Carg22098 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22098
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Vesicle transport protein
Location	Cucurbita_argyrosperma_scaffold_229 : 91018 .. 91660 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGAGTGCCACTTGCACAAGGCATTAGGTATGTCAATGAAGAGAATGACGATGTTTTGGGGTACAAACAGCAAGCTGAGTTCATACTCAAACAGATCTCTAGAGGGGCTTTGTCACCTCCAAAAATGGTCATTCAAATGCATCATCACTCTTTCATGTACCGTTCTAACTCTCTTTTCTTTACGTTGATTTCGACATATCGGATTCAAATATCCTTCTAAGCTCAATTCAATCTCGATCGAGTTTAAATTTTCTCAACCCCATCTTAAAATATTGGGTTGGGTCGGGTTGTATCAACTCAACTCATAATTTTTCTTTTTTTTTTTTTGTGTTACATCAATTAGTTACTTGATCGAGAACGGAGTGTGTTACATGACGTTATGCGATTCTTTATACCCAAGAAAGCTGGCTATCCATTACTTGCAAGATCTGCAAAGGGAGTTTTCCAAGTTTGATGATGCCCTACTAAACAGCCTTATCAAACCCTATAGTTTCCCCAAATTTGGTAACCTTTCTCAACCCTCTTCATCCATGCCTGCCCGACTTAGGGCAAAAATAAAAGAATATATGTCTTATTCTCGCTCGTGTCCCTACTTTACCTCCTTCTAA

mRNA sequence

ATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGAGTGCCACTTGCACAAGGCATTAGGTATGTCAATGAAGAGAATGACGATGTTTTGGGGTACAAACAGCAAGCTGAGTTCATACTCAAACAGATCTCTAGAGGGGCTTTGTCACCTCCAAAAATGGTCATTCAAATGCATCATCACTCTTTCATGTACCGTTCTAACTCTCTTTTCTTTACTTACTTGATCGAGAACGGAGTGTGTTACATGACGTTATGCGATTCTTTATACCCAAGAAAGCTGGCTATCCATTACTTGCAAGATCTGCAAAGGGAGTTTTCCAAGTTTGATGATGCCCTACTAAACAGCCTTATCAAACCCTATAGTTTCCCCAAATTTGGTAACCTTTCTCAACCCTCTTCATCCATGCCTGCCCGACTTAGGGCAAAAATAAAAGAATATATGTCTTATTCTCGCTCGTGTCCCTACTTTACCTCCTTCTAA

Coding sequence (CDS)

ATGGTGAAGCTGACAATGGTGGGAAGGGTTAGGGATGGAGTGCCACTTGCACAAGGCATTAGGTATGTCAATGAAGAGAATGACGATGTTTTGGGGTACAAACAGCAAGCTGAGTTCATACTCAAACAGATCTCTAGAGGGGCTTTGTCACCTCCAAAAATGGTCATTCAAATGCATCATCACTCTTTCATGTACCGTTCTAACTCTCTTTTCTTTACTTACTTGATCGAGAACGGAGTGTGTTACATGACGTTATGCGATTCTTTATACCCAAGAAAGCTGGCTATCCATTACTTGCAAGATCTGCAAAGGGAGTTTTCCAAGTTTGATGATGCCCTACTAAACAGCCTTATCAAACCCTATAGTTTCCCCAAATTTGGTAACCTTTCTCAACCCTCTTCATCCATGCCTGCCCGACTTAGGGCAAAAATAAAAGAATATATGTCTTATTCTCGCTCGTGTCCCTACTTTACCTCCTTCTAA

Protein sequence

MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHHHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKPYSFPKFGNLSQPSSSMPARLRAKIKEYMSYSRSCPYFTSF

Homology

[Close]

BLAST of Carg22098 vs. NCBI nr
Match: XP_022944814.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHH
Sbjct: 44  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHH 103

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSL+KP
Sbjct: 104 HSFI---------YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKP 163

Query: 121 YSFPKFGNL 130
           YSF KF N+
Sbjct: 164 YSFLKFDNI 163

[Close]

BLAST of Carg22098 vs. NCBI nr
Match: XP_022944815.1 (25.3 kDa vesicle transport protein isoform X2 [Cucurbita moschata])

HSP 1 Score: 228.8 bits (582), Expect = 1.3e-56
Identity = 114/129 (88.37%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALSPPKMVIQMHH
Sbjct: 44  MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSPPKMVIQMHH 103

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSL+KP
Sbjct: 104 HSFI---------YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKP 163

Query: 121 YSFPKFGNL 130
           YSF KF N+
Sbjct: 164 YSFLKFDNI 163

[Close]

BLAST of Carg22098 vs. NCBI nr
Match: XP_022968543.1 (25.3 kDa vesicle transport protein isoform X2 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 113/129 (87.60%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHH
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSL+KP
Sbjct: 61  HSFI---------YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKP 120

Query: 121 YSFPKFGNL 130
           YSFPKF N+
Sbjct: 121 YSFPKFDNI 120

[Close]

BLAST of Carg22098 vs. NCBI nr
Match: XP_022968542.1 (25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima])

HSP 1 Score: 228.0 bits (580), Expect = 2.2e-56
Identity = 113/129 (87.60%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILK+ISRGALS PKM IQMHH
Sbjct: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKEISRGALSSPKMAIQMHH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSL+KP
Sbjct: 61  HSFI---------YLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKP 120

Query: 121 YSFPKFGNL 130
           YSFPKF N+
Sbjct: 121 YSFPKFDNI 120

[Close]

BLAST of Carg22098 vs. NCBI nr
Match: XP_023541413.1 (25.3 kDa vesicle transport protein [Cucurbita pepo subsp. pepo])

HSP 1 Score: 224.6 bits (571), Expect = 2.5e-55
Identity = 111/129 (86.05%), Postives = 116/129 (89.92%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDGVPLAQGIRYVNEE DDVLGYKQQAEFILKQISRGALS PKM IQMHH
Sbjct: 13  MVKLTMVGRVRDGVPLAQGIRYVNEETDDVLGYKQQAEFILKQISRGALSSPKMAIQMHH 72

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YL+ENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSL+KP
Sbjct: 73  HSFI---------YLMENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLVKP 132

Query: 121 YSFPKFGNL 130
           YS+PKF N+
Sbjct: 133 YSYPKFDNI 132

[Close]

BLAST of Carg22098 vs. TAIR10
Match: AT5G52270.1 (SNARE-like superfamily protein)

HSP 1 Score: 130.2 bits (326), Expect = 1.1e-30
Identity = 69/131 (52.67%), Postives = 89/131 (67.94%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKQISRGALSPPKMVIQMH 60
           MVKLT+VGRV DG+PLAQ   YVN E+N   L YKQQAEF+LKQ+S+ +L  PKM I + 
Sbjct: 1   MVKLTIVGRVEDGLPLAQDQTYVNQEDNTSFLLYKQQAEFLLKQVSKDSLLHPKMTILLD 60

Query: 61  HHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDD-ALLNSLI 120
           HHS         F +L+E  +CY+ L DS YPRKL  +YLQ+L +E  K D+ AL+  + 
Sbjct: 61  HHS---------FHFLVEKKICYIALSDSSYPRKLLFNYLQNLNKELDKLDEKALIQKIS 120

Query: 121 KPYSFPKFGNL 130
           KPYSF +FG +
Sbjct: 121 KPYSFIRFGKI 122

[Close]

BLAST of Carg22098 vs. TAIR10
Match: AT1G11890.1 (Synaptobrevin family protein)

HSP 1 Score: 96.7 bits (239), Expect = 1.4e-20
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++   
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 +    F Y+IE  VCY+T+CD  YP+KLA  YL+DL+ EF + +   + +  +P
Sbjct: 61  ------TGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARP 120

Query: 121 YSFPKFGNLSQPSSSM 137
           Y+F KF    Q +  +
Sbjct: 121 YAFIKFDTFIQKTKKL 126

[Close]

BLAST of Carg22098 vs. Swiss-Prot
Match: sp|Q94AU2|SEC22_ARATH (25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2 SV=1)

HSP 1 Score: 96.7 bits (239), Expect = 2.5e-19
Identity = 49/136 (36.03%), Postives = 78/136 (57.35%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVK+T++ RV DG+PLA+G+    +  D  + YKQQ + + K +SRG     +M ++   
Sbjct: 1   MVKMTLIARVTDGLPLAEGLDDGRDLPDSDM-YKQQVKALFKNLSRGQNDASRMSVE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 +    F Y+IE  VCY+T+CD  YP+KLA  YL+DL+ EF + +   + +  +P
Sbjct: 61  ------TGPYVFHYIIEGRVCYLTMCDRSYPKKLAFQYLEDLKNEFERVNGPNIETAARP 120

Query: 121 YSFPKFGNLSQPSSSM 137
           Y+F KF    Q +  +
Sbjct: 121 YAFIKFDTFIQKTKKL 126

[Close]

BLAST of Carg22098 vs. Swiss-Prot
Match: sp|Q5ZJW4|SC22B_CHICK (Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1)

HSP 1 Score: 88.2 bits (217), Expect = 9.0e-17
Identity = 47/143 (32.87%), Postives = 82/143 (57.34%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++   
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+DLQ EF +     + ++ +P
Sbjct: 61  ------AGAMAFHYIIEKGVCYLVLCEAAFPKKLAFAYLEDLQSEFDEQHGKKVPTVSRP 120

Query: 121 YSFPKFGNLSQPSSSMPARLRAK 144
           YSF +F    Q +  +    RA+
Sbjct: 121 YSFIEFDTYIQKTKKLYIDSRAR 132

[Close]

BLAST of Carg22098 vs. Swiss-Prot
Match: sp|Q6P7L4|SC22B_XENTR (Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis OX=8364 GN=sec22b PE=2 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.0e-16
Identity = 48/143 (33.57%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++   
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQNQAKQLFRKLNE--QSPTRCTLE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 + ++ F YLIE GVCY+ LC++ +P+KLA  YL+DL  EF +     + ++ +P
Sbjct: 61  ------AGAMTFHYLIEKGVCYLVLCEAAFPKKLAFAYLEDLFSEFDEQHGKKVPTVSRP 120

Query: 121 YSFPKFGNLSQPSSSMPARLRAK 144
           YSF +F N  Q +       RA+
Sbjct: 121 YSFIEFDNYIQKTKKSYIDSRAR 132

[Close]

BLAST of Carg22098 vs. Swiss-Prot
Match: sp|O08547|SC22B_MOUSE (Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 46/143 (32.17%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++   
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+DL  EF +     + ++ +P
Sbjct: 61  ------AGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRP 120

Query: 121 YSFPKFGNLSQPSSSMPARLRAK 144
           YSF +F    Q +  +    RA+
Sbjct: 121 YSFIEFDTFIQKTKKLYIDSRAR 132

[Close]

BLAST of Carg22098 vs. Swiss-Prot
Match: sp|Q5RAI9|SC22B_PONAB (Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3)

HSP 1 Score: 86.7 bits (213), Expect = 2.6e-16
Identity = 46/143 (32.17%), Postives = 81/143 (56.64%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MV LTM+ RV DG+PLA  ++   +   D+  Y+ QA+ + ++++    SP +  ++   
Sbjct: 1   MVLLTMIARVADGLPLAASMQEDEQSGRDLQQYQSQAKQLFRKLNE--QSPTRCTLE--- 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
                 + ++ F Y+IE GVCY+ LC++ +P+KLA  YL+DL  EF +     + ++ +P
Sbjct: 61  ------AGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGKKVPTVSRP 120

Query: 121 YSFPKFGNLSQPSSSMPARLRAK 144
           YSF +F    Q +  +    RA+
Sbjct: 121 YSFIEFDTFIQKTKKLYIDSRAR 132

[Close]

BLAST of Carg22098 vs. TrEMBL
Match: tr|A0A0A0LBE2|A0A0A0LBE2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3 SV=1)

HSP 1 Score: 210.3 bits (534), Expect = 3.2e-51
Identity = 102/129 (79.07%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILK+ISRG LSPPKMVI MHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YL+ENGVCYMTLCDS YPRKLAIHYLQDLQ+EF KFDDAL+N LIKP
Sbjct: 61  HSFI---------YLVENGVCYMTLCDSSYPRKLAIHYLQDLQKEFGKFDDALINKLIKP 120

Query: 121 YSFPKFGNL 130
           YSF KF ++
Sbjct: 121 YSFLKFDSI 120

[Close]

BLAST of Carg22098 vs. TrEMBL
Match: tr|A0A1S3AYX3|A0A1S3AYX3_CUCME (25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 209.5 bits (532), Expect = 5.4e-51
Identity = 101/129 (78.29%), Postives = 112/129 (86.82%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILK+ISRG LSPPKMVI MHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N LIKP
Sbjct: 61  HSFI---------YLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKP 120

