Carg22130 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22130
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	protein REVEILLE 6-like isoform X2
Location	Cucurbita_argyrosperma_scaffold_229 : 229269 .. 230055 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTTACCGTTCAACGCTGCTCCGACGTCGTCGAGGGAGGATCTTTCGAAGAGAGCTCGGAAACGCTGTTCTCTCTTCTGTTCGACTGGAGTTTCTTTGAATTTTTGTTAGTAAATAAGAGTTTCTTCGAATTCTCTGTTATTGTTTTTCCTGATTTAAGGCTTCTGGATTCATGAGCGGAGGCATTGCGCTTGTTTTCTCGAAGTGATTTTGGAGTATTTGACTGTTCGTTCAGTTTTACTTACGTTTCTCTTGATTACATGTTTTAGGTTTGATCGAGACTGGAAGAAGATTGAGGCGTTTGTTGGATCCAAGACTGTCATTCAGGTAATGTAAGACACTTGTCTCACGTTCCCCTTTTGTTTGTACGGTCCAAGGAACAAATCTGGGAATGTTTTCAATCTTTTGCTTAACATTCAATCTTTCAATAGTTTTTCTGAGATTTTTATAGATAAGATCTGGAAATTGGAACTTTATTGCATAATTTAGAGTCGAGTTTAATGCTAAATTCATGAAAATTTAATGATTATGAAGTAAATTTGTATATCTTGTTCTGTTTCGTTAAAAACTTGTAGATCTTGAAGAGGCTTGAGTACTTCAAGCTTCGTCTCTCACTGAACATGATGGTTTGTTACAGATACGTAGCCATGCCCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGTGAACACTTGCCTCCTCCTCGACCTAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAATTGGTCAGGACAGCTTCAACCTCTAG

mRNA sequence

ATGGCGTTACCGTTCAACGCTGCTCCGACGTCGTCGAGGGAGGATCTTTCGAAGAGAGCTCGGAAACGCTGTTCTCTCTTCTGTTCGACTGGAGCTTCTGGATTCATGAGCGGAGGCATTGCGCTTGTTTTCTCGAAGTTTGATCGAGACTGGAAGAAGATTGAGGCGTTTGTTGGATCCAAGACTGTCATTCAGATCTTGAAGAGGCTTGAGTACTTCAAGCTTCGTCTCTCACTGAACATGATGATACGTAGCCATGCCCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGTGAACACTTGCCTCCTCCTCGACCTAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAATTGGTCAGGACAGCTTCAACCTCTAG

Coding sequence (CDS)

ATGGCGTTACCGTTCAACGCTGCTCCGACGTCGTCGAGGGAGGATCTTTCGAAGAGAGCTCGGAAACGCTGTTCTCTCTTCTGTTCGACTGGAGCTTCTGGATTCATGAGCGGAGGCATTGCGCTTGTTTTCTCGAAGTTTGATCGAGACTGGAAGAAGATTGAGGCGTTTGTTGGATCCAAGACTGTCATTCAGATCTTGAAGAGGCTTGAGTACTTCAAGCTTCGTCTCTCACTGAACATGATGATACGTAGCCATGCCCAGAAGTACTTCCTGAAGGTTGAGAAGAGTGGGACAGGTGAACACTTGCCTCCTCCTCGACCTAAGAGGAAAGCTGCTCATCCATATCCTCAAAAAGCTTCAAAAATTGGTCAGGACAGCTTCAACCTCTAG

Protein sequence

MALPFNAAPTSSREDLSKRARKRCSLFCSTGASGFMSGGIALVFSKFDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASKIGQDSFNL

Homology

[Close]

BLAST of Carg22130 vs. NCBI nr
Match: XP_022944893.1 (protein REVEILLE 6-like [Cucurbita moschata])

HSP 1 Score: 146.0 bits (367), Expect = 9.1e-32
Identity = 83/124 (66.94%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 1   MALPFNAAPTSSREDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 61  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 107

Query: 121 ASKI 124
           ASKI
Sbjct: 121 ASKI 107

[Close]

BLAST of Carg22130 vs. NCBI nr
Match: XP_023541352.1 (protein REVEILLE 6-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 146.0 bits (367), Expect = 9.1e-32
Identity = 83/124 (66.94%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPFNAAPTSSREDLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 1   MALPFNAAPTSSREDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 61  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 107

Query: 121 ASKI 124
           ASKI
Sbjct: 121 ASKI 107

[Close]

BLAST of Carg22130 vs. NCBI nr
Match: XP_022968540.1 (protein REVEILLE 6-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 82/124 (66.13%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPFNAAPTSS+EDLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 1   MALPFNAAPTSSKEDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 61  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 107

Query: 121 ASKI 124
           ASKI
Sbjct: 121 ASKI 107

[Close]

BLAST of Carg22130 vs. NCBI nr
Match: XP_022968541.1 (protein REVEILLE 6-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 144.8 bits (364), Expect = 2.0e-31
Identity = 82/124 (66.13%), Postives = 86/124 (69.35%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPFNAAPTSS+EDLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 1   MALPFNAAPTSSKEDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 60

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 61  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 107

Query: 121 ASKI 124
           ASKI
Sbjct: 121 ASKI 107

[Close]

BLAST of Carg22130 vs. NCBI nr
Match: XP_008439277.1 (PREDICTED: protein REVEILLE 6-like isoform X2 [Cucumis melo])

HSP 1 Score: 136.3 bits (342), Expect = 7.2e-29
Identity = 78/125 (62.40%), Postives = 83/125 (66.40%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 134

Query: 121 ASKIG 125
           ASK G
Sbjct: 147 ASKNG 134

[Close]

BLAST of Carg22130 vs. TAIR10
Match: AT5G52660.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 114.0 bits (284), Expect = 6.9e-26
Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 10  TSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILK 69
           +SS EDLSK+ RK  ++  S  +         L     FDRDWKKIEAF+GSKTVIQ   
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ--- 111

Query: 70  RLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASK 123
                         IRSHAQKYFLKV+KSGTGEHLPPPRPKRKAAHPYPQKA K
Sbjct: 112 --------------IRSHAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHK 148

[Close]

BLAST of Carg22130 vs. TAIR10
Match: AT1G01520.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 55/83 (66.27%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKI+AFVGSKTVIQ                 IRSHAQKYFLKV+K+GT EHLPPP
Sbjct: 79  FDRDWKKIKAFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTKEHLPPP 138

Query: 107 RPKRKAAHPYPQKASKIGQDSFN 130
           RPKRKA HPYPQKA K    S N
Sbjct: 139 RPKRKANHPYPQKAPKFTLSSSN 144

[Close]

BLAST of Carg22130 vs. TAIR10
Match: AT5G02840.1 (LHY/CCA1-like 1)

HSP 1 Score: 105.1 bits (261), Expect = 3.2e-23
Identity = 55/84 (65.48%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPP
Sbjct: 66  FDRDWKKIEDFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTLAHVPPP 125

Query: 107 RPKRKAAHPYPQKASKIGQDSFNL 131
           RPKRKAAHPYPQKASK  Q S ++
Sbjct: 126 RPKRKAAHPYPQKASKNAQMSLHV 132

[Close]

BLAST of Carg22130 vs. TAIR10
Match: AT3G09600.1 (Homeodomain-like superfamily protein)

HSP 1 Score: 103.2 bits (256), Expect = 1.2e-22
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPP
Sbjct: 61  FDRDWKKIEDFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTLAHVPPP 120

Query: 107 RPKRKAAHPYPQKASKIGQ 126
           RPKRKAAHPYPQKASK  Q
Sbjct: 121 RPKRKAAHPYPQKASKNAQ 122

[Close]

BLAST of Carg22130 vs. TAIR10
Match: AT4G01280.2 (Homeodomain-like superfamily protein)

HSP 1 Score: 102.1 bits (253), Expect = 2.7e-22
Identity = 52/76 (68.42%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIEAFVGSKTV+Q                 IRSHAQKYFLKV+KSG  EHLPPP
Sbjct: 77  FDRDWKKIEAFVGSKTVVQ-----------------IRSHAQKYFLKVQKSGANEHLPPP 135

Query: 107 RPKRKAAHPYPQKASK 123
           RPKRKA+HPYP KA K
Sbjct: 137 RPKRKASHPYPIKAPK 135

[Close]

BLAST of Carg22130 vs. Swiss-Prot
Match: sp|Q8H0W3|RVE6_ARATH (Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.2e-24
Identity = 67/114 (58.77%), Postives = 74/114 (64.91%), Query Frame = 0


Query: 10  TSSREDLSKRARKRCSLFCSTGASGFMSGGIAL-VFSKFDRDWKKIEAFVGSKTVIQILK 69
           +SS EDLSK+ RK  ++  S  +         L     FDRDWKKIEAF+GSKTVIQ   
Sbjct: 52  SSSEEDLSKKIRKPYTITKSRESWTEPEHDKFLEALQLFDRDWKKIEAFIGSKTVIQ--- 111

Query: 70  RLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQKASK 123
                         IRSHAQKYFLKV+KSGTGEHLPPPRPKRKAAHPYPQKA K
Sbjct: 112 --------------IRSHAQKYFLKVQKSGTGEHLPPPRPKRKAAHPYPQKAHK 148

[Close]

BLAST of Carg22130 vs. Swiss-Prot
Match: sp|Q6R0H0|RVE3_ARATH (Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-22
Identity = 55/83 (66.27%), Postives = 58/83 (69.88%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKI+AFVGSKTVIQ                 IRSHAQKYFLKV+K+GT EHLPPP
Sbjct: 79  FDRDWKKIKAFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTKEHLPPP 138

Query: 107 RPKRKAAHPYPQKASKIGQDSFN 130
           RPKRKA HPYPQKA K    S N
Sbjct: 139 RPKRKANHPYPQKAPKFTLSSSN 144

[Close]

BLAST of Carg22130 vs. Swiss-Prot
Match: sp|Q6R0G4|RVE4_ARATH (Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1)

HSP 1 Score: 105.1 bits (261), Expect = 5.8e-22
Identity = 55/84 (65.48%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPP
Sbjct: 66  FDRDWKKIEDFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTLAHVPPP 125

Query: 107 RPKRKAAHPYPQKASKIGQDSFNL 131
           RPKRKAAHPYPQKASK  Q S ++
Sbjct: 126 RPKRKAAHPYPQKASKNAQMSLHV 132

[Close]

BLAST of Carg22130 vs. Swiss-Prot
Match: sp|Q8RWU3|RVE8_ARATH (Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.2e-21
Identity = 54/79 (68.35%), Postives = 57/79 (72.15%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIE FVGSKTVIQ                 IRSHAQKYFLKV+K+GT  H+PPP
Sbjct: 61  FDRDWKKIEDFVGSKTVIQ-----------------IRSHAQKYFLKVQKNGTLAHVPPP 120

Query: 107 RPKRKAAHPYPQKASKIGQ 126
           RPKRKAAHPYPQKASK  Q
Sbjct: 121 RPKRKAAHPYPQKASKNAQ 122

[Close]

BLAST of Carg22130 vs. Swiss-Prot
Match: sp|C0SVG5|RVE5_ARATH (Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.9e-21
Identity = 52/76 (68.42%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 47  FDRDWKKIEAFVGSKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPP 106
           FDRDWKKIEAFVGSKTV+Q                 IRSHAQKYFLKV+KSG  EHLPPP
Sbjct: 77  FDRDWKKIEAFVGSKTVVQ-----------------IRSHAQKYFLKVQKSGANEHLPPP 135

Query: 107 RPKRKAAHPYPQKASK 123
           RPKRKA+HPYP KA K
Sbjct: 137 RPKRKASHPYPIKAPK 135

[Close]

BLAST of Carg22130 vs. TrEMBL
Match: tr|A0A1S3AYG1|A0A1S3AYG1_CUCME (protein REVEILLE 6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29
Identity = 78/125 (62.40%), Postives = 83/125 (66.40%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 134

Query: 121 ASKIG 125
           ASK G
Sbjct: 147 ASKNG 134

[Close]

BLAST of Carg22130 vs. TrEMBL
Match: tr|A0A1S3AZ30|A0A1S3AZ30_CUCME (protein REVEILLE 6-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 136.3 bits (342), Expect = 4.8e-29
Identity = 78/125 (62.40%), Postives = 83/125 (66.40%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 134

Query: 121 ASKIG 125
           ASK G
Sbjct: 147 ASKNG 134

[Close]

BLAST of Carg22130 vs. TrEMBL
Match: tr|A0A1S3AY10|A0A1S3AY10_CUCME (protein REVEILLE 6-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 77/123 (62.60%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 132

Query: 121 ASK 123
           ASK
Sbjct: 147 ASK 132

[Close]

BLAST of Carg22130 vs. TrEMBL
Match: tr|A0A1S3AYE0|A0A1S3AYE0_CUCME (protein REVEILLE 6-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 77/123 (62.60%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 132

Query: 121 ASK 123
           ASK
Sbjct: 147 ASK 132

[Close]

BLAST of Carg22130 vs. TrEMBL
Match: tr|A0A1S3AZ32|A0A1S3AZ32_CUCME (protein REVEILLE 6-like isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-28
Identity = 77/123 (62.60%), Postives = 82/123 (66.67%), Query Frame = 0


Query: 1   MALPFNAAPTSSREDLSKRARKRCSLF-CSTGASGFMSGGIALVFSKFDRDWKKIEAFVG 60
           MALPF +  TSSR+DLSKRARK  ++  C    +             FDRDWKKIEAFVG
Sbjct: 27  MALPFESVTTSSRDDLSKRARKPYTITKCRESWTEPEHDKFLEAIQLFDRDWKKIEAFVG 86

Query: 61  SKTVIQILKRLEYFKLRLSLNMMIRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 120
           SKTVIQ                 IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK
Sbjct: 87  SKTVIQ-----------------IRSHAQKYFLKVEKSGTGEHLPPPRPKRKAAHPYPQK 132

Query: 121 ASK 123
           ASK
Sbjct: 147 ASK 132

The following BLAST results are available for this feature:

BLAST of Carg22130 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944893.1	9.1e-32	66.94	protein REVEILLE 6-like [Cucurbita moschata]	[more]
XP_023541352.1	9.1e-32	66.94	protein REVEILLE 6-like [Cucurbita pepo subsp. pepo]	[more]
XP_022968540.1	2.0e-31	66.13	protein REVEILLE 6-like isoform X1 [Cucurbita maxima]	[more]
XP_022968541.1	2.0e-31	66.13	protein REVEILLE 6-like isoform X2 [Cucurbita maxima]	[more]
XP_008439277.1	7.2e-29	62.40	PREDICTED: protein REVEILLE 6-like isoform X2 [Cucumis melo]	[more]

BLAST of Carg22130 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52660.2	6.9e-26	58.77	Homeodomain-like superfamily protein	[more]
AT1G01520.1	3.2e-23	66.27	Homeodomain-like superfamily protein	[more]
AT5G02840.1	3.2e-23	65.48	LHY/CCA1-like 1	[more]
AT3G09600.1	1.2e-22	68.35	Homeodomain-like superfamily protein	[more]
AT4G01280.2	2.7e-22	68.42	Homeodomain-like superfamily protein	[more]

BLAST of Carg22130 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8H0W3\|RVE6_ARATH	1.2e-24	58.77	Protein REVEILLE 6 OS=Arabidopsis thaliana OX=3702 GN=RVE6 PE=2 SV=1	[more]
sp\|Q6R0H0\|RVE3_ARATH	5.8e-22	66.27	Protein REVEILLE 3 OS=Arabidopsis thaliana OX=3702 GN=RVE3 PE=2 SV=1	[more]
sp\|Q6R0G4\|RVE4_ARATH	5.8e-22	65.48	Protein REVEILLE 4 OS=Arabidopsis thaliana OX=3702 GN=RVE4 PE=1 SV=1	[more]
sp\|Q8RWU3\|RVE8_ARATH	2.2e-21	68.35	Protein REVEILLE 8 OS=Arabidopsis thaliana OX=3702 GN=RVE8 PE=2 SV=1	[more]
sp\|C0SVG5\|RVE5_ARATH	4.9e-21	68.42	Protein REVEILLE 5 OS=Arabidopsis thaliana OX=3702 GN=RVE5 PE=2 SV=1	[more]

BLAST of Carg22130 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AYG1\|A0A1S3AYG1_CUCME	4.8e-29	62.40	protein REVEILLE 6-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
tr\|A0A1S3AZ30\|A0A1S3AZ30_CUCME	4.8e-29	62.40	protein REVEILLE 6-like isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
tr\|A0A1S3AY10\|A0A1S3AY10_CUCME	1.4e-28	62.60	protein REVEILLE 6-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
tr\|A0A1S3AYE0\|A0A1S3AYE0_CUCME	1.4e-28	62.60	protein REVEILLE 6-like isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]
tr\|A0A1S3AZ32\|A0A1S3AZ32_CUCME	1.4e-28	62.60	protein REVEILLE 6-like isoform X5 OS=Cucumis melo OX=3656 GN=LOC103484108 PE=4 ...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22130-RA	Carg22130-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:1.10.10.60		coord: 40..76 e-value: 3.9E-5 score: 25.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 97..130
None	No IPR available	PANTHER	PTHR12802:SF83	SUBFAMILY NOT NAMED	coord: 81..123
None	No IPR available	PANTHER	PTHR12802:SF83	SUBFAMILY NOT NAMED	coord: 6..69
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 6..69
None	No IPR available	PANTHER	PTHR12802	SWI/SNF COMPLEX-RELATED	coord: 81..123

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22130	Silver-seed gourd	carcarB583
Carg22130	Silver-seed gourd	carcarB594
Carg22130	Cucumber (Gy14) v2	carcgybB0733
Carg22130	Cucumber (Gy14) v1	carcgyB0828
Carg22130	Cucurbita maxima (Rimu)	carcmaB1031
Carg22130	Cucurbita maxima (Rimu)	carcmaB1032
Carg22130	Cucurbita moschata (Rifu)	carcmoB1002
Carg22130	Cucurbita moschata (Rifu)	carcmoB1003
Carg22130	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22130	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22130	Wild cucumber (PI 183967)	carcpiB0771
Carg22130	Cucumber (Chinese Long) v2	carcuB0754
Carg22130	Cucumber (Chinese Long) v3	carcucB0774
Carg22130	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22130	Melon (DHL92) v3.5.1	carmeB0732
Carg22130	Melon (DHL92) v3.5.1	carmeB0733
Carg22130	Melon (DHL92) v3.6.1	carmedB0743
Carg22130	Melon (DHL92) v3.6.1	carmedB0744
Carg22130	Watermelon (Charleston Gray)	carwcgB0715
Carg22130	Watermelon (97103) v1	carwmB0736
Carg22130	Wax gourd	carwgoB0869
Carg22130	Watermelon (97103) v2	carwmbB0772