Carg22360 (gene) Silver-seed gourd

Overview
NameCarg22360
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionsyntaxin-51-like
LocationCucurbita_argyrosperma_scaffold_091 : 725925 .. 727569 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGGGTCTCACACTATTTTTTCTAAGTCCAAGTTTGTTCTTTCTTGTGGTTTGCAGGTCCGAAAAGGAGATAAATCGACGAAAGGACATGCTTGCTCAGATGAGATCAAAAGTAAACCAGATGGCCTCAACGCTGAACATGTCAAACTTCGCTAACCGCAACAGTTTGCTTGGCCCCGATATGAAATCAGCGGATGTAATGAGCAAAACAGCTGAACTAGACAACCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGGTAAGTTTTTGTGACAACTCTACTTTCAACATATTATATACTTCCTTGTATCCCTTTTGGGTCTTCTCTGATATGATTTTGAAACAGAGCAAGATGAAGGTCTTGAAAAGTTGGAGGAGACTATAAGAAGTACAAAACATATTGCTTTGGCAGTTAATGAAGAACTCGATCTTCATACTCGCCTAATTGTACGTATGATTTCTTGTTTTCTTTATGCATGCTGTAAGAGTTCATTCCATGTTGTCTACGTTTAGTTTTACATGTCATCTAATCATACTTTTCTCTGCAGGATGACTTAGACCAGCATGTCGATGTTACAGACTCTCGATTAGCGGTAAAATCCTCTCTTACTATTCATTTTTGGCTTTAGATATCTCTAGGATGTAGGGCTAATTCATCACTAGTTGAAATAGATATGGTAATATTCGTGTTATTGTTGCCTCTTTTACAACAATGACAAGAAAAATTGGTTAATTAATCTGGGAGCTTCACAGAATATGAAACTGACTGTTGTAGAAAATATTCAACTGTAAAAACCTGATAATTGTATGTGCTTGATGATCTTGATCTCAAGAAGCTAATATGTCTTACGGATCCTGGCCTTTGCATCTCAATATGGCGATATTGTCCAACTTAATAAGCTCTCTGATAAGCGCCAACAATACTAGATTTGCAAAGTTAGAGGTCCTTCTAAGATCCTTGCACACTTTCACAATAAAGCTACTTAACGAATGATTCCAACCAAGAGCTAGTTAGAAGGAATTAACTACTTTGAAGGAATTAACTACTTTGAAGATGTAACGTAAAGGCTTCTTGAATCTTCTTTACCCTGCTTCTTGTAATTGCTCCTCCAGTACATGCAAAAGATCCGTTGTTAGATTCATATCACTCTCCGCACATGGTTTTACTTTTAATATTTTATACAAAAGACTTCGTACCTACAGAGACATTGCTCTTACTAGCTCTTACTAGCTCTTACTCATACCTGAACGTGAAACTATTGATATCTCAACGATCCTTCCATCAAATAAAAGATGATCAAATGAAGGATGAACGAGTATTAAATTTCTTGAAATCCTTTGTGTGTTACCCTGTGGTTAAATCTTGGTTTTGTTTCTGAGAACAGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTGGGAATGCTTCTGTCTGTGGTAGGTATTGTGGGTTTAATTGCTGTCATATGGCTACTCATTCGATACTTGTAAACACAACATAACCATATGGGTATAGATTTTTCACTTTATGATTAATATCATCATCCATAATTGTCCAGTAATGTTAGCTTGTTCTTATGCTTCATTTTTGTCCTGTGGTTTGGAAATTAAAT

mRNA sequence

ATGTGGGGTCTCACACTATTTTTTCTAAGTCCAAGTTTGTTCTTTCTTGTGGTTTGCAGGTCCGAAAAGGAGATAAATCGACGAAAGGACATGCTTGCTCAGATGAGATCAAAAGTAAACCAGATGGCCTCAACGCTGAACATGTCAAACTTCGCTAACCGCAACAGTTTGCTTGGCCCCGATATGAAATCAGCGGATGTAATGAGCAAAACAGCTGAACTAGACAACCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGTTGGAGGAGACTATAAGAAGTACAAAACATATTGCTTTGGCAGTTAATGAAGAACTCGATCTTCATACTCGCCTAATTGATGACTTAGACCAGCATGTCGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTGGGAATGCTTCTGTCTGTGGTAGGTATTGTGGGTTTAATTGCTGTCATATGGCTACTCATTCGATACTTGTAAACACAACATAACCATATGGGTATAGATTTTTCACTTTATGATTAATATCATCATCCATAATTGTCCAGTAATGTTAGCTTGTTCTTATGCTTCATTTTTGTCCTGTGGTTTGGAAATTAAAT

