BLAST of Carg22141 vs. NCBI nr
Match:
XP_022945787.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita moschata])
HSP 1 Score: 1741.5 bits (4509), Expect = 0.0e+00
Identity = 866/877 (98.75%), Postives = 869/877 (99.09%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEG+CVHSPIIKLGLLGNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGLCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTK+AYETFRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
LHSHLISLGVNLNVVLKTALVDMYSGYQELEYA KVANQTPEKDVFLWTSIISCFNQNSK
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYATKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
VKEAIAAF EMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA
Sbjct: 301 VKEAIAAFLEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN
Sbjct: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
Query: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHR 480
SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVD YARSGMVDDARRVIRTMKHR
Sbjct: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480
Query: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLH 540
DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE GKQLH
Sbjct: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIEAGKQLH 540
Query: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS
Sbjct: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
Query: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCV 660
AALSAFDNMRLAGLKPDSITLLSVLSACSQG LVDFGMHYFQTMRETHNIEPALDHYVCV
Sbjct: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV 660
Query: 661 IDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
IDLHGRAGQLEKAMEIVE MPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS
Sbjct: 661 IDLHGRAGQLEKAMEIVEGMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
Query: 721 SFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
SFYLLLASLYDELDRPDLSTKTRKLM+DRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN
Sbjct: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
Query: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICREC 840
DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLV MPPKGVVRIMKNISICREC
Sbjct: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC 840
Query: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHYP 878
HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCK YP
Sbjct: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKRYP 877
BLAST of Carg22141 vs. NCBI nr
Match:
XP_023542503.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1726.8 bits (4471), Expect = 0.0e+00
Identity = 858/877 (97.83%), Postives = 868/877 (98.97%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLYAKRFG+KQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF
Sbjct: 61 SLYAKRFGIKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLSTLIRSCSETRELKLG CVHGYAIKGGFESKPVLGCTLIDLYAKCDCT++AYETFRNM
Sbjct: 121 TLSTLIRSCSETRELKLGGCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTEEAYETFRNM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
LHSHLISLGVNLNVVLKTALVDMYSGYQELEYA+KVANQTPEKDVFLWTSIISCF+QNSK
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFSQNSK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN
Sbjct: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
Query: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHR 480
SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVD YARS MVDDARRVIRTMKHR
Sbjct: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDAYARSKMVDDARRVIRTMKHR 480
Query: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLH 540
DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLH
Sbjct: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLH 540
Query: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVS NGLISILALNGHIS
Sbjct: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSCNGLISILALNGHIS 600
Query: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCV 660
AALSAFDNMRLAGLKPDSITLLSVLSACSQG LVDFGMHYFQTMRETHNIEPALDHYVCV
Sbjct: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVCV 660
Query: 661 IDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
IDLHGRAGQLEKAMEIVE+MPFEADAK+Y+TLLSACKLHRNVLLGEDVARRGLQLDPYDS
Sbjct: 661 IDLHGRAGQLEKAMEIVESMPFEADAKIYRTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
Query: 721 SFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
SFYLLLASLYDELDRPDLSTKTRKLM+DRGMRKSPSQSWVELSGKIHVFITGDRSHPE+N
Sbjct: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEIN 780
Query: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICREC 840
DMEEKLEFLRAEFKSRGFLY DDEDSCHHSEKLALAFGLV MPPKGVVRIMKNISICREC
Sbjct: 781 DMEEKLEFLRAEFKSRGFLYHDDEDSCHHSEKLALAFGLVSMPPKGVVRIMKNISICREC 840
Query: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHYP 878
HDFILLATKVVEREIVVRDGSRLHV NGSCSCKHYP
Sbjct: 841 HDFILLATKVVEREIVVRDGSRLHVLKNGSCSCKHYP 877
BLAST of Carg22141 vs. NCBI nr
Match:
XP_022968638.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita maxima])
HSP 1 Score: 1711.8 bits (4432), Expect = 0.0e+00
Identity = 850/876 (97.03%), Postives = 863/876 (98.52%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL
Sbjct: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF
Sbjct: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTK+AYETFRNM
Sbjct: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKEAYETFRNM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
DDADTVTWTTMISSLVQAQKWAEA QLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL
Sbjct: 181 DDADTVTWTTMISSLVQAQKWAEAPQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
LHSHLISLGVNLNVVLKTALVDMYSGYQELEYA+KVANQTPEKDVFLWTSIISCFNQNSK
Sbjct: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAMKVANQTPEKDVFLWTSIISCFNQNSK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQ+ILAGLEADVCAGSA
Sbjct: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQIILAGLEADVCAGSA 360
Query: 361 LINMYMKSDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
LINMYMKSDLI+DALRVF SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN
Sbjct: 361 LINMYMKSDLIEDALRVFRSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPN 420
Query: 421 SFTLSSILGACKNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHR 480
SFTLSSILGACKNQISMFHGY+LKSMAY DIVVGNALVD YARSGMVDDARRVIRTMKHR
Sbjct: 421 SFTLSSILGACKNQISMFHGYVLKSMAYQDIVVGNALVDAYARSGMVDDARRVIRTMKHR 480
Query: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLH 540
DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATG+GTIETGKQLH
Sbjct: 481 DPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGLGTIETGKQLH 540
Query: 541 CYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
C+SLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS
Sbjct: 541 CFSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHIS 600
Query: 601 AALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCV 660
AALSAFDNMRLAGL PDSITLLSVLSACSQG LVDFGMHYFQTMRETHNIEPALDHYV V
Sbjct: 601 AALSAFDNMRLAGLNPDSITLLSVLSACSQGGLVDFGMHYFQTMRETHNIEPALDHYVRV 660
Query: 661 IDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDS 720
IDLHGRAGQLEKAMEIVE+MPFEADAK+YKTLLSACKLHRNVLLGEDVARRGL LDPYDS
Sbjct: 661 IDLHGRAGQLEKAMEIVESMPFEADAKIYKTLLSACKLHRNVLLGEDVARRGLHLDPYDS 720
Query: 721 SFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
SFYLLLASLYDELDRPDLSTKTRKLM+DRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN
Sbjct: 721 SFYLLLASLYDELDRPDLSTKTRKLMRDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMN 780
Query: 781 DMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICREC 840
DMEEKLEFLRAEFKSRGFLY DDEDSCHHSEKLALAFGLV MPP+ V+RIMKNISICREC
Sbjct: 781 DMEEKLEFLRAEFKSRGFLYRDDEDSCHHSEKLALAFGLVSMPPEAVIRIMKNISICREC 840
Query: 841 HDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
HDFI+LATKVVEREIVVRD SRLHVF NGSCSCKHY
Sbjct: 841 HDFIVLATKVVEREIVVRDRSRLHVFKNGSCSCKHY 876
BLAST of Carg22141 vs. NCBI nr
Match:
