILL+ V SLAAAQSG     +PPD+YPFKQTISKRMA+VLIVLVCFFI
Sbjct: 9   LNHV----FVYFILLSHV-SLAAAQSG-----APPDMYPFKQTISKRMAVVLIVLVCFFI 68

Query: 66  VIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYANVKGL 125
           V+AVLSVYTRQCT+Q FGGRLLL T     NARSR AARGLDA VIATFPTF+Y+NVK L
Sbjct: 69  VVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVKDL 128

Query: 126 KIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGD 185
           KIG GSLECA+CLSEF DD TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKPGD
Sbjct: 129 KIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGD 188

Query: 186 VSFAALLNSDLGIDRSG-----PVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 245
           +SFAALLNSD GID +G       TG+E+ QVIVRIPE NQGQ+V+LI PN+GLNQ+  I
Sbjct: 189 ISFAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGLNQSRSI 248

Query: 246 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALP 305
           RSRS+GWRLSGLFPRSHSTGHSL+ RG DYER+TLRLPEEVRSELLN NLNRARSCVA  
Sbjct: 249 RSRSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARSCVAFQ 308

Query: 306 REQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRP 365
           R QSSRQGYR+E+GKNG  GNRSR+G  EW RTLLP  P   REGSRKD  VNGD  GRP
Sbjct: 309 RMQSSRQGYRNELGKNGLVGNRSRSGRSEW-RTLLPGAPLFKREGSRKD--VNGDDGGRP 366

Query: 366 FSRLPGDVDGE 372
           F+RL  D DG+
Sbjct: 369 FARLRADCDGQ 366

[Close]
BLAST of Carg22489 vs. NCBI nr
Match: XP_004152750.1 (PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus] >KGN62719.1 hypothetical protein Csa_2G369210 [Cucumis sativus])

HSP 1 Score: 520.8 bits (1340), Expect = 4.0e-144
Identity = 279/376 (74.20%), Postives = 310/376 (82.45%), Query Frame = 0 

Query: 1   MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60
           M S +L  V   F+++ ILL+ V SL AAQSG     +PPD+YPFKQTISKRMA+VLIVL
Sbjct: 1   MTSQSLFFVNHVFIYF-ILLSHV-SLTAAQSG-----APPDMYPFKQTISKRMAVVLIVL 60

Query: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 120
           VCFFIV+AVLSVYTRQCT+Q FGGRLLL      TNARSR AARGLDA VIATFPTF+Y+
Sbjct: 61  VCFFIVVAVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYS 120

Query: 121 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180
           NVK LKIG GSLECA+CLSEF DD TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLV
Sbjct: 121 NVKDLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV 180

Query: 181 PKPGDVSFAALLNSDLGIDRSG-----PVTGSESGQVIVRIPEGNQGQEVSLINPNEGLN 240
           PKPGD+SFAALLNSD GID +G       TGSE+ QV+V+IPE NQGQ+V+LI PN+GLN
Sbjct: 181 PKPGDISFAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGLN 240

Query: 241 QNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARS 300
           Q+  IRSRS+GWRLSGLFPRSHSTGHSL+ RG DYER+TLRLPEEVRSELLN NLNRARS
Sbjct: 241 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARS 300

Query: 301 CVALPREQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGD 360
           CVA  R QSSRQGYR+E+GKNG  GNRSR+G  EW RTLL A P L REGSRK   VNGD
Sbjct: 301 CVAFQRMQSSRQGYRNELGKNGSVGNRSRSGRPEW-RTLLAAAPLLKREGSRKG--VNGD 360

Query: 361 GSGRPFSRLPGDVDGE 372
             GRPF+RL  D DG+
Sbjct: 361 EGGRPFARLRPDGDGQ 366

[Close]
BLAST of Carg22489 vs. TAIR10
Match: AT1G72200.1 (RING/U-box superfamily protein)

HSP 1 Score: 206.8 bits (525), Expect = 2.3e-53
Identity = 121/265 (45.66%), Postives = 163/265 (61.51%), Query Frame = 0 

Query: 53  MAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATN--ARSRTAARGLDADV 112
           MAI++IVLV  F  +   SVY R+C ++  G  +       A N  A +R  ARGLDA +
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 113 IATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHS 172
           I TFPTF Y+ VK L+IG  +LEC+VCL+EFEDD TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 173 TCPVCRASLVPKPGD----VSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVS 232
           TCP+CRA L+P PG+    +    L+N   G D +G    S      +  P+    + V+
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNGDRIRS------LGSPDARLIESVA 242

Query: 233 LINPNEGLNQNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELL 292
           L       NQ+ P RS STGW L+G+F  S  TG       E+ +RFTLRLP+++ ++L+
Sbjct: 243 LT-----CNQSMPRRSMSTGWNLAGMFTNSDRTGQ----HSENLDRFTLRLPQDIHNKLV 302

Query: 293 NWNLNRARSCVALPREQSSRQGYRS 312
           N NL++    VALP+  SS +GYR+
Sbjct: 303 NPNLSKVH--VALPQVMSSTRGYRT 308

[Close]
BLAST of Carg22489 vs. TAIR10
Match: AT4G09120.1 (RING/U-box superfamily protein)

HSP 1 Score: 196.1 bits (497), Expect = 4.1e-50
Identity = 130/286 (45.45%), Postives = 171/286 (59.79%), Query Frame = 0 

