Carg22202 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22202
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DUF2365 domain-containing protein
Location	Cucurbita_argyrosperma_scaffold_174 : 38713 .. 43090 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATAATTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCTCATAGTTTTTGCATCCTTCTTCTTTTACGCCCCATTTTCATTTTGCTTTAATATGTTGAAGATCGGATGAATGAGTTTTGAGTTTTGAGTTTGAGTACTTCACCAGATTTGATTATTACTGGACGAACCTGATTTTATCCCCTTTAATAATGACTGGAATTTACCACTCTAGCATGAATTTCTGGAGCAATGATTCTGGGTTTCCTCTTGTCAAGCAGTTTATCTGAGTAGAAATAGTATAATCATGTAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGGTAAGTCAACATAGTAATGATTTTGATTCACAGGAATGGCCGAGTATGATGGCAGTTTAGATGTGTCATTGTCTACTACTGTTACTACTAAACTGATTACATTCATGGGTACTTCTTCCTGTATGAATCAAAATTCTATCTGTTTATCTTTATGTCCTGTGAGATCCCACATTGGTCGGAGAGGGGAACGAAACATTCCTTATAAGGATGTGGAAACCTCTTCCTAGCAGACGTGTTTTAAAACCATGAGGTTGACGGCGATGTGTAACAGGCCAAAGCGGACAATGTCGGCTAATAGTGGACTTGGGCTATTACATGTCCATTATTCTGTTCTAGAATCTGTGTTATGTGATCGGCCTTTGTGCCAGTTTTTGTACTAAATTTGGAAAGAGATTAGTTGCAATCAGTTCTCTCCCATACTACTAACAAAGACCTTGTTTTTCATCTGATGGTCTTTGACATGAGTTCTCTTCTGTTCTTTCAACCTTGTAGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGGTATGCTTCAATGTCTTCTGGTATCTCCTTTGCTCTATAGGTTTCAATTTCTTTGCTGTCAGTATTTTCTATGACTAATAACTTAAATATTTTACTCATTTGTCAAAATGTGATTGCTCTGTGAATGTTGTAGCTTTTTACAACCTGCTGCATAAAATGATACATGGAAATTCTTGAACCAAGTTCTAGTAGGAGATTAGATTGAAACACGCACATAAAAAAAAGTTTCTTTATTGTTAAAAGATTCTATCCCAAGGGTCCAAAATTAGAGTTTAATCTAAAAGAGGTTGTTTGTAACGGCTCAAGCCCACCGCTAGCAGATATTGTCTCTTTGGGCTTTCCCTTAAGGTTTTTAAAACACGTCTGCTAGGGAAAGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAATTGATGTGGGATCTCACAATCTACCCCTTTGGGACCCAGCGTCCTCACTAACACTCGTTCCCCTCTCCAATCGATGTGGGACCTCCAATCCACCCCCCTTCGGCACCCAATGTCCTTGTTAGCACACTGCCTCGTGTTCACTCCCTTCGGTGTTCAGCCTCCTCGCTAGCACATCGTCTGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAAGCCCACCGCTAGTAGATATTGTCCTCTTTAGGCTTTCCCTTTCGAGTTTCCCCTCAGTTTTTAAAACGCGTTTGCTAGGGAAGTTTCAACACCCTTATAAAGAGTGCTTTTGTTGAACCTGTTATGCATCTTTACCCAATCGTAGTAGACTGTTACTTTAGAAAAGGATGTTAGGTATGTATCATTAATTATAGGATTCTTCTTCATCGGTTACTTCCAGAAATTATATAGTTCTTTTAATTATGAAATGTTGATAATTAGAAATACAACTTTTCTGTTGTCTCAATTGTATCAGAAATGTTGCTCGAACATATGATGCTAGGTGTCACGGTCATGCTTGTCCAAGGCGTGTTGCCCATGGCTGCATGCCCATGACAAGCCAAACCCTTTATGTCTTTCCATGTTATAGTGTTTTACTTTTGTATATCTAGGAAGTATGACGTTTTAGAAAAATCATGTCTAGGCTTGTCAGACATGAAATGCCTCAAAATGTACTATAGGAGGATATGACTAGTTGTCAACTTCTCCCTACCAATAATTATATACTGTGAGCCGTTGTTGTTACTCTTTTGCTTGCATATATAACACATCTTTCAAAACCTCTTCTTCGAAAATCTCTCTCTGCCCTCATTTTCTAAAACCTTCTTCTTAAACCGAGGCCAAAGGCTCGAGCATATGTCGCTTAGCGTAAGTGACGTAAAAACAAATTGGCTTAGCTCACTCGTGGTTGGGAAATGAGTGCCACACAATCGCAAGTCCGCTGCCATCAAAAGTACGATTGTGACACCAGGCACCCAAATAATTGTGGATATAACTGTTACTTGGTAGTGTTCTGCAAAAATTATTAAGAAATGAAAGAACAGCATAAAAGTTTTGAGAGATATTTATTAATGTAATGATAAAAACTACAACTTAGGCGCTTCGAGAAACTATTTGGTGTATCTCTGTGATAATGAGGAGTAAGTCCTCTTGATGAGTCCTCTGTTAGTTTGATTGTGTTCATAGTTTTTTTAGTGTGAAATTATATAGTTCTTCAATAGATGTTGGATGGCTGTCCCTGACTACAAATCTGCATAGCTATCACATAGAACTCTCTTTAATGTGATCCGAAGGGAACATAAGATTTAGAAAAGTTTAGTATATTGGCAGAGTTGTGTTTGTACTATCAATGATTGATCACAAGTTAGTAGAAATCAAATCAATGTGTCTTTTTACTTGTATTAATTATGACTCCGACTATGTTGTTTCACAAGTGAAGTTAGTCAATGTGAGATCCCACATCGGTTGGGGAGGAGAACGAAACATCCCTTATAAGGGTGTGGAAACCTTTCCATAACAGACGCTTTTTAAAAACCTTGAGGGGAAACCTAAAAGGAAAAGGCCAAAGAGGACAGTATCTGTAACGACCCAGATCCACCGCTAGCAGATATTGTCCTCTCTAGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCATCTGCTAGGGGCACTAGGGGAAGGTTTCCACACCCTTATAAAAGGGTGTTTTGGTCTACTAGCGGTGGATCTGGGTCGTTACGAATGGTATCAGAGCCAGACACCGGACGATGTGCCAACCTTCTCGCTGTTCCCTGAAGGAGGGTAGACACGAGGCGATGTGCTAGTAAGGACGCTTGGCCCCAAAGGGGGGTGGATTTGGGGGCGGTCCCACGTCGATTGGAGGAAGGAAAGAGTGCCAGCGAGGACGTTGGGCCTCGAAGAGGGGTGGATTGTGATGTCCCACATTGGTTGGGGAGGAGAACAAACCACCATTTATAAGGGTGTGGAAACCTTTCCCTAGCAGACGCGTTTTAAAGCCTTGAGGGGAAGCCCGAAAGGGAAAGCCCAAAGAGGACAATATTTGCTAGTGGTGGATCTGGGTTACAATATCTACTTGTGGTGGGCTAAGGCTATTATAAATAGTATAAGAGCTAGACATCTGGCGATGTGCCCATGAGGAGGTTGAGCCCTAAAGAGGGGTGGATATGAAGCGGTGTGCCAGCAAGGATGCTGGGTCTCGAAAAAGGGTGGATTAGGGGGTCCCACATTGATTGGAGAAGGGAACGAGTGCCAGCGAGGACGCTGAGTCCCGAAGGGGTGGTGGGTTGTGAGATCCCACATCGGTTGTGGAGGAGAACGAAACATTCTTTATAAGGGTATGGAAACCTCTCTCTAACAGACGCGTTTTTGGGAAAAACCTAAAGAGAACAGTATCTGTTAGTTGTGAGCTTGAACGGTCAACTAATGAGATTAGTCTAGTTCATCTCTCTAATTCAAAATCATTAAGTTCTCTTTTAAATTTCAATTCCATTCGCCCTTAATTTCCATTATACACATCTTTATACTCTCTGATAATGATTAGTGAATCACAATTTCACATCTTAGAGATAATCATATGGCCGATGCTGTAACTTTGGACTATGTTTTGTTGTGTTGTGTTTTCAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATGCCTAGTAGACCATTTTAA

mRNA sequence

AAGGAGACAAATGGAATACTTTATGATCGATTTTCATTATAATTCACTAATTTCCTAAACGAGGCGTAGGTCGGAAAACATCGAGAAATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATGCCTAGTAGACCATTTTAA

Coding sequence (CDS)

ATGGAGCAATCCCCATCGGATTCTTCGTCGAGCATCGAAGCCGGACGTCAGATTCCGGCGACATCTCCAAATTCGGCCATTCCCGAGACGCCCACTTGTTCTGTTCTTGAGGACTGCACCAGACCCAGATCTTCGTTGAGCCATACCGAGATTTTCAAAGCCATTGATGTCGTCGAGAAGGACTCTCTCGCCATTGCCGAGAGCTTTACCTCTCTCTTCGCTTCCCTGCGTTCGACTCTCTCCGAGGTCACCAGCAACTCTATTGATCATATGCATTGCTTCAACGATGCTGCAGGCCGCCTTCAAGAATCTGTGCTTGATGCGGCAACAAAGGGTAATCGATACATAAATTCTTCCTTGAGATTGAATCAGGAAATGAAAGGCATGGACAATCTAGCTGCTCAGCTGTATCCTTTCTATTTCATGCCTAGTAGACCATTTTAA

Protein sequence

MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQLYPFYFMPSRPF

Homology

[Close]

BLAST of Carg22202 vs. NCBI nr
Match: XP_022931514.1 (uncharacterized protein LOC111437668 [Cucurbita moschata])

HSP 1 Score: 258.5 bits (659), Expect = 1.4e-65
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK
Sbjct: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQL 137
           RLNQEMKGMDNLAAQL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]

BLAST of Carg22202 vs. NCBI nr
Match: XP_023553161.1 (uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 255.4 bits (651), Expect = 1.2e-64
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           MEQSPSDSS+SIE GRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK
Sbjct: 1   MEQSPSDSSTSIEPGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQL 137
           RLNQEMKGMDNLAAQL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]

BLAST of Carg22202 vs. NCBI nr
Match: XP_022984532.1 (uncharacterized protein LOC111482798 [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 2.7e-64
Identity = 134/136 (98.53%), Postives = 135/136 (99.26%), Query Frame = 0


Query: 1   MEQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60
           MEQSPSDSSSSIEAG QIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK
Sbjct: 1   MEQSPSDSSSSIEAGSQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEK 60

Query: 61  DSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120
           +SLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL
Sbjct: 61  NSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSL 120

Query: 121 RLNQEMKGMDNLAAQL 137
           RLNQEMKGMDNLAAQL
Sbjct: 121 RLNQEMKGMDNLAAQL 136

[Close]

BLAST of Carg22202 vs. NCBI nr
Match: XP_004146523.1 (PREDICTED: uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hypothetical protein Csa_4G048000 [Cucumis sativus])

HSP 1 Score: 202.6 bits (514), Expect = 9.2e-49
Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQL 137
           LRLNQEMKGMDNLAAQL
Sbjct: 121 LRLNQEMKGMDNLAAQL 132

[Close]

BLAST of Carg22202 vs. NCBI nr
Match: XP_008452025.1 (PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo])

HSP 1 Score: 201.1 bits (510), Expect = 2.7e-48
Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQL 137
           LRLNQEMKGMDNLAAQL
Sbjct: 121 LRLNQEMKGMDNLAAQL 132

[Close]

BLAST of Carg22202 vs. TAIR10
Match: AT4G23330.1 (BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation factor 3A (TAIR:AT4G11420.1))

HSP 1 Score: 110.5 bits (275), Expect = 8.7e-25
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 0


Query: 7   DSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIA 66
           D+ + I+  R + A S     PE       E  + P SSL+  EI K +  VEKDS AIA
Sbjct: 2   DAGAEIDVVRPVEADSAAEISPEQDH----EGRSEP-SSLNQGEILKTLATVEKDSQAIA 61

Query: 67  ESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRL 123
           ESF+SLF SLRSTLSE T +S+DHM CF +AAGRLQE+ LDAATKGNRYINS LRL
Sbjct: 62  ESFSSLFVSLRSTLSEATGSSVDHMACFGEAAGRLQENALDAATKGNRYINSCLRL 112

[Close]

BLAST of Carg22202 vs. TrEMBL
Match: tr|A0A0A0KWT2|A0A0A0KWT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 6.1e-49
Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T SV+EDCT+ +SSLS  +I KAI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSVIEDCTKTQSSLSQAQILKAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLA+AESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAMAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQL 137
           LRLNQEMKGMDNLAAQL
Sbjct: 121 LRLNQEMKGMDNLAAQL 132

[Close]

BLAST of Carg22202 vs. TrEMBL
Match: tr|A0A1S3BTP0|A0A1S3BTP0_CUCME (uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=4 SV=1)

HSP 1 Score: 201.1 bits (510), Expect = 1.8e-48
Identity = 113/137 (82.48%), Postives = 121/137 (88.32%), Query Frame = 0


Query: 1   MEQSPSDSS-SSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVE 60
           MEQSP+DSS +SIE   QIPATSPNS      T S +EDCT+ +SSLS T+I +AI+VVE
Sbjct: 1   MEQSPADSSTTSIETECQIPATSPNST-----TSSDVEDCTKTQSSLSQTQILEAIEVVE 60

Query: 61  KDSLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120
           KDSLAIAESFTSLFASLRS LSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS
Sbjct: 61  KDSLAIAESFTSLFASLRSVLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSS 120

Query: 121 LRLNQEMKGMDNLAAQL 137
           LRLNQEMKGMDNLAAQL
Sbjct: 121 LRLNQEMKGMDNLAAQL 132

[Close]

BLAST of Carg22202 vs. TrEMBL
Match: tr|A0A2C9WA69|A0A2C9WA69_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G019300 PE=4 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 5.0e-35
Identity = 81/118 (68.64%), Postives = 99/118 (83.90%), Query Frame = 0


Query: 19  PATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKDSLAIAESFTSLFASLRS 78
           P  +P+S  PE+       + T  + +L+H++IFKA++VVE+DSLAIAESFTSLFASLR 
Sbjct: 25  PELNPSSTCPESTPDLDEPNLTESKPALNHSQIFKALEVVERDSLAIAESFTSLFASLRL 84

Query: 79  TLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDNLAAQL 137
            LSEVTSNS+DHM CF+DA+GRLQESVLDAATKGNRYINS LRLN+EMKG+D+LAAQL
Sbjct: 85  ALSEVTSNSVDHMDCFSDASGRLQESVLDAATKGNRYINSCLRLNEEMKGIDSLAAQL 142

[Close]

BLAST of Carg22202 vs. TrEMBL
Match: tr|V4THF4|V4THF4_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022634mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.2e-34
Identity = 80/128 (62.50%), Postives = 101/128 (78.91%), Query Frame = 0


Query: 17  QIPATSPNSAIPETPTCSVLED-----CTRPRSSLSHTEIFKAIDVVEKDSLAIAESFTS 76
           + P + P++A P++ +     D      T P+ S +  +I KA++VVE+DS+AIA+SF+S
Sbjct: 14  EFPCSDPDNA-PQSTSAEPTRDPDRLESTEPKPSFNQNDIVKALEVVERDSVAIADSFSS 73

Query: 77  LFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLRLNQEMKGMDN 136
           LFASLR  LSEVTS+S+DHM CF+DAAGRLQESVLDAATKGN YINS LRLN+EMKG+DN
Sbjct: 74  LFASLRLALSEVTSSSVDHMQCFSDAAGRLQESVLDAATKGNHYINSCLRLNEEMKGIDN 133

Query: 137 LAAQLYPF 140
           LAAQLYPF
Sbjct: 134 LAAQLYPF 140

[Close]

BLAST of Carg22202 vs. TrEMBL
Match: tr|A0A2P6P6W8|A0A2P6P6W8_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0197541 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 7.2e-34
Identity = 81/135 (60.00%), Postives = 100/135 (74.07%), Query Frame = 0


Query: 2   EQSPSDSSSSIEAGRQIPATSPNSAIPETPTCSVLEDCTRPRSSLSHTEIFKAIDVVEKD 61
           +Q+P     S E     P   P S  P++      +D +  +  L+ T++F+A++VVE+D
Sbjct: 7   DQAPLPHPPSSETPISDPNLDPPSTCPDSTVAHTQDDGSDSKPQLNQTDLFRAVEVVERD 66

Query: 62  SLAIAESFTSLFASLRSTLSEVTSNSIDHMHCFNDAAGRLQESVLDAATKGNRYINSSLR 121
           SLAIAESF SLF+SLR  LSEVTSNS+DHMHCF DAAGRLQESVLDAATKGNRYINS LR
Sbjct: 67  SLAIAESFNSLFSSLRLALSEVTSNSVDHMHCFGDAAGRLQESVLDAATKGNRYINSCLR 126

Query: 122 LNQEMKGMDNLAAQL 137
           LN+EMKG+D+LA QL
Sbjct: 127 LNEEMKGVDSLALQL 141

The following BLAST results are available for this feature:

BLAST of Carg22202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022931514.1	1.4e-65	100.00	uncharacterized protein LOC111437668 [Cucurbita moschata]	[more]
XP_023553161.1	1.2e-64	98.53	uncharacterized protein LOC111810650 [Cucurbita pepo subsp. pepo]	[more]
XP_022984532.1	2.7e-64	98.53	uncharacterized protein LOC111482798 [Cucurbita maxima]	[more]
XP_004146523.1	9.2e-49	82.48	PREDICTED: uncharacterized protein LOC101210623 [Cucumis sativus] >KGN53339.1 hy...	[more]
XP_008452025.1	2.7e-48	82.48	PREDICTED: uncharacterized protein LOC103493156 [Cucumis melo]	[more]

BLAST of Carg22202 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G23330.1	8.7e-25	57.76	BEST Arabidopsis thaliana protein match is: eukaryotic translation initiation fa...	[more]

BLAST of Carg22202 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg22202 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KWT2\|A0A0A0KWT2_CUCSA	6.1e-49	82.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G048000 PE=4 SV=1	[more]
tr\|A0A1S3BTP0\|A0A1S3BTP0_CUCME	1.8e-48	82.48	uncharacterized protein LOC103493156 OS=Cucumis melo OX=3656 GN=LOC103493156 PE=...	[more]
tr\|A0A2C9WA69\|A0A2C9WA69_MANES	5.0e-35	68.64	Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_02G019300 PE=4 SV=...	[more]
tr\|V4THF4\|V4THF4_9ROSI	7.2e-34	62.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10022634mg PE=4 ...	[more]
tr\|A0A2P6P6W8\|A0A2P6P6W8_ROSCH	7.2e-34	60.00	Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr7g0197541 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22202-RA	Carg22202-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR39708	FAMILY NOT NAMED	coord: 19..136

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22202	Cla014632	Watermelon (97103) v1	carwmB0588
Carg22202	Csa4G048000	Cucumber (Chinese Long) v2	carcuB0617
Carg22202	MELO3C016353	Melon (DHL92) v3.5.1	carmeB0596
Carg22202	ClCG07G008090	Watermelon (Charleston Gray)	carwcgB0577
Carg22202	CSPI04G05790	Wild cucumber (PI 183967)	carcpiB0623
Carg22202	Cucsa.106810	Cucumber (Gy14) v1	carcgyB0663
Carg22202	CmoCh16G006430	Cucurbita moschata (Rifu)	carcmoB0803
Carg22202	Lsi07G008880	Bottle gourd (USVL1VR-Ls)	carlsiB535
Carg22202	MELO3C016353.2	Melon (DHL92) v3.6.1	carmedB0603
Carg22202	CsaV3_4G005950	Cucumber (Chinese Long) v3	carcucB0624
Carg22202	Cla97C07G135240	Watermelon (97103) v2	carwmbB0618
Carg22202	Bhi01G001806	Wax gourd	carwgoB0702

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22202	Silver-seed gourd	carcarB535
Carg22202	Cucumber (Gy14) v2	carcgybB0589
Carg22202	Cucurbita maxima (Rimu)	carcmaB0825
Carg22202	Cucurbita maxima (Rimu)	carcmaB0826
Carg22202	Cucurbita moschata (Rifu)	carcmoB0804
Carg22202	Cucurbita pepo (Zucchini)	carcpeB0838
Carg22202	Cucurbita pepo (Zucchini)	carcpeB0839