Carg22474 (gene) Silver-seed gourd

NameCarg22474
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionTNF receptor-associated factor like
LocationCucurbita_argyrosperma_scaffold_152 : 537370 .. 540432 (-)
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TGAAAATCTGAATTGCAAGCTTTTTTCACTTTCTCCATTTCCCCCCTCCTATTCTCTCTCCATTTGACAGATTCACAATCCCAATCAATCTACGACGCGGCTTCCACAAGAAGACGAAGAAGAAGAAGAGCAAGGAGGAGGAGAAGAAGTTTATTGTTGTTTCCTCTGCCTCAAGGAAAAATGGAGGTGGTATACTGCTGGAAACGCATCTTTAATTTTCAATTTCTTACTCGAATTTCACGGCTTAAGGATGAAGGATTATGTTTGTGTTGCAGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGTGAGGTATTGCAAAGTTATTTGAATTCATATATAATTTCTAATGGGAATTTACTTTGTTCATTCAATGATTTAGTTGACAGACATTAAAATCCTTTCGCTGTCTGACCGAACTGAGAAAAACATGCATATATGAAAGTATGATCTGATATAAAATGTGTTCGTTGTCTGTTATGTAAAAGTTTTCTGCCATATTGAATGTATTAGTTTGTATTCTTTAGCTACTCATATCAAATGTGTAAGCTCCACACTATGAACCCAAATTGGGTTCGTTAACCGCACATAATCACATGATTTTGATATCACCTTTGGCTCATCACACTATGAACCCGAATTGGGTTTGTTAACCGCCTTTTAACTGATCTTTCTGTGGGAACAAGCTCAACGGATTGTTCTTTCAAATGTCACTGTTGAAACTTCTTTTGGGAAATATTATGGTAATATGGTCATTGTGATTGGTGTAACCTTGAGCCCAATACTATTTGTTATATCAATGTGATTCATTATTCTGGTGTGTTTTTCTACATATTTTTGTTACATACTGTTATGAATTTGCTTGAGATGTAAGATGAATCGTATATGCTTATCACGTCCTGAAATTATGAAATCGAAAGGCGTGGTTGAAAAGGAGGAATGAATAAAGGGAAAAGATATAGCTGATTAGCTTCCTCCCCTTGTCTTTATTTTGTGGAAAAGCTACTAGTTAAGAAGTGGGATTCAACCTTCGTAGATACTTCTAGTCGATCGAACGTTGCCAATCGAGTTATTGCCAGTGGGCTAAGCTGTTAGGTTGGGAATAGATTAAGTGATTAATCCTATCCTAACTTAACAATTTAAAGTCCTAGGTGCACTGGTGATACCGATACAGTATAATCTGCGGCTAATTTTTCATCAATTAGATGTGTTTTTGTGTCAATTCTAATTACAATTCTAATTGTTCTTCCAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAAAAGAAAACCATTTTCTTCGCGACGGAATGCTTCGTTTCCCTTTCCGTTCGTTCCCCTTCCCGTCATC

mRNA sequence

TGAAAATCTGAATTGCAAGCTTTTTTCACTTTCTCCATTTCCCCCCTCCTATTCTCTCTCCATTTGACAGATTCACAATCCCAATCAATCTACGACGCGGCTTCCACAAGAAGACGAAGAAGAAGAAGAGCAAGGAGGAGGAGAAGAAGTTTATTGTTGTTTCCTCTGCCTCAAGGAAAAATGGAGGTGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAAAAGAAAACCATTTTCTTCGCGACGGAATGCTTCGTTTCCCTTTCCGTTCGTTCCCCTTCCCGTCATC

Coding sequence (CDS)

ATGGAGGTGGAATCTCCGAATGTGGATCTTCCGACGACGGAGAAAGAAATCGTACCGGAGAAGATTGAGGATGAAGAGATCAAAGATCCTTTGTGTCATTGCGATCTTTGCGATGCGGAACTTGTGCATAAACTCGCTCAGCTTCTTCTTCCTGGATTATCCACCGCATGTGTCGATAATACGACTGGAGGTATCTTTCGAACCCCTGGCTCCGTGGCTGCCGATATGAGGAAAGAAATGGTAGATTATTTAACCTTGAGGAGCGAAACTTTTGTTGCGGAATCTGTAATCTTAGAGAATGCTCCGGATGCGGAGTTATCCGATCATCCTTACGATATCATCTCTGATTTTGTTGAAGATTTTTCTCTGTCGAAGAGAAATTTTTTTAGTAGAGTTTCAGCCTGGGTTCTGAGTGAGAAAAGAGAGGACAAGATAGACGATTTTGTTCAGGAAATGGACGTCAATGGCTTTTGGCCGCTTGACAGGAGACAAGCAATTGCTCAGGCTTTGCTTAAGAACGTAGATTTCAAGAGTGAGTATCATTGTGACAAGAAATTCCACTCTGCAGAAGAATTAGCTGAACATGTTGAAATCTGTGGGTTTAGAACATTAACTTGCACAAATGAAGGCTGCACTGCACTATTTTGTGCAAACCACACAGAACAGCATGATTCCATTTGCCCTTTCAAGATAATTCAATGTGAACAGAAGTGTTCTGCCTTTATTATGAGACGTGAAATGGATCGCCATTGCATAACTGTTTGTCCAATGAAGCTTGTGAATTGCCCCTTCCATAATATGGGTTGTCAATTCCCTGTTCCTTACTCTTTGATTGCGCAGCATTGTACAGAGAGTTTTGATTCTCATTTGCTGCACATTCTTCACTCTATTCACAAGGAAGCCAATGAAGAGACTCTTAAACATCGACGACAACAGCTTGAAGAGGCAGCATCACTTGACCACCTTAGAGGGCTTCAAAACTTGAGATTGTTAACCAAGAAAATCAAAGAAATGGAATCTGAGCTAGGACCATTGGTAATCATCGCCGAGGTTGAGGAAACAGAAGAAGCGAAGGACGCGTCTAACGAAACTGAAGAAGGGAAGGAGACGTCCAATGCAACTGAAGAAGCAAAGGATGCCTCTAATGCAACCGAAGAAAAGAAAGACGTGTCGAATGGAACCGAAGAAACAAAGGACGCATCTATTGCAGCTGAAGAAACGAAGGATGCGCCTACTGCAATTCAAGAAAGGGAAGTCGTGTCTACAGCAATCGAAGAAACAAAGGGCACTTCAGGTGAAGGAGAAGAAGCCAATGATGCTGAAAAAGAAGAAACAAAGGATGCCATTATTGCTACTGAAGAAGGGAATGCTGTGCCTACTGCAATTCATGAAAGGGATGTCGTGTCGAGCGCAATTGAAGAAACGAAGGACGTTTCGCCTAAGGAAACAGAAGAACCGAATGACGCTTCTAATGAAAAAGAAGAAGCCAATGACGCTTCAAACGAAAAAGAAGAAACCGAAGATGCATCGACTGTAATTGAAGAAACAAAGGATGGTTCTGATTCGATCGAAACGAAGAATGCTTCTGATGCAGCAGAGGAAGAGACAAAGGATGCTACGAACGCGGAGGAGGAAGAGACAACGGACGCTTCAAAGGAGGAGGAAGAAGAAGCGAAGAAGGAAACCGAAGAAAGCAAGGAGGGCGACAATGGAAGTGAAGAAAGGAAAGGTCCATCTAAAGGAATGGAAGAAAGAAAGGATTATCCAGATGAAGCTGAGAGATAA

Protein sequence

MEVESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTGGIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLSKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHSAEELAEHVEICGFRTLTCTNEGCTALFCANHTEQHDSICPFKIIQCEQKCSAFIMRREMDRHCITVCPMKLVNCPFHNMGCQFPVPYSLIAQHCTESFDSHLLHILHSIHKEANEETLKHRRQQLEEAASLDHLRGLQNLRLLTKKIKEMESELGPLVIIAEVEETEEAKDASNETEEGKETSNATEEAKDASNATEEKKDVSNGTEETKDASIAAEETKDAPTAIQEREVVSTAIEETKGTSGEGEEANDAEKEETKDAIIATEEGNAVPTAIHERDVVSSAIEETKDVSPKETEEPNDASNEKEEANDASNEKEETEDASTVIEETKDGSDSIETKNASDAAEEETKDATNAEEEETTDASKEEEEEAKKETEESKEGDNGSEERKGPSKGMEERKDYPDEAER
BLAST of Carg22474 vs. NCBI nr
Match: XP_022928672.1 (uncharacterized protein LOC111435517 isoform X1 [Cucurbita moschata])

HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0

Query: 4   ESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTG 63
           ESPNVDLPTTEKEIVPE            HCD  DAELVHKLAQLLLPGLSTACVDNTTG
Sbjct: 3   ESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTG 62

Query: 64  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 123
           GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL
Sbjct: 63  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 122

Query: 124 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 183
           SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD
Sbjct: 123 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 182

Query: 184 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 244 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
           XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 288

BLAST of Carg22474 vs. NCBI nr
Match: XP_022928673.1 (uncharacterized protein LOC111435517 isoform X2 [Cucurbita moschata])

HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0

Query: 4   ESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTG 63
           ESPNVDLPTTEKEIVPE            HCD  DAELVHKLAQLLLPGLSTACVDNTTG
Sbjct: 3   ESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTG 62

Query: 64  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 123
           GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL
Sbjct: 63  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 122

Query: 124 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 183
           SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD
Sbjct: 123 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 182

Query: 184 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 244 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
           XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 288

BLAST of Carg22474 vs. NCBI nr
Match: XP_023543547.1 (uncharacterized protein LOC111803401 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023543548.1 uncharacterized protein LOC111803401 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 443.7 bits (1140), Expect = 9.6e-121
Identity = 272/286 (95.10%), Postives = 272/286 (95.10%), Query Frame = 0

Query: 4   ESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTG 63
           ESPNVDLPTTEKEIVPE            HCD  DAELVHKLAQLLLPGLSTACVDNTTG
Sbjct: 3   ESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTG 62

Query: 64  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 123
           GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL
Sbjct: 63  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 122

Query: 124 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 183
           SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD
Sbjct: 123 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 182

Query: 184 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 244 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
           XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 288

BLAST of Carg22474 vs. NCBI nr
Match: XP_022967747.1 (uncharacterized protein LOC111467177 isoform X1 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-120
Identity = 271/285 (95.09%), Postives = 271/285 (95.09%), Query Frame = 0

Query: 4   ESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTG 63
           ESPNVDLPTTEKEIVPE            HCD  DAELVHKLAQLLLPGLSTACVDNTTG
Sbjct: 3   ESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTG 62

Query: 64  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 123
           GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL
Sbjct: 63  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 122

Query: 124 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 183
           SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD
Sbjct: 123 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 182

Query: 184 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 244 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS 289
           XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS 287

BLAST of Carg22474 vs. NCBI nr
Match: XP_022967748.1 (uncharacterized protein LOC111467177 isoform X2 [Cucurbita maxima] >XP_022967749.1 uncharacterized protein LOC111467177 isoform X3 [Cucurbita maxima])

HSP 1 Score: 441.0 bits (1133), Expect = 6.2e-120
Identity = 271/285 (95.09%), Postives = 271/285 (95.09%), Query Frame = 0

Query: 4   ESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTG 63
           ESPNVDLPTTEKEIVPE            HCD  DAELVHKLAQLLLPGLSTACVDNTTG
Sbjct: 3   ESPNVDLPTTEKEIVPEKIEDEEIKDPLCHCDLCDAELVHKLAQLLLPGLSTACVDNTTG 62

Query: 64  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 123
           GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL
Sbjct: 63  GIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSL 122

Query: 124 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 183
           SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD
Sbjct: 123 SKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCD 182

Query: 184 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 243
           KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 183 KKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXX 242

Query: 244 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS 289
           XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS
Sbjct: 243 XXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDS 287

BLAST of Carg22474 vs. TAIR10
Match: AT3G11950.1 (TRAF-like superfamily protein)

HSP 1 Score: 270.8 bits (691), Expect = 2.0e-72
Identity = 174/257 (67.70%), Postives = 207/257 (80.54%), Query Frame = 0

Query: 33  HCDXXDAELVHKLAQLLLPGLSTACVDNTTGGIFRTPGSVAADMRKEMVDYLTLRSETFV 92
           HCD  D ++VHK+AQ+ LPGL+TACVDNTTG IFR+PGSVAAD+RKEM++YLT RSETFV
Sbjct: 22  HCDLYDTQVVHKIAQVFLPGLATACVDNTTGDIFRSPGSVAADIRKEMIEYLTRRSETFV 81

Query: 93  AESVILENAPDAELSDHPYDIISDFVEDFSLSKRNFFSRVSAWVLSEKREDKIDDFVQEM 152
           AE ++L+   + E S  P+DIISDF++DF+ SKRN FSRVS W+LSE+RED IDDF QEM
Sbjct: 82  AEHIVLQGGSEIEASHDPFDIISDFIDDFATSKRNLFSRVSGWMLSERREDNIDDFAQEM 141

Query: 153 DVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHSAEELAEHVEICGFRTLTCTNEGCT 212
           +++GFW  D R+ IAQ LLKNVDFKS  HC+ KF +  ELAEH   CG+RT+ C NEGCT
Sbjct: 142 EISGFWLTDHREGIAQTLLKNVDFKSSAHCEMKFQTEGELAEHAMNCGYRTMNCENEGCT 201

Query: 213 ALFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHNMGCQFP 272
           A+FC   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFH++GC   
Sbjct: 202 AVFCANQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFHSVGCLSD 261

Query: 273 VPYSLIAQHCTESFDSH 290
           V    + QH  ++  SH
Sbjct: 262 VHQCEVQQHHLDNVSSH 278

BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A1S3B4U5|A0A1S3B4U5_CUCME (glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103486171 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 2.2e-105
Identity = 192/289 (66.44%), Postives = 214/289 (74.05%), Query Frame = 0

Query: 1   MEVESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDN 60
           M+ ESPNVDLPTT+KEIVPE            HC+  DAE+VHKLAQ+LLPGLSTACVDN
Sbjct: 1   MDAESPNVDLPTTDKEIVPEKIEDEEIKEPFIHCELCDAEIVHKLAQVLLPGLSTACVDN 60

Query: 61  TTGGIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVED 120
           T+G IFRTPGSVAAD+RKEMVDYLT+RSET VAESVIL+N  +AE+SDHPYDI+SDFV+D
Sbjct: 61  TSGDIFRTPGSVAADIRKEMVDYLTMRSETCVAESVILDNPSEAEVSDHPYDIVSDFVDD 120

Query: 121 FSLSKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEY 180
           F+ +KRN FSRVS W+LSEKREDKIDDFVQEMDVNGFWPLDRR+AIAQ LLKNVDFKSE+
Sbjct: 121 FAATKRNLFSRVSGWILSEKREDKIDDFVQEMDVNGFWPLDRREAIAQTLLKNVDFKSEF 180

Query: 181 HCDKKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXX 240
           HCDKKFHS EELAEHVE CGFR+LTCTNEGCT+ FC                        
Sbjct: 181 HCDKKFHSVEELAEHVENCGFRSLTCTNEGCTSRFCASHAEQHDSICPFKIILCEQKCSA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
                                  FHN+GCQ PVPY LIAQHC+ESFDSH
Sbjct: 241 FIMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYCLIAQHCSESFDSH 289

BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A0A0L1F8|A0A0A0L1F8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572340 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.9e-105
Identity = 193/289 (66.78%), Postives = 213/289 (73.70%), Query Frame = 0

Query: 1   MEVESPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDN 60
           M+ ESPNVDLPTT+KEI+PE            HC+  DAE+VHKLAQ+LLPGLSTACVDN
Sbjct: 1   MDAESPNVDLPTTDKEIIPEKIEDEEIKEPFIHCELCDAEIVHKLAQVLLPGLSTACVDN 60

Query: 61  TTGGIFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVED 120
           T+G IFRTPGSVAAD+RKEMVDYLT+RSET VAESVIL+N  +AE+SDHPYDIISDFV+D
Sbjct: 61  TSGDIFRTPGSVAADIRKEMVDYLTMRSETCVAESVILDNPSEAEVSDHPYDIISDFVDD 120

Query: 121 FSLSKRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEY 180
           FS +KRN FSRVS W+LSEKREDKIDDFVQEMDVNGFWPLDRR+AIAQ LLKNVDFKSE+
Sbjct: 121 FSATKRNLFSRVSGWILSEKREDKIDDFVQEMDVNGFWPLDRREAIAQTLLKNVDFKSEF 180

Query: 181 HCDKKFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXX 240
           HCDKKFHS EELA HVE CGFR+LTCTNEGCTA FC                        
Sbjct: 181 HCDKKFHSVEELAGHVENCGFRSLTCTNEGCTARFCASHAEQHDSICPFKIILCEQKCSA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
                                  FHN+GCQ PVPY LIAQHC+ESFDSH
Sbjct: 241 FIMRREMDRHCITVCPMKLVNCPFHNLGCQSPVPYCLIAQHCSESFDSH 289

BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A251QD79|A0A251QD79_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G061200 PE=4 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 5.4e-80
Identity = 189/281 (67.26%), Postives = 226/281 (80.43%), Query Frame = 0

Query: 9   DLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTGGIFRT 68
           DLP +  E+ PE            HCD  D ELVHK+AQ+ +PGL+TACVDNT+G IF T
Sbjct: 10  DLPASNVELEPERIEDGKDGGPAFHCDLYDTELVHKIAQVFIPGLATACVDNTSGDIFWT 69

Query: 69  PGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLSKRNF 128
           P SVAAD+RKEMV+Y+T RSE FVAESVILE+  DA++SDHPYDIISDFV+DF+ SKRN 
Sbjct: 70  PASVAADVRKEMVEYITQRSENFVAESVILEDGADAQVSDHPYDIISDFVDDFASSKRNL 129

Query: 129 FSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFHS 188
           FSRVS W+LSEKREDKIDDFVQEM++NGFW LDRR+ IAQ+LLKNVDFK+E+HC+ KF+S
Sbjct: 130 FSRVSGWLLSEKREDKIDDFVQEMEINGFWLLDRRETIAQSLLKNVDFKNEHHCNMKFNS 189

Query: 189 AEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 248
             ELAEH+  C FR++TCTN+GC+ +FC      XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 190 PVELAEHISNCNFRSMTCTNQGCSTVFCASHKEKXXXXXXXXXXXXXXXXXXXXXXXXXX 249

Query: 249 XXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
           XXXXXXXXXXXXXX F+ +GCQ P+P+  + QH ++   SH
Sbjct: 250 XXXXXXXXXXXXXXPFYAVGCQSPIPHCKVEQHNSDDLHSH 290

BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A2P5EA32|A0A2P5EA32_9ROSA (TRAF-like OS=Trema orientalis OX=63057 GN=TorRG33x02_217850 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 3.5e-79
Identity = 191/285 (67.02%), Postives = 225/285 (78.95%), Query Frame = 0

Query: 5   SPNVDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTGG 64
           S  +D+P T  E  PE            HC+  D ELVHK+AQ  LPG++TACVDNT+G 
Sbjct: 4   SSGMDIPATNTEHKPEKIEDGKEGVSLFHCNLYDTELVHKIAQAFLPGIATACVDNTSGE 63

Query: 65  IFRTPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLS 124
           IF+TP SVA ++RKEMVDY+T RSE FVAE+ ILE   D E+SDHPYDIISDFV+DF+  
Sbjct: 64  IFKTPASVAVELRKEMVDYITQRSENFVAETFILEGGTDVEVSDHPYDIISDFVDDFASL 123

Query: 125 KRNFFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDK 184
           KRN FSRVS W+LSEKREDKIDDFVQEM++NGFW  D+R+AIAQALLKNVDFK++YHC  
Sbjct: 124 KRNLFSRVSGWLLSEKREDKIDDFVQEMEINGFWLNDKREAIAQALLKNVDFKNKYHCSM 183

Query: 185 KFHSAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
           KF SAEELAEHV  CGFR++TC NEGC A+F      XXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 184 KFDSAEELAEHVGSCGFRSMTCENEGCNAMFSSRHREXXXXXXXXXXXXXXXXXXXXXXX 243

Query: 245 XXXXXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
           XXXXXXXXXXXXXXXXXX F+++GCQ P+P+S++ QH + +  SH
Sbjct: 244 XXXXXXXXXXXXXXXXXXPFYSVGCQSPIPHSMLEQHRSSAVHSH 288

BLAST of Carg22474 vs. TrEMBL
Match: tr|A0A2N9H558|A0A2N9H558_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23888 PE=4 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 6.0e-79
Identity = 151/282 (53.55%), Postives = 183/282 (64.89%), Query Frame = 0

Query: 8   VDLPTTEKEIVPEXXXXXXXXXXXXHCDXXDAELVHKLAQLLLPGLSTACVDNTTGGIFR 67
           +D P  + E+VPE             CD  D E+VHK+AQ+ LPGL TACVDNTTG +FR
Sbjct: 1   MDFPANDVELVPEKIDDEKEGGPSFKCDLADTEIVHKIAQVFLPGLGTACVDNTTGDVFR 60

Query: 68  TPGSVAADMRKEMVDYLTLRSETFVAESVILENAPDAELSDHPYDIISDFVEDFSLSKRN 127
           +P SVA DMRKEMVDYLT RSETFVAESVILE A + E+SDHPYDIISDFV+DF+ SKRN
Sbjct: 61  SPASVAVDMRKEMVDYLTQRSETFVAESVILEGASETEVSDHPYDIISDFVDDFASSKRN 120

Query: 128 FFSRVSAWVLSEKREDKIDDFVQEMDVNGFWPLDRRQAIAQALLKNVDFKSEYHCDKKFH 187
            FSRVS W+LSEKREDKI+DFVQEM++NGFW LD R+ IA+ LLKNVDFK+ +HC+ KF+
Sbjct: 121 LFSRVSGWLLSEKREDKIEDFVQEMEINGFWLLDGREVIAETLLKNVDFKNAFHCNMKFN 180

Query: 188 SAEELAEHVEICGFRTLTCTNEGCTALFCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 247
           SAEELAEHV  C FR+LTC NEGC A FC                               
Sbjct: 181 SAEELAEHVCHCSFRSLTCKNEGCNARFCASHLEKHDSACPFKIIPCEQKCLDNIMRREM 240

Query: 248 XXXXXXXXXXXXXXXXFHNMGCQFPVPYSLIAQHCTESFDSH 290
                           F+ +GCQ  +P+ +I +H +++  SH
Sbjct: 241 DKHCITVCRMKLVNCPFYAVGCQSTIPHCMIEKHFSDTSHSH 282

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022928672.19.6e-12195.10uncharacterized protein LOC111435517 isoform X1 [Cucurbita moschata][more]
XP_022928673.19.6e-12195.10uncharacterized protein LOC111435517 isoform X2 [Cucurbita moschata][more]
XP_023543547.19.6e-12195.10uncharacterized protein LOC111803401 isoform X1 [Cucurbita pepo subsp. pepo] >XP... [more]
XP_022967747.16.2e-12095.09uncharacterized protein LOC111467177 isoform X1 [Cucurbita maxima][more]
XP_022967748.16.2e-12095.09uncharacterized protein LOC111467177 isoform X2 [Cucurbita maxima] >XP_022967749... [more]
Match NameE-valueIdentityDescription
AT3G11950.12.0e-7267.70TRAF-like superfamily protein[more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
tr|A0A1S3B4U5|A0A1S3B4U5_CUCME2.2e-10566.44glutamic acid-rich protein OS=Cucumis melo OX=3656 GN=LOC103486171 PE=4 SV=1[more]
tr|A0A0A0L1F8|A0A0A0L1F8_CUCSA2.9e-10566.78Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G572340 PE=4 SV=1[more]
tr|A0A251QD79|A0A251QD79_PRUPE5.4e-8067.26Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G061200 PE=4 SV=1[more]
tr|A0A2P5EA32|A0A2P5EA32_9ROSA3.5e-7967.02TRAF-like OS=Trema orientalis OX=63057 GN=TorRG33x02_217850 PE=4 SV=1[more]
tr|A0A2N9H558|A0A2N9H558_FAGSY6.0e-7953.55Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS23888 PE=4 SV=1[more]
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0008270zinc ion binding
Vocabulary: INTERPRO
TermDefinition
IPR008974TRAF-like
IPR001293Znf_TRAF
IPR013083Znf_RING/FYVE/PHD
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005515 protein binding
molecular_function GO:0008270 zinc ion binding

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22474-RACarg22474-RAmRNA


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 525..564
NoneNo IPR availableCOILSCoilCoilcoord: 489..509
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..413
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 467..536
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 553..594
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 429..450
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 537..552
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 353..594
NoneNo IPR availablePANTHERPTHR10131:SF112SUBFAMILY NOT NAMEDcoord: 29..342
NoneNo IPR availablePANTHERPTHR10131TNF RECEPTOR ASSOCIATED FACTORcoord: 29..342
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3DG3DSA:3.30.40.10coord: 222..287
e-value: 2.0E-8
score: 36.4
IPR001293Zinc finger, TRAF-typePFAMPF02176zf-TRAFcoord: 223..281
e-value: 3.8E-10
score: 40.2
IPR001293Zinc finger, TRAF-typePROSITEPS50145ZF_TRAFcoord: 223..274
score: 12.412
IPR008974TRAF-likeSUPERFAMILYSSF49599TRAF domain-likecoord: 238..291