Query: 46  KQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARG 105
           +QT     +I+ IV++  FI + ++S     C    F    + +  Q   ++R+R   RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC----CLHCIFYREEIGAAGQDVLHSRAR---RG 101

Query: 106 LDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAW 165
           L+ +VI +FPTFLY+ VKGLKIG G +ECA+CLSEFED  TLR +P CSH FHA+CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 166 LVSHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV 225
           L S STCPVCRA+L  KPG+      LN D+           E+G V             
Sbjct: 162 LSSWSTCPVCRANLSLKPGE--SYPYLNMDV-----------ETGGV------------Q 221

Query: 226 SLINPNEGLNQNGPIRSRSTG----WRLSGLF-PRSHSTGHSLIGR-GEDYERFTLRLPE 285
            L N       +   RSRSTG    WR++ +F PRSHSTGHSL+ + GE+ +RFTL+LPE
Sbjct: 222 KLPNERSLTGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPE 281

Query: 286 EVRSELLNWNLNRARSCVALPREQSSRQGYRS-EVG--KNGFSGNR 323
           EV+ +L++ NL R RS + LP+  SSRQGYRS  VG  + GFS  R
Sbjct: 282 EVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQGR 294

[Close]
BLAST of Carg22489 vs. TAIR10
Match: AT1G22500.1 (RING/U-box superfamily protein)

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-50
Identity = 130/326 (39.88%), Postives = 185/326 (56.75%), Query Frame = 0 

Query: 46  KQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARG 105
           + + S   AI++IVLV  F  +  +SVY R+C  QH  G           N R +T   G
Sbjct: 32  RTSFSPTTAIIMIVLVSVFFALGCISVYMRRCL-QHALGMDSGGGPGNWLNVR-QTTEPG 91

Query: 106 LDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAW 165
           LDA VI TFPTF Y+ VK L+IG  +LEC VCL+EFEDD TLRL+P+C HVFH  CIDAW
Sbjct: 92  LDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAW 151

Query: 166 LVSHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV 225
           L S +TCP+CRA+LVP PG+            +    P    E+GQ  +R P  +  + V
Sbjct: 152 LRSQTTCPLCRANLVPVPGE-----------SVSSEIPGLARETGQNSLRTPIDDNRKRV 211

Query: 226 SLINPNEGL--------NQNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRL 285
            L +P+E L        NQ+ P +S STGW+L+ L+  + S G       E+ +R+TLRL
Sbjct: 212 -LTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQP----EENLDRYTLRL 271

Query: 286 PEEVRSELLNWNLNR--ARSCVALPREQSSRQGYRS---EVGKNGFSGNR-SRNGWVEWR 345
           P+E+  +L+N +L +  ++  +ALP+E+SS +G+R+      KN F   R  ++G ++ R
Sbjct: 272 PQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGSLGTEKNYFYFERFDQDGRLD-R 331

Query: 346 RTLLPATPFLGREGSRKDVIVNGDGS 358
           R      P+  R     D I+N  G+
Sbjct: 332 RPFSITPPYHTRSIQSPDEIINASGN 338

[Close]
BLAST of Carg22489 vs. TAIR10
Match: AT4G09130.1 (RING/U-box superfamily protein)

HSP 1 Score: 195.7 bits (496), Expect = 5.3e-50
Identity = 131/294 (44.56%), Postives = 172/294 (58.50%), Query Frame = 0 

Query: 50  SKRMAIVLIVLVCFFIVIAVLSVYTRQC--TDQHFGGRLLLSTAQTATNARSRTAARGLD 109
           SK  +I+ IVL+  F+++ V+      C   +   GG  +L       ++R R   RG+D
Sbjct: 44  SKESSIIGIVLLSLFLLLLVVYCLNYGCCIEENETGGHEVL-------HSRVR---RGID 103

Query: 110 ADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLV 169
            DVI +FP FLY+ VK  KIGNG +ECA+CL EFED+  LR +P CSH FHA+CID WL 
Sbjct: 104 KDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLS 163

Query: 170 SHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV-- 229
           S STCPVCRA+L  K GD SF              P    E+G     + E    + +  
Sbjct: 164 SRSTCPVCRANLSLKSGD-SF------------PHPSMDVETGNAQRGVQESPDERSLTG 223

Query: 230 SLINPNEGLNQNGPIRSRSTG----WRLSGLF-PRSHSTGHSLIGRGEDYERFTLRLPEE 289
           S +  N   N   P RSRSTG    W +  LF PRSHSTGHSL+   ++ +RFTL+LPEE
Sbjct: 224 SSVTCNNNANYTTP-RSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNIDRFTLQLPEE 283

Query: 290 VRSELLNWNLNRARSCVALPREQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTL 335
           V+ +L++ NL + RS +ALPR +SSRQGYRS     G  GN  R G+ + R+TL
Sbjct: 284 VQRQLVSLNLIK-RSHIALPRARSSRQGYRS-----GSVGN-ERTGFSQGRQTL 306

[Close]
BLAST of Carg22489 vs. TAIR10
Match: AT1G35330.1 (RING/U-box superfamily protein)

HSP 1 Score: 195.3 bits (495), Expect = 6.9e-50
Identity = 126/289 (43.60%), Postives = 164/289 (56.75%), Query Frame = 0 