Coding sequence (CDS)

ATGTGGGGTCTCACACTATTTTTTCTAAGTCCAAGTTTGTTCTTTCTTGTGGTTTGCAGGTCCGAAAAGGAGATAAATCGACGAAAGGACATGCTTGCTCAGATGAGATCAAAAGTAAACCAGATGGCCTCAACGCTGAACATGTCAAACTTCGCTAACCGCAACAGTTTGCTTGGCCCCGATATGAAATCAGCGGATGTAATGAGCAAAACAGCTGAACTAGACAACCAAGGACTTGTTGGTTTTCAAAGACAAATCATGAAGGAGCAAGATGAAGGTCTTGAAAAGTTGGAGGAGACTATAAGAAGTACAAAACATATTGCTTTGGCAGTTAATGAAGAACTCGATCTTCATACTCGCCTAATTGATGACTTAGACCAGCATGTCGATGTTACAGACTCTCGATTAGCGAGGGTGCAGAAGAGATTGGGAATATTGAACAAGCGAGCAAAGGGGAGCTGCTCTTGCTTGGGAATGCTTCTGTCTGTGGTAGGTATTGTGGGTTTAATTGCTGTCATATGGCTACTCATTCGATACTTGTAA

Protein sequence

MWGLTLFFLSPSLFFLVVCRSEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLVGFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQKRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL
Homology
[Close]
BLAST of Carg22360 vs. NCBI nr
Match: XP_022932220.1 (syntaxin-52-like [Cucurbita moschata] >XP_022932221.1 syntaxin-52-like [Cucurbita moschata] >XP_022932222.1 syntaxin-52-like [Cucurbita moschata] >XP_022932223.1 syntaxin-52-like [Cucurbita moschata])

HSP 1 Score: 298.5 bits (763), Expect = 1.5e-77
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV
Sbjct: 73  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ
Sbjct: 133 GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL
Sbjct: 193 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 232

[Close]
BLAST of Carg22360 vs. NCBI nr
Match: XP_022965165.1 (syntaxin-52-like [Cucurbita maxima] >XP_022965166.1 syntaxin-52-like [Cucurbita maxima] >XP_022965167.1 syntaxin-52-like [Cucurbita maxima] >XP_022965168.1 syntaxin-52-like [Cucurbita maxima])

HSP 1 Score: 293.9 bits (751), Expect = 3.7e-76
Identity = 158/160 (98.75%), Postives = 158/160 (98.75%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDMLAQMRSKVNQMAS LNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV
Sbjct: 73  SEKEINRRKDMLAQMRSKVNQMASMLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ
Sbjct: 133 GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIW LIRYL
Sbjct: 193 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWRLIRYL 232

[Close]
BLAST of Carg22360 vs. NCBI nr
Match: XP_023553408.1 (syntaxin-52-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 285.4 bits (729), Expect = 1.3e-73
Identity = 156/160 (97.50%), Postives = 156/160 (97.50%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV
Sbjct: 73  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLA   
Sbjct: 133 GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLA--- 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
            RLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL
Sbjct: 193 -RLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 228

[Close]
BLAST of Carg22360 vs. NCBI nr
Match: XP_004149588.1 (PREDICTED: syntaxin-52-like [Cucumis sativus])

HSP 1 Score: 274.2 bits (700), Expect = 3.1e-70
Identity = 146/160 (91.25%), Postives = 153/160 (95.62%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDML QMRSKV QMASTLNMSNFANR+SLLGP+MKSADVMSKTAELDNQGLV
Sbjct: 74  SEKEINRRKDMLVQMRSKVKQMASTLNMSNFANRDSLLGPEMKSADVMSKTAELDNQGLV 133

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQR+IMKEQDEGLEKLEETI STKHIALAVNEEL LHTRLIDDLDQHVDVTDS+LARVQ
Sbjct: 134 GFQRKIMKEQDEGLEKLEETITSTKHIALAVNEELSLHTRLIDDLDQHVDVTDSQLARVQ 193

