Carg22125 (gene) Silver-seed gourd

Overview
NameCarg22125
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionconserved peptide upstream open reading frame 14
LocationCucurbita_argyrosperma_scaffold_229 : 208463 .. 208754 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
TTATTGACCAGTTTATTCTCTTCAATCCACAGCCATCAGGAAGAGGCTCATGTGAGTTGCTTGCAATTAGACAGCTTTGTATTTGTTGCTTCGGTTGGAATATTGCACACTCTTTGGTTCATTTGATATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATTCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGGTATTCCTACAGACCTGAGTGGGTG

mRNA sequence

TTATTGACCAGTTTATTCTCTTCAATCCACAGCCATCAGGAAGAGGCTCATACAGCTTTGTATTTGTTGCTTCGGTTGGAATATTGCACACTCTTTGGTTCATTTGATATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATTCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGGTATTCCTACAGACCTGAGTGGGTG

Coding sequence (CDS)

TTATTGACCAGTTTATTCTCTTCAATCCACAGCCATCAGGAAGAGGCTCATACAGCTTTGTATTTGTTGCTTCGGTTGGAATATTGCACACTCTTTGGTTCATTTGATATGAACAAAATGGGTAAGTGGAAAGGTTGTGGAAAACTAGGACGACTGGTGCCAAGAGGTGGTTCTATGACTTCTTACAAATATTCTCTTTTGTTGTCACCTGTTGTCTCTGTCTGGGATTGCATTGTCAGGAAAATGAGGTATTCCTACAGACCTGAGTGGGTG

Protein sequence

LLTSLFSSIHSHQEEAHTALYLLLRLEYCTLFGSFDMNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV
Homology
[Close]
BLAST of Carg22125 vs. NCBI nr
Match: XP_008439287.1 (PREDICTED: uncharacterized protein LOC103484116 [Cucumis melo] >XP_011651179.1 PREDICTED: uncharacterized protein LOC101212865 isoform X2 [Cucumis sativus] >XP_016899083.1 PREDICTED: uncharacterized protein LOC103484116 [Cucumis melo])

HSP 1 Score: 112.8 bits (281), Expect = 6.0e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0 

Query: 37 MNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          M+KM KWKG GKLGRLVPRGGSMTSYKY+LLLSPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 1  MHKMDKWKGSGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMRYSYRPEWV 55

[Close]
BLAST of Carg22125 vs. NCBI nr
Match: XP_016650179.1 (PREDICTED: uncharacterized protein LOC103333726 isoform X2 [Prunus mume] >XP_016650180.1 PREDICTED: uncharacterized protein LOC103333726 isoform X2 [Prunus mume])

HSP 1 Score: 108.2 bits (269), Expect = 1.5e-20
Identity = 47/61 (77.05%), Postives = 56/61 (91.80%), Query Frame = 0 

Query: 31 LFGSFDMNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEW 90
          +  SF M +MGK KGCGKLGR++PRGGS+++Y++SLLLSPVVSVWDCIVRKMRYSYRPEW
Sbjct: 1  MISSFSMLQMGKCKGCGKLGRMMPRGGSVSAYQFSLLLSPVVSVWDCIVRKMRYSYRPEW 60

Query: 91 V 92
          V
Sbjct: 61 V 61

[Close]
BLAST of Carg22125 vs. NCBI nr
Match: XP_008380093.1 (PREDICTED: uncharacterized protein LOC103443071 isoform X2 [Malus domestica])

HSP 1 Score: 104.8 bits (260), Expect = 1.6e-19
Identity = 46/55 (83.64%), Postives = 53/55 (96.36%), Query Frame = 0 

Query: 37 MNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          M KMGK KGCGKLGR++PRGGS+++Y++SLLLSPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 1  MLKMGKCKGCGKLGRMMPRGGSVSAYQFSLLLSPVVSVWDCIVRKMRYSYRPEWV 55

[Close]
BLAST of Carg22125 vs. NCBI nr
Match: ONI25398.1 (hypothetical protein PRUPE_2G300500 [Prunus persica])

HSP 1 Score: 101.7 bits (252), Expect = 1.4e-18
Identity = 44/52 (84.62%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 40 MGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          MGK KGCGKLGR++PRGGS+++Y++SLLLSPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 1  MGKCKGCGKLGRMMPRGGSVSAYQFSLLLSPVVSVWDCIVRKMRYSYRPEWV 52

[Close]
BLAST of Carg22125 vs. NCBI nr
Match: XP_008376633.1 (PREDICTED: uncharacterized protein LOC103439796 isoform X2 [Malus domestica] >XP_017188905.1 PREDICTED: uncharacterized protein LOC103439796 isoform X2 [Malus domestica])

HSP 1 Score: 99.8 bits (247), Expect = 5.2e-18
Identity = 43/61 (70.49%), Postives = 53/61 (86.89%), Query Frame = 0 

Query: 31 LFGSFDMNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEW 90
          +  S  M KMG+ KGCGKLGR++PRGGS+++Y++SL LSPVVSVWDCI+RKMRYSY PEW
Sbjct: 1  MISSSGMLKMGECKGCGKLGRMMPRGGSVSAYRFSLRLSPVVSVWDCIIRKMRYSYGPEW 60

Query: 91 V 92
          V
Sbjct: 61 V 61

[Close]
BLAST of Carg22125 vs. TAIR10
Match: AT5G52552.1 (conserved peptide upstream open reading frame 14)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-16
Identity = 37/52 (71.15%), Postives = 42/52 (80.77%), Query Frame = 0 

Query: 40 MGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          MG+ KGC KLGR++ +  S  SY  SLLLSPVVSVWDCIVRKMRY+Y PEWV
Sbjct: 1  MGEVKGCWKLGRMLSKDNSANSYNVSLLLSPVVSVWDCIVRKMRYTYIPEWV 52

[Close]
BLAST of Carg22125 vs. TAIR10
Match: AT4G25672.1 (conserved peptide upstream open reading frame 12)

HSP 1 Score: 76.3 bits (186), Expect = 1.1e-14
Identity = 34/52 (65.38%), Postives = 39/52 (75.00%), Query Frame = 0 

Query: 40 MGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          MG+ KGCG +GR++ +  S  SY  SL LSPVVS WDCIVR MRYSY PEWV
Sbjct: 1  MGESKGCGNVGRMISKNKSANSYNLSLQLSPVVSFWDCIVRTMRYSYIPEWV 52

[Close]
BLAST of Carg22125 vs. TAIR10
Match: AT4G25692.1 (conserved peptide upstream open reading frame 13)

HSP 1 Score: 68.2 bits (165), Expect = 3.1e-12
Identity = 33/55 (60.00%), Postives = 37/55 (67.27%), Query Frame = 0 

Query: 37 MNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          M KMG+  GCGK G ++P   S  SY  SL LS V SVWDC VR MRYSY PEW+
Sbjct: 1  MQKMGESTGCGKGGLMIPNHKSANSYNLSLELSLVDSVWDCNVRTMRYSYIPEWL 55

[Close]
BLAST of Carg22125 vs. TrEMBL
Match: tr|A0A1S3AY20|A0A1S3AY20_CUCME (uncharacterized protein LOC103484116 OS=Cucumis melo OX=3656 GN=LOC103484116 PE=4 SV=1)

HSP 1 Score: 112.8 bits (281), Expect = 3.9e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 0 

Query: 37 MNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          M+KM KWKG GKLGRLVPRGGSMTSYKY+LLLSPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 1  MHKMDKWKGSGKLGRLVPRGGSMTSYKYALLLSPVVSVWDCIVRKMRYSYRPEWV 55

[Close]
BLAST of Carg22125 vs. TrEMBL
Match: tr|A0A251QNM1|A0A251QNM1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G300500 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 9.1e-19
Identity = 44/52 (84.62%), Postives = 51/52 (98.08%), Query Frame = 0 

Query: 40 MGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          MGK KGCGKLGR++PRGGS+++Y++SLLLSPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 1  MGKCKGCGKLGRMMPRGGSVSAYQFSLLLSPVVSVWDCIVRKMRYSYRPEWV 52

[Close]
BLAST of Carg22125 vs. TrEMBL
Match: tr|A0A251N5X6|A0A251N5X6_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G027400 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 41/51 (80.39%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 40 MGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEW 91
          MGK KGCGKLGR++PRGGS+++Y++SL+LSPVV VWDCIVRKMRYSYRPEW
Sbjct: 1  MGKCKGCGKLGRMMPRGGSVSAYQFSLMLSPVVFVWDCIVRKMRYSYRPEW 51

[Close]
BLAST of Carg22125 vs. TrEMBL
Match: tr|A0A2P4H4I9|A0A2P4H4I9_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49401 PE=4 SV=1)

HSP 1 Score: 97.4 bits (241), Expect = 1.7e-17
Identity = 42/55 (76.36%), Postives = 51/55 (92.73%), Query Frame = 0 

Query: 37 MNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
          + +MGK KGCGKLGR+VPRGGS+++Y  +LLLSPVVSVW+CIVRKMRYS+RPEWV
Sbjct: 35 VQRMGKCKGCGKLGRMVPRGGSVSAYDSALLLSPVVSVWECIVRKMRYSFRPEWV 89

[Close]
BLAST of Carg22125 vs. TrEMBL
Match: tr|A0A0B0MUF7|A0A0B0MUF7_GOSAR (Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_25398 PE=4 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.8e-17
Identity = 43/59 (72.88%), Postives = 48/59 (81.36%), Query Frame = 0 

Query: 33  GSFDMNKMGKWKGCGKLGRLVPRGGSMTSYKYSLLLSPVVSVWDCIVRKMRYSYRPEWV 92
           G   + KMGK KGCGKLGR++PR G + +Y  SLL SPVVSVWDCIVRKMRYSYRPEWV
Sbjct: 75  GPVSVQKMGKCKGCGKLGRMLPRDGPVNAYYSSLLCSPVVSVWDCIVRKMRYSYRPEWV 133

The following BLAST results are available for this feature:
BLAST of Carg22125 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_008439287.16.0e-2292.73PREDICTED: uncharacterized protein LOC103484116 [Cucumis melo] >XP_011651179.1 P... [more]
XP_016650179.11.5e-2077.05PREDICTED: uncharacterized protein LOC103333726 isoform X2 [Prunus mume] >XP_016... [more]
XP_008380093.11.6e-1983.64PREDICTED: uncharacterized protein LOC103443071 isoform X2 [Malus domestica][more]
ONI25398.11.4e-1884.62hypothetical protein PRUPE_2G300500 [Prunus persica][more]
XP_008376633.15.2e-1870.49PREDICTED: uncharacterized protein LOC103439796 isoform X2 [Malus domestica] >XP... [more]
BLAST of Carg22125 vs. TAIR10
Match NameE-valueIdentityDescription
AT5G52552.13.5e-1671.15conserved peptide upstream open reading frame 14[more]
AT4G25672.11.1e-1465.38conserved peptide upstream open reading frame 12[more]
AT4G25692.13.1e-1260.00conserved peptide upstream open reading frame 13[more]
BLAST of Carg22125 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg22125 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AY20|A0A1S3AY20_CUCME3.9e-2292.73uncharacterized protein LOC103484116 OS=Cucumis melo OX=3656 GN=LOC103484116 PE=... [more]
tr|A0A251QNM1|A0A251QNM1_PRUPE9.1e-1984.62Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G300500 PE=4 SV=1[more]
tr|A0A251N5X6|A0A251N5X6_PRUPE1.7e-1780.39Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G027400 PE=4 SV=1[more]
tr|A0A2P4H4I9|A0A2P4H4I9_QUESU1.7e-1776.36Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_49401 PE=4 SV=1[more]
tr|A0A0B0MUF7|A0A0B0MUF7_GOSAR3.8e-1772.88Uncharacterized protein OS=Gossypium arboreum OX=29729 GN=F383_25398 PE=4 SV=1[more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22125-RACarg22125-RAmRNA