Carg22108 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTTGGTTCGGATAGAGAGATAAGTAAAAAAGACTCCCTTTTCTTCCGCCCCTTTATCCACCAAAATCCCTACGCCTTTTTCTCATTCAATTCCTTCTTTTTTTACAAATTCAAGCTTGAATTTTCTTCCTCAATCCAATCTTCCCCAATTTACAGTAAATTACTCAATCTCCGTTTGGAGTAGGCTTTTTCATGGCTTCCACTCCTTCCACATGTTCGCCCAACTCTCTCCAGCTTCGTCTCGCTCTCAATTGCAAGAATTCCCCCAAATTCCCTTTCCTTCCTGTTCGCGCCACAGTGCGGAAGTTGGATCCTCGCCTCCGGGTGATTTTCCGCCCTATTGTTCATAATAGCGCGAAAATCGCGCGAACAAATGGACTGCGTCGGAATGGAATTTGTTTTGCTGGATCGGATTCCAAGGCTGATGGATTCTCCGGGTGGTCGGAATCGGATTCCGGCGAGGAGGATTTGAACTTGCGGACAAAGAATTGGTTGGCAGGTACTAATTATCTTGGTTTTCCCCCCAAATTTTAATTACTGGGCTGCAATTTCTTGATGTTAATGTGGTCCTTTTGTTGTTTTGGTGTTTAGGGCCAACAATTTAAACATTTTCGTTTTGAAATTTTGATTAATGGTCTTGAAGTAGTTTCTTTCAGGGTTGGTGGGGATTGGAATTACTGGATTCATCCTTGTCTCTGGAATCACCTTTGCAGCATGGTCGATAAACAAGCAGAATTGTTCCAGTGAGTTGTTTTCTTCAAGAATGCTTTTCTTTTTTGTTTCTTTTTGA CTTCTTGGTTCGGATAGAGAGATAAGTAAAAAAGACTCCCTTTTCTTCCGCCCCTTTATCCACCAAAATCCCTACGCCTTTTTCTCATTCAATTCCTTCTTTTTTTACAAATTCAAGCTTGAATTTTCTTCCTCAATCCAATCTTCCCCAATTTACAGTAAATTACTCAATCTCCGTTTGGAGTAGGCTTTTTCATGGCTTCCACTCCTTCCACATGTTCGCCCAACTCTCTCCAGCTTCGTCTCGCTCTCAATTGCAAGAATTCCCCCAAATTCCCTTTCCTTCCTGTTCGCGCCACAGTGCGGAAGTTGGATCCTCGCCTCCGGGTGATTTTCCGCCCTATTGTTCATAATAGCGCGAAAATCGCGCGAACAAATGGACTGCGTCGGAATGGAATTTGTTTTGCTGGATCGGATTCCAAGGCTGATGGATTCTCCGGGTGGTCGGAATCGGATTCCGGCGAGGAGGATTTGAACTTGCGGACAAAGAATTGGTTGGCAGGGTTGGTGGGGATTGGAATTACTGGATTCATCCTTGTCTCTGGAATCACCTTTGCAGCATGGTCGATAAACAAGCAGAATTGTTCCAGTGAGTTGTTTTCTTCAAGAATGCTTTTCTTTTTTGTTTCTTTTTGA ATGGCTTCCACTCCTTCCACATGTTCGCCCAACTCTCTCCAGCTTCGTCTCGCTCTCAATTGCAAGAATTCCCCCAAATTCCCTTTCCTTCCTGTTCGCGCCACAGTGCGGAAGTTGGATCCTCGCCTCCGGGTGATTTTCCGCCCTATTGTTCATAATAGCGCGAAAATCGCGCGAACAAATGGACTGCGTCGGAATGGAATTTGTTTTGCTGGATCGGATTCCAAGGCTGATGGATTCTCCGGGTGGTCGGAATCGGATTCCGGCGAGGAGGATTTGAACTTGCGGACAAAGAATTGGTTGGCAGGGTTGGTGGGGATTGGAATTACTGGATTCATCCTTGTCTCTGGAATCACCTTTGCAGCATGGTCGATAAACAAGCAGAATTGTTCCAGTGAGTTGTTTTCTTCAAGAATGCTTTTCTTTTTTGTTTCTTTTTGA MASTPSTCSPNSLQLRLALNCKNSPKFPFLPVRATVRKLDPRLRVIFRPIVHNSAKIARTNGLRRNGICFAGSDSKADGFSGWSESDSGEEDLNLRTKNWLAGLVGIGITGFILVSGITFAAWSINKQNCSSELFSSRMLFFFVSF
BLAST of Carg22108 vs. NCBI nr
Match: XP_022945850.1 (uncharacterized protein LOC111449970 isoform X1 [Cucurbita moschata]) HSP 1 Score: 261.2 bits (666), Expect = 2.2e-66 Identity = 129/133 (96.99%), Postives = 131/133 (98.50%), Query Frame = 0
BLAST of Carg22108 vs. NCBI nr