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           KRLGI+NKRAKGSCSC GMLLSVVGIV LI VIWLL++YL
Sbjct: 194 KRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLLVQYL 233

[Close]
BLAST of Carg22360 vs. NCBI nr
Match: XP_008449105.1 (PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449106.1 PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449108.1 PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449109.1 PREDICTED: syntaxin-51-like [Cucumis melo])

HSP 1 Score: 268.5 bits (685), Expect = 1.7e-68
Identity = 144/156 (92.31%), Postives = 148/156 (94.87%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDML QMRS+V QMASTLNMSNFANR+SLLGP+MKS DVMSKTAELDNQGLV
Sbjct: 73  SEKEINRRKDMLIQMRSEVKQMASTLNMSNFANRDSLLGPEMKSVDVMSKTAELDNQGLV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQRQIMKEQDEGLEKLEETI STKHIALAVNEELDLHTRLIDDLDQHVDV DSRLARVQ
Sbjct: 133 GFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELDLHTRLIDDLDQHVDVIDSRLARVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLL 177
           KRLGI+NKRAKGSCSC GMLLSVVGIV LI VIWLL
Sbjct: 193 KRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLL 228

[Close]
BLAST of Carg22360 vs. TAIR10
Match: AT1G16240.1 (syntaxin of plants 51)

HSP 1 Score: 223.8 bits (569), Expect = 8.6e-59
Identity = 112/160 (70.00%), Postives = 136/160 (85.00%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM+  +RSK NQMA+ LNMSNFANR+SLLGPD+K  D MS+   +DNQG+V
Sbjct: 73  SEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           G+QRQ+M+EQDEGLE+LE T+ STKHIALAV+EELDL TRLIDDLD HVDVTDSRL RVQ
Sbjct: 133 GYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ++NK  +  CSC+ MLLSV+GIVGL  VIW+L++Y+
Sbjct: 193 KSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKYM 232

[Close]
BLAST of Carg22360 vs. TAIR10
Match: AT1G79590.1 (syntaxin of plants 52)

HSP 1 Score: 216.5 bits (550), Expect = 1.4e-56
Identity = 111/160 (69.38%), Postives = 133/160 (83.12%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM+  +RSK NQ+AS LNMSNFANR+SL G D+K  D +++ + +DNQG+V
Sbjct: 74  SEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIV 133

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
            FQRQ+M+EQDEGLEKLEET+ STKHIALAVNEEL L TRLIDDLD  VD+TDSRL RVQ
Sbjct: 134 VFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQ 193

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ++NK  K  CSC+ MLLSV+GIVGL  VIWLL++YL
Sbjct: 194 KSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL 233

[Close]
BLAST of Carg22360 vs. TAIR10
Match: AT1G16230.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 117.5 bits (293), Expect = 8.7e-27
Identity = 63/114 (55.26%), Postives = 80/114 (70.18%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           S KE++RRK     +RSK NQMAS L+M  F+N + LL P+    D+MS+   LDNQG+V
Sbjct: 73  SGKEMSRRKGTFENLRSKANQMASALDMLKFSNIDILLRPE--KDDIMSRVIGLDNQGIV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDS 135
           G  RQ+MKE DE L+ LEET+   KH AL +NE++ L TRLID LD HVDV+DS
Sbjct: 133 GLHRQVMKEHDEALDMLEETVMRVKHNALVMNEQIGLQTRLIDGLDHHVDVSDS 184

[Close]
BLAST of Carg22360 vs. TAIR10
Match: AT1G16225.1 (Target SNARE coiled-coil domain protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.6e-25
Identity = 71/147 (48.30%), Postives = 94/147 (63.95%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           S KE++R KDM+  +RSK  QMAS L+M  F+N  SLLG D    D+MS+  ++DNQ +V
Sbjct: 49  SAKEMSRCKDMVEDLRSKAYQMASALDMLKFSNIGSLLGQD----DIMSRVIDMDNQEIV 108

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQR  MK QD+ LE LE+ +   K  ALA+N EL L TRLID LD HVDV+ S +  +Q
Sbjct: 109 GFQRTTMKVQDKALEMLEKGVMHLKREALAMNMELGLQTRLIDRLDHHVDVSASDVEELQ 168

