Carg22240 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22240
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	GABA transporter like
Location	Cucurbita_argyrosperma_scaffold_174 : 257303 .. 261401 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATATCAGTTTCGCCTCCCTCTCCGTACCGGCCTTGGATTCCACCACCGCCCGCCGACAGCGACAACTACGATGGGGATTCAGCTTCCGGTCACCGAAGACCGAATCTCCGACGCCGGAGCATCATTCGTCCTCCAATCCAAAGGTAACGCAAACAAGAAGAAGAAGTAGAATAATATTAAGAAGAGAGGTTTTGCGATGTTTTGCGATCGTCTCTGTTTACAAAATTTCGATTCTCTGGAACAATCGAGAACAACAACGGAGTTTTATTTTGAGTCGTTGATTTTTGTTTCCTTGGATTGACGAATGAAAACAGGGGAATGGTGGCATGCGGGATTCCATTTGACGACGGCGATTGTCGGACCGACGATTCTAACGCTGCCGTACGCGTTCAGAGGATTAGGTTGGGGATTAGGGTTTTTCTGCTTGACGATTATGGCCGTTGTGACTTTCTACTCGTATTTCCTCATGTCGAAGGTTCTCGATCACTGCGAGAAGGCCGGTCGCCGTCACATCCGATTCCGGGAACTCGCCGCCGACGTATTAGGTATCGATTCTAAGAATATCGCTTTCAATTTTCCGCCTCGAAATTCTCTGTTCTAAAAAACGTATAATACTTCAAAACTCGTAATAATTTGTTTTTATATAATTCTCATTTTATAATATTTTAATTAAAAGACTTTTAAATATATGTCATACTTTTATTTATTTACATTAAAAAATTTCTAATATAGCCAAATGGATCAACCATTGAGATCTTCTGCTTTTAATCCACGCGGAGATGCATAGACCATAAGTTAAGCCTTTTAAGCCTTGAGAGACGTATGAGTATCACAAATTTGTCAGTTTCTTATAGCGCCGCGCCCCCACAGACCAAAATTGTTCCACCATACCTACTATTTATTCATCTCTGTCTCCCTATAAATGGGTCGTATTTTGGATCTTGATTTTGAACTTTGAACAGGATCTGGATGGATGTTTTACTTCGTAATATTCATCCAAACCGCGATCAATACTGGAGTTGGAATTGGAGCAATCTTGCTCTCCGGGCAGTGCCTTCAGGTGTCTCCTAACTTTATTCTTTTTGCAGCTCTTTCTGTTGTTTAATTCCCGTTTTTATGCTGTGTGGTTGATGTATAGATACACTCTTAAGTACTTACTGCTGCTGATATTAGTGTGAAATGTTGACCCAATAAAAGCATGTGAAAGTTTTGTTCATCTTCTTTTTCTCTTCACTTTTGTGTCGTAGTTGTCTATTTATTAGGTGGGTGGTGGCTTTCTTTTTCTTGTCGGCCTTCAAATTCGTTCAGACTTGTCAAAAGTTTTTCACACTTGTTAATTGTTACGTTTTGAACATTCTCTTTGACTTATATACTTGTAATCGCCCAAATCTATCGTTAGCACCAGATATTGTCTTCTTTAGCTTTGGTTTTTCCTTTCTAGCTTTCTTCAAGGTTTTTAAAACACTTCTGGTAGGAAAAGGTTTTCACACCTATAAAGGGTGTTTCGTTCTCCTCTCCAACCAATGTGGGATCTCACAATCCGCACCCAAAAGGGTGTGTTTCGTTCTTCCCCATCGATGTGGGATCTCACAATCCACCTCCTTCAGGGTCTAGCATTCTCATTCCTTTCTCCAATCGATTTGGGACCACCACCAAATCCATCCCCCTTTGGGGCCAACGTCCTTACTAGCACATCGCCTCGTGTCTACCACCCCCTTTGAGGAACAGCCTTGTGATGTCCCACATTGGCTGGGGAGGAGAACAAATCACCCTTTATAAGGCTGTGGAAACCTTCCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGAAGCCCAAAGAGGACAATATCTGCTAGCGGTGGATCTGGGTCGTTACAAGCCTCCTCGCTGGCACATCGTCCAGGCTTTAATACCATTTGTAATGGCTCAAGTCCACCGCTAGCAGATATTGTCCTCTTTTGGCTTTTCCTTTCGGGCTTTTCCTCAAAAAACACGTCTGCTAGGGAAAGGTTTCGACACCCTTATAAAGAGTGTTTCGTTCTCCTCCCCAACCGATGTGGGATCTCACCATACAGGTCAAATTGAAATAATTGTGAGAGTTTAGGAGCTCATTTGAACATTTAAGACTGGATTTAATATGAACTTGAATGTGTGGACAACATGTTTGTAGGATCACTTTTCTTTTCTTGTTTTCTGCTGAAATGTGAAAGAAGAAAGGAAAGATTGATATGGTTCTTGTTTACCGTTGGGGATGACATACAGATAATATATTCAAACCTTTACCCAAATGGATCCATGAAACTGTACGAGTTCATAGCAATAGTAACAGGAGTGATGATCATTCTGTCTCAGCTTCCAACCTTCCACTCTCTTAGACATGTCAGTCTGGCTTCTCTGCTTCTCAGCTTGGGCTACGCCTTTCTTATTATTGCTGCTTGTATCATTGCAGGTACTATTTATTACCATTGCTTTAATACCCCACGAGTTTTGAAATTTGATGTCCATGGTTGTTTTTTTCCTCTTCTTTTGTGTTATTGAAGCAATGAGCAAAGAAGCTCCAGAAAGGGAGTATAGCTTAGAATCATCACCAAAATCAAGGGTCTTCAGCGCCTTCACTTCCATCTCCATTTTAGCAGCCATTTTTGGGAACGGAATCCTTCCTGAAATCCAAGTAAAATACTAATCAACGCAACTTCGTCTAAATAAGATTAGTTAACAATGATCATAATATTCTATATAGTTATAATGATATCACGTATATCTTCAAATTTGTACACATAAGTTATGAAGACATTAGAAATGTTGCACGTTAGAAATCACAACTCTTCGCATTGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAGAGGCCTCATACCAGTAGAGATAGTATTCCTCACTTATAAACCCAGGATCTTTCTCACTCCAAGTAATCATCAACAGTCCACCCCTCGAACAAAGTACACCATTTGTTCGACACTTTAGTCACTTTTGACTACACCTTCGAGGCTCACAATTCTCTGTTCCTCAACAGTCCACCCCTCGAACAAAGTACACCCTTTGTTCGACACTTGAGTTACTTTTGACTACACCTTCGAGGCTCACAATTCTCTGTTCGATATTTGAGAATTCCATTGACATGGTTAAGTTTAGGGCATGACTCTGATACCATGTTAGAAATTACGACTCTCCACAATGGTATGATATTGTCCATTTTGAGCATAAGTTCTCGTAGCTTTGCTTTGGGTTTCCCCAAAAGGTCTCATATCAATAGAGATAGTATTCCTCACTTATAAACCCATGATCGACTCACTCCCAATAATCATCATCAACACTGCAATGAGCATGTTCAAATCCCTATATTTGTGAACAGGCAACTCTAGCAGCTCCAGCGAGTGGGAAGATGGTGAAAGGGCTTTTGATGTGTTACAGTGTGATATTTGTAACTTTCTACGCCATTGCAGCATCTGGATATTGGGTGTTTGGAAACAGGGCAACCTCCAATATTCTGCTGAGCCTGACGCCGGACACTGGACCTCCATTGGCTCCCACTTGGATTCTTGGGCTCGCTGTCATCTTTGTTCTTCTTCAACTCCTCGCCATTGGACTGGTCAGTGCTCACCTCTCATAATTGCTGCTTATGTTTAACTATGAATGATACATGGACAGTGGTGGAAAACGGGCAGGTGTATTCACAAGTGGCATACGAAATAATGGAGAAGCAATCAGCCGACATGAAGAAAGGAATGTTTTCCAAAAGGAACCTTATTCCAAGGCTCATTCTTCGCTCAATATACATGATCATCTGTGGCTTTTTTGCTGCTATGCTTCCATTCTTTGGTGACATTAGTGCTGTGGTGGGTGCTATTTGCTTCATTCCTCTTGATTTCGTTCTACCAATGCTTCTCTATAACATCACCCACAATCCTCCCAAATCCTCCCTCACCTATTCTATCAACCTCGCCATTATTGTCGTTTTCACCGGGGTTGGACTCTTGGGTTCGTTCTCTTCTATACGAAAGCTCGTTCTTGATGCTTCCAAGTTCAAGCTCTTCAGTAATGATGTTGTCGATTGA

mRNA sequence

ATATCAGTTTCGCCTCCCTCTCCGTACCGGCCTTGGATTCCACCACCGCCCGCCGACAGCGACAACTACGATGGGGATTCAGCTTCCGGTCACCGAAGACCGAATCTCCGACGCCGGAGCATCATTCGTCCTCCAATCCAAAGGGGAATGGTGGCATGCGGGATTCCATTTGACGACGGCGATTGTCGGACCGACGATTCTAACGCTGCCGTACGCGTTCAGAGGATTAGGTTGGGGATTAGGGTTTTTCTGCTTGACGATTATGGCCGTTGTGACTTTCTACTCGTATTTCCTCATGTCGAAGGTTCTCGATCACTGCGAGAAGGCCGGTCGCCGTCACATCCGATTCCGGGAACTCGCCGCCGACGTATTAGGATCTGGATGGATGTTTTACTTCGTAATATTCATCCAAACCGCGATCAATACTGGAGTTGGAATTGGAGCAATCTTGCTCTCCGGGCAGTGCCTTCAGATAATATATTCAAACCTTTACCCAAATGGATCCATGAAACTGTACGAGTTCATAGCAATAGTAACAGGAGTGATGATCATTCTGTCTCAGCTTCCAACCTTCCACTCTCTTAGACATGTCAGTCTGGCTTCTCTGCTTCTCAGCTTGGGCTACGCCTTTCTTATTATTGCTGCTTGTATCATTGCAGCAATGAGCAAAGAAGCTCCAGAAAGGGATGTGATATTTGTAACTTTCTACGCCATTGCAGCATCTGGATATTGGGTGTTTGGAAACAGGGCAACCTCCAATATTCTGCTGAGCCTGACGCCGGACACTGGACCTCCATTGGCTCCCACTTGGATTCTTGGGCTCGCTGTCATCTTTGTTCTTCTTCAACTCCTCGCCATTGGACTGGTGTATTCACAAGTGGCATACGAAATAATGGAGAAGCAATCAGCCGACATGAAGAAAGGAATGTTTTCCAAAAGGAACCTTATTCCAAGGCTCATTCTTCGCTCAATATACATGATCATCTGTGGCTTTTTTGCTGCTATGCTTCCATTCTTTGGTGACATTAGTGCTGTGGTGGGTGCTATTTGCTTCATTCCTCTTGATTTCGTTCTACCAATGCTTCTCTATAACATCACCCACAATCCTCCCAAATCCTCCCTCACCTATTCTATCAACCTCGCCATTATTGTCGTTTTCACCGGGGTTGGACTCTTGGGTTCGTTCTCTTCTATACGAAAGCTCGTTCTTGATGCTTCCAAGTTCAAGCTCTTCAGTAATGATGTTGTCGATTGA

Coding sequence (CDS)

ATGGGGATTCAGCTTCCGGTCACCGAAGACCGAATCTCCGACGCCGGAGCATCATTCGTCCTCCAATCCAAAGGGGAATGGTGGCATGCGGGATTCCATTTGACGACGGCGATTGTCGGACCGACGATTCTAACGCTGCCGTACGCGTTCAGAGGATTAGGTTGGGGATTAGGGTTTTTCTGCTTGACGATTATGGCCGTTGTGACTTTCTACTCGTATTTCCTCATGTCGAAGGTTCTCGATCACTGCGAGAAGGCCGGTCGCCGTCACATCCGATTCCGGGAACTCGCCGCCGACGTATTAGGATCTGGATGGATGTTTTACTTCGTAATATTCATCCAAACCGCGATCAATACTGGAGTTGGAATTGGAGCAATCTTGCTCTCCGGGCAGTGCCTTCAGATAATATATTCAAACCTTTACCCAAATGGATCCATGAAACTGTACGAGTTCATAGCAATAGTAACAGGAGTGATGATCATTCTGTCTCAGCTTCCAACCTTCCACTCTCTTAGACATGTCAGTCTGGCTTCTCTGCTTCTCAGCTTGGGCTACGCCTTTCTTATTATTGCTGCTTGTATCATTGCAGCAATGAGCAAAGAAGCTCCAGAAAGGGATGTGATATTTGTAACTTTCTACGCCATTGCAGCATCTGGATATTGGGTGTTTGGAAACAGGGCAACCTCCAATATTCTGCTGAGCCTGACGCCGGACACTGGACCTCCATTGGCTCCCACTTGGATTCTTGGGCTCGCTGTCATCTTTGTTCTTCTTCAACTCCTCGCCATTGGACTGGTGTATTCACAAGTGGCATACGAAATAATGGAGAAGCAATCAGCCGACATGAAGAAAGGAATGTTTTCCAAAAGGAACCTTATTCCAAGGCTCATTCTTCGCTCAATATACATGATCATCTGTGGCTTTTTTGCTGCTATGCTTCCATTCTTTGGTGACATTAGTGCTGTGGTGGGTGCTATTTGCTTCATTCCTCTTGATTTCGTTCTACCAATGCTTCTCTATAACATCACCCACAATCCTCCCAAATCCTCCCTCACCTATTCTATCAACCTCGCCATTATTGTCGTTTTCACCGGGGTTGGACTCTTGGGTTCGTTCTCTTCTATACGAAAGCTCGTTCTTGATGCTTCCAAGTTCAAGCTCTTCAGTAATGATGTTGTCGATTGA

Protein sequence

MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLIIAACIIAAMSKEAPERDVIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSSIRKLVLDASKFKLFSNDVVD

Homology

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BLAST of Carg22240 vs. NCBI nr
Match: XP_023551961.1 (probable GABA transporter 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 732.3 bits (1889), Expect = 9.0e-208
Identity = 389/448 (86.83%), Postives = 394/448 (87.95%), Query Frame = 0


Query: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60
           MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF
Sbjct: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60

Query: 61  CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120
           CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG
Sbjct: 61  CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120

Query: 121 VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180
           VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL
Sbjct: 121 VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180

Query: 181 LSLGYAFLIIAACIIAAMSKEAPERD---------------------------------- 240
           LSLGYAFLI+AACIIAAMSKEAPER+                                  
Sbjct: 181 LSLGYAFLIVAACIIAAMSKEAPEREYSLESSPKSRVFSAFTSISILAAIFGNGILPEIQ 240

Query: 241 --------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 300
                               VIFVTFYAIAASGYWVFGNRA+SNILLSLTPDTGPPLAP+
Sbjct: 241 ATLAAPASGKMVKGLLMCYSVIFVTFYAIAASGYWVFGNRASSNILLSLTPDTGPPLAPS 300

Query: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 360
           WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC
Sbjct: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 360

Query: 361 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 395
           GFFAAMLPFFGDISAVVGAICFIPLDF+LPMLLYNITHNPPKSSLTYSINLAIIVVFTGV
Sbjct: 361 GFFAAMLPFFGDISAVVGAICFIPLDFILPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 420

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BLAST of Carg22240 vs. NCBI nr
Match: XP_022931310.1 (probable GABA transporter 2 [Cucurbita moschata])

HSP 1 Score: 728.4 bits (1879), Expect = 1.3e-206
Identity = 388/448 (86.61%), Postives = 391/448 (87.28%), Query Frame = 0


Query: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60
           MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF
Sbjct: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60

Query: 61  CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120
           CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG
Sbjct: 61  CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120

Query: 121 VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180
           VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL
Sbjct: 121 VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180

Query: 181 LSLGYAFLIIAACIIAAMSKEAPERD---------------------------------- 240
           LSLGYAFLIIAACIIAAMSKEAPER+                                  
Sbjct: 181 LSLGYAFLIIAACIIAAMSKEAPEREYSLESSPKSRVFSAFTSISILAAIFGNGILPEIQ 240

Query: 241 --------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 300
                               VIFVTFYAIAASGYWVFGNRA+SNILLSLTPDTGPPLAP 
Sbjct: 241 ATLAAPASGKMVKGLLMCYCVIFVTFYAIAASGYWVFGNRASSNILLSLTPDTGPPLAPA 300

Query: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 360
           WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD KKGMFSKRNLIPRLILRSIYMIIC
Sbjct: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADTKKGMFSKRNLIPRLILRSIYMIIC 360

Query: 361 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 395
           GFFAAMLPFFGDISAVVGAICFIPLDF+LPMLLYNITHNPPKSSLTYSINLAIIVVFTGV
Sbjct: 361 GFFAAMLPFFGDISAVVGAICFIPLDFILPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 420

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BLAST of Carg22240 vs. NCBI nr
Match: XP_022985395.1 (probable GABA transporter 2 [Cucurbita maxima])

HSP 1 Score: 725.7 bits (1872), Expect = 8.4e-206
Identity = 385/448 (85.94%), Postives = 392/448 (87.50%), Query Frame = 0


Query: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60
           MGIQLPVTEDRISDAGASFVLQSKGEWWH GFHLTTAIVGPTILTLPYAFRGLGWGLGFF
Sbjct: 1   MGIQLPVTEDRISDAGASFVLQSKGEWWHVGFHLTTAIVGPTILTLPYAFRGLGWGLGFF 60

Query: 61  CLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120
           CLTIMAVVTFYSYFLMSKVLD+CEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG
Sbjct: 61  CLTIMAVVTFYSYFLMSKVLDNCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTG 120

Query: 121 VGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180
           VGIGAILLSGQCLQIIYSNL+PNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL
Sbjct: 121 VGIGAILLSGQCLQIIYSNLFPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLL 180

Query: 181 LSLGYAFLIIAACIIAAMSKEAPERD---------------------------------- 240
           LSLGYAFLI+AACIIAAMSKEAPER+                                  
Sbjct: 181 LSLGYAFLIVAACIIAAMSKEAPEREYSLESSPKSRVFSAFTSISILAAIFGNGILPEIQ 240

Query: 241 --------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 300
                               VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAP 
Sbjct: 241 ATLAAPASGKMVKGLLMCYSVIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPA 300

Query: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 360
           WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD+KKGMFSKRNLIPRLILRSIYMIIC
Sbjct: 301 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADVKKGMFSKRNLIPRLILRSIYMIIC 360

Query: 361 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 395
           GFFAAMLPFFGDISAVVGAICFIPLDF+LPMLLYNITHNPPKSSLTYSINLAIIVVFTGV
Sbjct: 361 GFFAAMLPFFGDISAVVGAICFIPLDFILPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 420

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BLAST of Carg22240 vs. NCBI nr
Match: XP_004149753.1 (PREDICTED: probable GABA transporter 2 [Cucumis sativus] >KGN53392.1 hypothetical protein Csa_4G051440 [Cucumis sativus])

HSP 1 Score: 667.2 bits (1720), Expect = 3.5e-188
Identity = 355/451 (78.71%), Postives = 377/451 (83.59%), Query Frame = 0


Query: 4   QLPVTED------RISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL 63
           Q P+T D      R +DAGA+FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL
Sbjct: 4   QPPITHDLFTDTERQNDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL 63

Query: 64  GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI 123
           GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI
Sbjct: 64  GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI 123

Query: 124 NTGVGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLA 183
           NTGVGIGAILL+GQCL+I+YS+L PNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHV+L 
Sbjct: 124 NTGVGIGAILLAGQCLEILYSSLNPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVNLG 183

Query: 184 SLLLSLGYAFLIIAACIIAAMSKEAPERD------------------------------- 243
           SLLLSLGYAFL++AACIIAA SKEAP R+                               
Sbjct: 184 SLLLSLGYAFLVVAACIIAARSKEAPTREYTLESSPKSRTFSAFTSISILAAIFGNGILP 243

Query: 244 -----------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPL 303
                                  VIFVTFYAIA SGYWVFGN+ATSNIL SL PD+GP L
Sbjct: 244 EIQATLAPPASGKMVKGLIMCYSVIFVTFYAIAGSGYWVFGNKATSNILQSLLPDSGPSL 303

Query: 304 APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYM 363
           APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD+KKGMFSKRNLIPRLILR++YM
Sbjct: 304 APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADVKKGMFSKRNLIPRLILRTLYM 363

Query: 364 IICGFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVF 395
           I+CGFFAAMLPFFGDISAVVGAI FIPLDF+LPMLLYNITHNPPKSSLTYSINLAII VF
Sbjct: 364 IMCGFFAAMLPFFGDISAVVGAIGFIPLDFILPMLLYNITHNPPKSSLTYSINLAIIFVF 423

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BLAST of Carg22240 vs. NCBI nr
Match: XP_008451960.1 (PREDICTED: probable GABA transporter 2 [Cucumis melo])

HSP 1 Score: 663.3 bits (1710), Expect = 5.1e-187
Identity = 352/449 (78.40%), Postives = 373/449 (83.07%), Query Frame = 0


Query: 6   PVTED------RISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF 65
           P+T D      R +DAGA+FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF
Sbjct: 7   PITHDLFTDTERQNDAGATFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF 66

Query: 66  FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT 125
           FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT
Sbjct: 67  FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT 126

Query: 126 GVGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASL 185
           GVGIGAILL+GQCL+IIYS+L PNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHV+L SL
Sbjct: 127 GVGIGAILLAGQCLEIIYSSLNPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVNLGSL 186

Query: 186 LLSLGYAFLIIAACIIAAMSKEAPERD--------------------------------- 245
           LLSLGYAFL++ ACIIAA SKEAP R+                                 
Sbjct: 187 LLSLGYAFLVVVACIIAARSKEAPTREYSLESSTKSRAFSAFTSISILAAIFGNGILPEI 246

Query: 246 ---------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAP 305
                                VIFVTFYAIA SGYWVFGN+ATSNIL SL PD GP LAP
Sbjct: 247 QATLAPPASGKMVKGLVMCYSVIFVTFYAIAGSGYWVFGNKATSNILQSLMPDNGPSLAP 306

Query: 306 TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMII 365
           TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD+KKGMFSKRNLIPRLILR++YMI+
Sbjct: 307 TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADVKKGMFSKRNLIPRLILRTLYMIM 366

Query: 366 CGFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTG 395
           CGFFAAMLPFFGDISAVVGAI FIPLDF+LPMLLYNITHNPPKSSLTYS NLAII+VF+G
Sbjct: 367 CGFFAAMLPFFGDISAVVGAIGFIPLDFILPMLLYNITHNPPKSSLTYSTNLAIIIVFSG 426

[Close]

BLAST of Carg22240 vs. TAIR10
Match: AT5G41800.1 (Transmembrane amino acid transporter family protein)

HSP 1 Score: 562.4 bits (1448), Expect = 2.2e-160
Identity = 295/436 (67.66%), Postives = 339/436 (77.75%), Query Frame = 0


Query: 13  SDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVTFYS 72
           SDAGA FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGW LGF CLT M +VTFY+
Sbjct: 17  SDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWWLGFVCLTTMGLVTFYA 76

Query: 73  YFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLSGQC 132
           Y+LMSKVLDHCEK+GRRHIRFRELAADVLGSG MFY VIFIQTAINTG+GIGAILL+GQC
Sbjct: 77  YYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFYVVIFIQTAINTGIGIGAILLAGQC 136

Query: 133 LQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLIIAA 192
           L I+YS+L+P G++KLYEFIA+VT VM++LSQLP+FHSLRH++ ASLLLSLGY FL++ A
Sbjct: 137 LDIMYSSLFPQGTLKLYEFIAMVTVVMMVLSQLPSFHSLRHINCASLLLSLGYTFLVVGA 196

Query: 193 CIIAAMSKEAPERD---------------------------------------------- 252
           CI   +SK AP+R+                                              
Sbjct: 197 CINLGLSKNAPKREYSLEHSDSGKVFSAFTSISIIAAIFGNGILPEIQATLAPPATGKML 256

Query: 253 --------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILGLAVIFVLL 312
                   VIF TFY+ A SGYWVFGN ++SNIL +L PD GP LAP  ++GLAVIFVLL
Sbjct: 257 KGLLLCYSVIFFTFYSAAISGYWVFGNNSSSNILKNLMPDEGPTLAPIVVIGLAVIFVLL 316

Query: 313 QLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLPFFGD 372
           QL AIGLVYSQVAYEIMEK+SAD  KG+FSKRNL+PRLILR++YM  CGF AAMLPFFGD
Sbjct: 317 QLFAIGLVYSQVAYEIMEKKSADTTKGIFSKRNLVPRLILRTLYMAFCGFMAAMLPFFGD 376

Query: 373 ISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSSIRKL 395
           I+AVVGA  FIPLDFVLPMLLYN+T+ P + S TY IN+ I+VVFT  GL+G+FSSIRKL
Sbjct: 377 INAVVGAFGFIPLDFVLPMLLYNMTYKPTRRSFTYWINMTIMVVFTCAGLMGAFSSIRKL 436

[Close]

BLAST of Carg22240 vs. TAIR10
Match: AT1G08230.2 (Transmembrane amino acid transporter family protein)

HSP 1 Score: 315.8 bits (808), Expect = 3.6e-86
Identity = 174/436 (39.91%), Postives = 255/436 (58.49%), Query Frame = 0


Query: 10  DRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVT 69
           + + DAG+ FVL+SKG WWH GFHLTT+IV P +L+LPYAF+ LGW  G  CL   A VT
Sbjct: 15  EEVVDAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVT 74

Query: 70  FYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLS 129
           FYSY L+S  L+H    G R++RFR++A  +L   W  Y+V  IQ A+  GV I   LL 
Sbjct: 75  FYSYTLLSLTLEHHASLGNRYLRFRDMAHHILSPKWGRYYVGPIQMAVCYGVVIANALLG 134

Query: 130 GQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLI 189
           GQCL+ +Y  + PNG MKL+EF+ I   ++++L+Q P+FHSLR+++  SLLL L Y+   
Sbjct: 135 GQCLKAMYLVVQPNGEMKLFEFVIIFGCLLLVLAQFPSFHSLRYINSLSLLLCLLYSASA 194

Query: 190 IAACIIAAMSKEAPERD------------------------------------------- 249
            AA I       APE+D                                           
Sbjct: 195 AAASIYIGKEPNAPEKDYTIVGDPETRVFGIFNAMAIIATTYGNGIIPEIQATISAPVKG 254

Query: 250 -----------VIFVTFYAIAASGYWVFGNRATSNILLS-LTPDTGPPLAPTWILGLAVI 309
                      V+ +TF+ +A +GYW FG +A   I  + L  +T     PTW + L  +
Sbjct: 255 KMMKGLCMCYLVVIMTFFTVAITGYWAFGKKANGLIFTNFLNAETNHYFVPTWFIFLVNL 314

Query: 310 FVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLP 369
           F +LQL A+ +VY Q   +I+E   +D  K  FS RN+IPRL++RS+++++    AAMLP
Sbjct: 315 FTVLQLSAVAVVYLQPINDILESVISDPTKKEFSIRNVIPRLVVRSLFVVMATIVAAMLP 374

Query: 370 FFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSS 391
           FFGD+++++GA  FIPLDFVLP++ +N T  P K S  + IN  I VVF+ +G++   ++
Sbjct: 375 FFGDVNSLLGAFGFIPLDFVLPVVFFNFTFKPSKKSFIFWINTVIAVVFSCLGVIAMVAA 434

[Close]

BLAST of Carg22240 vs. TAIR10
Match: AT5G40780.1 (lysine histidine transporter 1)

HSP 1 Score: 137.1 bits (344), Expect = 2.3e-32
Identity = 117/443 (26.41%), Postives = 191/443 (43.12%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L LPYA   LGWG G   L +
Sbjct: 28  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVL 87

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             V+T Y+ + M ++  H    G+R  R+ EL     G     Y V+  Q  +  GV I 
Sbjct: 88  SWVITLYTLWQMVEM--HEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEIGVCIV 147

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G+ L+  +  +  +   +KL  FI I   V  +LS LP F+S+  VSLA+ ++SL
Sbjct: 148 YMVTGGKSLKKFHELVCDDCKPIKLTYFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSL 207

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  A+                                             I A   
Sbjct: 208 SYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVAFAYAGHNVVLEIQATIP 267

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE+               V+ + ++ +A  GY++FGN    NIL+SL         P 
Sbjct: 268 STPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNILMSLK-------KPA 327

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++  A IFV++ ++    +Y+   +++ME  +  +KK  F     + R  +R+ Y+   
Sbjct: 328 WLIATANIFVVIHVIGSYQIYAMPVFDMME--TLLVKKLNFRPTTTL-RFFVRNFYVAAT 387

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
            F     PFFG + A  G   F P  + LP +++   + P K SL++  N   IV    +
Sbjct: 388 MFVGMTFPFFGGLLAFFGGFAFAPTTYFLPCVIWLAIYKPKKYSLSWWANWVCIVFGLFL 446

[Close]

BLAST of Carg22240 vs. TAIR10
Match: AT1G67640.1 (Transmembrane amino acid transporter family protein)

HSP 1 Score: 135.6 bits (340), Expect = 6.7e-32
Identity = 110/443 (24.83%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L+LPYA   LGWG G   + +
Sbjct: 23  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIM 82

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             ++TFY+ + M ++  H    G+R  R+ EL     G     + V+  Q  +  GV I 
Sbjct: 83  SWLITFYTLWQMVQM--HEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIV 142

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G+ L+ I+  L  +  +++   +I I   +  +L+ LP F+S+  VSLA+ ++SL
Sbjct: 143 YMVTGGKSLKKIHDLLCTDCKNIRTTYWIMIFASIHFVLAHLPNFNSISIVSLAAAVMSL 202

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  A  +                                           I A   
Sbjct: 203 SYSTIAWATSVKKGVHPNVDYSSRASTTSGNVFNFLNALGDVAFAYAGHNVVLEIQATIP 262

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE+               V+ + ++ +A   Y++FGN    NIL++L         P 
Sbjct: 263 STPEKPSKIAMWKGVVVAYIVVAICYFPVAFVCYYIFGNSVDDNILMTLE-------KPI 322

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++ +A  FV++ ++    +Y+   ++++E  +  +KK MF+    + R I R++Y+   
Sbjct: 323 WLIAIANAFVVVHVIGSYQIYAMPVFDMLE--TFLVKKMMFAPSFKL-RFITRTLYVAFT 382

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
            F A  +PFFG +    G   F P  + LP +++     P K  L++ IN   IVV   +
Sbjct: 383 MFVAICIPFFGGLLGFFGGFAFAPTTYYLPCIMWLCIKKPKKYGLSWCINWFCIVVGVIL 441

[Close]

BLAST of Carg22240 vs. TAIR10
Match: AT1G24400.1 (lysine histidine transporter 2)

HSP 1 Score: 133.3 bits (334), Expect = 3.3e-31
Identity = 106/443 (23.93%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L+LPYA   LGWG G   + +
Sbjct: 23  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMVM 82