Match: XP_023541683.1 (uncharacterized protein LOC111801768 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 256.9 bits (655), Expect = 4.1e-65 Identity = 128/133 (96.24%), Postives = 129/133 (96.99%), Query Frame = 0
BLAST of Carg22108 vs. NCBI nr
Match: XP_022968011.1 (uncharacterized protein LOC111467385 isoform X1 [Cucurbita maxima]) HSP 1 Score: 249.6 bits (636), Expect = 6.5e-63 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Carg22108 vs. NCBI nr
Match: XP_022968012.1 (uncharacterized protein LOC111467385 isoform X2 [Cucurbita maxima]) HSP 1 Score: 249.6 bits (636), Expect = 6.5e-63 Identity = 124/133 (93.23%), Postives = 127/133 (95.49%), Query Frame = 0
BLAST of Carg22108 vs. NCBI nr
Match: XP_008439251.1 (PREDICTED: uncharacterized protein LOC103484091 isoform X1 [Cucumis melo]) HSP 1 Score: 194.9 bits (494), Expect = 1.9e-46 Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 0
BLAST of Carg22108 vs. TAIR10
Match: AT5G23890.1 (LOCATED IN: mitochondrion, chloroplast thylakoid membrane, chloroplast, plastid, chloroplast envelope) HSP 1 Score: 56.2 bits (134), Expect = 1.9e-08 Identity = 47/147 (31.97%), Postives = 75/147 (51.02%), Query Frame = 0
BLAST of Carg22108 vs. TrEMBL
Match: tr|A0A1S3AXY7|A0A1S3AXY7_CUCME (uncharacterized protein LOC103484091 isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484091 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 0
BLAST of Carg22108 vs. TrEMBL
Match: tr|A0A1S3AYZ8|A0A1S3AYZ8_CUCME (uncharacterized protein LOC103484091 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484091 PE=4 SV=1) HSP 1 Score: 194.9 bits (494), Expect = 1.3e-46 Identity = 99/133 (74.44%), Postives = 108/133 (81.20%), Query Frame = 0
BLAST of Carg22108 vs. TrEMBL
Match: tr|A0A0A0L9T9|A0A0A0L9T9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182230 PE=4 SV=1) HSP 1 Score: 189.9 bits (481), Expect = 4.1e-45 Identity = 98/133 (73.68%), Postives = 102/133 (76.69%), Query Frame = 0
BLAST of Carg22108 vs. TrEMBL
Match: tr|A0A1Q3CGV2|A0A1Q3CGV2_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_22768 PE=4 SV=1) HSP 1 Score: 120.2 bits (300), Expect = 4.0e-24 Identity = 62/134 (46.27%), Postives = 89/134 (66.42%), Query Frame = 0
BLAST of Carg22108 vs. TrEMBL
Match: tr|A0A2N9EEN1|A0A2N9EEN1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1012 PE=4 SV=1) HSP 1 Score: 104.4 bits (259), Expect = 2.2e-19 Identity = 65/134 (48.51%), Postives = 85/134 (63.43%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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