XP_022141235.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Momordica charantia])
HSP 1 Score: 1490.3 bits (3857), Expect = 0.0e+00
Identity = 731/882 (82.88%), Postives = 807/882 (91.50%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
M+CRTVPKF+N NEL RLEE CS LISICNSKSLKEG+CVHSPIIKLGL GNLYLSNNLL
Sbjct: 1 MICRTVPKFLNRNELNRLEETCSHLISICNSKSLKEGICVHSPIIKLGLYGNLYLSNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
+LYAKRFGLKQARNLFDEMPD+DVVSWTTMQAAYVR+ +Y +AFELFDLM LG+ PNEF
Sbjct: 61 TLYAKRFGLKQARNLFDEMPDKDVVSWTTMQAAYVRNRSYIEAFELFDLMVILGHCPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLSTL+RSCSET EL+LG+CVHGYAIKGGFESKPVLGCTLID+YAKCDCT++A E FRNM
Sbjct: 121 TLSTLLRSCSETGELELGACVHGYAIKGGFESKPVLGCTLIDMYAKCDCTEEACEVFRNM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
D+ADTVTWT ISSLVQAQKW EALQLYITM+ESGV PNEFTFTKLLAT +F+ LKYGKL
Sbjct: 181 DNADTVTWTATISSLVQAQKWNEALQLYITMIESGVTPNEFTFTKLLATINFLDLKYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
LH+H+I+ GV+LNV+LKT LVDMYS YQELE A+KVANQT EKDV LWTSIISCFNQN K
Sbjct: 241 LHNHVITFGVDLNVLLKTTLVDMYSRYQELEDAMKVANQTAEKDVHLWTSIISCFNQNLK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
VKEAIA QEMR+SGIPP+SFTYSS LSACTL+PSLELGKQIHLQVILAGLEADVCAGSA
Sbjct: 301 VKEAIATLQEMRISGIPPNSFTYSSVLSACTLIPSLELGKQIHLQVILAGLEADVCAGSA 360
Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
LINMYMK SD I+DALRVF +I +P+VICWTSLISGLAEHG EQDCYRYFLDMQAAGVQP
Sbjct: 361 LINMYMKCSDSINDALRVFRTITSPNVICWTSLISGLAEHGCEQDCYRYFLDMQAAGVQP 420
Query: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
NSFTLSSILGAC +N+ SMFHGYILK A+HDI+VGNALVD YARS MVD+A RVI
Sbjct: 421 NSFTLSSILGACSSAKSQNRTSMFHGYILKIRAHHDIIVGNALVDAYARSRMVDEAWRVI 480
Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
TM HRD ITYTSLATRLNQMGDHEMALKTI SMR DNV+ DE+SLASL+SAATG+GT++
Sbjct: 481 STMNHRDAITYTSLATRLNQMGDHEMALKTISSMRDDNVRKDEVSLASLISAATGLGTVK 540
Query: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
G+QLHCYSL+YGL NTRSVKNSL+D YGKVGCLKDA KAFEEITEPDVVSWNG+IS+LA
Sbjct: 541 IGEQLHCYSLKYGLYNTRSVKNSLIDLYGKVGCLKDAQKAFEEITEPDVVSWNGMISVLA 600
Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
LNGH+S+ALSAFDNMRLAGLKPDSIT L +LSACSQG LVDFGMHYFQ+MRE H +EP L
Sbjct: 601 LNGHVSSALSAFDNMRLAGLKPDSITFLLILSACSQGGLVDFGMHYFQSMREIHYVEPEL 660
Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
DHYVC++DL GRAGQLEKAME+VE+MPFEADAK+YKTLLSACKLH+N+LLGEDVARRGLQ
Sbjct: 661 DHYVCLVDLLGRAGQLEKAMEVVESMPFEADAKIYKTLLSACKLHKNMLLGEDVARRGLQ 720
Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
LDPYDSSFYLLLA+LYDEL+RPDLS +TRKLM+DRG+RKSPSQSW ELS IH+FITGDR
Sbjct: 721 LDPYDSSFYLLLANLYDELNRPDLSKETRKLMRDRGVRKSPSQSWTELSNSIHLFITGDR 780
Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNI 840
SHP++ND++EKLEFL+AEFK RGFLY DE+S HHSEKLALAFGL+ +PPK V+RIMKNI
Sbjct: 781 SHPQINDIQEKLEFLKAEFKVRGFLYHGDENSSHHSEKLALAFGLINLPPKAVIRIMKNI 840
Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
SICRECHDFILL TKV EREIVVRDGSRLHVF NGSCSC+HY
Sbjct: 841 SICRECHDFILLVTKVAEREIVVRDGSRLHVFKNGSCSCRHY 882
BLAST of Carg22141 vs. NCBI nr
Match:
XP_023875935.1 (pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like [Quercus suber] >XP_023882138.1 pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like [Quercus suber])
HSP 1 Score: 1071.6 bits (2770), Expect = 1.3e-309
Identity = 527/882 (59.75%), Postives = 673/882 (76.30%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLC+TV K + NELY ++ C +++S+CNSKSLKEGVCVHSPIIK+GL ++YL+NNLL
Sbjct: 1 MLCKTVTKTCHRNELYHFQDICLRVVSLCNSKSLKEGVCVHSPIIKMGLQDDMYLNNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLYAK FG+ A + FDEMP +DVVSWT + ++YVR+ N+ A LFD M PNEF
Sbjct: 61 SLYAKCFGVDHAHHFFDEMPCKDVVSWTGILSSYVRNENHEQALRLFDSMLNSSQYPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLS+++RSCS E G+ + Y IK GF+S P+L LIDLY+KC+CT++AY+ F M
Sbjct: 121 TLSSVLRSCSALGEFDYGTLIQAYMIKNGFDSNPILASVLIDLYSKCNCTEEAYKVFECM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
D DTV+WTTMISSLVQAQKW++ALQ YI M+E V PNEFTF KLLA + +G YGKL
Sbjct: 181 DGGDTVSWTTMISSLVQAQKWSQALQFYIQMIEKKVPPNEFTFVKLLAASGSLGSSYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
+H+H+I LG+ LNV+LKT+LVDMYS +E A+KV+NQTPE+DVFLWT+IIS F QN K
Sbjct: 241 VHAHMILLGIELNVILKTSLVDMYSKCHRMEDAVKVSNQTPERDVFLWTAIISGFIQNMK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
VKEAIAA EM MSGI P++F+YS+ L+A + + SLELG+Q+H +VI AGLE D+ G+A
Sbjct: 301 VKEAIAALSEMVMSGIVPNNFSYSTILNASSSILSLELGEQVHSRVIKAGLEDDISVGNA 360
Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
LI+MYMK S+LID+ALRVF +++P+VI WTSLI+G A+HGFE+D +R F +M+A G+ P
Sbjct: 361 LIDMYMKCSNLIDNALRVFRGMSSPNVITWTSLIAGFAKHGFEEDSFRSFEEMRALGLAP 420
Query: 421 NSFTLSSILGACK-----NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
NSFTLSSILGAC +Q HGYI+K A DIVVGNALVD YA GMVD+AR V+
Sbjct: 421 NSFTLSSILGACSTMKSHSQTMKLHGYIIKIKADCDIVVGNALVDAYAGLGMVDEARCVV 480
Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
R M HRD ITYTSLATR+NQMG H+ AL+ I M D+VKMD S++S +SAA G+G+++
Sbjct: 481 RKMDHRDAITYTSLATRINQMGYHDRALEIIKYMNKDDVKMDGFSMSSFLSAAAGLGSMK 540
Query: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
G QLHC+S++ GL SV N LVD YGK GC+ DA +AF EITEPDV SWNG IS LA
Sbjct: 541 AGMQLHCFSVKSGLRCWLSVSNGLVDLYGKCGCIHDAHRAFGEITEPDVASWNGWISGLA 600
Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
NG+IS+ALSAF++MRL G+KPD +T L VL ACS G LVD G+ YF +MRETH I P L
Sbjct: 601 SNGYISSALSAFEDMRLVGVKPDLVTFLLVLFACSHGGLVDLGLDYFHSMRETHGIAPQL 660
Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
DHYVC+IDL GRAGQLE+AM +++ MPF DA +YKTLLSA KLH NV LGED+AR+G+
Sbjct: 661 DHYVCLIDLLGRAGQLEEAMGVIKTMPFRPDALIYKTLLSASKLHGNVPLGEDMARQGID 720
Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
LDP D +FY+LLA+LYD R DLS K R LM++RG+ K+P QSW+E+ +IH F DR
Sbjct: 721 LDPSDPAFYILLANLYDRSGRSDLSEKARGLMKERGLMKNPCQSWMEIRNQIHHFTAEDR 780
Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNI 840
SHP++N + EK+E L EFK RG+LY D+ D +HSEKLA+AFGL+ P K + I+KN
Sbjct: 781 SHPQINQIHEKIESLMTEFKYRGYLYRDNRDKSYHSEKLAVAFGLLSTPSKAPILIIKNT 840
Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
IC +CH F++L T++V+REI++R+G+R+H F G+CSC+ Y
Sbjct: 841 RICMDCHYFVMLVTELVDREIILREGNRVHSFRKGNCSCRGY 882
BLAST of Carg22141 vs. TAIR10
Match:
AT5G52850.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 859.0 bits (2218), Expect = 2.6e-249
Identity = 421/869 (48.45%), Postives = 594/869 (68.35%), Query Frame = 0
Query: 13 NELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQA 72
NEL L++ C +++S C S S + G+ +H P+IK GLL NL L NNLLSLY K G+ A
Sbjct: 18 NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77
Query: 73 RNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSET 132
R LFDEM R V +WT M +A+ + + A LF+ M G PNEFT S+++RSC+
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 133 RELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMI 192
R++ G VHG IK GFE V+G +L DLY+KC K+A E F ++ +ADT++WT MI
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 193 SSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLGVNL 252
SSLV A+KW EALQ Y M+++GV PNEFTF KLL +SF+GL++GK +HS++I G+ L
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 253 NVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMR 312
NVVLKT+LVD YS + ++E A++V N + E+DVFLWTS++S F +N + KEA+ F EMR
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 313 MSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLID 372
G+ P++FTYS+ LS C+ + SL+ GKQIH Q I G E G+AL++MYMK +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 373 -DALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC 432
+A RVFG++ +P+V+ WT+LI GL +HGF QDC+ ++M V+PN TLS +L AC
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 433 K-----NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYT 492
++ H Y+L+ ++VVGN+LVD YA S VD A VIR+MK RD ITYT
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 493 SLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRY 552