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIV 168
                   R+  +  C+ +LLSVV +V
Sbjct: 169 --------RSIDTGVCMTLLLSVVVVV 183

[Close]
BLAST of Carg22360 vs. TAIR10
Match: AT1G28490.1 (syntaxin of plants 61)

HSP 1 Score: 52.0 bits (123), Expect = 4.5e-07
Identity = 41/155 (26.45%), Postives = 79/155 (50.97%), Query Frame = 0 

Query: 22  EKEINRRKDMLAQMRSKV---------NQMASTLNMSNFANRNSLLGPDMKSADVMSKTA 81
           E E+ +R+   +  R++V          +++S    ++   R  +  P+   A    +  
Sbjct: 78  EAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYG 137

Query: 82  ELDNQGLV----GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQH 141
             D+ G V      Q  ++K+QDE L++L ++++    + L +++EL    R+ID+LD  
Sbjct: 138 GRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTE 197

Query: 142 VDVTDSRLARVQKRLGILNKR--AKGSCSCLGMLL 162
           +D T +RL  VQK++G++ K+  AKG    +  LL
Sbjct: 198 MDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLL 232

[Close]
BLAST of Carg22360 vs. Swiss-Prot
Match: sp|Q9SA23|SYP51_ARATH (Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 1.6e-57
Identity = 112/160 (70.00%), Postives = 136/160 (85.00%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM+  +RSK NQMA+ LNMSNFANR+SLLGPD+K  D MS+   +DNQG+V
Sbjct: 73  SEKEMNRRKDMVGNLRSKANQMANALNMSNFANRDSLLGPDIKPDDSMSRVTGMDNQGIV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           G+QRQ+M+EQDEGLE+LE T+ STKHIALAV+EELDL TRLIDDLD HVDVTDSRL RVQ
Sbjct: 133 GYQRQVMREQDEGLEQLEGTVMSTKHIALAVSEELDLQTRLIDDLDYHVDVTDSRLRRVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ++NK  +  CSC+ MLLSV+GIVGL  VIW+L++Y+
Sbjct: 193 KSLAVMNKNMRSGCSCMSMLLSVLGIVGLAVVIWMLVKYM 232

[Close]
BLAST of Carg22360 vs. Swiss-Prot
Match: sp|Q94KK7|SYP52_ARATH (Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1)

HSP 1 Score: 216.5 bits (550), Expect = 2.5e-55
Identity = 111/160 (69.38%), Postives = 133/160 (83.12%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM+  +RSK NQ+AS LNMSNFANR+SL G D+K  D +++ + +DNQG+V
Sbjct: 74  SEKEMNRRKDMVGNLRSKTNQVASALNMSNFANRDSLFGTDLKPDDAINRVSGMDNQGIV 133

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
            FQRQ+M+EQDEGLEKLEET+ STKHIALAVNEEL L TRLIDDLD  VD+TDSRL RVQ
Sbjct: 134 VFQRQVMREQDEGLEKLEETVMSTKHIALAVNEELTLQTRLIDDLDYDVDITDSRLRRVQ 193

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ++NK  K  CSC+ MLLSV+GIVGL  VIWLL++YL
Sbjct: 194 KSLALMNKSMKSGCSCMSMLLSVLGIVGLALVIWLLVKYL 233

[Close]
BLAST of Carg22360 vs. Swiss-Prot
Match: sp|Q54IX6|STX8B_DICDI (Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 5.8e-12
Identity = 46/146 (31.51%), Postives = 77/146 (52.74%), Query Frame = 0 

Query: 22  EKEINRRKDMLAQMRSKVNQMASTLN--MSNFANRNSLLGPD-----------MKSADVM 81
           EKE+ RRK+ +  + S  NQ+ STL+  ++N + +N L+G +                  
Sbjct: 73  EKELLRRKNKVESLISMKNQLNSTLDAAINNTSQKNELMGNNNGVGIGYSNRQFGKPKET 132

Query: 82  SKTAELDNQGLVGFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQH 141
             T + DNQ L   Q+ IM+EQDE L+ L ++I   K++A A++ ELD H  ++DD++  
Sbjct: 133 EATKQFDNQQLFTNQQHIMREQDESLDLLSQSIMRQKNMAHAMSNELDQHNEMLDDVEIG 192