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             ++T Y+ + M ++  H    G+R  R+ EL     G     + V+  Q  +  GV I 
Sbjct: 83  SWIITLYTLWQMVEM--HEIVPGKRLDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIV 142

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G  L+ ++  + P+   ++   +I I   V  ++S LP F+S+  +SLA+ ++SL
Sbjct: 143 YMVTGGASLKKVHQLVCPDCKEIRTTFWIMIFASVHFVISHLPNFNSISIISLAAAVMSL 202

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  AA +                                           I A   
Sbjct: 203 TYSTIAWAASVHKGVHPDVDYSPRASTDVGKVFNFLNALGDVAFAYAGHNVVLEIQATIP 262

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE                V+ + ++ +A  GY++FGN    NIL++L         P 
Sbjct: 263 STPEMPSKVPMWRGVIVAYIVVAICYFPVAFLGYYIFGNSVDDNILITLE-------KPI 322

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++ +A +FV++ ++    +++   ++++E  +  +KK  F+    + R I RS+Y+   
Sbjct: 323 WLIAMANMFVVIHVIGSYQIFAMPVFDMLE--TVLVKKMNFNPSFKL-RFITRSLYVAFT 382

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
              A  +PFFG +    G   F P  + LP +++ +   P +  L+++ N   I+V   +
Sbjct: 383 MIVAICVPFFGGLLGFFGGFAFAPTTYYLPCIMWLVLKKPKRFGLSWTANWFCIIVGVLL 441

[Close]

BLAST of Carg22240 vs. Swiss-Prot
Match: sp|Q8L4X4|GAT2_ARATH (Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 4.0e-159
Identity = 295/436 (67.66%), Postives = 339/436 (77.75%), Query Frame = 0


Query: 13  SDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVTFYS 72
           SDAGA FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGW LGF CLT M +VTFY+
Sbjct: 17  SDAGALFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWWLGFVCLTTMGLVTFYA 76

Query: 73  YFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLSGQC 132
           Y+LMSKVLDHCEK+GRRHIRFRELAADVLGSG MFY VIFIQTAINTG+GIGAILL+GQC
Sbjct: 77  YYLMSKVLDHCEKSGRRHIRFRELAADVLGSGLMFYVVIFIQTAINTGIGIGAILLAGQC 136

Query: 133 LQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLIIAA 192
           L I+YS+L+P G++KLYEFIA+VT VM++LSQLP+FHSLRH++ ASLLLSLGY FL++ A
Sbjct: 137 LDIMYSSLFPQGTLKLYEFIAMVTVVMMVLSQLPSFHSLRHINCASLLLSLGYTFLVVGA 196

Query: 193 CIIAAMSKEAPERD---------------------------------------------- 252
           CI   +SK AP+R+                                              
Sbjct: 197 CINLGLSKNAPKREYSLEHSDSGKVFSAFTSISIIAAIFGNGILPEIQATLAPPATGKML 256

Query: 253 --------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILGLAVIFVLL 312
                   VIF TFY+ A SGYWVFGN ++SNIL +L PD GP LAP  ++GLAVIFVLL
Sbjct: 257 KGLLLCYSVIFFTFYSAAISGYWVFGNNSSSNILKNLMPDEGPTLAPIVVIGLAVIFVLL 316

Query: 313 QLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLPFFGD 372
           QL AIGLVYSQVAYEIMEK+SAD  KG+FSKRNL+PRLILR++YM  CGF AAMLPFFGD
Sbjct: 317 QLFAIGLVYSQVAYEIMEKKSADTTKGIFSKRNLVPRLILRTLYMAFCGFMAAMLPFFGD 376

Query: 373 ISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSSIRKL 395
           I+AVVGA  FIPLDFVLPMLLYN+T+ P + S TY IN+ I+VVFT  GL+G+FSSIRKL
Sbjct: 377 INAVVGAFGFIPLDFVLPMLLYNMTYKPTRRSFTYWINMTIMVVFTCAGLMGAFSSIRKL 436

[Close]

BLAST of Carg22240 vs. Swiss-Prot
Match: sp|F4HW02|GAT1_ARATH (GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1)

HSP 1 Score: 315.8 bits (808), Expect = 6.6e-85
Identity = 174/436 (39.91%), Postives = 255/436 (58.49%), Query Frame = 0


Query: 10  DRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVT 69
           + + DAG+ FVL+SKG WWH GFHLTT+IV P +L+LPYAF+ LGW  G  CL   A VT
Sbjct: 15  EEVVDAGSLFVLKSKGTWWHCGFHLTTSIVAPALLSLPYAFKFLGWAAGISCLVGGAAVT 74

Query: 70  FYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLS 129
           FYSY L+S  L+H    G R++RFR++A  +L   W  Y+V  IQ A+  GV I   LL 
Sbjct: 75  FYSYTLLSLTLEHHASLGNRYLRFRDMAHHILSPKWGRYYVGPIQMAVCYGVVIANALLG 134

Query: 130 GQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLI 189
           GQCL+ +Y  + PNG MKL+EF+ I   ++++L+Q P+FHSLR+++  SLLL L Y+   
Sbjct: 135 GQCLKAMYLVVQPNGEMKLFEFVIIFGCLLLVLAQFPSFHSLRYINSLSLLLCLLYSASA 194

Query: 190 IAACIIAAMSKEAPERD------------------------------------------- 249
            AA I       APE+D                                           
Sbjct: 195 AAASIYIGKEPNAPEKDYTIVGDPETRVFGIFNAMAIIATTYGNGIIPEIQATISAPVKG 254

Query: 250 -----------VIFVTFYAIAASGYWVFGNRATSNILLS-LTPDTGPPLAPTWILGLAVI 309
                      V+ +TF+ +A +GYW FG +A   I  + L  +T     PTW + L  +
Sbjct: 255 KMMKGLCMCYLVVIMTFFTVAITGYWAFGKKANGLIFTNFLNAETNHYFVPTWFIFLVNL 314

Query: 310 FVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLP 369
           F +LQL A+ +VY Q   +I+E   +D  K  FS RN+IPRL++RS+++++    AAMLP
Sbjct: 315 FTVLQLSAVAVVYLQPINDILESVISDPTKKEFSIRNVIPRLVVRSLFVVMATIVAAMLP 374

Query: 370 FFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSS 391
           FFGD+++++GA  FIPLDFVLP++ +N T  P K S  + IN  I VVF+ +G++   ++
Sbjct: 375 FFGDVNSLLGAFGFIPLDFVLPVVFFNFTFKPSKKSFIFWINTVIAVVFSCLGVIAMVAA 434

[Close]

BLAST of Carg22240 vs. Swiss-Prot
Match: sp|Q9FKS8|LHT1_ARATH (Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 4.2e-31
Identity = 117/443 (26.41%), Postives = 191/443 (43.12%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L LPYA   LGWG G   L +
Sbjct: 28  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLGLPYAMSQLGWGPGIAVLVL 87

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             V+T Y+ + M ++  H    G+R  R+ EL     G     Y V+  Q  +  GV I 
Sbjct: 88  SWVITLYTLWQMVEM--HEMVPGKRFDRYHELGQHAFGEKLGLYIVVPQQLIVEIGVCIV 147

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G+ L+  +  +  +   +KL  FI I   V  +LS LP F+S+  VSLA+ ++SL
Sbjct: 148 YMVTGGKSLKKFHELVCDDCKPIKLTYFIMIFASVHFVLSHLPNFNSISGVSLAAAVMSL 207

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  A+                                             I A   
Sbjct: 208 SYSTIAWASSASKGVQEDVQYGYKAKTTAGTVFNFFSGLGDVAFAYAGHNVVLEIQATIP 267

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE+               V+ + ++ +A  GY++FGN    NIL+SL         P 
Sbjct: 268 STPEKPSKGPMWRGVIVAYIVVALCYFPVALVGYYIFGNGVEDNILMSLK-------KPA 327

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++  A IFV++ ++    +Y+   +++ME  +  +KK  F     + R  +R+ Y+   
Sbjct: 328 WLIATANIFVVIHVIGSYQIYAMPVFDMME--TLLVKKLNFRPTTTL-RFFVRNFYVAAT 387

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
            F     PFFG + A  G   F P  + LP +++   + P K SL++  N   IV    +
Sbjct: 388 MFVGMTFPFFGGLLAFFGGFAFAPTTYFLPCVIWLAIYKPKKYSLSWWANWVCIVFGLFL 446

[Close]

BLAST of Carg22240 vs. Swiss-Prot
Match: sp|Q9SR44|LHTL2_ARATH (Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640 PE=2 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 1.2e-30
Identity = 110/443 (24.83%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L+LPYA   LGWG G   + +
Sbjct: 23  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMIM 82

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             ++TFY+ + M ++  H    G+R  R+ EL     G     + V+  Q  +  GV I 
Sbjct: 83  SWLITFYTLWQMVQM--HEMVPGKRFDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIV 142

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G+ L+ I+  L  +  +++   +I I   +  +L+ LP F+S+  VSLA+ ++SL
Sbjct: 143 YMVTGGKSLKKIHDLLCTDCKNIRTTYWIMIFASIHFVLAHLPNFNSISIVSLAAAVMSL 202

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  A  +                                           I A   
Sbjct: 203 SYSTIAWATSVKKGVHPNVDYSSRASTTSGNVFNFLNALGDVAFAYAGHNVVLEIQATIP 262

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE+               V+ + ++ +A   Y++FGN    NIL++L         P 
Sbjct: 263 STPEKPSKIAMWKGVVVAYIVVAICYFPVAFVCYYIFGNSVDDNILMTLE-------KPI 322

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++ +A  FV++ ++    +Y+   ++++E  +  +KK MF+    + R I R++Y+   
Sbjct: 323 WLIAIANAFVVVHVIGSYQIYAMPVFDMLE--TFLVKKMMFAPSFKL-RFITRTLYVAFT 382

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
            F A  +PFFG +    G   F P  + LP +++     P K  L++ IN   IVV   +
Sbjct: 383 MFVAICIPFFGGLLGFFGGFAFAPTTYYLPCIMWLCIKKPKKYGLSWCINWFCIVVGVIL 441

[Close]

BLAST of Carg22240 vs. Swiss-Prot
Match: sp|Q9LRB5|LHT2_ARATH (Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1)

HSP 1 Score: 133.3 bits (334), Expect = 6.0e-30
Identity = 106/443 (23.93%), Postives = 197/443 (44.47%), Query Frame = 0


Query: 5   LPVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 64
           LP+T  R              +WW++ FH  TA+VG  +L+LPYA   LGWG G   + +
Sbjct: 23  LPITSSR------------NAKWWYSAFHNVTAMVGAGVLSLPYAMSNLGWGPGVTIMVM 82

Query: 65  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 124
             ++T Y+ + M ++  H    G+R  R+ EL     G     + V+  Q  +  GV I 
Sbjct: 83  SWIITLYTLWQMVEM--HEIVPGKRLDRYHELGQHAFGEKLGLWIVVPQQLIVEVGVDIV 142

Query: 125 AILLSGQCLQIIYSNLYPN-GSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSL 184
            ++  G  L+ ++  + P+   ++   +I I   V  ++S LP F+S+  +SLA+ ++SL
Sbjct: 143 YMVTGGASLKKVHQLVCPDCKEIRTTFWIMIFASVHFVISHLPNFNSISIISLAAAVMSL 202

Query: 185 GYAFLIIAACI-------------------------------------------IAAMSK 244
            Y+ +  AA +                                           I A   
Sbjct: 203 TYSTIAWAASVHKGVHPDVDYSPRASTDVGKVFNFLNALGDVAFAYAGHNVVLEIQATIP 262

Query: 245 EAPERD--------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPT 304
             PE                V+ + ++ +A  GY++FGN    NIL++L         P 
Sbjct: 263 STPEMPSKVPMWRGVIVAYIVVAICYFPVAFLGYYIFGNSVDDNILITLE-------KPI 322

Query: 305 WILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIIC 364
           W++ +A +FV++ ++    +++   ++++E  +  +KK  F+    + R I RS+Y+   
Sbjct: 323 WLIAMANMFVVIHVIGSYQIFAMPVFDMLE--TVLVKKMNFNPSFKL-RFITRSLYVAFT 382

Query: 365 GFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGV 390
              A  +PFFG +    G   F P  + LP +++ +   P +  L+++ N   I+V   +
Sbjct: 383 MIVAICVPFFGGLLGFFGGFAFAPTTYYLPCIMWLVLKKPKRFGLSWTANWFCIIVGVLL 441

[Close]

BLAST of Carg22240 vs. TrEMBL
Match: tr|A0A0A0KYC5|A0A0A0KYC5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051440 PE=4 SV=1)

HSP 1 Score: 667.2 bits (1720), Expect = 2.3e-188
Identity = 355/451 (78.71%), Postives = 377/451 (83.59%), Query Frame = 0


Query: 4   QLPVTED------RISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL 63
           Q P+T D      R +DAGA+FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL
Sbjct: 4   QPPITHDLFTDTERQNDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGL 63

Query: 64  GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI 123
           GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI
Sbjct: 64  GFFCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAI 123

Query: 124 NTGVGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLA 183
           NTGVGIGAILL+GQCL+I+YS+L PNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHV+L 
Sbjct: 124 NTGVGIGAILLAGQCLEILYSSLNPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVNLG 183

Query: 184 SLLLSLGYAFLIIAACIIAAMSKEAPERD------------------------------- 243
           SLLLSLGYAFL++AACIIAA SKEAP R+                               
Sbjct: 184 SLLLSLGYAFLVVAACIIAARSKEAPTREYTLESSPKSRTFSAFTSISILAAIFGNGILP 243

Query: 244 -----------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPL 303
                                  VIFVTFYAIA SGYWVFGN+ATSNIL SL PD+GP L
Sbjct: 244 EIQATLAPPASGKMVKGLIMCYSVIFVTFYAIAGSGYWVFGNKATSNILQSLLPDSGPSL 303

Query: 304 APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYM 363
           APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD+KKGMFSKRNLIPRLILR++YM
Sbjct: 304 APTWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADVKKGMFSKRNLIPRLILRTLYM 363

Query: 364 IICGFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVF 395
           I+CGFFAAMLPFFGDISAVVGAI FIPLDF+LPMLLYNITHNPPKSSLTYSINLAII VF
Sbjct: 364 IMCGFFAAMLPFFGDISAVVGAIGFIPLDFILPMLLYNITHNPPKSSLTYSINLAIIFVF 423

[Close]

BLAST of Carg22240 vs. TrEMBL
Match: tr|A0A1S3BTV4|A0A1S3BTV4_CUCME (probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103493108 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 3.4e-187
Identity = 352/449 (78.40%), Postives = 373/449 (83.07%), Query Frame = 0


Query: 6   PVTED------RISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF 65
           P+T D      R +DAGA+FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF
Sbjct: 7   PITHDLFTDTERQNDAGATFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF 66

Query: 66  FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT 125
           FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT
Sbjct: 67  FCLTIMAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINT 126

Query: 126 GVGIGAILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASL 185
           GVGIGAILL+GQCL+IIYS+L PNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHV+L SL
Sbjct: 127 GVGIGAILLAGQCLEIIYSSLNPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVNLGSL 186

Query: 186 LLSLGYAFLIIAACIIAAMSKEAPERD--------------------------------- 245
           LLSLGYAFL++ ACIIAA SKEAP R+                                 
Sbjct: 187 LLSLGYAFLVVVACIIAARSKEAPTREYSLESSTKSRAFSAFTSISILAAIFGNGILPEI 246

Query: 246 ---------------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAP 305
                                VIFVTFYAIA SGYWVFGN+ATSNIL SL PD GP LAP
Sbjct: 247 QATLAPPASGKMVKGLVMCYSVIFVTFYAIAGSGYWVFGNKATSNILQSLMPDNGPSLAP 306

Query: 306 TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMII 365
           TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSAD+KKGMFSKRNLIPRLILR++YMI+
Sbjct: 307 TWILGLAVIFVLLQLLAIGLVYSQVAYEIMEKQSADVKKGMFSKRNLIPRLILRTLYMIM 366

Query: 366 CGFFAAMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTG 395
           CGFFAAMLPFFGDISAVVGAI FIPLDF+LPMLLYNITHNPPKSSLTYS NLAII+VF+G
Sbjct: 367 CGFFAAMLPFFGDISAVVGAIGFIPLDFILPMLLYNITHNPPKSSLTYSTNLAIIIVFSG 426

[Close]

BLAST of Carg22240 vs. TrEMBL
Match: tr|B9RCQ1|B9RCQ1_RICCO (Amino acid transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_1691270 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 2.9e-170
Identity = 313/435 (71.95%), Postives = 351/435 (80.69%), Query Frame = 0


Query: 14  DAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIMAVVTFYSY 73
           DAGA+FVL+SKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLT+M VVTFYSY
Sbjct: 18  DAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTVMGVVTFYSY 77

Query: 74  FLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLSGQCL 133
           FLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILL+G+CL
Sbjct: 78  FLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGAILLAGECL 137

Query: 134 QIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGYAFLIIAAC 193
           QI+YSN+YP+G +KL+EFIA+VT VM++LSQLPTFHSLRH+++ASLLLSLGY FL++ AC
Sbjct: 138 QIMYSNIYPSGPLKLFEFIAMVTAVMVVLSQLPTFHSLRHLNMASLLLSLGYTFLVVGAC 197

Query: 194 IIAAMSKEAPERD----------------------------------------------- 253
           I A +SK AP RD                                               
Sbjct: 198 ISAGLSKNAPPRDYSLESSESARVFSAFTSISIIAAIFGNGILPEIQATLAPPATGKMVK 257

Query: 254 -------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILGLAVIFVLLQ 313
                  VI VTFY+ A SGYWVFGN++ SNIL SL PD GP LAPTW+LGL VIFVLLQ
Sbjct: 258 GLLMCYIVIVVTFYSAAVSGYWVFGNKSNSNILKSLLPDEGPALAPTWVLGLGVIFVLLQ 317

Query: 314 LLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAAMLPFFGDI 373
           L AIGLVYSQVAYEIMEK SAD+ +GMFSKRNLIPRLILR++Y+I CGF AAMLPFFGDI
Sbjct: 318 LFAIGLVYSQVAYEIMEKNSADVNQGMFSKRNLIPRLILRTLYVIFCGFMAAMLPFFGDI 377

Query: 374 SAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGSFSSIRKLV 395
           + VVGAI FIPLDFVLPMLLYN+T+ P +SSLTY IN++IIVVFTG G++G+FSSIRKLV
Sbjct: 378 NGVVGAIGFIPLDFVLPMLLYNMTYKPRRSSLTYWINISIIVVFTGAGIMGAFSSIRKLV 437

[Close]

BLAST of Carg22240 vs. TrEMBL
Match: tr|A0A2P5B679|A0A2P5B679_PARAD (Amino acid transporter, transmembrane domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_268000 PE=4 SV=1)

HSP 1 Score: 607.1 bits (1564), Expect = 2.9e-170
Identity = 314/443 (70.88%), Postives = 360/443 (81.26%), Query Frame = 0


Query: 6   PVTEDRISDAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTIM 65
           PVT  R +DAGA+FVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGF CLT+M
Sbjct: 12  PVT-TRQNDAGAAFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFLCLTVM 71

Query: 66  AVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIGA 125
           A+VTFY+YFLMSKVLDHCEKAGRRHIRFRELA+DVLGSGWMFYFVIFIQTAINTGVGIGA
Sbjct: 72  AMVTFYAYFLMSKVLDHCEKAGRRHIRFRELASDVLGSGWMFYFVIFIQTAINTGVGIGA 131

Query: 126 ILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLGY 185
           ILL+GQC+QI+Y  L PNGS+KLY FIA+VT +MI+LSQLPTFHSLRH++L SL+LSLGY
Sbjct: 132 ILLAGQCIQIMYDELSPNGSLKLYHFIAMVTVIMIVLSQLPTFHSLRHINLGSLVLSLGY 191

Query: 186 AFLIIAACIIAAMSKEAPERD--------------------------------------- 245
           +FL++ ACI AA S +AP RD                                       
Sbjct: 192 SFLLVGACINAATSGKAPPRDYSLESSKSARVFSAFSSISILAAIYGNGILPEIQATLAP 251

Query: 246 ---------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILGL 305
                          VIF+TFY++A SGYWVFGN++ SNIL SL PD GP LAPTW+LGL
Sbjct: 252 PATGKMVKGLMMCYAVIFITFYSVAVSGYWVFGNKSNSNILESLMPDEGPALAPTWVLGL 311

Query: 306 AVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFAA 365
           AV+FVLLQLLAIGLVYSQVAYEIMEK+SAD K+G+FSKRNLIPRLILR++YMI+CGFFAA
Sbjct: 312 AVVFVLLQLLAIGLVYSQVAYEIMEKKSADTKQGIFSKRNLIPRLILRTLYMILCGFFAA 371

Query: 366 MLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLGS 395
           MLPFFGDIS+VVGAI FIPLDFVLPMLLYN T+ PP+SSLTY IN++II+VFTG G++G+
Sbjct: 372 MLPFFGDISSVVGAIGFIPLDFVLPMLLYNKTYKPPRSSLTYLINISIIIVFTGAGIMGT 431

[Close]

BLAST of Carg22240 vs. TrEMBL
Match: tr|A0A2C9WHU3|A0A2C9WHU3_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G045500 PE=4 SV=1)

HSP 1 Score: 606.3 bits (1562), Expect = 4.9e-170
Identity = 313/444 (70.50%), Postives = 356/444 (80.18%), Query Frame = 0


Query: 6   PVTEDRIS-DAGASFVLQSKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTI 65
           P  E R+  DAGA+FVL+SKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLT+
Sbjct: 9   PFPESRLEVDAGAAFVLESKGEWWHAGFHLTTAIVGPTILTLPYAFRGLGWGLGFFCLTV 68

Query: 66  MAVVTFYSYFLMSKVLDHCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVGIG 125
           M VVTFYSY+LMSKVLD+CEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGV IG
Sbjct: 69  MGVVTFYSYYLMSKVLDYCEKAGRRHIRFRELAADVLGSGWMFYFVIFIQTAINTGVSIG 128

Query: 126 AILLSGQCLQIIYSNLYPNGSMKLYEFIAIVTGVMIILSQLPTFHSLRHVSLASLLLSLG 185
           AILL+G+C+QI+YSNL PNGS+KLYEFIA+VT VM++LSQLP+FHSLRH+++ASLLLSLG
Sbjct: 129 AILLAGECIQIMYSNLSPNGSLKLYEFIAMVTAVMVVLSQLPSFHSLRHLNMASLLLSLG 188

Query: 186 YAFLIIAACIIAAMSKEAPERD-------------------------------------- 245
           Y FL++ ACI A +SK AP++D                                      
Sbjct: 189 YTFLVVGACIHAGLSKSAPKKDYTLESSESARVFNAFTSISIIAAIFGNGILPEIQATLA 248

Query: 246 ----------------VIFVTFYAIAASGYWVFGNRATSNILLSLTPDTGPPLAPTWILG 305
                           VI VTFY+ A SGYWVFGN++ SNIL SL PD GP LAPTW+LG
Sbjct: 249 PPATGKMVKGLLMCYSVILVTFYSAAVSGYWVFGNKSNSNILKSLMPDEGPSLAPTWVLG 308

Query: 306 LAVIFVLLQLLAIGLVYSQVAYEIMEKQSADMKKGMFSKRNLIPRLILRSIYMIICGFFA 365
           L V+FVLLQL AIGLVYSQVAYEIMEKQSAD+K+GMFSKRNLIPRLILR++Y+  CGF A
Sbjct: 309 LGVVFVLLQLFAIGLVYSQVAYEIMEKQSADVKQGMFSKRNLIPRLILRTLYVTFCGFMA 368

Query: 366 AMLPFFGDISAVVGAICFIPLDFVLPMLLYNITHNPPKSSLTYSINLAIIVVFTGVGLLG 395
           AMLPFFGDI+ VVGAI FIPLDFVLPMLLYN+T+ P KSSLTY IN++II+VFTG G++G
Sbjct: 369 AMLPFFGDINGVVGAIGFIPLDFVLPMLLYNMTYKPQKSSLTYWINISIIIVFTGAGIMG 428

The following BLAST results are available for this feature:

BLAST of Carg22240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023551961.1	9.0e-208	86.83	probable GABA transporter 2 [Cucurbita pepo subsp. pepo]	[more]
XP_022931310.1	1.3e-206	86.61	probable GABA transporter 2 [Cucurbita moschata]	[more]
XP_022985395.1	8.4e-206	85.94	probable GABA transporter 2 [Cucurbita maxima]	[more]
XP_004149753.1	3.5e-188	78.71	PREDICTED: probable GABA transporter 2 [Cucumis sativus] >KGN53392.1 hypothetica...	[more]
XP_008451960.1	5.1e-187	78.40	PREDICTED: probable GABA transporter 2 [Cucumis melo]	[more]

BLAST of Carg22240 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G41800.1	2.2e-160	67.66	Transmembrane amino acid transporter family protein	[more]
AT1G08230.2	3.6e-86	39.91	Transmembrane amino acid transporter family protein	[more]
AT5G40780.1	2.3e-32	26.41	lysine histidine transporter 1	[more]
AT1G67640.1	6.7e-32	24.83	Transmembrane amino acid transporter family protein	[more]
AT1G24400.1	3.3e-31	23.93	lysine histidine transporter 2	[more]

BLAST of Carg22240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8L4X4\|GAT2_ARATH	4.0e-159	67.66	Probable GABA transporter 2 OS=Arabidopsis thaliana OX=3702 GN=At5g41800 PE=1 SV...	[more]
sp\|F4HW02\|GAT1_ARATH	6.6e-85	39.91	GABA transporter 1 OS=Arabidopsis thaliana OX=3702 GN=GAT1 PE=1 SV=1	[more]
sp\|Q9FKS8\|LHT1_ARATH	4.2e-31	26.41	Lysine histidine transporter 1 OS=Arabidopsis thaliana OX=3702 GN=LHT1 PE=1 SV=1	[more]
sp\|Q9SR44\|LHTL2_ARATH	1.2e-30	24.83	Lysine histidine transporter-like 2 OS=Arabidopsis thaliana OX=3702 GN=At1g67640...	[more]
sp\|Q9LRB5\|LHT2_ARATH	6.0e-30	23.93	Lysine histidine transporter 2 OS=Arabidopsis thaliana OX=3702 GN=LHT2 PE=1 SV=1	[more]

BLAST of Carg22240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KYC5\|A0A0A0KYC5_CUCSA	2.3e-188	78.71	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G051440 PE=4 SV=1	[more]
tr\|A0A1S3BTV4\|A0A1S3BTV4_CUCME	3.4e-187	78.40	probable GABA transporter 2 OS=Cucumis melo OX=3656 GN=LOC103493108 PE=4 SV=1	[more]
tr\|B9RCQ1\|B9RCQ1_RICCO	2.9e-170	71.95	Amino acid transporter, putative OS=Ricinus communis OX=3988 GN=RCOM_1691270 PE=...	[more]
tr\|A0A2P5B679\|A0A2P5B679_PARAD	2.9e-170	70.88	Amino acid transporter, transmembrane domain containing protein OS=Parasponia an...	[more]
tr\|A0A2C9WHU3\|A0A2C9WHU3_MANES	4.9e-170	70.50	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G045500 PE=4 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR013057	AA_transpt_TM

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22240-RA	Carg22240-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013057	Amino acid transporter, transmembrane domain	PFAM	PF01490	Aa_trans	coord: 24..197 e-value: 1.8E-31 score: 109.2 coord: 208..377 e-value: 5.5E-20 score: 71.4
None	No IPR available	PANTHER	PTHR22950:SF229	GABA TRANSPORTER 2-RELATED	coord: 9..206
None	No IPR available	PANTHER	PTHR22950	AMINO ACID TRANSPORTER	coord: 9..206 coord: 207..389
None	No IPR available	PANTHER	PTHR22950:SF229	GABA TRANSPORTER 2-RELATED	coord: 207..389

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22240	Cla010921	Watermelon (97103) v1	carwmB0589
Carg22240	Cla011382	Watermelon (97103) v1	carwmB0590
Carg22240	Csa4G051440	Cucumber (Chinese Long) v2	carcuB0617
Carg22240	Csa5G150970	Cucumber (Chinese Long) v2	carcuB0618
Carg22240	MELO3C016305	Melon (DHL92) v3.5.1	carmeB0596
Carg22240	MELO3C005740	Melon (DHL92) v3.5.1	carmeB0594
Carg22240	ClCG01G002000	Watermelon (Charleston Gray)	carwcgB0575
Carg22240	ClCG07G014920	Watermelon (Charleston Gray)	carwcgB0576
Carg22240	CSPI05G04740	Wild cucumber (PI 183967)	carcpiB0624
Carg22240	CSPI04G06250	Wild cucumber (PI 183967)	carcpiB0623
Carg22240	Cucsa.107280	Cucumber (Gy14) v1	carcgyB0663
Carg22240	CmaCh15G012710	Cucurbita maxima (Rimu)	carcmaB0824
Carg22240	CmoCh15G013410	Cucurbita moschata (Rifu)	carcmoB0802
Carg22240	CmoCh04G007450	Cucurbita moschata (Rifu)	carcmoB0804
Carg22240	Lsi09G001850	Bottle gourd (USVL1VR-Ls)	carlsiB534
Carg22240	Lsi07G007070	Bottle gourd (USVL1VR-Ls)	carlsiB536
Carg22240	Cp4.1LG13g01180	Cucurbita pepo (Zucchini)	carcpeB0837
Carg22240	Cp4.1LG14g02500	Cucurbita pepo (Zucchini)	carcpeB0838
Carg22240	Cp4.1LG01g00290	Cucurbita pepo (Zucchini)	carcpeB0839
Carg22240	CsGy5G002020	Cucumber (Gy14) v2	carcgybB0590
Carg22240	MELO3C016305.2	Melon (DHL92) v3.6.1	carmedB0603
Carg22240	MELO3C005741.2	Melon (DHL92) v3.6.1	carmedB0601
Carg22240	CsaV3_5G002130	Cucumber (Chinese Long) v3	carcucB0625
Carg22240	CsaV3_4G006450	Cucumber (Chinese Long) v3	carcucB0624
Carg22240	Cla97C01G002060	Watermelon (97103) v2	carwmbB0616
Carg22240	Cla97C07G141860	Watermelon (97103) v2	carwmbB0617
Carg22240	Bhi12G000143	Wax gourd	carwgoB0700
Carg22240	Bhi01G002284	Wax gourd	carwgoB0701

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22240	Carg13058	Silver-seed gourd	carcarB049
Carg22240	Carg21270	Silver-seed gourd	carcarB384

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22240	Cucumber (Gy14) v2	carcgybB0589
Carg22240	Cucurbita maxima (Rimu)	carcmaB0825
Carg22240	Cucurbita maxima (Rimu)	carcmaB0826
Carg22240	Cucurbita moschata (Rifu)	carcmoB0803