SL TR N++G HEMAL I+ M D ++MD++SL +SA+ +G +ETGK LHCYS++
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS 557
Query: 553 GLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAF 612
G SV NSLVD Y K G L+DA K FEEI PDVVSWNGL+S LA NG IS+ALSAF
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617
Query: 613 DNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGR 672
+ MR+ +PDS+T L +LSACS GRL D G+ YFQ M++ +NIEP ++HYV ++ + GR
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677
Query: 673 AGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLL 732
AG+LE+A +VE M + +A ++KTLL AC+ N+ LGED+A +GL L P D + Y+LL
Sbjct: 678 AGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILL 737
Query: 733 ASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSH-PEMNDMEEK 792
A LYDE +P+L+ KTR LM ++ + K +S VE+ GK+H F++ D + + N + +
Sbjct: 738 ADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAE 797
Query: 793 LEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICRECHDFIL 852
+E ++ E K G Y +E++ HS K A+ +G + P+ V ++KN +C++CH+F+
Sbjct: 798 IESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVS 857
Query: 853 LATKVVEREIVVRDGSRLHVFNNGSCSCK 875
+ T++V+++I VRDG+++H+F NG CSCK
Sbjct: 858 ILTRLVDKKITVRDGNQVHIFKNGECSCK 886
BLAST of Carg22141 vs. TAIR10
Match:
AT4G13650.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 500.4 bits (1287), Expect = 2.3e-141
Identity = 279/874 (31.92%), Postives = 467/874 (53.43%), Query Frame = 0
Query: 23 SQLISICNSKSLKEGVC--VHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMP 82
S ++ C S+ V +H+ I+ GL + + N L+ LY++ + AR +FD +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 83 DRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSC 142
+D SW M + ++ +A LF M LG P + S+++ +C + L++G
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 143 VHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQK 202
+HG +K GF S + L+ LY A F NM D VT+ T+I+ L Q
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 203 WAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKY-GKLLHSHLISLGVNLNVVLKTA 262
+A++L+ M G+ P+ T L+ S G + G+ LH++ LG N ++ A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 263 LVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSGIPPH 322
L+++Y+ ++E A+ +T ++V LW ++ + ++ + F++M++ I P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 323 SFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFG 382
+TY S L C L LELG+QIH Q+I + + S LI+MY K +D A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 383 SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISMFH 442
A V+ WT++I+G ++ F+ F M G++ + L++ + AC ++
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 443 GYILKSMA-----YHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 502
G + + A D+ NALV Y+R G ++++ + D I + +L + Q
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 503 MGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLDNTRSV 562
G++E AL+ M + + + + S V AA+ ++ GKQ+H + G D+ V
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 563 KNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGL 622
N+L+ Y K G + DA K F E++ + VSWN +I+ + +G S AL +FD M + +
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 623 KPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAM 682
+P+ +TL+ VLSACS LVD G+ YF++M + + P +HYVCV+D+ RAG L +A
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 683 EIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELD 742
E ++ MP + DA V++TLLSAC +H+N+ +GE A L+L+P DS+ Y+LL++LY
Sbjct: 850 EFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSK 909
Query: 743 RPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFK 802
+ D TR+ M+++G++K P QSW+E+ IH F GD++HP +++ E + L
Sbjct: 910 KWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRAS 969
Query: 803 SRGF----------LYGDDEDSC--HHSEKLALAFGLVRMPPKGVVRIMKNISICRECHD 862
G+ L + +D HSEKLA++FGL+ +P + +MKN+ +C +CH
Sbjct: 970 EIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHA 1029
Query: 863 FILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
+I +KV REI+VRD R H F G+CSCK Y
Sbjct: 1030 WIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
BLAST of Carg22141 vs. TAIR10
Match:
AT3G57430.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 473.4 bits (1217), Expect = 3.0e-133
Identity = 256/826 (30.99%), Postives = 453/826 (54.84%), Query Frame = 0
Query: 87 WTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAI 146
W + + VR +A + M LG P+ + L+++ ++ ++++LG +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
K G+ V + TL++LY KC Y+ F + + + V+W ++ISSL +KW AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 207 QLYITMLESGVAPNEFTFTKLLATTSFM----GLKYGKLLHSHLISLGVNLNVVLKTALV 266
+ + ML+ V P+ FT ++ S + GL GK +H++ + G LN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244
Query: 267 DMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSGIPPHSF 326
MY +L + + +D+ W +++S QN ++ EA+ +EM + G+ P F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304
Query: 327 TYSSALSACTLLPSLELGKQIHLQVILAG-LEADVCAGSALINMYMKSDLIDDALRVFGS 386
T SS L AC+ L L GK++H + G L+ + GSAL++MY + RVF
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 364
Query: 387 IATPSVICWTSLISGLAEHGFEQDCYRYFLDM-QAAGVQPNSFTLSSILGACK-----NQ 446
+ + W ++I+G +++ +++ F+ M ++AG+ NS T++ ++ AC ++
Sbjct: 365 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 424
Query: 447 ISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 506
HG+++K D V N L+D Y+R G +D A R+ M+ RD +T+ ++ T
Sbjct: 425 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 484
Query: 507 MGDHEMALKTIDSMR-----------ADNVKMDEISLASLVSAATGVGTIETGKQLHCYS 566
HE AL + M+ ++K + I+L +++ + + + GK++H Y+
Sbjct: 485 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 544
Query: 567 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 626
++ L +V ++LVD Y K GCL+ + K F++I + +V++WN +I ++G+ A+
Sbjct: 545 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 604
Query: 627 SAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 686
M + G+KP+ +T +SV +ACS +VD G+ F M+ + +EP+ DHY CV+DL
Sbjct: 605 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 664
Query: 687 HGRAGQLEKAMEIVEAMPFEAD-AKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSF 746
GRAG++++A +++ MP + + A + +LL A ++H N+ +GE A+ +QL+P +S
Sbjct: 665 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 724
Query: 747 YLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDM 806
Y+LLA++Y D +T+ R+ M+++G+RK P SW+E ++H F+ GD SHP+ +
Sbjct: 725 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 784
Query: 807 EEKLEFLRAEFKSRGF-------LYGDDEDS-----CHHSEKLALAFGLVRMPPKGVVRI 866
LE L + G+ L+ +ED C HSEKLA+AFG++ P ++R+
Sbjct: 785 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 844
Query: 867 MKNISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
KN+ +C +CH +K+V+REI++RD R H F NG+CSC Y
Sbjct: 845 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
BLAST of Carg22141 vs. TAIR10
Match:
AT1G16480.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 460.3 bits (1183), Expect = 2.7e-129
Identity = 270/875 (30.86%), Postives = 450/875 (51.43%), Query Frame = 0
Query: 23 SQLISIC--NSKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMP 82
+ L++ C + +EGV VH + K GLL ++Y+S +L LY + +R +F+EMP
Sbjct: 62 ASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP 121
Query: 83 DRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSC 142
DR+VVSWT++ Y G + +++ M G NE ++S +I SC ++ LG
Sbjct: 122 DRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQ 181
Query: 143 VHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQK 202
+ G +K G ESK + +LI + A F M + DT++W ++ ++ Q
Sbjct: 182 IIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGH 241
Query: 203 WAEALQLYITMLESGVAPNEFTFTKLLATTSFMG-LKYGKLLHSHLISLGVNLNVVLKTA 262
E+ +++ M N T + LL+ + K+G+ +H ++ +G + V +