Query: 142 VDVTDSRLARVQKRLGILNKRAKGSC 155
            D    RL    +R+  + + A  +C
Sbjct: 193 TDAVSMRLRNANRRMETIKQNAGSTC 218

[Close]
BLAST of Carg22360 vs. Swiss-Prot
Match: sp|Q553P5|STX8A_DICDI (Syntaxin-8A OS=Dictyostelium discoideum OX=44689 GN=syn8A PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-06
Identity = 31/89 (34.83%), Postives = 50/89 (56.18%), Query Frame = 0 

Query: 74  LDNQGLVGFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTD 133
           L NQ +   Q++ M+EQD+ L+ L  +I   K  A+ +N+     T ++D+LD HVD T 
Sbjct: 50  LSNQDVFEKQKRDMEEQDKMLDALSGSISRVKDTAITINKTAQEQTDMLDELDVHVDSTS 109

Query: 134 SRLARVQKRLGILNKRAK--GSCSCLGML 161
           +R+    K L  L +++K  G CS +  L
Sbjct: 110 ARMRNTTKNLITLTQQSKTTGYCSAICFL 138

[Close]
BLAST of Carg22360 vs. Swiss-Prot
Match: sp|Q946Y7|SYP61_ARATH (Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 8.1e-06
Identity = 41/155 (26.45%), Postives = 79/155 (50.97%), Query Frame = 0 

Query: 22  EKEINRRKDMLAQMRSKV---------NQMASTLNMSNFANRNSLLGPDMKSADVMSKTA 81
           E E+ +R+   +  R++V          +++S    ++   R  +  P+   A    +  
Sbjct: 78  EAELEKRRRWTSNARTQVRNVKSGVLAGKVSSGAGHASEVRRELMRMPNSGEASRYDQYG 137

Query: 82  ELDNQGLV----GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQH 141
             D+ G V      Q  ++K+QDE L++L ++++    + L +++EL    R+ID+LD  
Sbjct: 138 GRDDDGFVQSESDRQMLLIKQQDEELDELSKSVQRIGGVGLTIHDELVAQERIIDELDTE 197

Query: 142 VDVTDSRLARVQKRLGILNKR--AKGSCSCLGMLL 162
           +D T +RL  VQK++G++ K+  AKG    +  LL
Sbjct: 198 MDSTKNRLEFVQKKVGMVMKKAGAKGQMMMICFLL 232

[Close]
BLAST of Carg22360 vs. TrEMBL
Match: tr|A0A1S3BLB5|A0A1S3BLB5_CUCME (syntaxin-51-like OS=Cucumis melo OX=3656 GN=LOC103491069 PE=4 SV=1)

HSP 1 Score: 268.5 bits (685), Expect = 1.1e-68
Identity = 144/156 (92.31%), Postives = 148/156 (94.87%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDML QMRS+V QMASTLNMSNFANR+SLLGP+MKS DVMSKTAELDNQGLV
Sbjct: 73  SEKEINRRKDMLIQMRSEVKQMASTLNMSNFANRDSLLGPEMKSVDVMSKTAELDNQGLV 132

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQRQIMKEQDEGLEKLEETI STKHIALAVNEELDLHTRLIDDLDQHVDV DSRLARVQ
Sbjct: 133 GFQRQIMKEQDEGLEKLEETIISTKHIALAVNEELDLHTRLIDDLDQHVDVIDSRLARVQ 192

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLL 177
           KRLGI+NKRAKGSCSC GMLLSVVGIV LI VIWLL
Sbjct: 193 KRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLL 228

[Close]
BLAST of Carg22360 vs. TrEMBL
Match: tr|A0A0A0L4X9|A0A0A0L4X9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064180 PE=4 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 3.6e-67
Identity = 143/160 (89.38%), Postives = 150/160 (93.75%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKEINRRKDML QMRSKV QMASTLNMSNFANR+SLLGP+MKSADVMSKTAELDNQGLV
Sbjct: 74  SEKEINRRKDMLVQMRSKVKQMASTLNMSNFANRDSLLGPEMKSADVMSKTAELDNQGLV 133

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           GFQR+IMKEQDEGLEKLEETI STKHIALAVNEEL LHTRLIDDLDQHVDVTDS+LA   
Sbjct: 134 GFQRKIMKEQDEGLEKLEETITSTKHIALAVNEELSLHTRLIDDLDQHVDVTDSQLA--- 193

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           KRLGI+NKRAKGSCSC GMLLSVVGIV LI VIWLL++YL
Sbjct: 194 KRLGIMNKRAKGSCSCFGMLLSVVGIVVLITVIWLLVQYL 230

[Close]
BLAST of Carg22360 vs. TrEMBL
Match: tr|I1KYD6|I1KYD6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100799465 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 1.2e-62
Identity = 132/169 (78.11%), Postives = 149/169 (88.17%), Query Frame = 0 

Query: 12  SLFFLVVCRSEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKT 71
           SL   V  ++EKE+NRRKDMLA +R+KVNQMASTLNMSNFANR+SLLGP++KS D MS+T
Sbjct: 61  SLLSKVPAKTEKEMNRRKDMLANLRTKVNQMASTLNMSNFANRDSLLGPEIKS-DAMSRT 120

Query: 72  AELDNQGLVGFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDV 131
             LDN GLVG QRQIMKEQD+GLEKLEET+ STKHIALAVNEEL+LHTRLIDDLDQHVDV
Sbjct: 121 VGLDNSGLVGLQRQIMKEQDDGLEKLEETVISTKHIALAVNEELNLHTRLIDDLDQHVDV 180

Query: 132 TDSRLARVQKRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           TDSRL RVQK L +LNKR KG CSCL MLLSV+GIVGL+ VIWLL++YL
Sbjct: 181 TDSRLRRVQKNLAVLNKRTKGGCSCLCMLLSVIGIVGLVVVIWLLVKYL 228

[Close]
BLAST of Carg22360 vs. TrEMBL
Match: tr|A0A2I4GYP9|A0A2I4GYP9_9ROSI (syntaxin-52-like isoform X3 OS=Juglans regia OX=51240 GN=LOC109012033 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.6e-62
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM A +RSKVNQMASTLNMSNFANR+SLLGP++K AD +S+T  LDN GLV
Sbjct: 74  SEKEMNRRKDMHASLRSKVNQMASTLNMSNFANRDSLLGPEVKPADALSRTVGLDNSGLV 133

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           G QRQ+MKEQDEGL KLEET+ STKHIALAVNEELDLHTRLIDDLDQHVDVTDSRL RVQ
Sbjct: 134 GLQRQVMKEQDEGLGKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQ 193

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ILNKR KG CSC+ MLLSV+GIV L+AVIWLLI+YL
Sbjct: 194 KHLAILNKRTKGGCSCMSMLLSVIGIVVLVAVIWLLIKYL 233

[Close]
BLAST of Carg22360 vs. TrEMBL
Match: tr|A0A2I4GYP4|A0A2I4GYP4_9ROSI (syntaxin-52-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109012033 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 1.6e-62
Identity = 130/160 (81.25%), Postives = 143/160 (89.38%), Query Frame = 0 

Query: 21  SEKEINRRKDMLAQMRSKVNQMASTLNMSNFANRNSLLGPDMKSADVMSKTAELDNQGLV 80
           SEKE+NRRKDM A +RSKVNQMASTLNMSNFANR+SLLGP++K AD +S+T  LDN GLV
Sbjct: 117 SEKEMNRRKDMHASLRSKVNQMASTLNMSNFANRDSLLGPEVKPADALSRTVGLDNSGLV 176

Query: 81  GFQRQIMKEQDEGLEKLEETIRSTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLARVQ 140
           G QRQ+MKEQDEGL KLEET+ STKHIALAVNEELDLHTRLIDDLDQHVDVTDSRL RVQ
Sbjct: 177 GLQRQVMKEQDEGLGKLEETVISTKHIALAVNEELDLHTRLIDDLDQHVDVTDSRLRRVQ 236

Query: 141 KRLGILNKRAKGSCSCLGMLLSVVGIVGLIAVIWLLIRYL 181
           K L ILNKR KG CSC+ MLLSV+GIV L+AVIWLLI+YL
Sbjct: 237 KHLAILNKRTKGGCSCMSMLLSVIGIVVLVAVIWLLIKYL 276

