Carg22137 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22137
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	FMN-binding split barrel
Location	Cucurbita_argyrosperma_scaffold_229 : 248091 .. 250048 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AACGCACAACTTCTTTGAGAAAATGCCTGTGGATCACCTACTTCAATAGCGCGTTACCAAGGAAAAAGAAAAGTTGAGAGAATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCGTAACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCCGCTGCCGTTACTTTCGAAGTTGAACTAAACTTCCGTGCTGCATGATGCTTTTGCTCGAATTCTAAGAAGGAGAGAGGAAAACGATTTGTCGATTACTGAACAACTTGCTTTCTGTTGGATGCATTGGAGCTAAAGACTCCATAGCTTTTGGCGTTTTTTCCTGCATTTTTCTTGGCTGCAAAGCTGTGACTAATTTCTATTTTCTGTATTTTCGAATTAAGTGAAAGAGGAAGAGGAAACAATTGTTCTTATTGCGTTACTTGATTTCTATTGAAAACTATGGAGCTCTCATTCCTTTGCCTTTCTTGTTGCTGTTTTCTCTCTCATTCTCTCGGATGCCAAGCTCAGAGCCGGAGACTAGATTTCTTTATTCATTTTCCTATTAAGTGAAAGAGGAAGAGGAAACAATTGTTGTTGTTGCGTTACTTGATTTCTATTGAAAACTATGGAGCTCACGTTCCTTTGCCTTTCTTGTTGTTGCTGTTTTCTCTCTCATTTTCTCGGATGCCAAGCTCAGAGCCGGAGACTAGATTTCTTTATTATTTTTCCTATTAAGTGAAAGAGGAAGAGGAAACAATTGTTTTGTTTGCTTACTTGATCTCTATTTTAAGCAATGAAGCTTAAGATTCCACAGACGTTCTCTACAGATTTTTCCGGCATTTTCTCGGTTCCTTGCTGAGACTATTTTTCTTCTTTGCTTTTTGTTGTTTGCATATACAGATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGTACTTGAGCTTGCTCTTTTCTTTTCCTCCGTTTTTTAATTTTTTCGATGAGTTTCTTTGTGAAATGCGCGTGCGGATTCTTGACTCCTAATCCTGCTTCCGTTAAAATTATATCCGCTGAGCGGAAATCGCAATAAATTGAATATCGTAGAAGTCTGATTTGAACGCAAAATTTATGGTTAACAAATACTTGGAAGTATTTAATCTACGATCCATACCTAATACAACAAGAGAGAATTCATAATTCAGATAGCGCGTTTTTATCTTAAGAATCCATTATAAGATGCGGTCTTCTCATTATGGAATCGCAATTAGCAAGCATCGGAAGGATTGATATTATAGGCAACTGCGTTGTTTGAGATCTTTCTGAAAAGATTGTGTATCTGATGGTGATGCTTACTCGATCACAGTTGTGCTCTTTGCATGTTATGTATGCACATATATTATAAGTATTCAGTAAGGAGAACCTTAACCAAACGGTTCCTCTCTGTTTATGATATGTAAAAACCTCCGAAGACAAGGATTCAATCTTTATTAAGTGGAAATATCGAATTTAATCACATGTATGCAGAATGCAATGGAAACGTCTGGACACGCATCACAATTTCAGACATTAGGAATGAATGATTAGAATTCTAAATCCCGATATCTTGCTTGCAGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

mRNA sequence

AACGCACAACTTCTTTGAGAAAATGCCTGTGGATCACCTACTTCAATAGCGCGTTACCAAGGAAAAAGAAAAGTTGAGAGAATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

Coding sequence (CDS)

ATGATCGAAACTGCTCTGGCCGTGCGATTCCCCGCCGGCGCCAACTTCTGCTACTCCTCCGCTTTGTCTCATCACCGTTCAGCTTGGACTTCGGAGGATGTGACTAATATAGGCCATGCTAGCGGCTTTTGTCGGCTTTTGCATTCTTGCGCTTCCGACGTGCAATGGAAAAGATGCCGAAGCCTTAACAGTAAGTCCTTCTTGGAAAGGAACAATTTCAGAAAAAATGGAATTCATGCATCGGCAGAGAATTTGGGTTCTGCGTCAGATCCAATTAAACAAAATAGGAGACAATATCATCCATCCGAGGAGCTCGTGAAATCAAGATCAGAGAATGCCGAGGATGTTAGACCTACTGCCGCAGAAACTAGTAGAACAATCGTTGAGGTATCAGTTTATACTAATGCTCTTCTCAATCTTCATACTTATTTGTGA

Protein sequence

MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCRSLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTAAETSRTIVEVSVYTNALLNLHTYL

Homology

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023522718.1 (uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023522719.1 (uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023541607.1 (uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_023541606.1 (uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 258.8 bits (660), Expect = 1.1e-65
Identity = 128/131 (97.71%), Postives = 131/131 (100.00%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAE+LGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAEHLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AETSRTI+EV+
Sbjct: 121 AETSRTIIEVN 131

[Close]

BLAST of Carg22137 vs. NCBI nr
Match: XP_022945791.1 (uncharacterized protein At3g49140-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 257.3 bits (656), Expect = 3.1e-65
Identity = 127/131 (96.95%), Postives = 130/131 (99.24%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR
Sbjct: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120
           SLNSKSFLERNNFRKNGIHASAENL SASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA
Sbjct: 61  SLNSKSFLERNNFRKNGIHASAENLSSASDPIKQNRRQYHPSEELVKSRSENAEDVRPTA 120

Query: 121 AETSRTIVEVS 132
           AET+RTI+EV+
Sbjct: 121 AETTRTIIEVN 131

[Close]

BLAST of Carg22137 vs. TAIR10
Match: AT3G49140.1 (Pentatricopeptide repeat (PPR) superfamily protein)

HSP 1 Score: 72.0 bits (175), Expect = 3.3e-13
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+ +AVR   G  FC S+AL  +R+A +SE+  N  H        ++     Q +R  
Sbjct: 1   MIESVMAVRLSTG--FCSSTALLQYRTAPSSEEGGNCFH--------YASRRVFQPQRIH 60

Query: 61  SLNSKSFLE-------RNNFRKNGIHASAENLGSASDPIKQ-NRRQYHPSEELVKSRSEN 120
            ++   FL+       R + RKN   A+AE + SASDP KQ  + +YHPSEE+  S  +N
Sbjct: 61  HIDGSGFLKYNSDYITRKHLRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQN 120

Query: 121 AEDVRPTAAETSRTIVEVS 132
             D R + AET+RTI+EV+
Sbjct: 121 DGDSRLSPAETTRTIIEVN 129

[Close]

BLAST of Carg22137 vs. Swiss-Prot
Match: sp|Q0WMN5|Y3913_ARATH (Uncharacterized protein At3g49140 OS=Arabidopsis thaliana OX=3702 GN=At3g49140 PE=1 SV=2)

HSP 1 Score: 72.0 bits (175), Expect = 6.0e-12
Identity = 54/139 (38.85%), Postives = 78/139 (56.12%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+ +AVR   G  FC S+AL  +R+A +SE+  N  H        ++     Q +R  
Sbjct: 1   MIESVMAVRLSTG--FCSSTALLQYRTAPSSEEGGNCFH--------YASRRVFQPQRIH 60

Query: 61  SLNSKSFLE-------RNNFRKNGIHASAENLGSASDPIKQ-NRRQYHPSEELVKSRSEN 120
            ++   FL+       R + RKN   A+AE + SASDP KQ  + +YHPSEE+  S  +N
Sbjct: 61  HIDGSGFLKYNSDYITRKHLRKNRTQATAEYVDSASDPEKQTGKSRYHPSEEIRASLPQN 120

Query: 121 AEDVRPTAAETSRTIVEVS 132
             D R + AET+RTI+EV+
Sbjct: 121 DGDSRLSPAETTRTIIEVN 129

[Close]

BLAST of Carg22137 vs. TrEMBL
Match: tr|A0A1S3AY35|A0A1S3AY35_CUCME (uncharacterized protein At3g49140-like OS=Cucumis melo OX=3656 GN=LOC103484131 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 1.3e-48
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSA+ +HR AWTSED ++IG+AS FCRLLHSC SDV WKRC+
Sbjct: 1   MIETALAVRFPAGANFCYSSAVPYHRPAWTSEDASSIGNASSFCRLLHSCTSDVHWKRCQ 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNR-RQYHPSEELVKSRSENAEDVRPT 120
            LNS+S L R+N RKNGI ASAE LGSASDPIKQNR  QYHPSEELVKS +E A+DVRPT
Sbjct: 61  RLNSRSLLGRSNLRKNGIQASAEPLGSASDPIKQNRGLQYHPSEELVKSITEIADDVRPT 120

Query: 121 AAETSRTIVEVS 132
           +AET+RTI+EV+
Sbjct: 121 SAETTRTIIEVN 132

[Close]

BLAST of Carg22137 vs. TrEMBL
Match: tr|A0A0A0L9X9|A0A0A0L9X9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184040 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 8.6e-48
Identity = 102/132 (77.27%), Postives = 116/132 (87.88%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIETALAVRFPAGANFCYSSA+S+HR AWTSEDVT+IG+AS FCRLLHSC SDV WKRC+
Sbjct: 1   MIETALAVRFPAGANFCYSSAVSYHRPAWTSEDVTSIGNASSFCRLLHSCTSDVHWKRCQ 60

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQNR-RQYHPSEELVKSRSENAEDVRPT 120
            LNS+S L R+  +K GI ASAE LGSASDPIKQNR  QYHPSEELVKS +E A+DVRPT
Sbjct: 61  RLNSRSLLGRSYLKKIGIQASAEPLGSASDPIKQNRGLQYHPSEELVKSITEIADDVRPT 120

Query: 121 AAETSRTIVEVS 132
           +AET+RTI+EV+
Sbjct: 121 SAETTRTIIEVN 132

[Close]

BLAST of Carg22137 vs. TrEMBL
Match: tr|A0A2I4GTT9|A0A2I4GTT9_9ROSI (uncharacterized protein At3g49140-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109010837 PE=4 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 7.9e-25
Identity = 70/132 (53.03%), Postives = 88/132 (66.67%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+A+AVRFPAG+N   S+A  + RS W+SEDV      S  CRL HSC  +V W R +
Sbjct: 5   MIESAMAVRFPAGSNVFSSTAFPYCRSMWSSEDVHGTHVTS--CRLPHSCGFNVPWNRTQ 64

Query: 61  SLNSKSFLERNNFRKNGIHASAENLGSASDPIKQN-RRQYHPSEELVKSRSENAEDVRPT 120
            L       RN+  KN I AS E L SA DP +QN R QYHPSEE+ +S SEN++D + T
Sbjct: 65  RLKGMPLRRRNSLVKNRIQASVEKLDSAWDPKRQNGRSQYHPSEEIAESTSENSDDAKLT 124

Query: 121 AAETSRTIVEVS 132
           AAET+RTI+EV+
Sbjct: 125 AAETARTIIEVN 134

[Close]

BLAST of Carg22137 vs. TrEMBL
Match: tr|A0A2N9IS07|A0A2N9IS07_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51808 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-24
Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+A+AVRFPAGAN C S+A+ + RS W+SEDV  + H + + RL H    DV W R R
Sbjct: 3   MIESAMAVRFPAGANVCSSTAIPYCRSMWSSEDVNGV-HVTSY-RLSHPGGFDVPWNRVR 62

Query: 61  SLNSKSFLERNN-FRKNGIHASAENLGSASDPIKQN-RRQYHPSEELVKSRSENAEDVRP 120
            L   S  +RN   + N I ASAE+LGSASDP KQN R  YHPSEE+ +   EN  D   
Sbjct: 63  RLKGGSMTQRNALIKSNRIRASAEHLGSASDPKKQNGRSHYHPSEEIAEPTLENCGDATL 122

Query: 121 TAAETSRTIVEVS 132
           TAAE +RTI+EV+
Sbjct: 123 TAAEATRTIIEVN 133

[Close]

BLAST of Carg22137 vs. TrEMBL
Match: tr|A0A2N9IDS3|A0A2N9IDS3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50102 PE=4 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 3.9e-24
Identity = 71/133 (53.38%), Postives = 88/133 (66.17%), Query Frame = 0


Query: 1   MIETALAVRFPAGANFCYSSALSHHRSAWTSEDVTNIGHASGFCRLLHSCASDVQWKRCR 60
           MIE+A+AVRFPAGAN C S+A+ + RS W+SEDV  + H + + RL H    DV W R R
Sbjct: 3   MIESAMAVRFPAGANVCSSTAIPYCRSMWSSEDVNGV-HVTSY-RLSHPGGFDVPWNRVR 62

Query: 61  SLNSKSFLERNN-FRKNGIHASAENLGSASDPIKQN-RRQYHPSEELVKSRSENAEDVRP 120
            L   S  +RN   + N I ASAE+LGSASDP KQN R  YHPSEE+ +   EN  D   
Sbjct: 63  RLKGGSMTQRNALIKSNRIRASAEHLGSASDPKKQNGRSHYHPSEEIAEPTLENCGDATL 122

Query: 121 TAAETSRTIVEVS 132
           TAAE +RTI+EV+
Sbjct: 123 TAAEATRTIIEVN 133

The following BLAST results are available for this feature:

BLAST of Carg22137 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023522718.1	1.1e-65	97.71	uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023522719.1	1.1e-65	97.71	uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023541607.1	1.1e-65	97.71	uncharacterized protein At3g49140-like isoform X2 [Cucurbita pepo subsp. pepo]	[more]
XP_023541606.1	1.1e-65	97.71	uncharacterized protein At3g49140-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022945791.1	3.1e-65	96.95	uncharacterized protein At3g49140-like isoform X1 [Cucurbita moschata]	[more]

BLAST of Carg22137 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G49140.1	3.3e-13	38.85	Pentatricopeptide repeat (PPR) superfamily protein	[more]

BLAST of Carg22137 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q0WMN5\|Y3913_ARATH	6.0e-12	38.85	Uncharacterized protein At3g49140 OS=Arabidopsis thaliana OX=3702 GN=At3g49140 P...	[more]

BLAST of Carg22137 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AY35\|A0A1S3AY35_CUCME	1.3e-48	77.27	uncharacterized protein At3g49140-like OS=Cucumis melo OX=3656 GN=LOC103484131 P...	[more]
tr\|A0A0A0L9X9\|A0A0A0L9X9_CUCSA	8.6e-48	77.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G184040 PE=4 SV=1	[more]
tr\|A0A2I4GTT9\|A0A2I4GTT9_9ROSI	7.9e-25	53.03	uncharacterized protein At3g49140-like isoform X1 OS=Juglans regia OX=51240 GN=L...	[more]
tr\|A0A2N9IS07\|A0A2N9IS07_FAGSY	3.9e-24	53.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51808 PE=4 SV=1	[more]
tr\|A0A2N9IDS3\|A0A2N9IDS3_FAGSY	3.9e-24	53.38	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS50102 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22137-RA	Carg22137-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 84..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 96..118
None	No IPR available	PANTHER	PTHR13343	CREG1 PROTEIN	coord: 25..131
None	No IPR available	PANTHER	PTHR13343:SF13	PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN-LIKE PROTEIN	coord: 25..131

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22137	Csa3G184040	Cucumber (Chinese Long) v2	carcuB0754
Carg22137	CSPI03G17360	Wild cucumber (PI 183967)	carcpiB0771

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22137	Silver-seed gourd	carcarB583
Carg22137	Silver-seed gourd	carcarB594
Carg22137	Cucumber (Gy14) v2	carcgybB0733
Carg22137	Cucumber (Gy14) v1	carcgyB0828
Carg22137	Cucurbita maxima (Rimu)	carcmaB1031
Carg22137	Cucurbita maxima (Rimu)	carcmaB1032
Carg22137	Cucurbita moschata (Rifu)	carcmoB1002
Carg22137	Cucurbita moschata (Rifu)	carcmoB1003
Carg22137	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22137	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22137	Cucumber (Chinese Long) v3	carcucB0774
Carg22137	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22137	Melon (DHL92) v3.5.1	carmeB0732
Carg22137	Melon (DHL92) v3.5.1	carmeB0734
Carg22137	Melon (DHL92) v3.6.1	carmedB0743
Carg22137	Melon (DHL92) v3.6.1	carmedB0745
Carg22137	Watermelon (Charleston Gray)	carwcgB0715
Carg22137	Watermelon (97103) v1	carwmB0736
Carg22137	Wax gourd	carwgoB0870
Carg22137	Watermelon (97103) v2	carwmbB0772