Sbjct: 242 IEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNT 301
Query: 263 LVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSGIPPH 322
L+ MY+G A V Q P KD+ W S+++ F + + +A+ M SG +
Sbjct: 302 LLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVN 361
Query: 323 SFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFG 382
T++SAL+AC E G+ +H V+++GL + G+AL++MY K + ++ RV
Sbjct: 362 YVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLL 421
Query: 383 SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC------KN 442
+ V+ W +LI G AE F M+ GV N T+ S+L AC
Sbjct: 422 QMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLE 481
Query: 443 QISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLATRLN 502
+ H YI+ + D V N+L+ YA+ G + ++ + + +R+ IT+ ++
Sbjct: 482 RGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANA 541
Query: 503 QMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLDNTRS 562
G E LK + MR+ V +D+ S + +SAA + +E G+QLH +++ G ++
Sbjct: 542 HHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSF 601
Query: 563 VKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAG 622
+ N+ D Y K G + + K + SWN LIS L +G+ + F M G
Sbjct: 602 IFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMG 661
Query: 623 LKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKA 682
+KP +T +S+L+ACS G LVD G+ Y+ + +EPA++H +CVIDL GR+G+L +A
Sbjct: 662 IKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 721
Query: 683 MEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDEL 742
+ MP + + V+++LL++CK+H N+ G A +L+P D S Y+L ++++
Sbjct: 722 ETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATT 781
Query: 743 DRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEF 802
R + RK M + ++K + SWV+L K+ F GDR+HP+ ++ KLE ++
Sbjct: 782 GRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLI 841
Query: 803 KSRGFLYG--------DDEDSCH----HSEKLALAFGLVRMPPKGVVRIMKNISICRECH 862
K G++ D+E H HSE+LALA+ L+ P VRI KN+ IC +CH
Sbjct: 842 KESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCH 901
Query: 863 DFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
++V+ R IV+RD R H F G CSCK Y
Sbjct: 902 SVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDY 936
BLAST of Carg22141 vs. TAIR10
Match:
AT4G33170.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 447.2 bits (1149), Expect = 2.3e-125
Identity = 271/939 (28.86%), Postives = 452/939 (48.14%), Query Frame = 0
Query: 31 SKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMPDRDVVSWTTM 90
S L G C H+ I+ +L NNL+S+Y+K L AR +FD+MPDRD+VSW ++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 91 QAAYVRHG-----NYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYA 150
AAY + N AF LF ++ + TLS +++ C + + HGYA
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 151 IKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 210
K G + + L+++Y K K+ F M D V W M+ + ++ EA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 211 QLYITMLESGVAPNEF-------------------------------------------- 270
L SG+ PNE
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 271 -------------------------TFTKLLAT-TSFMGLKYGKLLHSHLISLGVNLNVV 330
TF +LAT L G+ +H + LG++L +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 331 LKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSG 390
+ +L++MY ++ +A V + E+D+ W S+I+ QN EA+ F ++ G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 391 IPPHSFTYSSALSACTLLP-SLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDA 450
+ P +T +S L A + LP L L KQ+H+ I +D +ALI+ Y ++ + +A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 451 LRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACK-- 510
+F ++ W ++++G + + F M G + + FTL+++ C
Sbjct: 472 EILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 531
Query: 511 ---NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLA 570
NQ H Y +KS D+ V + ++D Y + G + A+ ++ D + +T++
Sbjct: 532 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 591
Query: 571 TRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLD 630
+ + G+ E A MR V DE ++A+L A++ + +E G+Q+H +L+
Sbjct: 592 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 651
Query: 631 NTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNM 690
N V SLVD Y K G + DA F+ I ++ +WN ++ LA +G L F M
Sbjct: 652 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 711
Query: 691 RLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQ 750
+ G+KPD +T + VLSACS LV + ++M + I+P ++HY C+ D GRAG
Sbjct: 712 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGL 771
Query: 751 LEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASL 810
+++A ++E+M EA A +Y+TLL+AC++ + G+ VA + L+L+P DSS Y+LL+++
Sbjct: 772 VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 831
Query: 811 YDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFL 870
Y + D R +M+ ++K P SW+E+ KIH+F+ DRS+ + + K++ +
Sbjct: 832 YAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 891
Query: 871 RAEFKSRGFLYGDD------------EDSCHHSEKLALAFGLVRMPPKGVVRIMKNISIC 877
+ K G++ D +HSEKLA+AFGL+ PP +R++KN+ +C
Sbjct: 892 IRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVC 951
BLAST of Carg22141 vs. Swiss-Prot
Match:
sp|Q9FLX6|PP430_ARATH (Pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H31 PE=2 SV=1)
HSP 1 Score: 859.0 bits (2218), Expect = 4.6e-248
Identity = 421/869 (48.45%), Postives = 594/869 (68.35%), Query Frame = 0
Query: 13 NELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQA 72
NEL L++ C +++S C S S + G+ +H P+IK GLL NL L NNLLSLY K G+ A
Sbjct: 18 NELGNLQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNA 77
Query: 73 RNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSET 132
R LFDEM R V +WT M +A+ + + A LF+ M G PNEFT S+++RSC+
Sbjct: 78 RKLFDEMSHRTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGL 137
Query: 133 RELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMI 192
R++ G VHG IK GFE V+G +L DLY+KC K+A E F ++ +ADT++WT MI
Sbjct: 138 RDISYGGRVHGSVIKTGFEGNSVVGSSLSDLYSKCGQFKEACELFSSLQNADTISWTMMI 197
Query: 193 SSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLGVNL 252
SSLV A+KW EALQ Y M+++GV PNEFTF KLL +SF+GL++GK +HS++I G+ L
Sbjct: 198 SSLVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGLEFGKTIHSNIIVRGIPL 257
Query: 253 NVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMR 312
NVVLKT+LVD YS + ++E A++V N + E+DVFLWTS++S F +N + KEA+ F EMR
Sbjct: 258 NVVLKTSLVDFYSQFSKMEDAVRVLNSSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMR 317
Query: 313 MSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLID 372
G+ P++FTYS+ LS C+ + SL+ GKQIH Q I G E G+AL++MYMK +
Sbjct: 318 SLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCSASE 377
Query: 373 -DALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGAC 432
+A RVFG++ +P+V+ WT+LI GL +HGF QDC+ ++M V+PN TLS +L AC
Sbjct: 378 VEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRAC 437
Query: 433 K-----NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYT 492
++ H Y+L+ ++VVGN+LVD YA S VD A VIR+MK RD ITYT
Sbjct: 438 SKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYT 497
Query: 493 SLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRY 552
SL TR N++G HEMAL I+ M D ++MD++SL +SA+ +G +ETGK LHCYS++
Sbjct: 498 SLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKS 557
Query: 553 GLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAF 612
G SV NSLVD Y K G L+DA K FEEI PDVVSWNGL+S LA NG IS+ALSAF
Sbjct: 558 GFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAF 617
Query: 613 DNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGR 672
+ MR+ +PDS+T L +LSACS GRL D G+ YFQ M++ +NIEP ++HYV ++ + GR
Sbjct: 618 EEMRMKETEPDSVTFLILLSACSNGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGR 677
Query: 673 AGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLL 732
AG+LE+A +VE M + +A ++KTLL AC+ N+ LGED+A +GL L P D + Y+LL
Sbjct: 678 AGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILL 737
Query: 733 ASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSH-PEMNDMEEK 792
A LYDE +P+L+ KTR LM ++ + K +S VE+ GK+H F++ D + + N + +
Sbjct: 738 ADLYDESGKPELAQKTRNLMTEKRLSKKLGKSTVEVQGKVHSFVSEDVTRVDKTNGIYAE 797
Query: 793 LEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICRECHDFIL 852
+E ++ E K G Y +E++ HS K A+ +G + P+ V ++KN +C++CH+F+
Sbjct: 798 IESIKEEIKRFGSPYRGNENASFHSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVS 857
Query: 853 LATKVVEREIVVRDGSRLHVFNNGSCSCK 875
+ T++V+++I VRDG+++H+F NG CSCK
Sbjct: 858 ILTRLVDKKITVRDGNQVHIFKNGECSCK 886
BLAST of Carg22141 vs. Swiss-Prot
Match:
sp|Q9SVP7|PP307_ARATH (Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H42 PE=2 SV=2)
HSP 1 Score: 500.4 bits (1287), Expect = 4.2e-140
Identity = 279/874 (31.92%), Postives = 467/874 (53.43%), Query Frame = 0
Query: 23 SQLISICNSKSLKEGVC--VHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMP 82
S ++ C S+ V +H+ I+ GL + + N L+ LY++ + AR +FD +
Sbjct: 190 SGVLEACRGGSVAFDVVEQIHARILYQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGLR 249
Query: 83 DRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSC 142
+D SW M + ++ +A LF M LG P + S+++ +C + L++G
Sbjct: 250 LKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQ 309
Query: 143 VHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQK 202
+HG +K GF S + L+ LY A F NM D VT+ T+I+ L Q
Sbjct: 310 LHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGY 369
Query: 203 WAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKY-GKLLHSHLISLGVNLNVVLKTA 262
+A++L+ M G+ P+ T L+ S G + G+ LH++ LG N ++ A
Sbjct: 370 GEKAMELFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGA 429
Query: 263 LVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSGIPPH 322
L+++Y+ ++E A+ +T ++V LW ++ + ++ + F++M++ I P+
Sbjct: 430 LLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPN 489
Query: 323 SFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDALRVFG 382
+TY S L C L LELG+QIH Q+I + + S LI+MY K +D A +
Sbjct: 490 QYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILI 549
Query: 383 SIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQISMFH 442
A V+ WT++I+G ++ F+ F M G++ + L++ + AC ++
Sbjct: 550 RFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKE 609
Query: 443 GYILKSMA-----YHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 502
G + + A D+ NALV Y+R G ++++ + D I + +L + Q
Sbjct: 610 GQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQ 669
Query: 503 MGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLDNTRSV 562
G++E AL+ M + + + + S V AA+ ++ GKQ+H + G D+ V
Sbjct: 670 SGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITKTGYDSETEV 729
Query: 563 KNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNMRLAGL 622
N+L+ Y K G + DA K F E++ + VSWN +I+ + +G S AL +FD M + +
Sbjct: 730 CNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNV 789
Query: 623 KPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQLEKAM 682
+P+ +TL+ VLSACS LVD G+ YF++M + + P +HYVCV+D+ RAG L +A
Sbjct: 790 RPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAK 849
Query: 683 EIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASLYDELD 742
E ++ MP + DA V++TLLSAC +H+N+ +GE A L+L+P DS+ Y+LL++LY
Sbjct: 850 EFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSK 909
Query: 743 RPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFLRAEFK 802
+ D TR+ M+++G++K P QSW+E+ IH F GD++HP +++ E + L
Sbjct: 910 KWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRAS 969
Query: 803 SRGF----------LYGDDEDSC--HHSEKLALAFGLVRMPPKGVVRIMKNISICRECHD 862
G+ L + +D HSEKLA++FGL+ +P + +MKN+ +C +CH
Sbjct: 970 EIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKNLRVCNDCHA 1029
Query: 863 FILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
+I +KV REI+VRD R H F G+CSCK Y
Sbjct: 1030 WIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDY 1063
BLAST of Carg22141 vs. Swiss-Prot
Match:
sp|Q7Y211|PP285_ARATH (Pentatricopeptide repeat-containing protein At3g57430, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H81 PE=2 SV=2)
HSP 1 Score: 473.4 bits (1217), Expect = 5.5e-132
Identity = 256/826 (30.99%), Postives = 453/826 (54.84%), Query Frame = 0
Query: 87 WTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYAI 146
W + + VR +A + M LG P+ + L+++ ++ ++++LG +H +
Sbjct: 65 WIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVY 124
Query: 147 KGGFESKPV-LGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 206
K G+ V + TL++LY KC Y+ F + + + V+W ++ISSL +KW AL
Sbjct: 125 KFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERNQVSWNSLISSLCSFEKWEMAL 184
Query: 207 QLYITMLESGVAPNEFTFTKLLATTSFM----GLKYGKLLHSHLISLGVNLNVVLKTALV 266
+ + ML+ V P+ FT ++ S + GL GK +H++ + G LN + LV
Sbjct: 185 EAFRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKG-ELNSFIINTLV 244
Query: 267 DMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSGIPPHSF 326
MY +L + + +D+ W +++S QN ++ EA+ +EM + G+ P F
Sbjct: 245 AMYGKLGKLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 304
Query: 327 TYSSALSACTLLPSLELGKQIHLQVILAG-LEADVCAGSALINMYMKSDLIDDALRVFGS 386
T SS L AC+ L L GK++H + G L+ + GSAL++MY + RVF
Sbjct: 305 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCKQVLSGRRVFDG 364
Query: 387 IATPSVICWTSLISGLAEHGFEQDCYRYFLDM-QAAGVQPNSFTLSSILGACK-----NQ 446
+ + W ++I+G +++ +++ F+ M ++AG+ NS T++ ++ AC ++
Sbjct: 365 MFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSR 424
Query: 447 ISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLATRLNQ 506
HG+++K D V N L+D Y+R G +D A R+ M+ RD +T+ ++ T
Sbjct: 425 KEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVF 484
Query: 507 MGDHEMALKTIDSMR-----------ADNVKMDEISLASLVSAATGVGTIETGKQLHCYS 566
HE AL + M+ ++K + I+L +++ + + + GK++H Y+
Sbjct: 485 SEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYA 544
Query: 567 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 626
++ L +V ++LVD Y K GCL+ + K F++I + +V++WN +I ++G+ A+
Sbjct: 545 IKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAI 604
Query: 627 SAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 686
M + G+KP+ +T +SV +ACS +VD G+ F M+ + +EP+ DHY CV+DL
Sbjct: 605 DLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDL 664
Query: 687 HGRAGQLEKAMEIVEAMPFEAD-AKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSF 746
GRAG++++A +++ MP + + A + +LL A ++H N+ +GE A+ +QL+P +S
Sbjct: 665 LGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASH 724
Query: 747 YLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDM 806
Y+LLA++Y D +T+ R+ M+++G+RK P SW+E ++H F+ GD SHP+ +
Sbjct: 725 YVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKL 784
Query: 807 EEKLEFLRAEFKSRGF-------LYGDDEDS-----CHHSEKLALAFGLVRMPPKGVVRI 866
LE L + G+ L+ +ED C HSEKLA+AFG++ P ++R+
Sbjct: 785 SGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRV 844
Query: 867 MKNISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
KN+ +C +CH +K+V+REI++RD R H F NG+CSC Y
Sbjct: 845 AKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDY 889
BLAST of Carg22141 vs. Swiss-Prot
Match:
sp|Q9M1V3|PP296_ARATH (Pentatricopeptide repeat-containing protein At3g63370, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H83 PE=2 SV=2)
HSP 1 Score: 448.4 bits (1152), Expect = 1.9e-124
Identity = 274/877 (31.24%), Postives = 459/877 (52.34%), Query Frame = 0
Query: 20 EGCSQLISICNS-KSLKEGVCVHSPIIKLGLLGNL-YLSNNLLSLYAKRFGLKQARNLFD 79
E + ++ +C +++ +G +HS I K L +L+ L+ +Y K L A +FD
Sbjct: 81 EAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAGKLVFMYGKCGSLDDAEKVFD 140
Query: 80 EMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKL 139
EMPDR +W TM AYV +G A L+ M G + L+++C++ R+++
Sbjct: 141 EMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRS 200
Query: 140 GSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDD-ADTVTWTTMISSLV 199
GS +H +K G+ S + L+ +YAK D A F + D V W +++SS
Sbjct: 201 GSELHSLLVKLGYHSTGFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYS 260
Query: 200 QAQKWAEALQLYITMLESGVAPNEFTF-TKLLATTSFMGLKYGKLLHSHLISLGVNLN-V 259
+ K E L+L+ M +G APN +T + L A F K GK +H+ ++ + + +
Sbjct: 261 TSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSEL 320
Query: 260 VLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMS 319
+ AL+ MY+ ++ A ++ Q DV W S+I + QN KEA+ F +M +
Sbjct: 321 YVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAA 380
Query: 320 GIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDA 379
G + +S ++A L +L G ++H VI G ++++ G+ LI+MY K +L
Sbjct: 381 GHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYM 440
Query: 380 LRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACKNQ 439
R F + +I WT++I+G A++ + F D+ ++ + L SIL A
Sbjct: 441 GRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILRASSVL 500
Query: 440 ISM-----FHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLA 499
SM H +IL+ D V+ N LVD Y + + A RV ++K +D +++TS+
Sbjct: 501 KSMLIVKEIHCHILRK-GLLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMI 560
Query: 500 TRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLD 559
+ G+ A++ M + D ++L ++SAA + + G+++HCY LR G
Sbjct: 561 SSSALNGNESEAVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFC 620
Query: 560 NTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNM 619
S+ ++VD Y G L+ A F+ I ++ + +I+ ++G AA+ FD M
Sbjct: 621 LEGSIAVAVVDMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKM 680
Query: 620 RLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQ 679
R + PD I+ L++L ACS L+D G + + M + +EP +HYVC++D+ GRA
Sbjct: 681 RHENVSPDHISFLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANC 740
Query: 680 LEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASL 739
+ +A E V+ M E A+V+ LL+AC+ H +GE A+R L+L+P + +L++++
Sbjct: 741 VVEAFEFVKMMKTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNV 800
Query: 740 YDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKL-EF 799
+ E R + K R M+ GM K P SW+E+ GK+H F D+SHPE ++ EKL E
Sbjct: 801 FAEQGRWNDVEKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEV 860
Query: 800 LRAEFKSRGFL-----------YGDDEDSCH-HSEKLALAFGLVRMPPKGVVRIMKNISI 859
R + G++ G+ H HSE++A+A+GL+R P + +RI KN+ +
Sbjct: 861 TRKLEREVGYVADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRV 920
Query: 860 CRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSC 874
CR+CH F L +K+ R+IV+RD +R H F +G CSC
Sbjct: 921 CRDCHTFCKLVSKLFRRDIVMRDANRFHHFESGLCSC 956
BLAST of Carg22141 vs. Swiss-Prot
Match:
sp|Q9SMZ2|PP347_ARATH (Pentatricopeptide repeat-containing protein At4g33170 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H53 PE=3 SV=1)
HSP 1 Score: 447.2 bits (1149), Expect = 4.2e-124
Identity = 271/939 (28.86%), Postives = 452/939 (48.14%), Query Frame = 0
Query: 31 SKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGLKQARNLFDEMPDRDVVSWTTM 90
S L G C H+ I+ +L NNL+S+Y+K L AR +FD+MPDRD+VSW ++
Sbjct: 52 SSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLVSWNSI 111
Query: 91 QAAYVRHG-----NYNDAFELFDLMTTLGNSPNEFTLSTLIRSCSETRELKLGSCVHGYA 150
AAY + N AF LF ++ + TLS +++ C + + HGYA
Sbjct: 112 LAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWASESFHGYA 171
Query: 151 IKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWTTMISSLVQAQKWAEAL 210
K G + + L+++Y K K+ F M D V W M+ + ++ EA+
Sbjct: 172 CKIGLDGDEFVAGALVNIYLKFGKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAI 231
Query: 211 QLYITMLESGVAPNEF-------------------------------------------- 270
L SG+ PNE
Sbjct: 232 DLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYL 291
Query: 271 -------------------------TFTKLLAT-TSFMGLKYGKLLHSHLISLGVNLNVV 330
TF +LAT L G+ +H + LG++L +
Sbjct: 292 HSGQYSALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLT 351
Query: 331 LKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQEMRMSG 390
+ +L++MY ++ +A V + E+D+ W S+I+ QN EA+ F ++ G
Sbjct: 352 VSNSLINMYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCG 411
Query: 391 IPPHSFTYSSALSACTLLP-SLELGKQIHLQVILAGLEADVCAGSALINMYMKSDLIDDA 450
+ P +T +S L A + LP L L KQ+H+ I +D +ALI+ Y ++ + +A
Sbjct: 412 LKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA 471
Query: 451 LRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSILGACK-- 510
+F ++ W ++++G + + F M G + + FTL+++ C
Sbjct: 472 EILF-ERHNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFL 531
Query: 511 ---NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPITYTSLA 570
NQ H Y +KS D+ V + ++D Y + G + A+ ++ D + +T++
Sbjct: 532 FAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMI 591
Query: 571 TRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYSLRYGLD 630
+ + G+ E A MR V DE ++A+L A++ + +E G+Q+H +L+
Sbjct: 592 SGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLNCT 651
Query: 631 NTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAALSAFDNM 690
N V SLVD Y K G + DA F+ I ++ +WN ++ LA +G L F M
Sbjct: 652 NDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFKQM 711
Query: 691 RLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDLHGRAGQ 750
+ G+KPD +T + VLSACS LV + ++M + I+P ++HY C+ D GRAG
Sbjct: 712 KSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRAGL 771
Query: 751 LEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFYLLLASL 810
+++A ++E+M EA A +Y+TLL+AC++ + G+ VA + L+L+P DSS Y+LL+++
Sbjct: 772 VKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLSNM 831
Query: 811 YDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDMEEKLEFL 870
Y + D R +M+ ++K P SW+E+ KIH+F+ DRS+ + + K++ +
Sbjct: 832 YAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVKDM 891
Query: 871 RAEFKSRGFLYGDD------------EDSCHHSEKLALAFGLVRMPPKGVVRIMKNISIC 877
+ K G++ D +HSEKLA+AFGL+ PP +R++KN+ +C
Sbjct: 892 IRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLRVC 951
BLAST of Carg22141 vs. TrEMBL
Match:
tr|A0A1Q3C880|A0A1Q3C880_CEPFO (PPR domain-containing protein/PPR_2 domain-containing protein/DYW_deaminase domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_19797 PE=4 SV=1)
HSP 1 Score: 1035.0 bits (2675), Expect = 9.5e-299
Identity = 498/882 (56.46%), Postives = 662/882 (75.06%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
M+C+T K N +ELYR E CS+++S+CNSKSLKEG+CVHSPIIKLG +LY++NNLL
Sbjct: 1 MICKTAAKLTNRSELYRFEYVCSRVVSLCNSKSLKEGICVHSPIIKLGFHHHLYMNNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLY K FG AR+ FD+MP +DVVSWT + +AYV+ Y A ELFDLM LG SPNEF
Sbjct: 61 SLYHKCFGADHARHFFDKMPYKDVVSWTAIMSAYVQSAIYEKALELFDLMVILGQSPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLS+ IRSC+ R+ G+ + + IK GF+ P+LG LIDLY+KC ++YE F+ +
Sbjct: 121 TLSSAIRSCAALRDFDQGTRLQAFVIKHGFDMNPILGSNLIDLYSKCKFIMESYEVFKLL 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
+ D V WTT+ISS VQ +KW++ L+LYI M+E+ + PNEFTF KLL ++F+GLK G+L
Sbjct: 181 GNGDIVCWTTVISSFVQDRKWSQGLELYIRMIEARIPPNEFTFVKLLVASAFLGLKCGRL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
+H+H+I GV LNVVLKTAL DMYS Q +EYAIKV+ TPE DVFLWT+IIS F +N K
Sbjct: 241 VHAHMIMWGVKLNVVLKTALADMYSKCQMMEYAIKVSKLTPECDVFLWTAIISGFTKNLK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
+EA+AA+ EM SGI P+ +TY+S L+AC+ +PSLELGKQIH + I++GLE +V G+A
Sbjct: 301 FREAVAAYLEMEKSGILPNYYTYNSVLNACSSIPSLELGKQIHSRAIMSGLENEVSVGNA 360
Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
L++MYMK S+ I+DALRVF + +VI WTSLI+G+ E+GFEQD + F++M+A GV P
Sbjct: 361 LVDMYMKCSNGIEDALRVFRGMNLLNVISWTSLIAGIIENGFEQDSFHLFMEMRAVGVPP 420
Query: 421 NSFTLSSILGAC-----KNQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
NSFTLS IL AC +Q+ HGY++K+ HD VVGNALV YAR GM+DDA V
Sbjct: 421 NSFTLSVILRACGTVNSSSQLMKLHGYVIKTKLDHDTVVGNALVHAYARLGMLDDAWHVF 480
Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
M HRD ITYTSLA+ +NQ G HEMALK I M D+VKMD SLA+ +SA+ G+ + E
Sbjct: 481 GMMSHRDAITYTSLASIMNQRGSHEMALKIISRMNNDDVKMDGFSLATFLSASAGLTSTE 540
Query: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
TGKQLHC+SL+ GL + SV N +VD YGK G + D +AFEEIT PDV SWNGLIS LA
Sbjct: 541 TGKQLHCHSLKSGLGSWNSVSNGVVDLYGKCGYIDDVRQAFEEITAPDVFSWNGLISALA 600
Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
+GHI ALS FD+MRLAG+KPDS+T VL ACSQG++VD G+ YFQ+M+E H IEP L
Sbjct: 601 SSGHIYCALSTFDDMRLAGVKPDSVTFFLVLFACSQGKMVDMGLEYFQSMKEKHGIEPWL 660
Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
DHYVC++D+ +AG+L++A+ ++E MPF DA VYKTLL+ACKLHRNV LGED+ARRGL+
Sbjct: 661 DHYVCLVDVLSQAGRLQEALGVIETMPFAPDAMVYKTLLNACKLHRNVPLGEDMARRGLE 720
Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
L P D +FY+LLA+LYD + + KTR+LM++RG++++P QSW+E+ K+H+F+TGD
Sbjct: 721 LHPSDPAFYILLANLYDACGQCEFGEKTRRLMRERGLKRNPGQSWMEIRNKVHLFVTGDN 780
Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNI 840
SHP+++ + EK+E + +EF G++Y D DS +HSE+LA+AFG + P K + I+ N+
Sbjct: 781 SHPQIHAIREKIESIISEFNDCGYVYQDSGDSSYHSERLAVAFGFLTTPSKAPICIINNM 840
Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
ICR+CH+F+ L T++V+++I+VR G+R+H F NG CSC+ Y
Sbjct: 841 PICRDCHNFLTLLTQLVDKKIIVRVGNRIHTFGNGECSCQDY 882
BLAST of Carg22141 vs. TrEMBL
Match:
tr|A0A2P5FGP2|A0A2P5FGP2_9ROSA (DYW domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_073370 PE=4 SV=1)
HSP 1 Score: 1031.9 bits (2667), Expect = 8.1e-298
Identity = 499/873 (57.16%), Postives = 652/873 (74.68%), Query Frame = 0
Query: 10 VNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLYAKRFGL 69
+N +E +R E+ C +++S CNS+SL++G+CVHSP+IKLGL GNL+LSNNLLSLYAK FG
Sbjct: 14 LNRSEAHRFEDVCLRIVSSCNSQSLEQGLCVHSPVIKLGLHGNLFLSNNLLSLYAKCFGA 73
Query: 70 KQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLSTLIRSC 129
+ A +LFDEMP RDVVSWT + +AY R G + A ELFD M G SPNEFT S+++RSC
Sbjct: 74 EHAHDLFDEMPYRDVVSWTGLVSAYSRSGKHGKALELFDSMIASGESPNEFTFSSVLRSC 133
Query: 130 SETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDADTVTWT 189
S E +G+ +H Y IK G +S L ++ID YAKC C+++A+ FR MD +TVTWT
Sbjct: 134 SAVGEFDMGTRIHNYMIKLGLDSNNFLLSSMIDFYAKCGCSEEAHNVFRGMDSGNTVTWT 193
Query: 190 TMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHSHLISLG 249
TMISSLVQAQKW AL+ Y+ M+ + V PNEFTF +L + ++ L YGKLLH+HLI+ G
Sbjct: 194 TMISSLVQAQKWILALKHYVDMINAQVPPNEFTFAMILEASCYLDLDYGKLLHAHLITWG 253
Query: 250 VNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKEAIAAFQ 309
+ L+++LKTALV+MYS Q ++ A+KV QTPE DV LWTS+IS F +SKVKEA++A Q
Sbjct: 254 IRLSLILKTALVNMYSSSQRMKDALKVLRQTPEYDVVLWTSVISGFTHDSKVKEAVSALQ 313
Query: 310 EMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALINMYMK-S 369
EM + G P+SFTYS+ L AC+ + L+LGKQIH + I GLEADVC G+AL++MYMK S
Sbjct: 314 EMEIFGFVPNSFTYSNLLKACSTVSLLDLGKQIHSRSIRTGLEADVCVGNALVDMYMKCS 373
Query: 370 DLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSFTLSSIL 429
+L++D RVF I +P+VI WTSLI+G A+HGFEQD + +FL M+A GVQPNSFTLS++L
Sbjct: 374 NLVEDGSRVFRGITSPNVISWTSLIAGFADHGFEQDSFHFFLQMRAVGVQPNSFTLSAVL 433
Query: 430 GACKNQISM-----FHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTMKHRDPI 489
AC+ S+ HGYI+K+ + VV NALVD YA GMV+D+ RV R MK RD I
Sbjct: 434 RACRTNKSLSQTLKIHGYIIKAKECSEAVVANALVDAYAALGMVNDSWRVTRKMKDRDII 493
Query: 490 TYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGKQLHCYS 549
TYTSLATR+N++G+HEMAL I ++ DN++MD SLAS +SA+ + T+ETGKQLHCYS
Sbjct: 494 TYTSLATRMNKLGNHEMALNVIKHIKDDNIEMDGFSLASFLSASAALATMETGKQLHCYS 553
Query: 550 LRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNGHISAAL 609
++ G + SV N LVD Y K G D +AFEE+++PDVVSWN LIS LA NG++++AL
Sbjct: 554 IKSGFSSCTSVSNGLVDLYWKCGYADDGYRAFEEMSDPDVVSWNQLISGLASNGYVNSAL 613
Query: 610 SAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHYVCVIDL 669
SAFD+MRLAGLKPDSIT LSVL ACS+G LVD G+ YF +M+ + I P LDHYVC++DL
Sbjct: 614 SAFDDMRLAGLKPDSITFLSVLFACSRGGLVDLGVDYFHSMKNKYYITPQLDHYVCLVDL 673
Query: 670 HGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDPYDSSFY 729
GRAGQLE AME++ MPF D +YKTLL +CKLH N+ L ED+ARRGL+LDP D +FY
Sbjct: 674 LGRAGQLENAMEVIVNMPFNPDPLIYKTLLGSCKLHGNIPLAEDMARRGLELDPSDPAFY 733
Query: 730 LLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHPEMNDME 789
LLLA+LYDE+ +L KTR+LM D+G+RK+PSQSW+E+ K+H+F GDRSHP N++
Sbjct: 734 LLLANLYDEMGHSNLGKKTRQLMTDKGVRKNPSQSWIEIRNKVHIFNAGDRSHPLTNEIH 793
Query: 790 EKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISICRECHDF 849
+K+ L E K RG+ D E S +HSEKLA+ FGL+ P K +RI KN+ IC ECHDF
Sbjct: 794 DKIVSLTNELKRRGYSLKDTEGSSYHSEKLAVGFGLLNTPSKAAIRISKNMRICSECHDF 853
Query: 850 ILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
I+L T+ ++R+++VRDG+R+H F G CSCK +
Sbjct: 854 IMLLTRFIDRDVIVRDGNRIHAFKRGQCSCKGF 886
BLAST of Carg22141 vs. TrEMBL
Match:
tr|A0A2P5CB14|A0A2P5CB14_PARAD (DYW domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_168210 PE=4 SV=1)
HSP 1 Score: 1028.9 bits (2659), Expect = 6.8e-297
Identity = 499/879 (56.77%), Postives = 655/879 (74.52%), Query Frame = 0
Query: 6 VPKFVNIN--ELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLLSLY 65
V K N+N E +R E+ C +++S CNS+SL++G+CVHSP+IKLGL GNL+LSNNLLSLY
Sbjct: 7 VNKLFNLNRSEAHRFEDVCLRIVSSCNSQSLEQGLCVHSPVIKLGLHGNLFLSNNLLSLY 66
Query: 66 AKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEFTLS 125
AK FG + A +LFDEMP RDVVSWT + +AY R G ++ A ELFD M G SPNEFT S
Sbjct: 67 AKCFGAEHAHDLFDEMPCRDVVSWTGLVSAYSRSGKHDKALELFDSMIASGESPNEFTFS 126
Query: 126 TLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNMDDA 185
+++RSCS E +G+ +H + IK G +S L ++ID YAKC C+++A+ FR MD
Sbjct: 127 SVLRSCSAVEEFDMGTRIHNHMIKRGLDSNSFLLSSMIDFYAKCGCSEEAHNVFRGMDSG 186
Query: 186 DTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKLLHS 245
+TVTWTTMISSLVQAQKW AL+ Y+ M+ + V PNEFTF K+L + ++ L YGKLLH+
Sbjct: 187 NTVTWTTMISSLVQAQKWILALKHYVDMINAQVPPNEFTFAKILEASCYLDLDYGKLLHA 246
Query: 246 HLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSKVKE 305
H I+ G+ L+++LKTALV+MYS Q ++ A KV QTPE DV LWTS+IS +SKVKE
Sbjct: 247 HSITRGIRLSLILKTALVNMYSSSQRMKDAFKVLRQTPEYDVVLWTSVISGLTHDSKVKE 306
Query: 306 AIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSALIN 365
A++A QEM +SG P+SFTYS+ L AC+ + LELGKQIH + I GLEADVC G+AL++
Sbjct: 307 AVSALQEMEISGFVPNSFTYSNLLKACSTVSFLELGKQIHSRSIRTGLEADVCVGNALVD 366
Query: 366 MYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQPNSF 425
MYMK S+L++D L+VF + +P+VI WTSLI+G A+HGFEQD + FL M+A GVQPNSF
Sbjct: 367 MYMKCSNLVEDGLKVFRGMTSPNVISWTSLIAGFADHGFEQDSFHVFLQMRAVGVQPNSF 426
Query: 426 TLSSILGACKNQISM-----FHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVIRTM 485
TLS++L AC+ S+ HGYI+K+ + VV NALVD YA GMV+ + RV R M
Sbjct: 427 TLSAVLRACRTNKSLSQTLKIHGYIIKAKECSEAVVANALVDAYAALGMVNYSWRVTRKM 486
Query: 486 KHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIETGK 545
K RD ITYTSLATR+N++G+HEMAL I M+ DN++MD SLAS +SA+ + T+ETGK
Sbjct: 487 KDRDIITYTSLATRMNKLGNHEMALNVIKHMKDDNIEMDGFSLASFLSASAALATMETGK 546
Query: 546 QLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILALNG 605
QLHCYS++ G + SV N LVD Y K G D +AFEEI++PDVVSWN LIS LA NG
Sbjct: 547 QLHCYSIKSGFSSCTSVSNGLVDLYWKCGYADDGYRAFEEISDPDVVSWNQLISGLASNG 606
Query: 606 HISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPALDHY 665
++++ALSAFD+MRLAGLKPDSIT +SVL ACS+G LVD G+ YF++M+ + I P LDHY
Sbjct: 607 YVNSALSAFDDMRLAGLKPDSITFVSVLFACSRGGLVDLGVDYFRSMKNKYYITPQLDHY 666
Query: 666 VCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQLDP 725
VC++DL GRAGQLE AME++ MPF D +YKTLL +CKLH N+ L ED+ARRGL+LDP
Sbjct: 667 VCLVDLLGRAGQLENAMEVIVNMPFNPDPLIYKTLLGSCKLHGNIPLAEDMARRGLELDP 726
Query: 726 YDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDRSHP 785
D +FYLLLA+LYDE+ + +L KTR+LM D+G+RK+PSQSW+E+ +H+F GDR HP
Sbjct: 727 SDPAFYLLLANLYDEMGQSNLGKKTRQLMTDKGVRKNPSQSWIEIRNTVHIFNAGDRPHP 786
Query: 786 EMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNISIC 845
N++ +K+ L E K RG+ + D E S +HSEKLA+AFGL+ P K +RI KN+ IC
Sbjct: 787 LTNEIHDKIVSLTNELKRRGYSFKDTEGSSYHSEKLAVAFGLLNTPSKAAIRISKNMRIC 846
Query: 846 RECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCKHY 877
ECHDFI+L T+ ++R+++VRDG+R+H F G CSC+ +
Sbjct: 847 SECHDFIMLLTRFIDRDVIVRDGNRIHAFKRGQCSCRGF 885
BLAST of Carg22141 vs. TrEMBL
Match:
tr|A0A2I4GTT8|A0A2I4GTT8_9ROSI (LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At5g52850, chloroplastic OS=Juglans regia OX=51240 GN=LOC109010839 PE=4 SV=1)
HSP 1 Score: 1023.8 bits (2646), Expect = 2.2e-295
Identity = 506/880 (57.50%), Postives = 661/880 (75.11%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLC+TV K + NELY ++S+CNS SLKEG+CVHSPIIKLGL +LYL+N+LL
Sbjct: 1 MLCKTVTKICSRNELY------IGVLSLCNSMSLKEGLCVHSPIIKLGLQRDLYLNNHLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLYAK FG+ AR FDEMP +DVVSWT + + VR+GN+ A ELF M G PNEF
Sbjct: 61 SLYAKCFGVGNARYFFDEMPYKDVVSWTGILSTCVRNGNHAQALELFGSMINFGYYPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLS+ +RSCS + G+ + Y +K G++S P+L LI LY+KCDCT++AYE F +M
Sbjct: 121 TLSSALRSCSALGDFHYGTRIQAYMVKNGYDSNPILASALIGLYSKCDCTEEAYEVFAHM 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
D D V+W+TMISSLVQAQ+W++ALQLYI M++ GV PNEFTF KLLA S +G+ +GKL
Sbjct: 181 DGGDVVSWSTMISSLVQAQQWSQALQLYIRMIKVGVPPNEFTFVKLLAACSSLGISFGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
+H+H+I LG+ +NV+LKTALVDMYS + +E A+ V+N+TPE DVFLWT+IIS F++N K
Sbjct: 241 VHAHMILLGIEVNVILKTALVDMYSKCRRMEDAVVVSNRTPEHDVFLWTAIISGFSRNMK 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
V+EA+ A +M MS I P++FTYS+ L+AC+ + SLELG+QIH +VI+AGLE DV G+A
Sbjct: 301 VREAVGALHQMEMSEIVPNNFTYSTVLNACSSILSLELGEQIHSRVIMAGLEDDVSVGNA 360
Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
L++MYMK S+LID+AL+VF +A+P+VI WTSLI+G AEHGFE D ++ FL+M+A G+QP
Sbjct: 361 LVDMYMKCSNLIDNALKVFRGMASPNVITWTSLIAGFAEHGFEADSFQAFLEMRAVGLQP 420
Query: 421 NSFTLSSILGACK-----NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
NSFTLSSILGAC+ Q HGYI+K+ A DIV+GNALVD YA GMVD+A VI
Sbjct: 421 NSFTLSSILGACRTIKSHGQTMKLHGYIIKTKAEKDIVLGNALVDAYAGLGMVDEAWCVI 480
Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
R M RD ITYT+LATR+NQMG H AL I M ++++MD S+AS +SA+ +G++E
Sbjct: 481 RKMSRRDAITYTTLATRMNQMGHHGSALNIITHMNYEDIEMDGFSMASFLSASASLGSME 540
Query: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
GKQLHC+S++ GL SV NSLVD YGK G + DA +AF EI EPDV SWNGLIS LA
Sbjct: 541 AGKQLHCWSVKSGLGCWLSVSNSLVDLYGKCGRMHDAHRAFREIDEPDVASWNGLISGLA 600
Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
NG+ S ALSAF++MRLAG+KPDS+T L VLSACS G L+D G+ +F++MR HN+ P L
Sbjct: 601 SNGYFSFALSAFEDMRLAGVKPDSVTFLLVLSACSHGDLLDLGLEHFRSMRNIHNMVPQL 660
Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
DHYVC+IDL GRAGQL +AM++++ +PF DA +YKTLLSAC+LH NV LGED+AR+GL
Sbjct: 661 DHYVCLIDLLGRAGQLGEAMKVIKTLPFRPDALIYKTLLSACRLHGNVPLGEDMARQGLN 720
Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
L P D +FY+LLA+LYD + D KTR+LM++R +R SP QSW+E +IHVF G
Sbjct: 721 LHPSDPAFYILLANLYDRSGQSDFGEKTRRLMRERXLRSSPCQSWMETRNQIHVFTAGHI 780
Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYGDDEDSCHHSEKLALAFGLVRMPPKGVVRIMKNI 840
SHPE+ +++ K+E L EFK RG+LY + D +HSEKLA AFGL+ P K + I+KN
Sbjct: 781 SHPEITNIKAKIESLMIEFKHRGYLYHGNGDRSYHSEKLATAFGLLNTPSKAPILIIKNT 840
Query: 841 SICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCK 875
+C +CH FI+ T++V+REIV+R+G+R+H F G CSC+
Sbjct: 841 RMCMDCHSFIMHVTELVDREIVLREGNRVHSFKKGRCSCR 874
BLAST of Carg22141 vs. TrEMBL
Match:
tr|A0A061G2B3|A0A061G2B3_THECC (Pentatricopeptide repeat-containing protein, putative OS=Theobroma cacao OX=3641 GN=TCM_015273 PE=4 SV=1)
HSP 1 Score: 1019.2 bits (2634), Expect = 5.4e-294
Identity = 504/882 (57.14%), Postives = 665/882 (75.40%), Query Frame = 0
Query: 1 MLCRTVPKFVNINELYRLEEGCSQLISICNSKSLKEGVCVHSPIIKLGLLGNLYLSNNLL 60
MLC+T + + NE+ RLEE CS+++S CNS SLKEG+ VH PI+KLGL +LYL+NNLL
Sbjct: 1 MLCKTGSRIIKGNEVTRLEETCSRVLSFCNSNSLKEGISVHCPIVKLGLQDHLYLNNNLL 60
Query: 61 SLYAKRFGLKQARNLFDEMPDRDVVSWTTMQAAYVRHGNYNDAFELFDLMTTLGNSPNEF 120
SLY K G+ +AR+ FDEMP +DVVSW+ + +AYV+ GN++ A E FD M G PNEF
Sbjct: 61 SLYGKCLGVDKARHFFDEMPFKDVVSWSGILSAYVKRGNHDCALEFFDSMLISGQRPNEF 120
Query: 121 TLSTLIRSCSETRELKLGSCVHGYAIKGGFESKPVLGCTLIDLYAKCDCTKQAYETFRNM 180
TLS+++RSCS E + G+C+ Y IK GFE P+L L+D Y+K + T +AY+ F +
Sbjct: 121 TLSSVLRSCSALGEFQYGTCIQAYMIKQGFEQNPILVSGLLDFYSKFNFTGEAYKLFIYV 180
Query: 181 DDADTVTWTTMISSLVQAQKWAEALQLYITMLESGVAPNEFTFTKLLATTSFMGLKYGKL 240
+ DTV+WTTMISS VQAQ+W++AL LY+ M+E+GV PNEFTF KLL S +GLKYGKL
Sbjct: 181 GNHDTVSWTTMISSFVQAQRWSKALLLYVDMVEAGVPPNEFTFVKLLGVCSVLGLKYGKL 240
Query: 241 LHSHLISLGVNLNVVLKTALVDMYSGYQELEYAIKVANQTPEKDVFLWTSIISCFNQNSK 300
+H+H++ GV LNVV+KTALVDMY+ Q +E AIKV+N T E D L T++IS F QN
Sbjct: 241 VHAHMLLRGVKLNVVVKTALVDMYARCQRMEDAIKVSNLTSEYDTLLCTAVISGFAQNFM 300
Query: 301 VKEAIAAFQEMRMSGIPPHSFTYSSALSACTLLPSLELGKQIHLQVILAGLEADVCAGSA 360
++AIAAF+EMR+SGI P++FT+SS L+ +L+ SLELG+QIH +V++AGLE DV G+A
Sbjct: 301 FRKAIAAFREMRISGILPNNFTFSSILNVSSLMLSLELGEQIHSRVVVAGLEHDVNVGNA 360
Query: 361 LINMYMK-SDLIDDALRVFGSIATPSVICWTSLISGLAEHGFEQDCYRYFLDMQAAGVQP 420
LI MY+K SD I DALRVF I+ P+VI WTSLI+G AEHGF+QD + F++M+AAGVQP
Sbjct: 361 LITMYVKCSDKIKDALRVFRGISLPNVISWTSLIAGFAEHGFQQDSFHLFMEMRAAGVQP 420
Query: 421 NSFTLSSILGACK-----NQISMFHGYILKSMAYHDIVVGNALVDGYARSGMVDDARRVI 480
NSFT+SSI+G+ Q M HG+++K+ Y DI V NAL D YA GM+DDA +V+
Sbjct: 421 NSFTISSIIGSFNAAKLLPQTLMLHGHVIKTNLYKDIAVQNALTDVYAGLGMLDDAWQVV 480
Query: 481 RTMKHRDPITYTSLATRLNQMGDHEMALKTIDSMRADNVKMDEISLASLVSAATGVGTIE 540
M HRD ITYTSLA+R+NQMG HE+AL I M D++K+D S+AS +SA+ +GT+
Sbjct: 481 HMMSHRDAITYTSLASRINQMGHHELALHIITDMYNDDIKIDAFSMASFLSASADLGTLV 540
Query: 541 TGKQLHCYSLRYGLDNTRSVKNSLVDFYGKVGCLKDACKAFEEITEPDVVSWNGLISILA 600
TGKQLHC+S++ GL SV N LVD YGK GC+ DA +AF EIT PD+ SWNGLIS LA
Sbjct: 541 TGKQLHCHSMKSGLGRWVSVANGLVDLYGKCGCICDAQRAFGEITVPDIFSWNGLISGLA 600
Query: 601 LNGHISAALSAFDNMRLAGLKPDSITLLSVLSACSQGRLVDFGMHYFQTMRETHNIEPAL 660
G IS+ALSAFD+MRLAG++PDS+T L +LSAC+ G+LVD G+ YFQ+MRE H+I P L
Sbjct: 601 SIGSISSALSAFDDMRLAGVRPDSVTFLLLLSACNNGKLVDLGLEYFQSMREVHDIVPQL 660
Query: 661 DHYVCVIDLHGRAGQLEKAMEIVEAMPFEADAKVYKTLLSACKLHRNVLLGEDVARRGLQ 720
DHYV ++D+ GR G+LE+AME+V+ MPF ADA +YKTLL ACK HRN+ L ED+ARRGL+
Sbjct: 661 DHYVHLVDILGRGGRLEEAMEVVQTMPFRADASIYKTLLRACKAHRNIPLAEDMARRGLE 720
Query: 721 LDPYDSSFYLLLASLYDELDRPDLSTKTRKLMQDRGMRKSPSQSWVELSGKIHVFITGDR 780
LDP D +FY+LLA+LYD+ R D KTRKLM+++ +RK+PSQSWV++ K+H+F+ G+R
Sbjct: 721 LDPSDPAFYILLANLYDDSGRHDFGEKTRKLMREKQLRKNPSQSWVQIRNKVHLFVAGER 780
Query: 781 SHPEMNDMEEKLEFLRAEFKSRGFLYG--DDEDSCHHSEKLALAFGLVRMPPKGVVRIMK 840
SHP++N++ EK+E + AE KS +LY DS +HSEKLA+AFGL+ P K + I+K
Sbjct: 781 SHPQINEIYEKIESIDAEIKSHRYLYQGMGIGDSYYHSEKLAVAFGLLNTPSKIPIYIIK 840
Query: 841 NISICRECHDFILLATKVVEREIVVRDGSRLHVFNNGSCSCK 875
N SICR CH+FI T +V++EI+VR+G+RLH F G CSC+
Sbjct: 841 NNSICRNCHNFINFVTHLVDKEIIVREGNRLHSFRKGECSCR 882
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022945787.1 | 0.0e+00 | 98.75 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita ... | [more] |
XP_023542503.1 | 0.0e+00 | 97.83 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita ... | [more] |
XP_022968638.1 | 0.0e+00 | 97.03 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Cucurbita ... | [more] |
XP_022141235.1 | 0.0e+00 | 82.88 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic [Momordica ... | [more] |
XP_023875935.1 | 1.3e-309 | 59.75 | pentatricopeptide repeat-containing protein At5g52850, chloroplastic-like [Querc... | [more] |
Match Name | E-value | Identity | Description | |
AT5G52850.1 | 2.6e-249 | 48.45 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT4G13650.1 | 2.3e-141 | 31.92 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
AT3G57430.1 | 3.0e-133 | 30.99 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT1G16480.1 | 2.7e-129 | 30.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
AT4G33170.1 | 2.3e-125 | 28.86 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |