Carg22474 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGAAAATCTGAATTGCAAGCTTTTTTCACTTTCTCCATTTCCCCCCTCCTATTCTCTCTCCATTTGACAGATTCACAATCCCAATCAATCTACGACGCGGCTTCCACAAGAAGACGAAGAAGAAGAAGAGCAAGGAGGAGGAGAAGAAGTTTATTGTTGTTTCCTCTGCCTCAAGGAAAAATGGAGGTGGTATACTGCTGGAAACGCATCTTTAATTTTCAATTTCTTACTCGAATTTCACGGCTTAAGGATGAAGGATTATGTTTGTGTTGCAGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGTGAGGTATTGCAAAGTTATTTGAATTCATATATAATTTCTAATGGGAATTTACTTTGTTCATTCAATGATTTAGTTGACAGACATTAAAATCCTTTCGCTGTCTGACCGAACTGAGAAAAACATGCATATATGAAAGTATGATCTGATATAAAATGTGTTCGTTGTCTGTTATGTAAAAGTTTTCTGCCATATTGAATGTATTAGTTTGTATTCTTTAGCTACTCATATCAAATGTGTAAGCTCCACACTATGAACCCAAATTGGGTTCGTTAACCGCACATAATCACATGATTTTGATATCACCTTTGGCTCATCACACTATGAACCCGAATTGGGTTTGTTAACCGCCTTTTAACTGATCTTTCTGTGGGAACAAGCTCAACGGATTGTTCTTTCAAATGTCACTGTTGAAACTTCTTTTGGGAAATATTATGGTAATATGGTCATTGTGATTGGTGTAACCTTGAGCCCAATACTATTTGTTATATCAATGTGATTCATTATTCTGGTGTGTTTTTCTACATATTTTTGTTACATACTGTTATGAATTTGCTTGAGATGTAAGATGAATCGTATATGCTTATCACGTCCTGAAATTATGAAATCGAAAGGCGTGGTTGAAAAGGAGGAATGAATAAAGGGAAAAGATATAGCTGATTAGCTTCCTCCCCTTGTCTTTATTTTGTGGAAAAGCTACTAGTTAAGAAGTGGGATTCAACCTTCGTAGATACTTCTAGTCGATCGAACGTTGCCAATCGAGTTATTGCCAGTGGGCTAAGCTGTTAGGTTGGGAATAGATTAAGTGATTAATCCTATCCTAACTTAACAATTTAAAGTCCTAGGTGCACTGGTGATACCGATACAGTATAATCTGCGGCTAATTTTTCATCAATTAGATGTGTTTTTGTGTCAATTCTAATTACAATTCTAATTGTTCTTCCAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAAAAGAAAACCATTTTCTTCGCGACGGAATGCTTCGTTTCCCTTTCCGTTCGTTCCCCTTCCCGTCATC TGAAAATCTGAATTGCAAGCTTTTTTCACTTTCTCCATTTCCCCCCTCCTATTCTCTCTCCATTTGACAGATTCACAATCCCAATCAATCTACGACGCGGCTTCCACAAGAAGACGAAGAAGAAGAAGAGCAAGGAGGAGGAGAAGAAGTTTATTGTTGTTTCCTCTGCCTCAAGGAAAAATGGAGGTGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAAAAGAAAACCATTTTCTTCGCGACGGAATGCTTCGTTTCCCTTTCCGTTCGTTCCCCTTCCCGTCATC ATGGAGGTGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAA MEVESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTGGIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLSKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHSAEELAEHVEICGFRTLTCTNEGCTALFCANHTEQHDSICPFKIIQCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNMGCQFPVPYSLIAQHCTESFDSHLLHILHSIHKEANEETLKHRRQQLEEAASLDHLRGLQNLRLLTKKIKEMESELGPLVIIAEVEETEEAKDASNETEEGKETSNATEEAKDASNATEEKKDVSNGTEETKDASIAAEETKDAPTAIQEREVVSTAIEETKGTSGEGEEANDAEKEETKDAIIATEEGNAVPTAIHERDVVSSAIEETKDVSPKETEEPNDASNEKEEANDASNEKEETEDASTVIEETKDGSDSIETKNASDAAEEETKDATNAEEEETTDASKEEEEEAKKETEESKEGDNGSEERKGPSKGMEERKDYPDEAER
BLAST of Carg22474 vs. NCBI nr
Match: XP_022928672.1 (uncharacterized protein LOC111435517 isoform X1 [Cucurbita moschata]) HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121 Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0
BLAST of Carg22474 vs. NCBI nr
Match: XP_022928673.1 (uncharacterized protein LOC111435517 isoform X2 [Cucurbita moschata]) HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121 Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0
BLAST of Carg22474 vs. NCBI nr
Match: XP_023543547.1 (uncharacterized protein LOC111803401 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543548.1 uncharacterized protein LOC111803401 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121 Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0
BLAST of Carg22474 vs. NCBI nr
Match: XP_022967747.1 (uncharacterized protein LOC111467177 isoform X1 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-120 Identity = 271/285 (95.09%), Postives = 271/285 (95.09%), Query Frame = 0
BLAST of Carg22474 vs. NCBI nr
Match: XP_022967748.1 (uncharacterized protein LOC111467177 isoform X2 [Cucurbita maxima] >XP_022967749.1 uncharacterized protein LOC111467177 isoform X3 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-120 Identity = 271/285 (95.09%), Postives = 271/285 (95.09%), Query Frame = 0
BLAST of Carg22474 vs. TAIR10
Match: AT3G11950.1 (TRAF-like superfamily protein) HSP 1 Score: 270.8 bits (691), Expect = 2.0e-72 Identity = 174/257 (67.70%), Postives = 207/257 (80.54%), Query Frame = 0
BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A1S3B4U5|A0A1S3B4U5_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103486171 PE=4 SV=1) HSP 1 Score: 392.1 bits (1006), Expect = 2.2e-105 Identity = 192/289 (66.44%), Postives = 214/289 (74.05%), Query Frame = 0
BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A0A0L1F8|A0A0A0L1F8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572340 PE=4 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 2.9e-105 Identity = 193/289 (66.78%), Postives = 213/289 (73.70%), Query Frame = 0
BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A251QD79|A0A251QD79_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G061200 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 5.4e-80 Identity = 189/281 (67.26%), Postives = 226/281 (80.43%), Query Frame = 0
BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A2P5EA32|A0A2P5EA32_9ROSA (TRAF-like OS=Trema orientalis OX=63057 GN=TorRG33x02_217850 PE=4 SV=1) HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79 Identity = 191/285 (67.02%), Postives = 225/285 (78.95%), Query Frame = 0
BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A2N9H558|A0A2N9H558_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23888 PE=4 SV=1) HSP 1 Score: 304.3 bits (778), Expect = 6.0e-79 Identity = 151/282 (53.55%), Postives = 183/282 (64.89%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |