Carg22277 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22277
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Brct domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_164 : 135103 .. 141908 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATTTATTTCTATTTTTTTTTCGCGGGAAGTTCTTGAGGATCCGATGGCGGAGCAAGACAATGTCCTCGCTAATGGAGTTATTTTCTGCCCTAATCGACCTGCCGGTGACTTTCTATCCTTCTCTGTATCTGTTTATACGCCCTTATTTTTCAGCAAATTGTTAGTGATGTTATTTCTAGGGTATGCGGGAGATTTTATCCGTTTGATTTTGATGATGATCTGTTTTAGTCAATTAGTTTTGTTGGATTTGAAATTTGAGAAATTCTGCTTTCATCAGTGTATTTTTTTGTTTATCCGTTTTAATTCTTGTGGATTGGGAAATGAAGCTTCGGTTAGAAGCTTTGCTTTCAGAAGTTACTGATTCTCTCCGTTTTACTCATAAGATTCCTTTCGATCCGGGATTTACTGTTTTGATTTTCGCGATGTTTGCAGGCTGCCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACTGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTACGTGGGTGTAATGTCAAGGTCTATTACTCATTTGGTGGGTTTTAATTTTATTATTCCTCAATTCAATCTGAAAAGCACCAATAGATTTCAAAGAAGACGAGTTTTGCTAATGTGTATGTGTGTAAAAGAAAGAGTACAGAGTTCTGGATGAGGATTGAATGAAATACGTTTGAGTATAATTTTGCAGTATTTATCTATTGTGAGTCACCCATCTGCAATCTTAGTCTAAAAAATGATGTTACTTATTGTTTATTCTTATGGTGATTAGATTTGTTGGGAATTAGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAAAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGATCCTTACATTCTTCAAAGGTACTATCAATGTTATGCAGAAGGTTACCTTCTCTACATTACATCATAGTTGCTTGCATACATCAAGCAATTACATACTGTCATAATTCTCTGTTGTGGGGGTCTTGTTCAAACACATTACTAGTACAAAAACTTAAGGGGTATATCAATTTTGTGAAGCGAGAAAAGATTTGTGTTTTCTAGCCATCAAGTCTATTAAGTGTAGAAAATGGACCATTAGGAACATTTAACAAATAACAAAGATTGAATGGAAAACTAAATGAAGCTGAAAATCTTATCTATTTTGTGCTGCAATTTAAATCGGTGCATATGTTCTGACTTTTTTATGCAAACCTTTGCAGTCAAATCAGGAAAGTTTCTTTTTCCCGAAAATAAATTATATCTTGCACTTCTTCATTTCTTGTATTCCTAATCCTGCCGAAACATATAATTTGCTTTTCACAGTAAAAGAGAACTAAATTTATAAACTGTATGGCCTTACTGTCTCTGATTATCTGTTCTTCCTAATGTTTTCCTTTGCATTTGCGCTATTAGTATGTTTTTTTTTTGTTGAGCTTTCCCTAAGGCTCGGTTACAAATCAGATAATATCCCACCATCGCTTTACGGCCTCTATCCTGTAATCTTGTTTATCTTTTTTTCTTCTTTTCCTTTTTATTGATTTGAATTGTGGATTTTATTCCTTGCAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTTCCTTTTTCTGACCAGGGTTCTGTCTCAACAAAAAAGTATACGATGCCTTCTGAAAAATTACATAATTGTGGAAATATTGAAGATCAAAGAATTAAAGGCATGTGCTCTTTTGGTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGTGATTCGAGTCGTTCCTCTCTTAAGATATGTGCACAAACTATCCTGAGTCTCTTACAGTTTTAAGTGGAGAGAAAGATATCGATGAGTTATTTTGTTGTAAGTTGTAACTCAAATGTCAAGATTAAACTCTTTAGGGAAAATATTAAAGAATCTGAATCCATTGATTGATTTACATTTCCTTTCATGGTTTTAGTGTAGTAAGTTCAGTTGAGATTTAGGGAATTCCTTATTTTCTTCACATTCATAACTTCATTGATCTTTTGAGGCCAAGTGCCATTCATAGATCTTTGTGCATGTTATGATATGTTAGATATTTAAATGTTAGGGCTCTCTTTATAGTCTTGTTTAGGTATTTTATTTTATTACTTAGGTTGTTAGTAAGTTACTGTGGTTAATTTTAAATAACCATCATTGTATTTAAATCTCATGGACTCATGACTTAAGCCTTTATATAAAGACTAAGGCTTCTCCTTTTGTACAACTCTTCTTGATCATTAATAAAGTAACAACCCTAAGGCATTTTGGATCCACCACCATTATCTTGAGAAAAAAAAAAGGTTGGAGTTCATTATTTGTCTAGAGTTAATACTCATCACTAACCCTTTTAATGTTAATCCCATCTAGGAGATGTACCCTGATTTTAGAAACAGTGATGACACCGCTCATAAACAAAAGCACAAATTGCGGAAGAGGATTTCTAAGCTAGAAGAACCATCAAGCTCAAGTAGCAAAAACCATTTTAAGGAACCAACTCCCTCTGATTTTTTTGCAATTGGGGTAAGATATATCTTTCTTCTTTCCATCTTACATTTTAATCCCGTTCATTTTTATCCACATTGCTACACTTGACTGAATAAAGTCCGCTTCTTTTGCACTTGAGGCCTAAATCTGTGGTAATATCTTGTACTAGCGCATGGTTTCAATCTAATAAATATATGTTCTAAATTTCTTATGTATTTAAGTAGTTTCCTTTAATTAACTAATGTGCTCTGGTTCTCATGTTCTAATTGTAGGTTGATGACATGGTATGTTTTGGTTCACCTTCCAATAATTTGAAGTTCTATTCTTATTTTTTTGAAGATGAAACAAGAGTTTTATTGATAAATGAAATGACCACCAATGGCGGATTACAAAAAATGATCTTCACTTGTAAATTAAAGAAGAAAGACTATAATCTTTGAAAGGGTGGGTACACTTACACCCATACTGACATCTCTATGCACTTTAGAATCCTTTTAACTACATGACTCTGGAGAACTAGTTGTAGAACCTTCAATAGAAAACAGGAGTTTGACATGATTTGTCTCAGATATAACAAAACAATGCACGATGGTTAAGAGGAGGCATTCGGCATGTGGGAAAGAAATTATGATGCCTGATAATAAAATGACTGTATACACGTGAGCGGTATAACATTCATAACGTTTTTACACAAATGTATATTAACATGATCGTACATTGAGTATTTCTCTACATTAGAATATAACATTTTATATTTGTTCGAATTAAATTATATATTAAAAAAGTCTGCTCTAGTAATGAATAACTGTGAGTAGTATTACCACGATCGTACACAAATGTATATTAACACGATCGTACATTGAGTACTTCTGCATTTTCATTTTGGTGTGGGTTGATGACTTGATATGATCTGACTAATCAATAATGGTCCATGAACTTCAATCTATTCGCCATAAACTTGTCAATTTATTTAACTGGTTGTGGCTAGGCTTTGACTTAGGAAGATTTTGCCTCAGGTAGGAACAATTGGTGGACGCTCATTAATCCCATCTTTTGAAATTCAGAAATACCGCCTGTTTTGCTTCTATGACTGGGGAATTTCAAACCCCAAAGCTTAATTGTAGACAGTACCTTTTGTAACGATTAGCCTCATTGGACCAGGAGATAATTTCAAATTGTCTGTTCAGAGGTGTAACTTTTACATTCTTCTGCGCTCACTTTTTCTTTTACTAGTATGTCACATTCTTTTGCACGTTGTCTCCTTTATTGGGTAATTGATTCCCTTTATTATTCTGATGAAATCCTATTCCCTTGTCTTTTTTGGTAAATCGTCACTTGAGAAAAGTAGCATTTTACTGTGAATCACAACTTCTTATGTACTTTTCAACTTTTGTTTTATTCATTGAGTTGTCTTTATTTCATTTGGATAGTGTGGCAGTTCTTCAAGTTTGGCGAGAGATGAAACAAAAGGTAAAAGATATAATGAAAACTCTACTGTTAGATCTTCTAGGAGATGGCGGCGACTTGTGAAGAAAAATTCTAGCGAAGATCATAATGAGCCTGACGTTTGGAATTTTGACCCGGAACAGTATCATTTGGTTATTCGTAATAGTCCTACAGTTTTGTCTAGCCATTGTGATGATGAAACAGATATTGAAGCGGTAAACATTGGAGGAACAGCTGATTGTGATCAGTTGTGCGACGAAAGGGGACTAGCGAGTGACAGTTTTGAAGGTGTTGAGGCTTGTGCGAACCAATCTACATCCAGACATACAAACTTACTAGTCGAAAATGCACCAAGAATCCTCACAACAACTTCAGAAGATGAATTGCACAATGGTTTACAAAAGAACATTGAGGATTCAGTTATAGAACTCAATACGAGCATACCCTCCACTTCGACGGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGCGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAAAACTGGGCAGATCACATGGTAAAAGTTTTATTTAATGTCTATACATGGAGATTCGCGGATCCAATTAAACTTTCTTGTTATATTCTTTTTTCTTTTTGAGCTAACGCTTATAAAAGCCAGGTCCTTGGACAGCGAACTGTACAATTTATTAAGCATATGAGAGTCAGAAAAAGACCCTAATCTATTGGTCTTGTGTCTTGTAGGCTTCGCGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACTTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGAACATCTCTATTGGATATTTACATTCTTCCCGATGAAAGAACTCTTGACAGCGTTGTTCAGGTCACATCTTCTTTATGCGCAGCATCCTTACTCTGTCGTTTTTTTGCTGGTTTGTGTGTGTTTGGAGGCACTTCTCATTGATATAATGAAAAAGAATAAAAGTTCAAGGGATACAAATTCCAAAGGGAGTGAAAAAAAATGCTAACAATAAATACAACCTTATAGAGATTAGCTAAGAAAATAAATAAACATTCAAAGAACCAAGAACTTCTCTAATATCTTTGATTGAAAGACTTGGAGAACTTGCAAAAGAATGATGAAACTATGAATATTGCTTCCACCGAATGCTGTGTACTCATAGCTACTTCAAAGCTTCCTAAGAAAACCAAGTACCGTTTACCAAATCTCAAAAGACCTTTTAAAACCAACCACAAGGCATTGTGATGCAATATATTCAAAAAGCTTCTCAATACCAAAAAGATTGATTCCATCAAACTCTAAACTTTAAGTCAAATCTGCACATGACTCCTCGGAAAACTCTTCAGCTTTGCAAGAACAACTATCCCACAAAAAGAAGCTTTGGAAGAACCATCATAGGTAAAGAAGTAAATTTCTCTTTATGCAAGTTAATCTAATTATCTAGACAAAACAAAATTTTGCAAAGCTAAACTGTGAAACGGTTTCCTTTCTTTAAGTCAGAGGAGAAATTTCACAAAACTCAAGACCACAGGCTTTTATCAATAGAGCGAATTTGGCCGATGGGGATGAAGAAATAAGAGGAGTCTTTTTGTCACAATCTCGAAAGAATAAGCCAAAATCTTCAGAAAAAGAATTTTCAAAAACATCAGTCTCTATAGTGAAGTCCTTTCGCGGAATGACTTATTCTATACACTACTCAAACCTACCTCAAAGTTAACCTTAGAGACTTCATCACGAGGTGCAAGGTTTTTTTTTTTTTTTCAAGTGTACAACTTCTCTTGTTAAATCTATATCTGGATCCAAAAGTGGGAAAACAAAATGGTTATTTGGGGTAAGATAGGTGAAGCGGAGGGTCGAAAGACGACATTACGATCAATGTACTTTTTCAGGTTTAGAAGTAGGCCAATGAAACACAAGCACTTCATTTTCAAGAACTCTATTCGTTGCAAGTGTTATTTTCTTGATCATATCTTCATAATACTTGCTATATCTCCATGGATGCATATTTATTTATTACCGTTAAAACGACCTATCTGGACCAACTGCTAAATCTCGATAGTTATAAATAACAGCCCTCTGTAGCAGCTGTTTGTAGTGTATGTCGATGTCGGGAACCAGAGGATCTCCTCATGAGCTGCCATCTTTGCCAGATTCGACATATTCATTCATACTGTCTGGACCCTCCCCTGTTACCATGGATTTGTATTCACTGTAAGGATCTACAAACACTCTACCATCGAAGACATTGATTTGTTGTCTTGAAATCAGGTAACTTGCCTCCATTTCCTATTCTGTCGTATTGTTTTGTGTGCTTTTCAAAATTCATCTGAGTTGGGGCATTGGTGGATTGAAGGGTAGCATACGGGTCATTGTGATCACAAACAAAACAGCTACCAACTTGTATGTGCTCAAGGGTACTGCTATCATTCTCCTTCTATTAGAAGCTAAGCACATGGGATGGGACTTATCGAATCATCTACCTAGCTGCAGATTACCTCATTAAGAAGTTAGCCTATGAAGTTCTTAGTTAGCTGAAGATTTTGAAGCAAAGAAAACCCAGCACTGATTATTGTTATTATTTTGAAAACTTTCATTTTGTTTGGCTGCTATGATCTAAAAATTGAACTGCATACACCATTCATGTAAATTAACTTGAGAATGAAAATTTTGTTGTCGATTTGGTCCTTAGAGTTTCGAAAGGGACACTTTGATCCATGAAGTTCGAAAATCGTATT

mRNA sequence

AATTTATTTCTATTTTTTTTTCGCGGGAAGTTCTTGAGGATCCGATGGCGGAGCAAGACAATGTCCTCGCTAATGGAGTTATTTTCTGCCCTAATCGACCTGCCGGCTGCCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACTGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTACGTGGGTGTAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTAGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAAAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGATCCTTACATTCTTCAAAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTTCCTTTTTCTGACCAGGGTTCTGTCTCAACAAAAAAGTATACGATGCCTTCTGAAAAATTACATAATTGTGGAAATATTGAAGATCAAAGAATTAAAGGCATGTGCTCTTTTGGTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGAGATGTACCCTGATTTTAGAAACAGTGATGACACCGCTCATAAACAAAAGCACAAATTGCGGAAGAGGATTTCTAAGCTAGAAGAACCATCAAGCTCAAGTAGCAAAAACCATTTTAAGGAACCAACTCCCTCTGATTTTTTTGCAATTGGGGTTGATGACATGTGTGGCAGTTCTTCAAGTTTGGCGAGAGATGAAACAAAAGGTAAAAGATATAATGAAAACTCTACTGTTAGATCTTCTAGGAGATGGCGGCGACTTGTGAAGAAAAATTCTAGCGAAGATCATAATGAGCCTGACGTTTGGAATTTTGACCCGGAACAGTATCATTTGGTTATTCGTAATAGTCCTACAGTTTTGTCTAGCCATTGTGATGATGAAACAGATATTGAAGCGGTAAACATTGGAGGAACAGCTGATTGTGATCAGTTGTGCGACGAAAGGGGACTAGCGAGTGACAGTTTTGAAGGTGTTGAGGCTTGTGCGAACCAATCTACATCCAGACATACAAACTTACTAGTCGAAAATGCACCAAGAATCCTCACAACAACTTCAGAAGATGAATTGCACAATGGTTTACAAAAGAACATTGAGGATTCAGTTATAGAACTCAATACGAGCATACCCTCCACTTCGACGGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGCGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAAAACTGGGCAGATCACATGGCTTCGCGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACTTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGAACATCTCTATTGGATATTTACATTCTTCCCGATGAAAGAACTCTTGACAGCGTTGTTCAGCCCTCTGTAGCAGCTGTTTGTAGTGTATGTCGATGTCGGGAACCAGAGGATCTCCTCATGAGCTGCCATCTTTGCCAGATTCGACATATTCATTCATACTGTCTGGACCCTCCCCTGTTACCATGGATTTGTATTCACTGTAAGGATCTACAAACACTCTACCATCGAAGACATTGATTTGTTGTCTTGAAATCAGGGTAGCATACGGGTCATTGTGATCACAAACAAAACAGCTACCAACTTGTATGTGCTCAAGGGTACTGCTATCATTCTCCTTCTATTAGAAGCTAAGCACATGGGATGGGACTTATCGAATCATCTACCTAGCTGCAGATTACCTCATTAAGAAGTTAGCCTATGAAGTTCTTAGTTAGCTGAAGATTTTGAAGCAAAGAAAACCCAGCACTGATTATTGTTATTATTTTGAAAACTTTCATTTTGTTTGGCTGCTATGATCTAAAAATTGAACTGCATACACCATTCATGTAAATTAACTTGAGAATGAAAATTTTGTTGTCGATTTGGTCCTTAGAGTTTCGAAAGGGACACTTTGATCCATGAAGTTCGAAAATCGTATT

Coding sequence (CDS)

ATGGCGGAGCAAGACAATGTCCTCGCTAATGGAGTTATTTTCTGCCCTAATCGACCTGCCGGCTGCCCAATTGAAGGTATGGAATCTGTGGTTGCGACTGTCAGTGGCTACCATGGCACTGAAAGATTCAACCTTATCAAGATGATATCTTATACTGGTGCCAGCTACGTGGGTGTAATGTCAAGGTCTATTACTCATTTGATTTGTTGGGAATTAGAAGGGAGGAAATTTAATCTTGCTAAGAAGTTTAAAACAATAATAGTCAATCATCGTTGGCTTGAAGATTGCATCAAACATGGAAAGCGTGTCCCTGAAGATCCTTACATTCTTCAAAGTGGCCAATCAGCAGGTCCCTTGTCAATGAAACTTCCTTTTTCTGACCAGGGTTCTGTCTCAACAAAAAAGTATACGATGCCTTCTGAAAAATTACATAATTGTGGAAATATTGAAGATCAAAGAATTAAAGGCATGTGCTCTTTTGGTGATTCAATCTTGCCCCATTCTTCTTTGCTGGATAAGGAGATGTACCCTGATTTTAGAAACAGTGATGACACCGCTCATAAACAAAAGCACAAATTGCGGAAGAGGATTTCTAAGCTAGAAGAACCATCAAGCTCAAGTAGCAAAAACCATTTTAAGGAACCAACTCCCTCTGATTTTTTTGCAATTGGGGTTGATGACATGTGTGGCAGTTCTTCAAGTTTGGCGAGAGATGAAACAAAAGGTAAAAGATATAATGAAAACTCTACTGTTAGATCTTCTAGGAGATGGCGGCGACTTGTGAAGAAAAATTCTAGCGAAGATCATAATGAGCCTGACGTTTGGAATTTTGACCCGGAACAGTATCATTTGGTTATTCGTAATAGTCCTACAGTTTTGTCTAGCCATTGTGATGATGAAACAGATATTGAAGCGGTAAACATTGGAGGAACAGCTGATTGTGATCAGTTGTGCGACGAAAGGGGACTAGCGAGTGACAGTTTTGAAGGTGTTGAGGCTTGTGCGAACCAATCTACATCCAGACATACAAACTTACTAGTCGAAAATGCACCAAGAATCCTCACAACAACTTCAGAAGATGAATTGCACAATGGTTTACAAAAGAACATTGAGGATTCAGTTATAGAACTCAATACGAGCATACCCTCCACTTCGACGGAGTTATCATGTGTCATCTGTTGGACAGATTTTAGTTCGACGAGGGGCGTTTTGCCCTGTGGGCACCGATTTTGCTATTCATGCATTCAAAACTGGGCAGATCACATGGCTTCGCGCAGAAAGATCTCAACTTGCCCTTTGTGCAAAGCCAGTTTTCTGAGCATCACAAAGGTTGAAGATGCTGCCACTTCGGATCAGAAGATATACTCCCAAACAATTCCATGTGGAACATCTCTATTGGATATTTACATTCTTCCCGATGAAAGAACTCTTGACAGCGTTGTTCAGCCCTCTGTAGCAGCTGTTTGTAGTGTATGTCGATGTCGGGAACCAGAGGATCTCCTCATGAGCTGCCATCTTTGCCAGATTCGACATATTCATTCATACTGTCTGGACCCTCCCCTGTTACCATGGATTTGTATTCACTGTAAGGATCTACAAACACTCTACCATCGAAGACATTGA

Protein sequence

MAEQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH

Homology

[Close]

BLAST of Carg22277 vs. NCBI nr
Match: XP_022935568.1 (uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 uncharacterized protein LOC111442404 [Cucurbita moschata])

HSP 1 Score: 1098.2 bits (2839), Expect = 0.0e+00
Identity = 534/540 (98.89%), Postives = 535/540 (99.07%), Query Frame = 0


Query: 1   MAEQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60
           MAEQDN LANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM
Sbjct: 1   MAEQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60

Query: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLS 120
           SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLS
Sbjct: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLS 120

Query: 121 MKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180
           MKLPFSDQGSVSTKKYT+PSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR
Sbjct: 121 MKLPFSDQGSVSTKKYTVPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180

Query: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDET 240
           NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG    CGSSSSLARDET
Sbjct: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG----CGSSSSLARDET 240

Query: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300
           KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE
Sbjct: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300

Query: 301 TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED 360
           TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED
Sbjct: 301 TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED 360

Query: 361 ELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420
           ELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 361 ELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420

Query: 421 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 480
           HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV
Sbjct: 421 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 480

Query: 481 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 540
           VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH
Sbjct: 481 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of Carg22277 vs. NCBI nr
Match: XP_023528978.1 (uncharacterized protein LOC111791740 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 1057.7 bits (2734), Expect = 1.3e-305
Identity = 518/540 (95.93%), Postives = 523/540 (96.85%), Query Frame = 0


Query: 1   MAEQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60
           MAEQDN LANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM
Sbjct: 1   MAEQDNGLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60

Query: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLS 120
           SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPE PYILQSGQSAGPLS
Sbjct: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSAGPLS 120

Query: 121 MKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180
           MKLPFSD+GSVSTKKY +PSEKLH+CGN+EDQRIKGMCSFGDSILPHSSLLDKEMYPDFR
Sbjct: 121 MKLPFSDKGSVSTKKYKVPSEKLHDCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180

Query: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDET 240
           NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG    CGSSSSLARDET
Sbjct: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG----CGSSSSLARDET 240

Query: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300
           KGKRYNENST RSSRRWRRLVKK+SSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE
Sbjct: 241 KGKRYNENSTDRSSRRWRRLVKKDSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300

Query: 301 TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED 360
           TDIEAVN GGTADCDQLCDERGLASDSFEGVEAC NQSTS    LLVENAPRILTTTSED
Sbjct: 301 TDIEAVNTGGTADCDQLCDERGLASDSFEGVEACENQSTS----LLVENAPRILTTTSED 360

Query: 361 ELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420
           ELHN LQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 361 ELHNDLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420

Query: 421 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 480
           HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYIL DERTLDSV
Sbjct: 421 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILRDERTLDSV 480

Query: 481 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 540
           VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH
Sbjct: 481 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 532

[Close]

BLAST of Carg22277 vs. NCBI nr
Match: XP_022983591.1 (E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1 E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima])

HSP 1 Score: 1044.3 bits (2699), Expect = 1.5e-301
Identity = 508/540 (94.07%), Postives = 516/540 (95.56%), Query Frame = 0


Query: 1   MAEQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60
           MAEQDN LAN VIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM
Sbjct: 1   MAEQDNGLANRVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVM 60

Query: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLS 120
           SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIK G RVPEDPYILQSGQSAGPLS
Sbjct: 61  SRSITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKQGMRVPEDPYILQSGQSAGPLS 120

Query: 121 MKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180
           MKLPFSD+GSVSTKKY +PSEKLHNCGN+EDQRIKGMCSFGDSILPHSSLLDKEMYPDFR
Sbjct: 121 MKLPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180

Query: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDET 240
           NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG    CGSSSSLARDET
Sbjct: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIG----CGSSSSLARDET 240

Query: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300
           KGKRYNENSTVRSSRRWRRLVKKNSSEDHN+PDVWNFDPEQYHL  RNS TVLSSHCDDE
Sbjct: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQYHLATRNSLTVLSSHCDDE 300

Query: 301 TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED 360
           TD E VN+GGTAD DQLCDERGLASDSFEGVEAC NQSTSRHTNLLVENAPRILT TSED
Sbjct: 301 TDTEVVNVGGTADRDQLCDERGLASDSFEGVEACENQSTSRHTNLLVENAPRILTVTSED 360

Query: 361 ELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420
           ELH  LQK IED VIELN SIPST+TELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 361 ELHKDLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 420

Query: 421 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 480
           HMAS RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SLLDIYILPDERTLDSV
Sbjct: 421 HMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLLDIYILPDERTLDSV 480

Query: 481 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 540
           VQPSVAAVCS+CRC+EPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH
Sbjct: 481 VQPSVAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 536

[Close]

BLAST of Carg22277 vs. NCBI nr
Match: XP_022983593.1 (E3 ubiquitin-protein ligase rnf8-A isoform X2 [Cucurbita maxima])

HSP 1 Score: 842.4 bits (2175), Expect = 8.4e-241
Identity = 411/439 (93.62%), Postives = 419/439 (95.44%), Query Frame = 0


Query: 102 RVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFG 161
           RVPEDPYILQSGQSAGPLSMKLPFSD+GSVSTKKY +PSEKLHNCGN+EDQRIKGMCSFG
Sbjct: 2   RVPEDPYILQSGQSAGPLSMKLPFSDKGSVSTKKYKVPSEKLHNCGNVEDQRIKGMCSFG 61

Query: 162 DSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFF 221
           DSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFF
Sbjct: 62  DSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFF 121

Query: 222 AIGVDDMCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQ 281
           AIG    CGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSSEDHN+PDVWNFDPEQ
Sbjct: 122 AIG----CGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSSEDHNDPDVWNFDPEQ 181

Query: 282 YHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSR 341
           YHL  RNS TVLSSHCDDETD E VN+GGTAD DQLCDERGLASDSFEGVEAC NQSTSR
Sbjct: 182 YHLATRNSLTVLSSHCDDETDTEVVNVGGTADRDQLCDERGLASDSFEGVEACENQSTSR 241

Query: 342 HTNLLVENAPRILTTTSEDELHNGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTR 401
           HTNLLVENAPRILT TSEDELH  LQK IED VIELN SIPST+TELSCVICWTDFSSTR
Sbjct: 242 HTNLLVENAPRILTVTSEDELHKDLQKIIEDPVIELNESIPSTTTELSCVICWTDFSSTR 301

Query: 402 GVLPCGHRFCYSCIQNWADHMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPC 461
           GVLPCGHRFCYSCIQNWADHMAS RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPC
Sbjct: 302 GVLPCGHRFCYSCIQNWADHMASSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPC 361

Query: 462 GTSLLDIYILPDERTLDSVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPL 521
           G SLLDIYILPDERTLDSVVQPSVAAVCS+CRC+EPEDLLMSCHLCQIRHIHSYCLDPPL
Sbjct: 362 GPSLLDIYILPDERTLDSVVQPSVAAVCSICRCQEPEDLLMSCHLCQIRHIHSYCLDPPL 421

Query: 522 LPWICIHCKDLQTLYHRRH 541
           LPWICIHCKDLQTLYHRRH
Sbjct: 422 LPWICIHCKDLQTLYHRRH 436

[Close]

BLAST of Carg22277 vs. NCBI nr
Match: XP_011651366.1 (PREDICTED: regulator of Ty1 transposition protein 107 [Cucumis sativus] >XP_011651367.1 PREDICTED: regulator of Ty1 transposition protein 107 [Cucumis sativus] >KGN57738.1 hypothetical protein Csa_3G271310 [Cucumis sativus])

HSP 1 Score: 836.6 bits (2160), Expect = 4.6e-239
Identity = 417/540 (77.22%), Postives = 453/540 (83.89%), Query Frame = 0


Query: 3   EQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
           E+D+ LAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66

Query: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIKHGKRVPE PYILQSGQS GPLSMK
Sbjct: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126

Query: 123 LPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182
           LP +D+G VS KKY + SEKLHN GN+EDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186

Query: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKG 242
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI     CGS SSLARDE KG
Sbjct: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAI----ECGSPSSLARDERKG 246

Query: 243 KRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETD 302
           +                        DHN+PD+ NFDPE Y L  RNS TV S   D ETD
Sbjct: 247 ESXXXXXXXXXXXXXXXXXXXXXXXDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETD 306

Query: 303 IEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDEL 362
           IE VNIGGT+D +QLCDERGLAS  FEGVEAC NQSTS+ TNLLV+NAPR+L+ TSEDEL
Sbjct: 307 IEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDEL 366

Query: 363 H--NGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 422
           H  N LQKNIED VIEL+ S+PSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 367 HNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 426

Query: 423 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 482
           HMA  RKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCG+SLLDIY+L DERTL++V
Sbjct: 427 HMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNV 486

Query: 483 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 541
           VQPSVAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 487 VQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542

[Close]

BLAST of Carg22277 vs. TAIR10
Match: AT1G67180.1 (zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing protein)

HSP 1 Score: 330.1 bits (845), Expect = 2.6e-90
Identity = 200/516 (38.76%), Postives = 274/516 (53.10%), Query Frame = 0


Query: 27  MESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEGRKFNLAKKFKTI 86
           ME+VVATVSGYHG++RF LIK+IS++GASYVG MSRSITHL+CW+ EG+K++LAKKF T+
Sbjct: 1   MENVVATVSGYHGSDRFKLIKLISHSGASYVGAMSRSITHLVCWKFEGKKYDLAKKFGTV 60

Query: 87  IVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPSEKLHNC 146
           +VNHRW+E+C+K G+RV E PY+  SG+  GPL ++LP   + +  TKK    SE     
Sbjct: 61  VVNHRWVEECVKEGRRVSETPYMFDSGEEVGPLMIELPAVSEEAKVTKKVNKASETFD-- 120

Query: 147 GNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKLEEPSSS 206
                   K   + G++    +S L   M       +      +H +R R  +   PSS 
Sbjct: 121 --------KYFSNGGENRSGSTSELATWM-------EKNVEANRHSVRLRTKR---PSSI 180

Query: 207 SSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKGKRYNENSTVRSSRRWRRLVKKNSS 266
                                    +S +A    KGK+      V   R +R L+   S 
Sbjct: 181 LENK--------------------ENSGVAESSRKGKK-----RVVKQRSYRNLIDLESX 240

Query: 267 EDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADCDQLCDERGLASD 326
                                  P        DE     V   G     +   +    + 
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXPA-------DENVRGFVFEQGETSALRHPGDLATPNW 300

Query: 327 SFEGVEACANQSTSRHTNLLVENAPRILTTTSEDELHNGLQKNIEDSVIELNTSIPSTST 386
             + +E   N S S      V   PR  +   + +       + ++S  E   +      
Sbjct: 301 DVDEIEESENWSHS-----AVFKRPRSFSPEIKPQ-------DDDESTREETEATEKAPA 360

Query: 387 ELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRRKISTCPLCKASFLSITKVED 446
           ++SC+ICWT+FSS+RG+LPCGHRFCYSCIQ WAD + S RK +TCPLCK++F++ITK+ED
Sbjct: 361 QVSCIICWTEFSSSRGILPCGHRFCYSCIQKWADRLVSERKKTTCPLCKSNFITITKIED 420

Query: 447 AATSDQKIYSQTIPCGTSLLDI-YILPDERTLDSVVQP-SVAAVCSVCRCREPEDLLMSC 506
           A +SDQKIYSQT+P  +S  +I  +LP+E      + P + A+ CS C   EPE+LL+ C
Sbjct: 421 ADSSDQKIYSQTVPDLSSTNNILVVLPEEEEQRQTLNPLTRASGCSRCYLTEPEELLIRC 452

Query: 507 HLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 541
           HLC  R IHSYCLDP LLPW C HC DLQ +YHRR+
Sbjct: 481 HLCNFRRIHSYCLDPYLLPWTCNHCNDLQMMYHRRN 452

[Close]

BLAST of Carg22277 vs. TAIR10
Match: AT4G02110.1 (transcription coactivators)

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-16
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 9   ANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASY-VGVMSRSITHL 68
           AN +++ P R     I G +++V  ++GY G +R ++++M+   G  +   +++  +THL
Sbjct: 92  ANSILYRPLRDLN-GIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHL 151

Query: 69  ICWELEGRKFNLAKKFKTI-IVNHRWLEDCIKHGKRVPEDPY 109
           IC++ EG K+ LAK+ K I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 152 ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of Carg22277 vs. TAIR10
Match: AT1G77320.1 (transcription coactivators)

HSP 1 Score: 53.9 bits (128), Expect = 3.5e-07
Identity = 30/102 (29.41%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 8   LANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYT-GASYVGVMSRSITH 67
           +++ +++ P  P   P+ G ES +   S  H  +   L++ +S   GA +V  ++R +TH
Sbjct: 646 VSSHILYSP-LPCQTPLPGFES-LCICSSQHNEKNVELLRNLSVVLGADFVERLTRKVTH 705

Query: 68  LICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPY 109
           LIC   +G K+  A K+  I V   WL +C++  + V  D +
Sbjct: 706 LICNFAKGDKYVRASKWGIISVTPDWLYECVRQNQVVCTDNF 745

[Close]

BLAST of Carg22277 vs. Swiss-Prot
Match: sp|O04251|Y4211_ARATH (BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g02110 PE=4 SV=3)

HSP 1 Score: 85.5 bits (210), Expect = 2.0e-15
Identity = 40/102 (39.22%), Postives = 67/102 (65.69%), Query Frame = 0


Query: 9   ANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASY-VGVMSRSITHL 68
           AN +++ P R     I G +++V  ++GY G +R ++++M+   G  +   +++  +THL
Sbjct: 92  ANSILYRPLRDLN-GIPGSKALVVCLTGYQGHDREDIMRMVELMGGQFSKPLVANRVTHL 151

Query: 69  ICWELEGRKFNLAKKFKTI-IVNHRWLEDCIKHGKRVPEDPY 109
           IC++ EG K+ LAK+ K I +VNHRWLEDC+K+ K +PE  Y
Sbjct: 152 ICYKFEGEKYELAKRIKRIKLVNHRWLEDCLKNWKLLPEVDY 192

[Close]

BLAST of Carg22277 vs. Swiss-Prot
Match: sp|Q800K6|TOB1A_XENLA (DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis OX=8355 GN=topbp1-A PE=1 SV=2)

HSP 1 Score: 50.4 bits (119), Expect = 7.0e-05
Identity = 27/95 (28.42%), Postives = 44/95 (46.32%), Query Frame = 0


Query: 27  MESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR---------SITHLICWELEGRKF 86
           +   V +VS + G ER +L+ +    GA       R         + THL+  + EG K+
Sbjct: 634 LRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFASTHLVLKDAEGSKY 693

Query: 87  NLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQS 113
             AKK+    V   WL  C + G++  ED Y++ +
Sbjct: 694 EAAKKWNLPAVTMNWLLQCARTGRKADEDSYLVDN 728

[Close]

BLAST of Carg22277 vs. Swiss-Prot
Match: sp|Q7ZZY3|TOB1B_XENLA (DNA topoisomerase 2-binding protein 1-B OS=Xenopus laevis OX=8355 GN=topbp1-B PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 2.7e-04
Identity = 29/97 (29.90%), Postives = 45/97 (46.39%), Query Frame = 0


Query: 27  MESVVATVSGYHGTERFNLIKMISYTGASY-----------VGVMSRSITHLICWELEGR 86
           +   V +VS + G ER +L+ +    GA              G+ +RS  HL   + EG 
Sbjct: 634 LRECVLSVSQFMGAERDSLVYLAGLLGAKVQEFFVRKANPKKGMFARS--HLDLKDAEGS 693

Query: 87  KFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQS 113
           K+  AKK+    V   WL  C + GK+  ED Y++ +
Sbjct: 694 KYEAAKKWNLPAVTMNWLLQCARTGKKADEDSYLVDN 728

[Close]

BLAST of Carg22277 vs. TrEMBL
Match: tr|A0A0A0L7F3|A0A0A0L7F3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1)

HSP 1 Score: 836.6 bits (2160), Expect = 3.1e-239
Identity = 417/540 (77.22%), Postives = 453/540 (83.89%), Query Frame = 0


Query: 3   EQDNVLANGVIFCPNRPAGCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSR 62
           E+D+ LAN ++ CPNR  GCPIEGMESVV TVSGYHGTERFNLIKMISYTGASYVG MSR
Sbjct: 7   EEDHGLANTILSCPNRIPGCPIEGMESVVVTVSGYHGTERFNLIKMISYTGASYVGAMSR 66

