Carg22095 (gene) Silver-seed gourd

Overview
NameCarg22095
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionFlap endonuclease GEN-like
LocationCucurbita_argyrosperma_scaffold_229 : 83214 .. 87787 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TAAAAGAAAAGCGAAAACTAAGAAATCAAGGACCCCCACAAGCCGAAACCTCTCCGCGGGAGAAATGGGGGTAAAGAACTTATGGGATATCTTAGAATCGTGCAAGAAAACTCTCCCACTTCATCGTCTTCAGTAAGTGGTTTCCTTCATTTTCTCGGCAGCCAAACAGGGGATTTGGGTATTTGTATCTGTATTTTCTTTTGAGTTTTTGGGATTTTGAATTGGGGTTCAGGAATAAGAGGCTATGCATCGATCTCTCATGTTGGATGGTTCAGCTTCAAAATGTAAGCAAATCACATTCTTGTCTGAACCAGAAGATTTACCTGAAGGGGCTCTTTCACCGCCTTAGAGCGCTCATTGCCTTGAATTGCAGCCTTATTTTCGTTACAGGCATGCTCCACATGAAACTACACAGCTATTACGAACAACAAATGATGGGTTCTCGTTTAATTTTGCTTTCTTTTTGCTGTTTGTAGATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTGGGAATTCTCATAACCCACTTTCGCTTCATTTCTCCTTTTTACTTGAATGTTACTTACCAAAGATGCAACAAGACAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGGCGCTTGGTATCCCTTGTCTAGATGGGTAAATGCTTAAGTTTTCATTCTGTTTTTGGCTTAATGAAAGAGTTCATTCAATTTTCAATCAGAATCTTATGGTTTCCTGTCTCCTGAGCACTTGAATCTTTTTGCATATACCTCTGAATGTAGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGTAAGTTGAGTCTTAGTTATAATGTTTGAGTGCTCCACATGCTTATTGCTTTTGCATCTCTGTTGTATTGAACATCATTGCTATTATTAAAGCATCATTTTCTGATCAGGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCGAGGACAGTTTATAGGGACATATGCCTTGGTGAGTGTCCTAGAGCATGCGAAGTTTCTGTAGAGTTGGTTTATGGTTTTAAAAGATGTACTCATTATTCTTATTATTTGTTGTTAAATTAGGAGATGGTGGTCATGTAGTGTGTTATGAAATGGATGACATTGAAGGACAATTGGGCTTTGGAAGGAACTCAATGGTGCGTCTACATTTCGAACAATGTATGATTTAAGAGAGTAGAGTGTTTTTGTGAGATCTCACATTGGTTGGAGAGGTGAACGAATCATTTTTTATAAGGGTGTAGAAACCTCTCCCTAACAGATGCGTTTTAAAACCTTGAGGAGAAAGCCTAGAAGGGAAAGCCTAGAGAAGACAATATCTGCTAGTGGTGAGCTTCGACTGTTACAAATAGTATCAGAATTAGACACCGGGTAGTGCGCCAGCGAGAACGCTGGCCCCCAAGGAGGGTGGATTGTGAGATTTCATATTGTTTGGAGAGGGGAACGAAGCATTCTTTATAAGGTGTGGAAACCCCTCCCTAACAGACACATTTTAAAACCTTGAAGGGAAGCTCGGAAGGGAAAGCCTAGAGAAGACAATATCTGCTAGTGGTGAGCTTCGACTGTTACAAATAGTATCAGAATCAGACACCGGGTAGTGCGCCAGCAAGAACGCTGGCCCCCAAGGAGGGTGGATTGTGAGATTTCATATTGTTTGGAGAGGGGAACGAAGCATTCTTTATAAGGTGTGGAAACCCCTCCCTAACAGACACATTTTAAAACCTTGAAGGGAAGCTCGGAAGGGAAAGCCTAGAGAAGACAATATCTGCTAGTGGTGGGCTTCGGCTGTTACAAATAGTATCAGAATCAGACACCGGGTAGTGCGCCAGCGAGAATGCTAGCCCCCAAGGAGGGTGGATTGTGAGATTCCATATTGTTTGGAGAGGGGAATGAAGCATTCTTTATAAGGTGTGGAAACCCCTCCCTAACAGCGCATTTTAAAACCTTGAAGGGAAGCTCGGAAGGGAAAGATCAAAGAAGACTATATCTGCTAGCGGTGGGTTTGGGCTGTTACAAATGGTATTAGAGCCAGACACCGGGCAATGTGCCAGCCAAGTTGGGTGGATTGTGAGATCCCACATTTGTTGGAGAGAGGAATGAATTCTTTATAAGAGTGTGGAAACATCTCCCTAACAGACGCGTTTTAAAACTTTGAGGGGAAATCTGGAAGGAAAAGACCAAATTGGACAATATCTATTAGCGGTGGGCTTGGGCTGTTAGTGTTTCACTTGAAGGAAAGATGAGCTTTCTCTTTCTATGATCAAATATGTTATCATTACCAAATCATTTTGTGATTTCCAGATTGCTTTGGCCCTACTTCTTGGCAGTGACTACACGCAAGGCGTTTATGGCATGGGTCGTGTAGGTTTCAACTCCTGTTTTTCTCTATTGGATTGCTTTTTATACTAACAATTCGACTGCAGCATGTAACTGTGTCTATGCTGTTTTTGTACTCTTTGTAGGAATCTGCTCGTCAGATTGTTAAAACAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAATGAAGGGGAAAAATTCCAAGAAGCCAGGACTTGCTAGTTCTGGTCATATTACTTCTATCAAGCTTCATTCTCCTTTTTCAACACTAAAAGAAGTGGAATAGGGGAATTTGAGCCTTGGACAGAAACTAAAAAACAACCTTCTTAGCCTCACTAGTGGGCTTAGGAACTTAAGTAGTGCAGTTTTGATACTATTCTGATATGATAGGTCAATCAAGTTTTGATTTGTGATGTGGGTTACTTTGGTTTGGTTGTACAGGGGATGGGCAGTACATTCATAAACGTGAGGAGTTTTCACAAGTCATTAATGCCTATTTGAGACCCAAATGCCATTCAGCTGATTCTGATGCTGTGACTAGGTGAGCTTGTTGAACCTTTGGAATTACATTACAAATAGTTCTGTACTCTGTGTTTGTGTTTGCAAAAGAGATCTCACATTGGTTGGAGAGGAGAACGAAACATTCCTTACAAGGGTATAGAAATCTCCCCCTAGAAAACGTGTTTTAAAACTATGAGGTTGATGGTGATACATAACGGGCCAGAACAGACAACATCTGTTAGCGCTGGGCTGCTTCGTTGTAATTTTGTGTCATACTGATATTTACACGATTAGTCTTCAAACTTTCCTTTTTGAAATGCATGTAGATTTTGTTAAATTCATATGCCTTCAGCACTTTTTATTTTTCTCTACAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGGTTCTTTTTTTTTTCCTTCATCTTTGGAGCTAACTAGAAAATGGTTCCTTTGATGTTTAGCTTGTGAATAACCCATGCATGGTTCAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAGACCTCGGTTTCAACATTCCACTTCAAGAGGTATGTTTATTTCTTCAAGAGTTACTTTTATCAGTTGTTACTGATATGGATACTGTTTGATTGCATGTTTTTTATTACAGGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGGTATGGAGTGTCATTACATAATTTCTTCTATAACAAATGACGATTTGGATACTTCACAACTATTTCTTTTTGAATATTTCCACAGTGCCTGTCCAGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCGAACTCTGTTGCTTGAAATCGAATCTGAAAGCAGGGCGGTTCGAAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGATTTGCAAGAGATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCAATCTCTTAAGCCCTTCACCTGCAATTCAAACGCGCAAAGTTTCGAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAGGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGACTTCCTCTGATAGGCCATAAATGTATTATGTATATTGCAACGAAATGTGCAACGCTACCGAAGGAATTAGGATTTAGAATCTGGTTTTTAGATATTGTCTGCTTTGACCCGTTACGTATCGCCGTCAGCTAGGGAGAGATTTCCACACATTTATAAGAAATAAT

mRNA sequence

TAAAAGAAAAGCGAAAACTAAGAAATCAAGGACCCCCACAAGCCGAAACCTCTCCGCGGGAGAAATGGGGGTAAAGAACTTATGGGATATCTTAGAATCGTGCAAGAAAACTCTCCCACTTCATCGTCTTCAGTAAGTGGTTTCCTTCATTTTCTCGGCAGCCAAACAGGGGATTTGGGTATTTGTATCTGTATTTTCTTTTGAGTTTTTGGGATTTTGAATTGGGGTTCAGGAATAAGAGGCTATGCATCGATCTCTCATGTTGGATGGTTCAGCTTCAAAATGTAAGCAAATCACATTCTTGTCTGAACCAGAAGATTTACCTGAAGGGGCTCTTTCACCGCCTTAGAGCGCTCATTGCCTTGAATTGCAGCCTTATTTTCGTTACAGATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGGCGCTTGGTATCCCTTGTCTAGATGGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCGAGGACAGTTTATAGGGACATATGCCTTGGTGAGTGTCCTAGAGCATGCGAAGTTTCTGTAGAGTTGATTGCTTTGGCCCTACTTCTTGGCAGTGACTACACGCAAGGCGTTTATGGCATGGGTCGTGAATCTGCTCGTCAGATTGTTAAAACAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAATGAAGGGGAAAAATTCCAAGAAGCCAGGACTTGCTAGTTCTGGGGATGGGCAGTACATTCATAAACCACTTTTTATTTTTCTCTACAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAGACCTCGGTTTCAACATTCCACTTCAAGAGGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGTGCCTGTCCAGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCGAACTCTGTTGCTTGAAATCGAATCTGAAAGCAGGGCGGTTCGAAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGATTTGCAAGAGATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCAATCTCTTAAGCCCTTCACCTGCAATTCAAACGCGCAAAGTTTCGAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAGGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGACTTCCTCTGATAGGCCATAAATGTATTATGTATATTGCAACGAAATGTGCAACGCTACCGAAGGAATTAGGATTTAGAATCTGGTTTTTAGATATTGTCTGCTTTGACCCGTTACGTATCGCCGTCAGCTAGGGAGAGATTTCCACACATTTATAAGAAATAAT

Coding sequence (CDS)

ATGGTTCAGCTTCAAAATGTAAGCAAATCACATTCTTGTCTGAACCAGAAGATTTACCTGAAGGGGCTCTTTCACCGCCTTAGAGCGCTCATTGCCTTGAATTGCAGCCTTATTTTCGTTACAGATGGTTCAATTCCTGGCATCAAACTTTCAACTTATAGACGCCGTTTGAACAATGGAAGTGAGGTTGTTAAAAATGACACAAATTCCCAGCAAATATCCTCACTGAAAAGAAACAAGGGTTCTGAGTTCTCTTTAATGATCAAAGAGGCAAAAGCCTTAGGACTGGCGCTTGGTATCCCTTGTCTAGATGGGCTCGAGGAAGGGGAAGCACAATGTGCATTACTAAATTCAGAGCTATTATGTGATGGATGTTTTACTTCAGATTCAGATGTTTTCCTTTTTGGTGCGAGGACAGTTTATAGGGACATATGCCTTGGTGAGTGTCCTAGAGCATGCGAAGTTTCTGTAGAGTTGATTGCTTTGGCCCTACTTCTTGGCAGTGACTACACGCAAGGCGTTTATGGCATGGGTCGTGAATCTGCTCGTCAGATTGTTAAAACAGTAGGAGATAGCACTGTCCTTCAAAAAATTGCATCTGAAGGACTGTCTTTCACAATGAAGGGGAAAAATTCCAAGAAGCCAGGACTTGCTAGTTCTGGGGATGGGCAGTACATTCATAAACCACTTTTTATTTTTCTCTACAGGGTTCTTATTCAGCATTCTTTTCAACGTGCCAAGCTTCAGCAGTTCTGTGCCGAATTTTTTGCTTGGCCTCCTGAGAAAACAGATGAGTACATTCTTCCAAAGATAGCAGAAAAAGATCTACGACGATTTGCTAATCTTCGTTCGAACACATCAGACCTCGGTTTCAACATTCCACTTCAAGAGGTACCTGTAAGTTGTCCTGTTTCTGGAATCGTCAAGCACCGAAAAGTCCAGGGGAACGAATGCTATGAGGTTTCATGGAAAAATTTAGATGGGCTTAGTTCATCTGTTGTACCAGCAGATCTCTTGCAGAGTGCCTGTCCAGAGATGATTGTAGAATTTGAAGAGCAAAGAGCTCAAGGAAGAAAACCAAATAAGTGCAGAACAAAAACAAAGAAGTCAGAGGCTACTGTGGCTGAAATTGATGAAAGATTCCGAACTCTGTTGCTTGAAATCGAATCTGAAAGCAGGGCGGTTCGAAATCTTTCCCAAGCTCCAATAGTTTCGGAAAACAGTAACTCTGCTACTGGTTTGGATGATTTGCAAGAGATTATTCTTGACGTCGAACCAACCATTGTTGATCATGCTCACGGTACAGAGAACGTTGAGGTCATCAATCTCTTAAGCCCTTCACCTGCAATTCAAACGCGCAAAGTTTCGAAATTTCGACAGGGAAACTGTGAAAAGATTGATGTAATTGATTTGAGTGACACAGAAAATGATCAGTCACCTGAACATGAGAGAAAGGCAAGAGAGTTGAGATTGTTCTTAGCCTCCTTAAAGGGTAAATGA

