Carg22378 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22378
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Golgin family A protein
Location	Cucurbita_argyrosperma_scaffold_155 : 108359 .. 111135 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGGAATTGGATCCAGATTGGGCCGAGTCTCCTCCCGCTACGGTCCGGCCGCTACTGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTCTTGGCTTCTTCCTCCTCCTCCGGTGTTGCTAATCAGTCCTCTTCTCACTCCCAATCCAATGCTCAGAAACTTCTTCTCTGCCGTTGGACTCCGATTCCTCCGCCTACTTCCTCGGAAGACGACGGAGCCGCCGCGCGGCCCGATGAGCCGCCCAGACGGAAGTTCCGTTACACTCCTGTAAGTCTGAACAACTATCCGAATTCTTAAGTGAGTTTGCGATTGCGTTTGCGGTTGTTGAATGTGAATTGGTTTTGACCTAGGGAGTGTCGCTGATTTCTGAGGGAAATTAAGTGAGGGTTTTTTGAAGTTCTTAATCAATCTCGTATGTTGTTGATTTTTTAAGAACGATGCAATTCTCCGAACTGGTTTATAATATTGCTTCTGATTTCTAGTTACTGAGTATAGCATTCTCTTCGTTTTTGTATAATTTATCTTCTGAATTGATTAGAGTATAGGTCTTTTCATTGTTGCCTGTTCTTCTAGATTAGAATTTAACTACGAGCAAATAATTTAGCTGTGTTTGGTTGTGATGTGCAGATTGCTGTGCTGGAGGAACAGAGAAATGCAGAATTGAGAAGTGTTAGAGATGAAATTAGAACAAAAGAAATGGATCAGTCTGCAGCAAAGACAGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGATTTTCAAGGAAGAATCTCAGGTAACTGACTGATTTCACCTTGGTTTGTTTATTGTTTTCTTGTTCTTGTTCTTGCTCTCTGTCAATGGCTGCCTTCTTGGTGATTTCTGATATTGATTGTTGTTCTGTGTTTGGCTGGATTGACTAGATGTCTAGATCTTTTCAAGAATTTACTATTCCTTACACATGATTGGAAGATATAGTTCACATTGTAATTGACCAGGCACAAGTATAACATGGTGTTGAGGAATCTTTTATGTTAATTGAAATGGTTACATGGTCATGTTGTTTATCAACAAACAATTAAGAACATGTAACTAGGTGTTTCTTTTTTGGCTTCTCGAGTTTGTAACAGTGAAATCTCATATTCAAGGCAAATACAGGACGGTCAAATAGTATGATGAGAATAGCTTAGCGCATAGACGGTCAAATAGTTGTCTGATGAGAATAGTTAGAGCGCATGGACAGTCAAATAGTTGTCTGATGAGAATAGTTAGAGCGCATGGACGGTCAAATAGTTGTCTGATGAGAATAGTTAGAGCGCATGGACGGTCAAATAGTTGTCTGATGAGAATAGTTAGAGCGCATGGACAGTGAAATAGTTGTCTGATGAGAATAGTTAGAGCGTATGGACAGTCAAATAGTTGTCTGATGAGAATAGTTAGAGCGCATGGACGGTCAAATAGTTGTCTGATGAGAATGGTTGAGCGTATGGACGGTCAAATAGTTGTCTGATGAGAATAGTTGAGCGCATGGACGATCAAATAGTTGTCTGGTGAGAATAGTTGAGCGCATAGACGGTCAAATAGTTGTCTGATGAGAATAGTTGTGGTGCGCTCAAGCTAGCTCCGGTGCTCACAAATATACCTAAAGATTAAAAAAAAAAACTCGTATTCAAGGTTCGGTGAAACATGAGTTGGTTGATTGGCACCAAGTACATGGAAATATTGTAGGAGAGAAGAACTTTTTTTTACAGAACCAGATTTCTCTTTTTCATTCTGATCTCAGGGAACCTTGAGCAATGAGCAGTTGGTCGAATAGAAGCAATTCTTTACATACCGCCATGGCAGACTCTAGGGATAAGTCATCAATTCACATACTCATGAACTATGACATAGTTTTCCAGATTAGCATAATCATAGAAAAGTTGTAGATTCTTCTCAAGAACTTGATGAACCGGACACATTCTCTTCGCAGGAAAAGGGCAAGATTCTAAACAGCCTGCATGATGTAGGCAAGAACAATTTAGATTTGGCGTTGTGCTTGAACGGTCAGAACCAAGATTCTGCTGGTAAGAGCTCTTAGTATCTGCGAACAAGACCGAGCTCGAGCTGGTTTTGTCGTATGGGAATGGCATAGCAGAAATTAGTCTGTAATGTGATAGTATCTCATCCAATGGTTAACTTGGAAGCACAATATTTGTAGTTAGTGTATGTATATGATTTAGGGCTAATGGGGGATGGATCAGTATATAATCTGGATGAACCTTTTGGGAATTTGTTTGTGGAAAGTGTATTTATTCTTCCTGAATAATGTGCAATCAGAATGCTGTAGGAAGAACAAATTGTGTTCTTGACAATGTTTTCATTACATCATCGACCATCACATTTGTTGATCTTGTTTTTTTTGTTCTTCGTTCTGTTGTTTAGAAACATAAACTTGAGCTCCATAGCAGTATCTATGTCTTCAGACATCATTCGCCGAGTTATTTTCCAATGCTCGAGTTACACCGACCGACTTCGGTTGGCCGAAGAACTCGTATAGCATTATACCTAGACTGTCATAGAGAACATGAGAAAATCATATCATCTCAACAACCAATGCAGTGTCTGTACCATACCAAACTGTTATACTGTACTAGTTTAGAAGCAGTATTTGCTAATGTATTAGTCAAAGATACAAGTTCGGTTAGAGTCAGGCAAGTACGAGAAGCTTTCTTTGTTCCCGTTCATGCTATTAATTTCAATCTCCATCCCCACAAAATTTCTCACTTATTTTTG