Query: 63  SITHLICWELEGRKFNLAKKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMK 122
           SITHLICWEL+GRKF+LA+KF+TIIVNHRWLEDCIKHGKRVPE PYILQSGQS GPLSMK
Sbjct: 67  SITHLICWELQGRKFDLAEKFRTIIVNHRWLEDCIKHGKRVPEGPYILQSGQSIGPLSMK 126

Query: 123 LPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFRNS 182
           LP +D+G VS KKY + SEKLHN GN+EDQ IK +CSFGDSILP SSLLDK++  DFR S
Sbjct: 127 LPLADKGYVSAKKYNLLSEKLHNYGNVEDQSIKDICSFGDSILPRSSLLDKDLSSDFRKS 186

Query: 183 DDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKG 242
           DDTAHK+KHK+RKRISKLE+PSSSSS+N F+EPT +  FAI     CGS SSLARDE KG
Sbjct: 187 DDTAHKRKHKVRKRISKLEDPSSSSSRNRFEEPTSAGLFAI----ECGSPSSLARDERKG 246

Query: 243 KRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDETD 302
           +                        DHN+PD+ NFDPE Y L  RNS TV S   D ETD
Sbjct: 247 ESXXXXXXXXXXXXXXXXXXXXXXXDHNKPDISNFDPELYRLGTRNSLTVPSVLWDAETD 306

Query: 303 IEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSEDEL 362
           IE VNIGGT+D +QLCDERGLAS  FEGVEAC NQSTS+ TNLLV+NAPR+L+ TSEDEL
Sbjct: 307 IEVVNIGGTSDREQLCDERGLASVRFEGVEACENQSTSKDTNLLVDNAPRVLSITSEDEL 366

Query: 363 H--NGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 422
           H  N LQKNIED VIEL+ S+PSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD
Sbjct: 367 HNMNDLQKNIEDPVIELDASLPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWAD 426

Query: 423 HMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSV 482
           HMA  RKISTCPLCKASFLSITKVE AATSDQKIYSQTIPCG+SLLDIY+L DERTL++V
Sbjct: 427 HMALSRKISTCPLCKASFLSITKVEYAATSDQKIYSQTIPCGSSLLDIYLLSDERTLNNV 486

Query: 483 VQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYHRRH 541
           VQPSVAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDLQTLYHR H
Sbjct: 487 VQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLQTLYHRSH 542

[Close]

BLAST of Carg22277 vs. TrEMBL
Match: tr|A0A1S3CF36|A0A1S3CF36_CUCME (uncharacterized protein LOC103500164 OS=Cucumis melo OX=3656 GN=LOC103500164 PE=4 SV=1)

HSP 1 Score: 498.0 bits (1281), Expect = 2.6e-137
Identity = 262/418 (62.68%), Postives = 283/418 (67.70%), Query Frame = 0


Query: 121 MKLPFSDQGSVSTKKYTMPSEKLHNCGNIEDQRIKGMCSFGDSILPHSSLLDKEMYPDFR 180
           MKLP +D+GSVS KKY + SEKLHN GN+EDQ I  +CS  DSILP  SLLDK       
Sbjct: 1   MKLPLADKGSVSAKKYNLLSEKLHNYGNVEDQSITDICSSSDSILPRCSLLDKR------ 60

Query: 181 NSDDTAHKQKHKLRKRISKLEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDET 240
                                                            GSSSS      
Sbjct: 61  -------------------------------------------------GSSSSXXXXXX 120

Query: 241 KGKRYNENSTVRSSRRWRRLVKKNSSEDHNEPDVWNFDPEQYHLVIRNSPTVLSSHCDDE 300
                                       HN+PD+WNFDPE+YHL   NS  V SSH   E
Sbjct: 121 XXXXXXXXXXXXXXXXXXXXXXXXXXXXHNKPDIWNFDPERYHLGTHNSLKVPSSHWAAE 180

Query: 301 TDIEAVNIGGTADCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED 360
           TD+E VNIGGT+DC++LCDERGLAS  FEG+EA  NQSTS  TNLLV+NAPR+L  T ED
Sbjct: 181 TDMEVVNIGGTSDCERLCDERGLASIRFEGIEAYENQSTSNDTNLLVDNAPRVLPITPED 240

Query: 361 ELH--NGLQKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 420
           ELH  N LQKNIED VIEL+ S+P TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW
Sbjct: 241 ELHNMNDLQKNIEDPVIELDASLPPTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNW 300

Query: 421 ADHMASRRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLD 480
           ADHMA  RKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCG SL+DIY+L DERTL+
Sbjct: 301 ADHMALSRKISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGPSLVDIYLLSDERTLN 360

Query: 481 SVVQPSVAAVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLY 537
           +VVQPSVAAVCS CRCREPEDLLMSCHLCQIR IHSYCLDPPLLPW CIHCKDL TLY
Sbjct: 361 NVVQPSVAAVCSACRCREPEDLLMSCHLCQIRQIHSYCLDPPLLPWTCIHCKDLLTLY 363

[Close]

BLAST of Carg22277 vs. TrEMBL
Match: tr|A0A2I4FR51|A0A2I4FR51_9ROSI (uncharacterized protein LOC109001339 OS=Juglans regia OX=51240 GN=LOC109001339 PE=4 SV=1)

HSP 1 Score: 481.9 bits (1239), Expect = 1.9e-132
Identity = 280/531 (52.73%), Postives = 341/531 (64.22%), Query Frame = 0


Query: 22  CPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEGRKFNLAK 81
           CPI+GMESVVATVSGYHG ERFNLIK+ISY GA+YVGV+S S THL+C + EG+K++ AK
Sbjct: 3   CPIQGMESVVATVSGYHGLERFNLIKLISYAGANYVGVLSGSTTHLVCLKFEGKKYDFAK 62

Query: 82  KFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPSE 141
           +   IIVNHRW+E+CIK GKRVPE PYIL SG+  GPL +++P    G VST    +P++
Sbjct: 63  RLNKIIVNHRWVEECIKQGKRVPEHPYILNSGEEVGPLLLEIPLVTVG-VSTNNCRVPAD 122

Query: 142 KLHNCGNIEDQRIKGMCSF-GDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISKL 201
           KL+ C N   Q +   C   G +    S LL K ++ D + S+DT+HK KHKL K+ S  
Sbjct: 123 KLNVCDNSGKQAVDLACEVSGLTTRTESCLLGKGLFSDPQKSNDTSHKSKHKLFKKAS-- 182

Query: 202 EEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKGKRYNENST---VRSSRRW 261
            E +  SS+   +EP  S  +    +    SS  L  D+ K + +N N        S + 
Sbjct: 183 AEQNRPSSRYCLEEPPLSGLYMQHEESSFCSSEHL--DKEKREIFNGNGRHIFSEPSCKG 242

Query: 262 RRLVKKNSSEDHNEPDVWNFDPEQYHLVIR-----NSPTVLSSHCDDETDIEAVNIGGTA 321
           RRLVKKN   D       N D  Q    IR     N+ + L        +     IG T 
Sbjct: 243 RRLVKKNICMDMESA---NVDSNQECNPIRVHDSYNNFSALPMCSGGTQNAHMQKIGITF 302

Query: 322 DCDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSE------DELHNGL 381
           D DQ  ++RGL +   EG EA      S+ +NL V++    L  TS+      D+L  G+
Sbjct: 303 D-DQFHNQRGLRN---EGREA------SKDSNLFVKHPSTALEGTSQYGCTNVDDLSEGI 362

Query: 382 QKNIEDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRR 441
           +   ++S IE  T +P TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRR
Sbjct: 363 K---DESQIEHVTRLP-TSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRR 422

Query: 442 KISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVA 501
           KISTCPLCKA F  ITKVEDAAT+DQKIYSQTIPC  S LDI+IL D+ T     Q S A
Sbjct: 423 KISTCPLCKAIFTRITKVEDAATTDQKIYSQTIPCAPSDLDIFILTDQETRSFGAQSSFA 482

Query: 502 AVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLYH 538
             CS CRCREPEDLL+SCHLCQ R IHSYCLDPPLLPW C+HC DL+ +YH
Sbjct: 483 PTCSACRCREPEDLLISCHLCQTRRIHSYCLDPPLLPWTCMHCNDLRMIYH 511

[Close]

BLAST of Carg22277 vs. TrEMBL
Match: tr|A0A2P4MN73|A0A2P4MN73_QUESU (Brct domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_26423 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 4.0e-130
Identity = 276/518 (53.28%), Postives = 345/518 (66.60%), Query Frame = 0


Query: 23  PIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEGRKFNLAKK 82
           PI+GMESVVATVSGYHG+ERFNLIK+IS  GASYVG MSRSITHL+CW+ EG+K++LAKK
Sbjct: 4   PIQGMESVVATVSGYHGSERFNLIKLISNAGASYVGTMSRSITHLVCWKFEGKKYDLAKK 63

Query: 83  FKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPSEK 142
           FK +IVNHRW+E+C++ GKRVPE+PYI +SG+  GPL M+LP  +  SVS K   + ++K
Sbjct: 64  FKIMIVNHRWVEECMRQGKRVPENPYIFRSGEEVGPLLMELPLVNT-SVSAKNRKVLTDK 123

Query: 143 LHNCGNIEDQRIKGMCSFGDSIL---PHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISK 202
            + C   + Q I   C  GDS L     S LL+K ++PD R  +D ++K KHKL ++ SK
Sbjct: 124 SNTCEISQTQSIDLAC--GDSGLAAFSESYLLNKNLFPDSRERNDISNKLKHKLVRKTSK 183

Query: 203 LEEPSSSSSKNHFKEPTPSDFFAIGVDDMCGSSSSLARDETKGKRYNENS---TVRSSRR 262
             + + SSS++  +EP  S  F    +    SS S   D  K K  N N    +   S +
Sbjct: 184 --QVNGSSSRSCLEEPPLSGLFTKKHE---SSSYSKHLDRDKRKILNNNGLNISAEPSYK 243

Query: 263 WRRLVKKNSSEDHNEPDVWNFDPEQYHLVI---RNSPTVLSSHCDDETDIEAVNIGGTAD 322
            RRLV++N+S    E    + D E Y + +    NS    SSH D   +   + IGG + 
Sbjct: 244 GRRLVERNASIPLLESAQLDLDKECYPIRVLNPHNSVAGSSSHSDAIQNTNILEIGGAS- 303

Query: 323 CDQLCDERGLASDSFEGVEACANQSTSRHTNLLVENAPRILTTTSED---ELHNGLQKNI 382
               C    L+  + EG EA      S  ++L V++AP  +  TS+D    + +  ++ I
Sbjct: 304 -GDRC--HILSRITNEGSEA------SMDSDLCVKHAPTAMERTSQDGCTNVEDLQEETI 363

Query: 383 EDSVIELNTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRRKIST 442
           ++S  E  T +P TSTELSCVICWTDFSSTRGVLPCGHRFCYSCI +WAD MASRRKIST
Sbjct: 364 DESQNEHVTRLP-TSTELSCVICWTDFSSTRGVLPCGHRFCYSCILSWADVMASRRKIST 423

Query: 443 CPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVAAVCS 502
           CPLCK SF SITKVEDAAT+DQKIYSQTIPC  S LDI+IL D  T     Q S+A +CS
Sbjct: 424 CPLCKVSFNSITKVEDAATTDQKIYSQTIPCAHSDLDIFILADLETTSFGAQSSLALICS 483

Query: 503 VCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIH 529
            CRCREPEDLL+SCHLCQIR IHSYCLDPPLLPW CIH
Sbjct: 484 KCRCREPEDLLISCHLCQIRRIHSYCLDPPLLPWTCIH 502

[Close]

BLAST of Carg22277 vs. TrEMBL
Match: tr|A0A2P5BAP6|A0A2P5BAP6_9ROSA (Cdk-activating kinase assembly factor OS=Trema orientalis OX=63057 GN=TorRG33x02_327790 PE=4 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 4.1e-127
Identity = 268/530 (50.57%), Postives = 341/530 (64.34%), Query Frame = 0


Query: 21  GCPIEGMESVVATVSGYHGTERFNLIKMISYTGASYVGVMSRSITHLICWELEGRKFNLA 80
           G P+ GMESVVATVSGYHG ERFNLIK+I++ GASYVG MSRSITHL+CW+LEGRKF++A
Sbjct: 5   GSPVGGMESVVATVSGYHGNERFNLIKLINHAGASYVGSMSRSITHLVCWKLEGRKFDIA 64

Query: 81  KKFKTIIVNHRWLEDCIKHGKRVPEDPYILQSGQSAGPLSMKLPFSDQGSVSTKKYTMPS 140
            +  TI+VNHRW+EDCIK GKRVPE+PY+LQSGQ  G L ++ P   +  V      + S
Sbjct: 65  MRLNTIVVNHRWVEDCIKQGKRVPEEPYMLQSGQEVGALMLEYPHVPEVDVQ----KVLS 124

Query: 141 EKLHNCGNIEDQRIK-GMCSFGDSILPHSSLLDKEMYPDFRNSDDTAHKQKHKLRKRISK 200
           +K + C   + Q +  G+    D++L HSS L + ++ DF N   ++ K K KL K  S 
Sbjct: 125 DKSNTCYGSQKQSVSMGLQPSEDTVLHHSSSLTERVFSDFYNLGKSSRKSKRKLVK--SN 184

Query: 201 LEEPSSSSSKNHFKEPTPSDFFA-IGVDDMCGSSSSLARDETKGKRYNENSTVRSSRRWR 260
            E+   SSS+  F+E   S+      V+    SS +LARD+ K    N +S   +SR+ R
Sbjct: 185 SEQELHSSSRCSFQESPLSELLRNQQVESSFHSSMNLARDKRKSFNGNRSSKPETSRKGR 244

Query: 261 RLVKKNSSEDHNE--PDVWNFD--PEQYHLVIRNSPTVLSSHCDDETDIEAVNIGGTADC 320
           RL+K+  + D  E      N D  P +       + TVLS+H D E   E +     A  
Sbjct: 245 RLIKRIENRDIVELCSSDSNQDCCPARVDNPNNEAVTVLSNHVDGEPYDEVLE-NDRASG 304

Query: 321 DQLCDERGLASDSFEGVEA----CANQSTSRHTNLLVENAPRILTTTSEDELHNGLQKNI 380
           D L + +   ++  + V      C   S S   N+  ENA   +  TSED   +G +   
Sbjct: 305 DGLYNRKETRNEGSKDVGGDAPNCIAASASMDPNVCTENAVSNMQRTSEDGC-SGAKNPK 364

Query: 381 EDSVIEL----NTSIPSTSTELSCVICWTDFSSTRGVLPCGHRFCYSCIQNWADHMASRR 440
           ED+  EL    ++ IPS S ELSCVICWTDFSSTRGVLPCGHRFCYSCI+NWADHMASRR
Sbjct: 365 EDTTKELEIKHSSEIPS-SRELSCVICWTDFSSTRGVLPCGHRFCYSCIENWADHMASRR 424

Query: 441 KISTCPLCKASFLSITKVEDAATSDQKIYSQTIPCGTSLLDIYILPDERTLDSVVQPSVA 500
           KISTCPLCK SF +I K +DAATS+QKIYSQT+PCG S +D++IL D+ TL++  Q   A
Sbjct: 425 KISTCPLCKTSFSNILKFKDAATSEQKIYSQTVPCGLSTMDMFILHDQDTLNASAQSESA 484

Query: 501 AVCSVCRCREPEDLLMSCHLCQIRHIHSYCLDPPLLPWICIHCKDLQTLY 537
           AVCSVC   EP DLL+ C++CQIR IHSYCLDPP+ PW CI CKDLQ LY
Sbjct: 485 AVCSVCHRLEPVDLLIICNVCQIRRIHSYCLDPPVDPWTCIDCKDLQRLY 525

The following BLAST results are available for this feature:

BLAST of Carg22277 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022935568.1	0.0e+00	98.89	uncharacterized protein LOC111442404 [Cucurbita moschata] >XP_022935569.1 unchar...	[more]
XP_023528978.1	1.3e-305	95.93	uncharacterized protein LOC111791740 [Cucurbita pepo subsp. pepo]	[more]
XP_022983591.1	1.5e-301	94.07	E3 ubiquitin-protein ligase rnf8-A isoform X1 [Cucurbita maxima] >XP_022983592.1...	[more]
XP_022983593.1	8.4e-241	93.62	E3 ubiquitin-protein ligase rnf8-A isoform X2 [Cucurbita maxima]	[more]
XP_011651366.1	4.6e-239	77.22	PREDICTED: regulator of Ty1 transposition protein 107 [Cucumis sativus] >XP_0116...	[more]

BLAST of Carg22277 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G67180.1	2.6e-90	38.76	zinc finger (C3HC4-type RING finger) family protein / BRCT domain-containing pro...	[more]
AT4G02110.1	1.1e-16	39.22	transcription coactivators	[more]
AT1G77320.1	3.5e-07	29.41	transcription coactivators	[more]

BLAST of Carg22277 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O04251\|Y4211_ARATH	2.0e-15	39.22	BRCT domain-containing protein At4g02110 OS=Arabidopsis thaliana OX=3702 GN=At4g...	[more]
sp\|Q800K6\|TOB1A_XENLA	7.0e-05	28.42	DNA topoisomerase 2-binding protein 1-A OS=Xenopus laevis OX=8355 GN=topbp1-A PE...	[more]
sp\|Q7ZZY3\|TOB1B_XENLA	2.7e-04	29.90	DNA topoisomerase 2-binding protein 1-B OS=Xenopus laevis OX=8355 GN=topbp1-B PE...	[more]

BLAST of Carg22277 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L7F3\|A0A0A0L7F3_CUCSA	3.1e-239	77.22	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G271310 PE=4 SV=1	[more]
tr\|A0A1S3CF36\|A0A1S3CF36_CUCME	2.6e-137	62.68	uncharacterized protein LOC103500164 OS=Cucumis melo OX=3656 GN=LOC103500164 PE=...	[more]
tr\|A0A2I4FR51\|A0A2I4FR51_9ROSI	1.9e-132	52.73	uncharacterized protein LOC109001339 OS=Juglans regia OX=51240 GN=LOC109001339 P...	[more]
tr\|A0A2P4MN73\|A0A2P4MN73_QUESU	4.0e-130	53.28	Brct domain-containing protein OS=Quercus suber OX=58331 GN=CFP56_26423 PE=4 SV=...	[more]
tr\|A0A2P5BAP6\|A0A2P5BAP6_9ROSA	4.1e-127	50.57	Cdk-activating kinase assembly factor OS=Trema orientalis OX=63057 GN=TorRG33x02...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011011	Znf_FYVE_PHD
IPR017907	Znf_RING_CS
IPR036420	BRCT_dom_sf
IPR013083	Znf_RING/FYVE/PHD
IPR001357	BRCT_dom
IPR001841	Znf_RING

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22277-RA	Carg22277-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 390..434 e-value: 1.0E-7 score: 41.6
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 389..435 e-value: 4.8E-10 score: 39.5
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 390..435 score: 13.315
IPR001357	BRCT domain	SMART	SM00292	BRCT_7	coord: 24..100 e-value: 7.9E-12 score: 55.3
IPR001357	BRCT domain	PFAM	PF12738	PTCB-BRCT	coord: 30..92 e-value: 5.1E-19 score: 67.9
IPR001357	BRCT domain	PROSITE	PS50172	BRCT	coord: 19..110 score: 17.012
IPR001357	BRCT domain	CDD	cd00027	BRCT	coord: 39..98 e-value: 3.4018E-10 score: 55.7907
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 350..460 e-value: 1.8E-15 score: 58.4
IPR036420	BRCT domain superfamily	GENE3D	G3DSA:3.40.50.10190		coord: 24..115 e-value: 1.5E-23 score: 85.0
IPR036420	BRCT domain superfamily	SUPERFAMILY	SSF52113	BRCT domain	coord: 25..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 180..217
None	No IPR available	PANTHER	PTHR13561	DNA REPLICATION REGULATOR DPB11-RELATED	coord: 247..517
None	No IPR available	PANTHER	PTHR13561:SF43	CHITIN BIOSYNTHESIS PROTEIN CHS5	coord: 247..517 coord: 35..125
None	No IPR available	PANTHER	PTHR13561	DNA REPLICATION REGULATOR DPB11-RELATED	coord: 35..125
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 385..443
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 406..415
IPR011011	Zinc finger, FYVE/PHD-type	SUPERFAMILY	SSF57903	FYVE/PHD zinc finger	coord: 487..532

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22277	Cla007104	Watermelon (97103) v1	carwmB0475
Carg22277	Csa3G271310	Cucumber (Chinese Long) v2	carcuB0513
Carg22277	MELO3C023782	Melon (DHL92) v3.5.1	carmeB0485
Carg22277	ClCG05G011930	Watermelon (Charleston Gray)	carwcgB0464
Carg22277	CSPI03G20540	Wild cucumber (PI 183967)	carcpiB0520
Carg22277	Cucsa.031510	Cucumber (Gy14) v1	carcgyB0552
Carg22277	CmaCh14G008050	Cucurbita maxima (Rimu)	carcmaB0668
Carg22277	CmoCh14G008200	Cucurbita moschata (Rifu)	carcmoB0650
Carg22277	Lsi05G003900	Bottle gourd (USVL1VR-Ls)	carlsiB435
Carg22277	Cp4.1LG03g06140	Cucurbita pepo (Zucchini)	carcpeB0673
Carg22277	CsGy3G020240	Cucumber (Gy14) v2	carcgybB0489
Carg22277	MELO3C023782.2	Melon (DHL92) v3.6.1	carmedB0490
Carg22277	CsaV3_3G020510	Cucumber (Chinese Long) v3	carcucB0518
Carg22277	Cla97C05G093860	Watermelon (97103) v2	carwmbB0503
Carg22277	Bhi01G001453	Wax gourd	carwgoB0584

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22277	Silver-seed gourd	carcarB471
Carg22277	Cucurbita maxima (Rimu)	carcmaB0669
Carg22277	Cucurbita moschata (Rifu)	carcmoB0651
Carg22277	Cucurbita pepo (Zucchini)	carcpeB0672
Carg22277	Melon (DHL92) v3.6.1	carmedB0489