Query: 121 YSFPKFGNL 130
           YSF KF ++
Sbjct: 121 YSFLKFDSI 120

[Close]

BLAST of Carg22098 vs. TrEMBL
Match: tr|A0A1S4DTG2|A0A1S4DTG2_CUCME (25.3 kDa vesicle transport protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484073 PE=3 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 9.3e-51
Identity = 101/126 (80.16%), Postives = 110/126 (87.30%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLTMVGRVRDG+P+AQGIRYVNEENDDV GYK+QAEFILK+ISRG LSPPKMVI MHH
Sbjct: 1   MVKLTMVGRVRDGLPIAQGIRYVNEENDDVFGYKKQAEFILKEISRGTLSPPKMVILMHH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HSF+         YL+ENGVCYMTLCDS YPRKLA+HYLQDLQ+EF KFDDAL+N LIKP
Sbjct: 61  HSFI---------YLVENGVCYMTLCDSSYPRKLALHYLQDLQKEFGKFDDALINKLIKP 117

Query: 121 YSFPKF 127
           YSF KF
Sbjct: 121 YSFLKF 117

[Close]

BLAST of Carg22098 vs. TrEMBL
Match: tr|A0A061G838|A0A061G838_THECC (SNARE superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_015158 PE=3 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.9e-38
Identity = 79/129 (61.24%), Postives = 97/129 (75.19%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVNEENDDVLGYKQQAEFILKQISRGALSPPKMVIQMHH 60
           MVKLT+VGRV DG+PLAQG RYVN END+   YKQQ EFI+K+ISRGAL P KM I++ H
Sbjct: 1   MVKLTIVGRVNDGLPLAQGARYVNTENDNFSYYKQQGEFIIKEISRGALPPSKMTIRVDH 60

Query: 61  HSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIKP 120
           HS         F YL+ NG+C++TLCDS YPRKLA HYLQDLQ+EF KFD +L+  + +P
Sbjct: 61  HS---------FNYLVVNGICFITLCDSSYPRKLAFHYLQDLQKEFDKFDHSLIGKITRP 120

Query: 121 YSFPKFGNL 130
           YSF +F  +
Sbjct: 121 YSFIRFDGI 120

[Close]

BLAST of Carg22098 vs. TrEMBL
Match: tr|E0CUH4|E0CUH4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_16s0050g00060 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 5.8e-37
Identity = 82/130 (63.08%), Postives = 98/130 (75.38%), Query Frame = 0


Query: 1   MVKLTMVGRVRDGVPLAQGIRYVN-EENDDVLGYKQQAEFILKQISRGALSPPKMVIQMH 60
           MVKLT+VGRV DG+PLAQG+RY N EEN++ L YKQQAEFILK+ISRGALSP KM I + 
Sbjct: 1   MVKLTIVGRVSDGLPLAQGLRYQNDEENENFLCYKQQAEFILKEISRGALSPSKMTIHID 60

Query: 61  HHSFMYRSNSLFFTYLIENGVCYMTLCDSLYPRKLAIHYLQDLQREFSKFDDALLNSLIK 120
           H+          F YL+ENG C++TLCDS YPRKLA HYLQDLQ+EF KFD  L+  + K
Sbjct: 61  HYH--------CFNYLVENGHCFITLCDSSYPRKLAFHYLQDLQKEFEKFDIGLMEKITK 120

Query: 121 PYSFPKFGNL 130
           PYSF +F  +
Sbjct: 121 PYSFVRFDGI 122

The following BLAST results are available for this feature:

BLAST of Carg22098 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022944814.1	1.3e-56	88.37	25.3 kDa vesicle transport protein isoform X1 [Cucurbita moschata]	[more]
XP_022944815.1	1.3e-56	88.37	25.3 kDa vesicle transport protein isoform X2 [Cucurbita moschata]	[more]
XP_022968543.1	2.2e-56	87.60	25.3 kDa vesicle transport protein isoform X2 [Cucurbita maxima]	[more]
XP_022968542.1	2.2e-56	87.60	25.3 kDa vesicle transport protein isoform X1 [Cucurbita maxima]	[more]
XP_023541413.1	2.5e-55	86.05	25.3 kDa vesicle transport protein [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22098 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G52270.1	1.1e-30	52.67	SNARE-like superfamily protein	[more]
AT1G11890.1	1.4e-20	36.03	Synaptobrevin family protein	[more]

BLAST of Carg22098 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q94AU2\|SEC22_ARATH	2.5e-19	36.03	25.3 kDa vesicle transport protein OS=Arabidopsis thaliana OX=3702 GN=SEC22 PE=2...	[more]
sp\|Q5ZJW4\|SC22B_CHICK	9.0e-17	32.87	Vesicle-trafficking protein SEC22b OS=Gallus gallus OX=9031 GN=SEC22B PE=2 SV=1	[more]
sp\|Q6P7L4\|SC22B_XENTR	2.0e-16	33.57	Vesicle-trafficking protein SEC22b OS=Xenopus tropicalis OX=8364 GN=sec22b PE=2 ...	[more]
sp\|O08547\|SC22B_MOUSE	2.6e-16	32.17	Vesicle-trafficking protein SEC22b OS=Mus musculus OX=10090 GN=Sec22b PE=1 SV=3	[more]
sp\|Q5RAI9\|SC22B_PONAB	2.6e-16	32.17	Vesicle-trafficking protein SEC22b OS=Pongo abelii OX=9601 GN=SEC22B PE=2 SV=3	[more]

BLAST of Carg22098 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LBE2\|A0A0A0LBE2_CUCSA	3.2e-51	79.07	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182070 PE=3 SV=1	[more]
tr\|A0A1S3AYX3\|A0A1S3AYX3_CUCME	5.4e-51	78.29	25.3 kDa vesicle transport protein isoform X1 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A1S4DTG2\|A0A1S4DTG2_CUCME	9.3e-51	80.16	25.3 kDa vesicle transport protein isoform X3 OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
tr\|A0A061G838\|A0A061G838_THECC	6.9e-38	61.24	SNARE superfamily protein OS=Theobroma cacao OX=3641 GN=TCM_015158 PE=3 SV=1	[more]
tr\|E0CUH4\|E0CUH4_VITVI	5.8e-37	63.08	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_16s0050g00060 PE=3 SV=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR011012	Longin-like_dom_sf
IPR010908	Longin_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22098-RA	Carg22098-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010908	Longin domain	SMART	SM01270	Longin_2	coord: 36..129 e-value: 5.2E-17 score: 72.5
IPR010908	Longin domain	PFAM	PF13774	Longin	coord: 60..127 e-value: 2.1E-15 score: 56.4
IPR010908	Longin domain	PROSITE	PS50859	LONGIN	coord: 6..108 score: 20.069
None	No IPR available	GENE3D	G3DSA:3.30.450.50		coord: 1..131 e-value: 3.8E-33 score: 116.1
None	No IPR available	PANTHER	PTHR21136	SNARE PROTEINS	coord: 1..128
None	No IPR available	PANTHER	PTHR21136:SF97	SNARE-LIKE SUPERFAMILY PROTEIN	coord: 1..128
IPR011012	Longin-like domain superfamily	SUPERFAMILY	SSF64356	SNARE-like	coord: 1..128

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22098	ClCG05G008020	Watermelon (Charleston Gray)	carwcgB0715
Carg22098	CsGy3G016980	Cucumber (Gy14) v2	carcgybB0733

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22098	Silver-seed gourd	carcarB594
Carg22098	Cucumber (Gy14) v1	carcgyB0828
Carg22098	Cucurbita maxima (Rimu)	carcmaB1031
Carg22098	Cucurbita maxima (Rimu)	carcmaB1032
Carg22098	Cucurbita moschata (Rifu)	carcmoB1002
Carg22098	Cucurbita moschata (Rifu)	carcmoB1003
Carg22098	Cucurbita pepo (Zucchini)	carcpeB1038
Carg22098	Cucurbita pepo (Zucchini)	carcpeB1039
Carg22098	Wild cucumber (PI 183967)	carcpiB0771
Carg22098	Cucumber (Chinese Long) v2	carcuB0754
Carg22098	Cucumber (Chinese Long) v3	carcucB0774
Carg22098	Bottle gourd (USVL1VR-Ls)	carlsiB675
Carg22098	Melon (DHL92) v3.5.1	carmeB0732
Carg22098	Melon (DHL92) v3.6.1	carmedB0743
Carg22098	Watermelon (97103) v1	carwmB0736
Carg22098	Watermelon (97103) v2	carwmbB0772
Carg22098	Watermelon (97103) v2	carwmbB0773
Carg22098	Wax gourd	carwgoB0871
Carg22098	Wax gourd	carwgoB0872