mRNA sequence

ATGGAGGGAATTGGATCCAGATTGGGCCGAGTCTCCTCCCGCTACGGTCCGGCCGCTACTGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTCTTGGCTTCTTCCTCCTCCTCCGGTGTTGCTAATCAGTCCTCTTCTCACTCCCAATCCAATGCTCAGAAACTTCTTCTCTGCCGTTGGACTCCGATTCCTCCGCCTACTTCCTCGGAAGACGACGGAGCCGCCGCGCGGCCCGATGAGCCGCCCAGACGGAAGTTCCGTTACACTCCTATTGCTGTGCTGGAGGAACAGAGAAATGCAGAATTGAGAAGTGTTAGAGATGAAATTAGAACAAAAGAAATGGATCAGTCTGCAGCAAAGACAGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGATTTTCAAGGAAGAATCTCAGGAAAAGGGCAAGATTCTAAACAGCCTGCATGATGTAGGCAAGAACAATTTAGATTTGGCGTTGTGCTTGAACGGTCAGAACCAAGATTCTGCTGGTAAGAGCTCTTAGTATCTGCGAACAAGACCGAGCTCGAGCTGGTTTTGTCGTATGGGAATGGCATAGCAGAAATTAGTCTGTAATGTGATAGTATCTCATCCAATGGTTAACTTGGAAGCACAATATTTGTAGTTAGTGTATGTATATGATTTAGGGCTAATGGGGGATGGATCAGTATATAATCTGGATGAACCTTTTGGGAATTTGTTTGTGGAAAGTGTATTTATTCTTCCTGAATAATGTGCAATCAGAATGCTGTAGGAAGAACAAATTGTGTTCTTGACAATGTTTTCATTACATCATCGACCATCACATTTGTTGATCTTGTTTTTTTTGTTCTTCGTTCTGTTGTTTAGAAACATAAACTTGAGCTCCATAGCAGTATCTATGTCTTCAGACATCATTCGCCGAGTTATTTTCCAATGCTCGAGTTACACCGACCGACTTCGGTTGGCCGAAGAACTCGTATAGCATTATACCTAGACTGTCATAGAGAACATGAGAAAATCATATCATCTCAACAACCAATGCAGTGTCTGTACCATACCAAACTGTTATACTGTACTAGTTTAGAAGCAGTATTTGCTAATGTATTAGTCAAAGATACAAGTTCGGTTAGAGTCAGGCAAGTACGAGAAGCTTTCTTTGTTCCCGTTCATGCTATTAATTTCAATCTCCATCCCCACAAAATTTCTCACTTATTTTTG