The following BLAST results are available for this feature:
BLAST of Carg22360 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022932220.11.5e-77100.00syntaxin-52-like [Cucurbita moschata] >XP_022932221.1 syntaxin-52-like [Cucurbit... [more]
XP_022965165.13.7e-7698.75syntaxin-52-like [Cucurbita maxima] >XP_022965166.1 syntaxin-52-like [Cucurbita ... [more]
XP_023553408.11.3e-7397.50syntaxin-52-like [Cucurbita pepo subsp. pepo][more]
XP_004149588.13.1e-7091.25PREDICTED: syntaxin-52-like [Cucumis sativus][more]
XP_008449105.11.7e-6892.31PREDICTED: syntaxin-51-like [Cucumis melo] >XP_008449106.1 PREDICTED: syntaxin-5... [more]
BLAST of Carg22360 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G16240.18.6e-5970.00syntaxin of plants 51[more]
AT1G79590.11.4e-5669.38syntaxin of plants 52[more]
AT1G16230.18.7e-2755.26Target SNARE coiled-coil domain protein[more]
AT1G16225.13.6e-2548.30Target SNARE coiled-coil domain protein[more]
AT1G28490.14.5e-0726.45syntaxin of plants 61[more]
BLAST of Carg22360 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SA23|SYP51_ARATH1.6e-5770.00Syntaxin-51 OS=Arabidopsis thaliana OX=3702 GN=SYP51 PE=1 SV=1[more]
sp|Q94KK7|SYP52_ARATH2.5e-5569.38Syntaxin-52 OS=Arabidopsis thaliana OX=3702 GN=SYP52 PE=1 SV=1[more]
sp|Q54IX6|STX8B_DICDI5.8e-1231.51Probable syntaxin-8B OS=Dictyostelium discoideum OX=44689 GN=syn8B PE=3 SV=1[more]
sp|Q553P5|STX8A_DICDI6.2e-0634.83Syntaxin-8A OS=Dictyostelium discoideum OX=44689 GN=syn8A PE=1 SV=1[more]
sp|Q946Y7|SYP61_ARATH8.1e-0626.45Syntaxin-61 OS=Arabidopsis thaliana OX=3702 GN=SYP61 PE=1 SV=1[more]
BLAST of Carg22360 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BLB5|A0A1S3BLB5_CUCME1.1e-6892.31syntaxin-51-like OS=Cucumis melo OX=3656 GN=LOC103491069 PE=4 SV=1[more]
tr|A0A0A0L4X9|A0A0A0L4X9_CUCSA3.6e-6789.38Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G064180 PE=4 SV=1[more]
tr|I1KYD6|I1KYD6_SOYBN1.2e-6278.11Uncharacterized protein OS=Glycine max OX=3847 GN=100799465 PE=4 SV=1[more]
tr|A0A2I4GYP9|A0A2I4GYP9_9ROSI1.6e-6281.25syntaxin-52-like isoform X3 OS=Juglans regia OX=51240 GN=LOC109012033 PE=4 SV=1[more]
tr|A0A2I4GYP4|A0A2I4GYP4_9ROSI1.6e-6281.25syntaxin-52-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109012033 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR000727T_SNARE_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22360-RACarg22360-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 94..114
NoneNo IPR availableGENE3DG3DSA:1.20.5.110coord: 85..148
e-value: 1.3E-17
score: 65.5
NoneNo IPR availablePANTHERPTHR19957SYNTAXINcoord: 21..178
NoneNo IPR availablePANTHERPTHR19957:SF149SYNTAXIN-51-RELATEDcoord: 21..178
NoneNo IPR availableCDDcd15841SNARE_Qccoord: 87..143
e-value: 5.5229E-18
score: 73.3616
NoneNo IPR availableSUPERFAMILYSSF58038SNARE fusion complexcoord: 75..146
IPR000727Target SNARE coiled-coil homology domainSMARTSM00397tSNARE_6coord: 79..146
e-value: 2.8E-7
score: 40.2
IPR000727Target SNARE coiled-coil homology domainPFAMPF05739SNAREcoord: 121..171
e-value: 1.0E-8
score: 35.0
IPR000727Target SNARE coiled-coil homology domainPROSITEPS50192T_SNAREcoord: 84..146
score: 13.61