Query: 33  QPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQ 92
           QP   +PP +      +   + I +++    F ++A    Y    T  H G         
Sbjct: 29  QPRTTAPPYIAQRPNQV-PAVIIAMLMFTLLFSMLACCVCYKYTNTSPH-GTSSDTEEGG 88

Query: 93  TATNARSRTAARGLDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPK 152
               A +R  +RGL  DVI +FP+FLY+ VKGLKIG G +ECA+CL+EFED+ TLRL+P 
Sbjct: 89  HGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPP 148

Query: 153 CSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALL------NSDLGIDRSGPVTG 212
           CSH FHA CID WL S STCPVCRASL PKPG    +         N D+ ++    VT 
Sbjct: 149 CSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLEN---VTA 208

Query: 213 SESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPIRSRSTG---WRLSG-LFPRSHSTGHS 272
             S   ++  P+      +S  N N G N   P RSRSTG   WR++  LFPRSHSTGHS
Sbjct: 209 RRS---VLESPDVRLLDRLSWSN-NTGANT--PPRSRSTGLSNWRITELLFPRSHSTGHS 268

Query: 273 LIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALPREQSSRQGYRS 312
           L+ R E+ +RFTL+LPEEVR +L +           LP+ +SSR+GYRS
Sbjct: 269 LVPRVENLDRFTLQLPEEVRRQLSHMK--------TLPQARSSREGYRS 298

[Close]
BLAST of Carg22489 vs. Swiss-Prot
Match: sp|Q84W40|ATL11_ARATH (RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2)

HSP 1 Score: 206.8 bits (525), Expect = 4.1e-52
Identity = 121/265 (45.66%), Postives = 163/265 (61.51%), Query Frame = 0 

Query: 53  MAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATN--ARSRTAARGLDADV 112
           MAI++IVLV  F  +   SVY R+C ++  G  +       A N  A +R  ARGLDA +
Sbjct: 63  MAILMIVLVSVFFFLGFFSVYIRRCLERVMG--MDYGNPNDAGNWLATNRQQARGLDASI 122

Query: 113 IATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHS 172
           I TFPTF Y+ VK L+IG  +LEC+VCL+EFEDD TLRL+PKC HVFH  CIDAWL SH+
Sbjct: 123 IETFPTFQYSTVKTLRIGKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHT 182

Query: 173 TCPVCRASLVPKPGD----VSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVS 232
           TCP+CRA L+P PG+    +    L+N   G D +G    S      +  P+    + V+
Sbjct: 183 TCPLCRADLIPVPGESIVSIQIPGLVNDPPGSDPNGDRIRS------LGSPDARLIESVA 242

Query: 233 LINPNEGLNQNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELL 292
           L       NQ+ P RS STGW L+G+F  S  TG       E+ +RFTLRLP+++ ++L+
Sbjct: 243 LT-----CNQSMPRRSMSTGWNLAGMFTNSDRTGQ----HSENLDRFTLRLPQDIHNKLV 302

Query: 293 NWNLNRARSCVALPREQSSRQGYRS 312
           N NL++    VALP+  SS +GYR+
Sbjct: 303 NPNLSKVH--VALPQVMSSTRGYRT 308

[Close]
BLAST of Carg22489 vs. Swiss-Prot
Match: sp|Q9M0R5|ATL36_ARATH (Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 PE=3 SV=1)

HSP 1 Score: 196.1 bits (497), Expect = 7.3e-49
Identity = 130/286 (45.45%), Postives = 171/286 (59.79%), Query Frame = 0 

Query: 46  KQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARG 105
           +QT     +I+ IV++  FI + ++S     C    F    + +  Q   ++R+R   RG
Sbjct: 42  RQTNLSADSIIAIVVLAIFISLGMVSC----CLHCIFYREEIGAAGQDVLHSRAR---RG 101

Query: 106 LDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAW 165
           L+ +VI +FPTFLY+ VKGLKIG G +ECA+CLSEFED  TLR +P CSH FHA+CID W
Sbjct: 102 LEKEVIESFPTFLYSEVKGLKIGKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVW 161

Query: 166 LVSHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV 225
           L S STCPVCRA+L  KPG+      LN D+           E+G V             
Sbjct: 162 LSSWSTCPVCRANLSLKPGE--SYPYLNMDV-----------ETGGV------------Q 221

Query: 226 SLINPNEGLNQNGPIRSRSTG----WRLSGLF-PRSHSTGHSLIGR-GEDYERFTLRLPE 285
            L N       +   RSRSTG    WR++ +F PRSHSTGHSL+ + GE+ +RFTL+LPE
Sbjct: 222 KLPNERSLTGNSVTTRSRSTGLLSSWRMAEIFVPRSHSTGHSLVQQLGENLDRFTLQLPE 281

Query: 286 EVRSELLNWNLNRARSCVALPREQSSRQGYRS-EVG--KNGFSGNR 323
           EV+ +L++ NL R RS + LP+  SSRQGYRS  VG  + GFS  R
Sbjct: 282 EVQRQLVSLNLIR-RSHIVLPQAVSSRQGYRSGSVGSERGGFSQGR 294

[Close]
BLAST of Carg22489 vs. Swiss-Prot
Match: sp|Q9SK92|ATL15_ARATH (E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.5e-49
Identity = 130/326 (39.88%), Postives = 185/326 (56.75%), Query Frame = 0 