Coding sequence (CDS)

ATGGAGGGAATTGGATCCAGATTGGGCCGAGTCTCCTCCCGCTACGGTCCGGCCGCTACTGTCTTCAACGGCCCCGTCCGGAAGTGGAAGAAGAAGTGGGTCTTGGCTTCTTCCTCCTCCTCCGGTGTTGCTAATCAGTCCTCTTCTCACTCCCAATCCAATGCTCAGAAACTTCTTCTCTGCCGTTGGACTCCGATTCCTCCGCCTACTTCCTCGGAAGACGACGGAGCCGCCGCGCGGCCCGATGAGCCGCCCAGACGGAAGTTCCGTTACACTCCTATTGCTGTGCTGGAGGAACAGAGAAATGCAGAATTGAGAAGTGTTAGAGATGAAATTAGAACAAAAGAAATGGATCAGTCTGCAGCAAAGACAGCTACTGTGAGCAATGAGGCTCAGGGAGAGCTAAATGTCAATGAGATTTTCAAGGAAGAATCTCAGGAAAAGGGCAAGATTCTAAACAGCCTGCATGATGTAGGCAAGAACAATTTAGATTTGGCGTTGTGCTTGAACGGTCAGAACCAAGATTCTGCTGGTAAGAGCTCTTAG

Protein sequence

MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGVANQSSSHSQSNAQKLLLCRWTPIPPPTSSEDDGAAARPDEPPRRKFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQSAAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQDSAGKSS

Homology

[Close]

BLAST of Carg22378 vs. NCBI nr
Match: XP_022940151.1 (uncharacterized protein LOC111445863 isoform X1 [Cucurbita moschata])

HSP 1 Score: 222.2 bits (565), Expect = 1.4e-54
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKW XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQDSAGKS 180
           AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGK+NLDLALCLNGQNQDSAGKS
Sbjct: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKSNLDLALCLNGQNQDSAGKS 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of Carg22378 vs. NCBI nr
Match: XP_023523404.1 (uncharacterized protein LOC111787619 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 221.9 bits (564), Expect = 1.8e-54
Identity = 178/181 (98.34%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKW XXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELR+V+DEIRTKEMDQS
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRNVKDEIRTKEMDQS 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQDSAGKS 180
           AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQDSAGKS
Sbjct: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQDSAGKS 180

Query: 181 S 182
           S
Sbjct: 181 S 181

[Close]

BLAST of Carg22378 vs. NCBI nr
Match: XP_022936275.1 (uncharacterized protein LOC111442943 [Cucurbita moschata])

HSP 1 Score: 190.3 bits (482), Expect = 5.8e-45
Identity = 117/183 (63.93%), Postives = 125/183 (68.31%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGR SSRYGPAATVFNGPVR+WKKKWV                          
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                            XXXXXXXX   FRYTPIAVLEEQ+NA LRSV+DE+R KEMDQS
Sbjct: 61  CRWTPIHPSTSSEADGAXXXXXXXXRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKEMDQS 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQN--QDSAG 180
           A+KTATV NEAQGELNVNE+FKEE+QE  KILNS  D  +NNLDLALCLNGQN  QDSAG
Sbjct: 121 ASKTATVGNEAQGELNVNEVFKEETQETSKILNSPRDGNRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 182
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of Carg22378 vs. NCBI nr
Match: XP_023536003.1 (uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 188.0 bits (476), Expect = 2.9e-44
Identity = 107/183 (58.47%), Postives = 117/183 (63.93%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGR SSRYGPAATVFNGPVR+WKKKWV                          
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAQKLLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                                       FRYTPIAVLEEQ+NA LRSV+DE+R KEMDQS
Sbjct: 61  CRWTPIHPSTSSEADGTAAPPEEPPRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKEMDQS 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQN--QDSAG 180
           A+KTATV N+AQG+LNVNE+FKEE+QE  KILNS  D  +NNLDLALCLNGQN  QDSAG
Sbjct: 121 ASKTATVGNDAQGDLNVNEVFKEETQETSKILNSPRDGNRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 182
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of Carg22378 vs. NCBI nr
Match: XP_022976368.1 (uncharacterized protein LOC111476793 [Cucurbita maxima])

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 114/183 (62.30%), Postives = 122/183 (66.67%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGR SSRYGPAATVFNGPVR+WKKKWV                          
Sbjct: 1   MEGIGSRLGRASSRYGPAATVFNGPVRRWKKKWVLASSSSSGVNYQTSSQSQSNAHKLLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                             XXXXXXX   FRYTPIAVLEEQ+NA LRSV+DE+R KE DQS
Sbjct: 61  CRWTPIHPSTSSEADGAAXXXXXXXRRKFRYTPIAVLEEQKNAGLRSVKDEVRVKETDQS 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQN--QDSAG 180
           A+K ATV NEAQGELNVNE+FKEE+QE  KILNS  D  +NNLDLALCLNGQN  QDSAG
Sbjct: 121 ASKMATVGNEAQGELNVNEVFKEETQETSKILNSPRDGDRNNLDLALCLNGQNPKQDSAG 180

Query: 181 KSS 182
           KSS
Sbjct: 181 KSS 183

[Close]

BLAST of Carg22378 vs. TAIR10
Match: AT4G22320.1 (unknown protein)

HSP 1 Score: 62.0 bits (149), Expect = 4.4e-10
Identity = 28/34 (82.35%), Postives = 31/34 (91.18%), Query Frame = 0


Query: 1  MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWV 35
          MEG+G+RLGR S+RYGP ATVF GPVRKWKKKWV
Sbjct: 1  MEGVGARLGRSSTRYGP-ATVFTGPVRKWKKKWV 33

[Close]

BLAST of Carg22378 vs. TAIR10
Match: AT5G55210.1 (unknown protein)

HSP 1 Score: 56.6 bits (135), Expect = 1.8e-08
Identity = 29/36 (80.56%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 1  MEGIGSRLGRVSSRY-GPAAT-VFNGPVRKWKKKWV 35
          MEG+GSRL R SSRY GPAAT VF+G VRKWKKKWV
Sbjct: 1  MEGVGSRLSRTSSRYSGPAATAVFSGRVRKWKKKWV 36

[Close]

BLAST of Carg22378 vs. TrEMBL
Match: tr|A0A0A0K8E5|A0A0A0K8E5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 3.6e-43
Identity = 108/182 (59.34%), Postives = 114/182 (62.64%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWV                          
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                                       FRYTPIAVLEEQ++AELRSV+DE+R KEMDQ 
Sbjct: 61  CRWTPIHPPTSSEADEATAPPDEPPKRKFRYTPIAVLEEQKSAELRSVKDEVRMKEMDQL 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQN--QDSAG 180
           AAKTATV NEA GELNVNEIFKEE+QE  K LNS  D  +NNLDLALCLNGQ   QDSAG
Sbjct: 121 AAKTATVGNEALGELNVNEIFKEETQETSKNLNSPRDGSRNNLDLALCLNGQKKVQDSAG 180

[Close]

BLAST of Carg22378 vs. TrEMBL
Match: tr|A0A1S3BHG2|A0A1S3BHG2_CUCME (uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=4 SV=1)

HSP 1 Score: 176.0 bits (445), Expect = 7.5e-41
Identity = 114/184 (61.96%), Postives = 121/184 (65.76%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWV                          
Sbjct: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVLASSSSSGLNYQTSSHSQSNAQKLLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                            XXXXXXXX   FRYTPIAVLEEQ++AE RSV+DE+R KEMDQ 
Sbjct: 61  CRWTPIHPPTSSEADETXXXXXXXXKRKFRYTPIAVLEEQKSAETRSVKDEVRMKEMDQL 120

Query: 121 AAKT-ATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQN--QDSA 180
           AAKT A V NEA GELNVNE+FKEE+QE  K LNS  D  +NNLDLALCLNGQ   QDSA
Sbjct: 121 AAKTAAAVGNEALGELNVNEVFKEETQETSKNLNSPRDGSRNNLDLALCLNGQKKVQDSA 180

Query: 181 GKSS 182
           GKSS
Sbjct: 181 GKSS 184

[Close]

BLAST of Carg22378 vs. TrEMBL
Match: tr|A0A2P5AS72|A0A2P5AS72_PARAD (Golgin family A protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305610 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 1.8e-18
Identity = 115/195 (58.97%), Postives = 130/195 (66.67%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWV--------------------XXXXXX 60
           MEG+GSRLGR SSRYGPAATVFNGPVRKWKKKWV                    XXXXXX
Sbjct: 1   MEGVGSRLGRASSRYGPAATVFNGPVRKWKKKWVHXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQ 120
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          FRYTPIAVLEEQ
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQLDEPPRRKFRYTPIAVLEEQ 120

Query: 121 RNAELRSVRDEIRTKEMDQSAAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGK 176
           +    + V DE +T EMD S A + T+S+E  G+ ++N+  KEE++   +  N       
Sbjct: 121 KKVAEKKVEDEEKTNEMDLSTAGSTTMSDEMNGKPDINDALKEETEVVMEEDNGSPGSDI 180

[Close]

BLAST of Carg22378 vs. TrEMBL
Match: tr|A0A2P5F266|A0A2P5F266_9ROSA (Golgin family A protein OS=Trema orientalis OX=63057 GN=TorRG33x02_122170 PE=4 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 2.4e-18
Identity = 101/197 (51.27%), Postives = 116/197 (58.88%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWV----------------------XXXX 60
           MEG+GSRLGR SSRYGPAATVFNGPVRKWKKKWV                      XXXX
Sbjct: 1   MEGVGSRLGRASSRYGPAATVFNGPVRKWKKKWVHXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLE 120
           XXXXXXXXXXXXXXX             XXXXXXXXXXX           FRYTPIAVLE
Sbjct: 61  XXXXXXXXXXXXXXXRWTPLPPTTAADGXXXXXXXXXXXGAQLDEPPRRKFRYTPIAVLE 120

Query: 121 EQRNAELRSVRDEIRTKEMDQSAAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDV 176
           EQ+    + V DE +T EMD S A + T+S+E  G+ ++N+  KEE++   +  N     
Sbjct: 121 EQKKVAEKKVEDEEKTNEMDLSTAGSTTMSDEMNGKPDINDALKEETEVVMEENNGSPGS 180

[Close]

BLAST of Carg22378 vs. TrEMBL
Match: tr|A0A2I4EZ63|A0A2I4EZ63_9ROSI (uncharacterized protein LOC108994061 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994061 PE=4 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.7e-16
Identity = 66/182 (36.26%), Postives = 84/182 (46.15%), Query Frame = 0


Query: 1   MEGIGSRLGRVSSRYGPAATVFNGPVRKWKKKWVXXXXXXXXXXXXXXXXXXXXXXXXXX 60
           MEG+GSRLGR SSRYGP+ATVF+GPVRKWKKKWV                          
Sbjct: 1   MEGVGSRLGRASSRYGPSATVFSGPVRKWKKKWV---HVSQSRFNYHSSHSQSNGSSRLL 60

Query: 61  XXXXXXXXXXXXXXXXXXXXXXXXXXXXFRYTPIAVLEEQRNAELRSVRDEIRTKEMDQS 120
                                       FRYTPIAVLEEQ+ A ++   DE    + D  
Sbjct: 61  LCRWTPISPSTVSETTSAGSADEPPRRKFRYTPIAVLEEQKKAYIKHAEDEGNKIQTDHY 120

Query: 121 AAKTATVSNEAQGELNVNEIFKEESQEKGKILNSLHDVGKNNLDLALCLNGQNQ--DSAG 180
                        +LN++E+ K+E+QE    +  L D   ++LDL LCL G N   DS G
Sbjct: 121 L------------KLNIDEVPKKETQESDNNILGLQDSNISHLDLGLCLKGHNSNVDSVG 167