Query: 46  KQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARG 105
           + + S   AI++IVLV  F  +  +SVY R+C  QH  G           N R +T   G
Sbjct: 32  RTSFSPTTAIIMIVLVSVFFALGCISVYMRRCL-QHALGMDSGGGPGNWLNVR-QTTEPG 91

Query: 106 LDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAW 165
           LDA VI TFPTF Y+ VK L+IG  +LEC VCL+EFEDD TLRL+P+C HVFH  CIDAW
Sbjct: 92  LDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCHVFHPGCIDAW 151

Query: 166 LVSHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV 225
           L S +TCP+CRA+LVP PG+            +    P    E+GQ  +R P  +  + V
Sbjct: 152 LRSQTTCPLCRANLVPVPGE-----------SVSSEIPGLARETGQNSLRTPIDDNRKRV 211

Query: 226 SLINPNEGL--------NQNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRL 285
            L +P+E L        NQ+ P +S STGW+L+ L+  + S G       E+ +R+TLRL
Sbjct: 212 -LTSPDERLIDSVAWTGNQSMPRKSMSTGWKLAELYSPASSPGQP----EENLDRYTLRL 271

Query: 286 PEEVRSELLNWNLNR--ARSCVALPREQSSRQGYRS---EVGKNGFSGNR-SRNGWVEWR 345
           P+E+  +L+N +L +  ++  +ALP+E+SS +G+R+      KN F   R  ++G ++ R
Sbjct: 272 PQEIHDQLVNSSLGKQGSKGQLALPQERSSVRGFRTGSLGTEKNYFYFERFDQDGRLD-R 331

Query: 346 RTLLPATPFLGREGSRKDVIVNGDGS 358
           R      P+  R     D I+N  G+
Sbjct: 332 RPFSITPPYHTRSIQSPDEIINASGN 338

[Close]
BLAST of Carg22489 vs. Swiss-Prot
Match: sp|Q9M0R4|ATL37_ARATH (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 PE=3 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 9.5e-49
Identity = 131/294 (44.56%), Postives = 172/294 (58.50%), Query Frame = 0 

Query: 50  SKRMAIVLIVLVCFFIVIAVLSVYTRQC--TDQHFGGRLLLSTAQTATNARSRTAARGLD 109
           SK  +I+ IVL+  F+++ V+      C   +   GG  +L       ++R R   RG+D
Sbjct: 44  SKESSIIGIVLLSLFLLLLVVYCLNYGCCIEENETGGHEVL-------HSRVR---RGID 103

Query: 110 ADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLV 169
            DVI +FP FLY+ VK  KIGNG +ECA+CL EFED+  LR +P CSH FHA+CID WL 
Sbjct: 104 KDVIESFPAFLYSEVKAFKIGNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLS 163

Query: 170 SHSTCPVCRASLVPKPGDVSFAALLNSDLGIDRSGPVTGSESGQVIVRIPEGNQGQEV-- 229
           S STCPVCRA+L  K GD SF              P    E+G     + E    + +  
Sbjct: 164 SRSTCPVCRANLSLKSGD-SF------------PHPSMDVETGNAQRGVQESPDERSLTG 223

Query: 230 SLINPNEGLNQNGPIRSRSTG----WRLSGLF-PRSHSTGHSLIGRGEDYERFTLRLPEE 289
           S +  N   N   P RSRSTG    W +  LF PRSHSTGHSL+   ++ +RFTL+LPEE
Sbjct: 224 SSVTCNNNANYTTP-RSRSTGLLSSWHVPELFLPRSHSTGHSLVQPCQNIDRFTLQLPEE 283

Query: 290 VRSELLNWNLNRARSCVALPREQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTL 335
           V+ +L++ NL + RS +ALPR +SSRQGYRS     G  GN  R G+ + R+TL
Sbjct: 284 VQRQLVSLNLIK-RSHIALPRARSSRQGYRS-----GSVGN-ERTGFSQGRQTL 306

[Close]
BLAST of Carg22489 vs. Swiss-Prot
Match: sp|Q9C7I1|ATL34_ARATH (RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 1.2e-48
Identity = 126/289 (43.60%), Postives = 164/289 (56.75%), Query Frame = 0 

Query: 33  QPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQ 92
           QP   +PP +      +   + I +++    F ++A    Y    T  H G         
Sbjct: 29  QPRTTAPPYIAQRPNQV-PAVIIAMLMFTLLFSMLACCVCYKYTNTSPH-GTSSDTEEGG 88

Query: 93  TATNARSRTAARGLDADVIATFPTFLYANVKGLKIGNGSLECAVCLSEFEDDATLRLLPK 152
               A +R  +RGL  DVI +FP+FLY+ VKGLKIG G +ECA+CL+EFED+ TLRL+P 
Sbjct: 89  HGEVAFTRRTSRGLGKDVINSFPSFLYSQVKGLKIGKGGVECAICLNEFEDEETLRLMPP 148

Query: 153 CSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALL------NSDLGIDRSGPVTG 212
           CSH FHA CID WL S STCPVCRASL PKPG    +         N D+ ++    VT 
Sbjct: 149 CSHAFHASCIDVWLSSRSTCPVCRASLPPKPGSDQNSLYPFIRPHDNQDMDLEN---VTA 208

Query: 213 SESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPIRSRSTG---WRLSG-LFPRSHSTGHS 272
             S   ++  P+      +S  N N G N   P RSRSTG   WR++  LFPRSHSTGHS
Sbjct: 209 RRS---VLESPDVRLLDRLSWSN-NTGANT--PPRSRSTGLSNWRITELLFPRSHSTGHS 268

Query: 273 LIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALPREQSSRQGYRS 312
           L+ R E+ +RFTL+LPEEVR +L +           LP+ +SSR+GYRS
Sbjct: 269 LVPRVENLDRFTLQLPEEVRRQLSHMK--------TLPQARSSREGYRS 298

[Close]
BLAST of Carg22489 vs. TrEMBL
Match: tr|A0A1S3BBD9|A0A1S3BBD9_CUCME (RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 SV=1)

HSP 1 Score: 530.0 bits (1364), Expect = 4.3e-147
Identity = 281/371 (75.74%), Postives = 307/371 (82.75%), Query Frame = 0 

Query: 6   LNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFI 65
           LNHV      Y ILL+ V SLAAAQSG     +PPD+YPFKQTISKRMA+VLIVLVCFFI
Sbjct: 9   LNHV----FVYFILLSHV-SLAAAQSG-----APPDMYPFKQTISKRMAVVLIVLVCFFI 68

Query: 66  VIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYANVKGL 125
           V+AVLSVYTRQCT+Q FGGRLLL T     NARSR AARGLDA VIATFPTF+Y+NVK L
Sbjct: 69  VVAVLSVYTRQCTEQRFGGRLLLPTHLDGANARSRRAARGLDAAVIATFPTFVYSNVKDL 128

Query: 126 KIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGD 185
           KIG GSLECA+CLSEF DD TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLVPKPGD
Sbjct: 129 KIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLVPKPGD 188

Query: 186 VSFAALLNSDLGIDRSG-----PVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPI 245
           +SFAALLNSD GID +G       TG+E+ QVIVRIPE NQGQ+V+LI PN+GLNQ+  I
Sbjct: 189 ISFAALLNSDSGIDGNGRDEGNRGTGAENNQVIVRIPEENQGQDVNLITPNQGLNQSRSI 248

Query: 246 RSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALP 305
           RSRS+GWRLSGLFPRSHSTGHSL+ RG DYER+TLRLPEEVRSELLN NLNRARSCVA  
Sbjct: 249 RSRSSGWRLSGLFPRSHSTGHSLVQRGVDYERYTLRLPEEVRSELLNSNLNRARSCVAFQ 308

Query: 306 REQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGDGSGRP 365
           R QSSRQGYR+E+GKNG  GNRSR+G  EW RTLLP  P   REGSRKD  VNGD  GRP
Sbjct: 309 RMQSSRQGYRNELGKNGLVGNRSRSGRSEW-RTLLPGAPLFKREGSRKD--VNGDDGGRP 366

Query: 366 FSRLPGDVDGE 372
           F+RL  D DG+
Sbjct: 369 FARLRADCDGQ 366

[Close]
BLAST of Carg22489 vs. TrEMBL
Match: tr|A0A0A0LNW5|A0A0A0LNW5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1)

HSP 1 Score: 520.8 bits (1340), Expect = 2.6e-144
Identity = 279/376 (74.20%), Postives = 310/376 (82.45%), Query Frame = 0 

Query: 1   MLSPALNHVAAAFLFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVL 60
           M S +L  V   F+++ ILL+ V SL AAQSG     +PPD+YPFKQTISKRMA+VLIVL
Sbjct: 1   MTSQSLFFVNHVFIYF-ILLSHV-SLTAAQSG-----APPDMYPFKQTISKRMAVVLIVL 60

Query: 61  VCFFIVIAVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYA 120
           VCFFIV+AVLSVYTRQCT+Q FGGRLLL      TNARSR AARGLDA VIATFPTF+Y+
Sbjct: 61  VCFFIVVAVLSVYTRQCTEQRFGGRLLLPAPLDGTNARSRRAARGLDAAVIATFPTFVYS 120

Query: 121 NVKGLKIGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLV 180
           NVK LKIG GSLECA+CLSEF DD TLRLLPKCSHVFH+DCIDAWLVSHSTCPVCRASLV
Sbjct: 121 NVKDLKIGKGSLECAICLSEFGDDDTLRLLPKCSHVFHSDCIDAWLVSHSTCPVCRASLV 180

Query: 181 PKPGDVSFAALLNSDLGIDRSG-----PVTGSESGQVIVRIPEGNQGQEVSLINPNEGLN 240
           PKPGD+SFAALLNSD GID +G       TGSE+ QV+V+IPE NQGQ+V+LI PN+GLN
Sbjct: 181 PKPGDISFAALLNSDSGIDGNGRDEGNRGTGSENNQVVVQIPEENQGQDVNLITPNQGLN 240

Query: 241 QNGPIRSRSTGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARS 300
           Q+  IRSRS+GWRLSGLFPRSHSTGHSL+ RG DYER+TLRLPEEVRSELLN NLNRARS
Sbjct: 241 QSRSIRSRSSGWRLSGLFPRSHSTGHSLVQRGMDYERYTLRLPEEVRSELLNSNLNRARS 300

Query: 301 CVALPREQSSRQGYRSEVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREGSRKDVIVNGD 360
           CVA  R QSSRQGYR+E+GKNG  GNRSR+G  EW RTLL A P L REGSRK   VNGD
Sbjct: 301 CVAFQRMQSSRQGYRNELGKNGSVGNRSRSGRPEW-RTLLAAAPLLKREGSRKG--VNGD 360

Query: 361 GSGRPFSRLPGDVDGE 372
             GRPF+RL  D DG+
Sbjct: 361 EGGRPFARLRPDGDGQ 366

[Close]
BLAST of Carg22489 vs. TrEMBL
Match: tr|A0A2I4E960|A0A2I4E960_9ROSI (RING-H2 finger protein ATL11-like OS=Juglans regia OX=51240 GN=LOC108987460 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.9e-79
Identity = 182/351 (51.85%), Postives = 228/351 (64.96%), Query Frame = 0 

Query: 12  AFLFYSILLADVSSLAAAQSGQP---TVPSPPD-LYPFKQTISKRMAIVLIVLVCFFIVI 71
           A++   ++L  +S LAAAQ+  P   TVP P D L   K    KRMA+++++LV  F V+
Sbjct: 24  AWIVELLVLMQLSPLAAAQNLPPPQGTVPGPQDPLAGLK--FDKRMALIMVILVAVFFVL 83

Query: 72  AVLSVYTRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYANVKGLKI 131
             LSVY RQCTD    GRL  S      + RSR  ARG+D+  I TFPTF+Y+ VKGLKI
Sbjct: 84  GFLSVYVRQCTDYRIRGRLDHSIPVGGNDRRSR-MARGVDSSTINTFPTFVYSTVKGLKI 143

Query: 132 GNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVS 191
           G GSLECAVCL+EFEDD TLRLLPKCSHVFH DCIDAWL SHSTCPVCRA+L+ KPG++ 
Sbjct: 144 GKGSLECAVCLNEFEDDETLRLLPKCSHVFHTDCIDAWLASHSTCPVCRANLILKPGEIP 203

Query: 192 FAALLNSDLGIDRSGPVTGSESGQVIVRIPEG----NQGQEVSLINPNEGLNQNGPIRSR 251
            + +   DL  D   P    ++ +   RI +     +    V+L+N  +G NQN P RSR
Sbjct: 204 -SVMHIPDLDNDPVEPDRLPDTDETQSRIADNHIIESDAPNVNLVNHAQGTNQNRPPRSR 263

Query: 252 STGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALPREQ 311
           S+G+R++G+FPRSHSTGHSL+  GE+ ERFTLRLPE+VRS L+N  LNR  S  A PR +
Sbjct: 264 SSGFRITGIFPRSHSTGHSLVQPGENCERFTLRLPEDVRSRLINSTLNRTSSSTAFPRVR 323

Query: 312 SSRQGYRS-EVGKNG-----FSGNRSRNGWVEWRRTLLPATPFLGREGSRK 349
           SSR+GYRS  VG  G     F    +R+G   WR  L     FL R GS +
Sbjct: 324 SSRRGYRSASVGTGGGRNYMFQEQVNRSG--RWRFPL--TRSFLSRTGSAR 366

[Close]
BLAST of Carg22489 vs. TrEMBL
Match: tr|A0A2N9GHT0|A0A2N9GHT0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26743 PE=4 SV=1)

HSP 1 Score: 296.2 bits (757), Expect = 1.0e-76
Identity = 181/356 (50.84%), Postives = 221/356 (62.08%), Query Frame = 0 

Query: 14  LFYSILLADVSSLAAAQSGQPTVPSPPDLYPFKQTISKRMAIVLIVLVCFFIVIAVLSVY 73
           L  S++L +V++  +    QP  P P        T+ +RMA +++VLV  F V+  LSVY
Sbjct: 30  LILSMMLRNVTAQISNTGQQP--PDPMG----GLTLDRRMAWIMVVLVSVFFVLGFLSVY 89

Query: 74  TRQCTDQHFGGRLLLSTAQTATNARSRTAARGLDADVIATFPTFLYANVKGLKIGNGSLE 133
           TRQC D+   GRL L+ A   +  RSR  ARGLDADVI TFPTF+Y+ VKGLKIG GSLE
Sbjct: 90  TRQCADRRIRGRLDLAVAVGGSGRRSR-RARGLDADVIDTFPTFVYSTVKGLKIGKGSLE 149

Query: 134 CAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDVSFAALLN 193
           CAVCL+EFEDD TLRLLPKCSHVFH DCIDAWL SH+TCPVCRA+LVPKPG+   A ++ 
Sbjct: 150 CAVCLNEFEDDETLRLLPKCSHVFHTDCIDAWLASHTTCPVCRANLVPKPGETPRAVVIQ 209

Query: 194 SDLGIDRSGPVTGSESGQVIVRIPEGNQGQEVSLINPNEGLNQNGPIRSRSTGWRLSGLF 253
                     +   E+ QV     E        L+   E  NQN P RSRSTG++ +G+F
Sbjct: 210 ----------IPDPETDQVQPETEEPPAPPPGDLL---ESTNQNRPPRSRSTGFKFAGIF 269

Query: 254 PRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLN-----WNLNRARSC-VALPREQSSRQ 313
           PRSHSTGHSL+  GE+ ERFTLRLP+EVRS L+N      +LNR  SC VA PR +SSR+
Sbjct: 270 PRSHSTGHSLVQPGENQERFTLRLPDEVRSRLMNSTSTTTSLNRTNSCAVAFPRVRSSRR 329

Query: 314 GYRSEVGKNGFSGNRSRNGWV--------EWRRTLLPATPFLGREGSRKDVIVNGD 356
           GYRS  G  G    RSRN            WR +  P   F+ R GS +   V  D
Sbjct: 330 GYRSASGGIG----RSRNFQFYDRFARSDRWRFSFTP--NFISRTGSARSPKVEVD 359

[Close]
BLAST of Carg22489 vs. TrEMBL
Match: tr|A0A1U8NVC1|A0A1U8NVC1_GOSHI (RING-H2 finger protein ATL11-like OS=Gossypium hirsutum OX=3635 GN=LOC107951391 PE=4 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.3e-76
Identity = 177/361 (49.03%), Postives = 222/361 (61.50%), Query Frame = 0 

Query: 14  LFYSILLADVSSLAAAQSGQPTVPSPPDLY-----PFKQTISKRMAIVLIVLVCFFIVIA 73
           L + +  A   SL+ AQS  P    PP  Y     P     +  MAIV++VLV  F V+ 
Sbjct: 26  LLFFLCFALSFSLSTAQSQTPAGQPPPPSYSNSLGPAGNQFNPSMAIVMVVLVTAFFVMG 85

Query: 74  VLSVYTRQCTDQHFGGRLLLSTAQTATN--ARSRTAARGLDADVIATFPTFLYANVKGLK 133
             SVY RQCT++   G         A N   RSR + RGLD+ VI +FPTFLY+ VKGLK
Sbjct: 86  FFSVYVRQCTERRTRG----GNWDAAMNFGRRSRRSIRGLDSSVIESFPTFLYSTVKGLK 145

Query: 134 IGNGSLECAVCLSEFEDDATLRLLPKCSHVFHADCIDAWLVSHSTCPVCRASLVPKPGDV 193
           IG  +LECAVCL+EFEDD TLR++P C+HVFH DCIDAWL SHSTCPVCRA+L PKPGD 
Sbjct: 146 IGKDTLECAVCLNEFEDDETLRMIPMCNHVFHPDCIDAWLSSHSTCPVCRANLAPKPGDS 205

Query: 194 SFAALLN-SDLGIDRSGPVTGSESGQV-IVRIPEGNQGQEVSLINPNEGLNQNGPIRSRS 253
           +  A     D   +     T  E+G + +V      +  EV+LIN N   NQN   RS S
Sbjct: 206 TTCATAQVHDSDSETENNNTSDETGHLDVVNRARDIESPEVNLINSNTANNQNRQQRSLS 265

Query: 254 TGWRLSGLFPRSHSTGHSLIGRGEDYERFTLRLPEEVRSELLNWNLNRARSCVALPREQS 313
           TGW L+ LFPRSHSTGHSL+  GE+ ERFTLRLPE+VR++L+N +L+R +SCVA PR +S
Sbjct: 266 TGWMLTRLFPRSHSTGHSLVQPGENCERFTLRLPEDVRTQLMNSSLSRTKSCVAFPRARS 325

Query: 314 SRQGYRS-EVGKNGFSGNRSRNGWVEWRRTLLPATPFLGREG---SRKDVIVNGD-GSGR 361
           S++GYRS  +G+N ++  R       W  T+ P  PF  R G   S K  +  GD GS  
Sbjct: 326 SKRGYRSRSLGRNYYNYERFDRP-DRWGFTMTP--PFFSRIGSVKSPKPAVCGGDEGSAT 379

The following BLAST results are available for this feature:
BLAST of Carg22489 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_023538240.17.6e-21298.16RING-H2 finger protein ATL34-like [Cucurbita pepo subsp. pepo][more]
XP_022951013.11.3e-21198.16RING-H2 finger protein ATL34-like [Cucurbita moschata][more]
XP_023002384.19.9e-19691.58RING-H2 finger protein ATL34-like [Cucurbita maxima][more]
XP_008444873.16.5e-14775.74PREDICTED: RING-H2 finger protein ATL11-like [Cucumis melo][more]
XP_004152750.14.0e-14474.20PREDICTED: RING-H2 finger protein ATL11-like [Cucumis sativus] >KGN62719.1 hypot... [more]
BLAST of Carg22489 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G72200.12.3e-5345.66RING/U-box superfamily protein[more]
AT4G09120.14.1e-5045.45RING/U-box superfamily protein[more]
AT1G22500.15.3e-5039.88RING/U-box superfamily protein[more]
AT4G09130.15.3e-5044.56RING/U-box superfamily protein[more]
AT1G35330.16.9e-5043.60RING/U-box superfamily protein[more]
BLAST of Carg22489 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q84W40|ATL11_ARATH4.1e-5245.66RING-H2 finger protein ATL11 OS=Arabidopsis thaliana OX=3702 GN=ATL11 PE=2 SV=2[more]
sp|Q9M0R5|ATL36_ARATH7.3e-4945.45Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana OX=3702 GN=ATL36 P... [more]
sp|Q9SK92|ATL15_ARATH9.5e-4939.88E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana OX=3702 GN=ATL15 PE=1 ... [more]
sp|Q9M0R4|ATL37_ARATH9.5e-4944.56Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 P... [more]
sp|Q9C7I1|ATL34_ARATH1.2e-4843.60RING-H2 finger protein ATL34 OS=Arabidopsis thaliana OX=3702 GN=ATL34 PE=2 SV=1[more]
BLAST of Carg22489 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BBD9|A0A1S3BBD9_CUCME4.3e-14775.74RING-H2 finger protein ATL11-like OS=Cucumis melo OX=3656 GN=LOC103488088 PE=4 S... [more]
tr|A0A0A0LNW5|A0A0A0LNW5_CUCSA2.6e-14474.20Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369210 PE=4 SV=1[more]
tr|A0A2I4E960|A0A2I4E960_9ROSI3.9e-7951.85RING-H2 finger protein ATL11-like OS=Juglans regia OX=51240 GN=LOC108987460 PE=4... [more]
tr|A0A2N9GHT0|A0A2N9GHT0_FAGSY1.0e-7650.84Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26743 PE=4 SV=1[more]
tr|A0A1U8NVC1|A0A1U8NVC1_GOSHI2.3e-7649.03RING-H2 finger protein ATL11-like OS=Gossypium hirsutum OX=3635 GN=LOC107951391 ... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR013083Znf_RING/FYVE/PHD
IPR001841Znf_RING
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22489-RACarg22489-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 134..175
e-value: 2.2E-7
score: 40.5
IPR001841Zinc finger, RING-typePFAMPF13639zf-RING_2coord: 133..176
e-value: 1.2E-14
score: 54.2
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 134..176
score: 12.843
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 91..182
e-value: 9.5E-21
score: 75.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 351..380
NoneNo IPR availablePANTHERPTHR14155RING FINGER DOMAIN-CONTAININGcoord: 6..316
NoneNo IPR availablePANTHERPTHR14155:SF414E3 UBIQUITIN-PROTEIN LIGASE ATL15-RELATEDcoord: 6..316
NoneNo IPR availableCDDcd16454RING-H2_PA-TM-RINGcoord: 133..176
e-value: 1.73757E-20
score: 82.7349
NoneNo IPR availableSUPERFAMILYSSF57850RING/U-boxcoord: 129..185

Synteny
The following gene(s) are orthologous to this gene:
GeneOrthologueOrganismBlock
Carg22489Cla022120Watermelon (97103) v1carwmB0818
Carg22489Cla014123Watermelon (97103) v1carwmB0820
Carg22489Csa2G369210Cucumber (Chinese Long) v2carcuB0835
Carg22489MELO3C011053Melon (DHL92) v3.5.1carmeB0816
Carg22489CSPI02G21290Wild cucumber (PI 183967)carcpiB0857
Carg22489Cucsa.160260Cucumber (Gy14) v1carcgyB0937
Carg22489CmaCh05G005160Cucurbita maxima (Rimu)carcmaB1141
Carg22489CmaCh12G002240Cucurbita maxima (Rimu)carcmaB1140
Carg22489CmoCh05G005440Cucurbita moschata (Rifu)carcmoB1112
Carg22489Lsi08G009910Bottle gourd (USVL1VR-Ls)carlsiB751
Carg22489Cp4.1LG11g04420Cucurbita pepo (Zucchini)carcpeB1151
Carg22489Cp4.1LG07g02530Cucurbita pepo (Zucchini)carcpeB1153
Carg22489CsGy2G021010Cucumber (Gy14) v2carcgybB0810
Carg22489MELO3C011053.2Melon (DHL92) v3.6.1carmedB0827
Carg22489CsaV3_2G029950Cucumber (Chinese Long) v3carcucB0860
Carg22489Cla97C08G154360Watermelon (97103) v2carwmbB0855
Carg22489Bhi04G000654Wax gourdcarwgoB0957
The following gene(s) are paralogous to this gene:
GeneParalogueOrganismBlock
Carg22489Carg08209Silver-seed gourdcarcarB069
The following block(s) are covering this gene:
GeneOrganismBlock
Carg22489Silver-seed gourdcarcarB070
Carg22489Silver-seed gourdcarcarB557
Carg22489Cucumber (Gy14) v2carcgybB0812
Carg22489Cucumber (Gy14) v1carcgyB0939
Carg22489Cucurbita maxima (Rimu)carcmaB1139
Carg22489Cucurbita maxima (Rimu)carcmaB1142
Carg22489Cucurbita moschata (Rifu)carcmoB1110
Carg22489Cucurbita moschata (Rifu)carcmoB1111
Carg22489Cucurbita pepo (Zucchini)carcpeB1152
Carg22489Wild cucumber (PI 183967)carcpiB0859
Carg22489Cucumber (Chinese Long) v2carcuB0836
Carg22489Cucumber (Chinese Long) v2carcuB0837
Carg22489Cucumber (Chinese Long) v3carcucB0862
Carg22489Bottle gourd (USVL1VR-Ls)carlsiB750
Carg22489Melon (DHL92) v3.5.1carmeB0815
Carg22489Melon (DHL92) v3.5.1carmeB0817
Carg22489Melon (DHL92) v3.6.1carmedB0828
Carg22489Watermelon (Charleston Gray)carwcgB0794
Carg22489Watermelon (Charleston Gray)carwcgB0795
Carg22489Watermelon (Charleston Gray)carwcgB0796
Carg22489Watermelon (97103) v1carwmB0819
Carg22489Watermelon (97103) v1carwmB0821
Carg22489Watermelon (97103) v2carwmbB0854
Carg22489Wax gourdcarwgoB0960