The following BLAST results are available for this feature:

BLAST of Carg22378 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022940151.1	1.4e-54	98.90	uncharacterized protein LOC111445863 isoform X1 [Cucurbita moschata]	[more]
XP_023523404.1	1.8e-54	98.34	uncharacterized protein LOC111787619 [Cucurbita pepo subsp. pepo]	[more]
XP_022936275.1	5.8e-45	63.93	uncharacterized protein LOC111442943 [Cucurbita moschata]	[more]
XP_023536003.1	2.9e-44	58.47	uncharacterized protein LOC111797276 [Cucurbita pepo subsp. pepo]	[more]
XP_022976368.1	1.9e-43	62.30	uncharacterized protein LOC111476793 [Cucurbita maxima]	[more]

BLAST of Carg22378 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G22320.1	4.4e-10	82.35	unknown protein	[more]
AT5G55210.1	1.8e-08	80.56	unknown protein	[more]

BLAST of Carg22378 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22378 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K8E5\|A0A0A0K8E5_CUCSA	3.6e-43	59.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G145940 PE=4 SV=1	[more]
tr\|A0A1S3BHG2\|A0A1S3BHG2_CUCME	7.5e-41	61.96	uncharacterized protein LOC103490123 OS=Cucumis melo OX=3656 GN=LOC103490123 PE=...	[more]
tr\|A0A2P5AS72\|A0A2P5AS72_PARAD	1.8e-18	58.97	Golgin family A protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_305610 PE...	[more]
tr\|A0A2P5F266\|A0A2P5F266_9ROSA	2.4e-18	51.27	Golgin family A protein OS=Trema orientalis OX=63057 GN=TorRG33x02_122170 PE=4 S...	[more]
tr\|A0A2I4EZ63\|A0A2I4EZ63_9ROSI	1.7e-16	36.26	uncharacterized protein LOC108994061 isoform X1 OS=Juglans regia OX=51240 GN=LOC...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22378-RA	Carg22378-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 76..92
None	No IPR available	PANTHER	PTHR34572	FAMILY NOT NAMED	coord: 1..177
None	No IPR available	PANTHER	PTHR34572:SF3	SUBFAMILY NOT NAMED	coord: 1..177

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22378	Cla016300	Watermelon (97103) v1	carwmB0887
Carg22378	Csa7G145940	Cucumber (Chinese Long) v2	carcuB0900
Carg22378	MELO3C013128	Melon (DHL92) v3.5.1	carmeB0872
Carg22378	ClCG09G011070	Watermelon (Charleston Gray)	carwcgB0860
Carg22378	CSPI07G08630	Wild cucumber (PI 183967)	carcpiB0920
Carg22378	CmaCh09G009700	Cucurbita maxima (Rimu)	carcmaB1223
Carg22378	CmoCh09G009700	Cucurbita moschata (Rifu)	carcmoB1193
Carg22378	CmoCh01G011600	Cucurbita moschata (Rifu)	carcmoB1194
Carg22378	Lsi02G018810	Bottle gourd (USVL1VR-Ls)	carlsiB802
Carg22378	Cp4.1LG02g00720	Cucurbita pepo (Zucchini)	carcpeB1232
Carg22378	Cp4.1LG06g08710	Cucurbita pepo (Zucchini)	carcpeB1233
Carg22378	CsGy7G008580	Cucumber (Gy14) v2	carcgybB0872
Carg22378	MELO3C013128.2	Melon (DHL92) v3.6.1	carmedB0880
Carg22378	CsaV3_7G019960	Cucumber (Chinese Long) v3	carcucB0923
Carg22378	Cla97C09G173770	Watermelon (97103) v2	carwmbB0923
Carg22378	Bhi09G001413	Wax gourd	carwgoB1030

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22378	Carg12838	Silver-seed gourd	carcarB638

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22378	Cucumber (Gy14) v2	carcgybB0873
Carg22378	Cucurbita maxima (Rimu)	carcmaB1224
Carg22378	Cucumber (Chinese Long) v3	carcucB0924
Carg22378	Watermelon (97103) v2	carwmbB0922