Protein sequence

MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICLGECPRACEVSVELIALALLLGSDYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYIHKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK
Homology
[Close]
BLAST of Carg22095 vs. NCBI nr
Match: XP_022944807.1 (flap endonuclease GEN-like 2 [Cucurbita moschata])

HSP 1 Score: 911.0 bits (2353), Expect = 1.8e-261
Identity = 479/529 (90.55%), Postives = 487/529 (92.06%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG
Sbjct: 35  MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL
Sbjct: 95  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSDVFLFGARTVYRDICLG+     C    ++  +L       IALALLLGS
Sbjct: 155 LCDGCFTSDSDVFLFGARTVYRDICLGDGGHVVCYEMDDIEGQLGFGRNSMIALALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYIHK 240
           DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLS+TMKGKNSKKPGL +SGDGQY+HK
Sbjct: 215 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSYTMKGKNSKKPGLPNSGDGQYMHK 274

Query: 241 ----PLFIFLY--------------RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                  I  Y              RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK
Sbjct: 275 CEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS
Sbjct: 335 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
           SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES
Sbjct: 395 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 454

Query: 421 ESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAI 480
           ESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAI
Sbjct: 455 ESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAI 514

Query: 481 QTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           QTRKVSKF+QGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK
Sbjct: 515 QTRKVSKFQQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 563

[Close]
BLAST of Carg22095 vs. NCBI nr
Match: XP_023541410.1 (flap endonuclease GEN-like 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 877.9 bits (2267), Expect = 1.7e-251
Identity = 466/529 (88.09%), Postives = 478/529 (90.36%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG
Sbjct: 35  MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGL LGIPCLDGLEEGEAQCALLNSEL
Sbjct: 95  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLTLGIPCLDGLEEGEAQCALLNSEL 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSDVFLFGARTVYRDI LG+     C    ++  +L       IALALLLGS
Sbjct: 155 LCDGCFTSDSDVFLFGARTVYRDIGLGDGGHVVCYEMDDIERQLGFGRNSMIALALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYIHK 240
           DY+QGVYGMGRESA QIVK VGDSTVLQKIASEGLSFT KGKNSKKPGL +SGDGQY+HK
Sbjct: 215 DYSQGVYGMGRESACQIVKAVGDSTVLQKIASEGLSFTKKGKNSKKPGLRNSGDGQYMHK 274

Query: 241 ----PLFIFLY--------------RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                  I  Y              RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK
Sbjct: 275 CEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAEKDLRRFANLRSNTS+LGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS
Sbjct: 335 IAEKDLRRFANLRSNTSNLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
           SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERF+TLLLEIES
Sbjct: 395 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFQTLLLEIES 454

Query: 421 ESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAI 480
           ESRAVRNLSQAPIVSENSNSATGLD+LQ+IILDVEPTIVDHAHGTENVEVI+LLSPSPAI
Sbjct: 455 ESRAVRNLSQAPIVSENSNSATGLDELQDIILDVEPTIVDHAHGTENVEVIDLLSPSPAI 514

Query: 481 QTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           QT    KFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK
Sbjct: 515 QT---CKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 560

[Close]
BLAST of Carg22095 vs. NCBI nr
Match: XP_022968219.1 (flap endonuclease GEN-like 2 [Cucurbita maxima])

HSP 1 Score: 875.2 bits (2260), Expect = 1.1e-250
Identity = 460/529 (86.96%), Postives = 478/529 (90.36%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTY+RRLNNG
Sbjct: 35  MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYKRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEVVKNDTNSQQISSLKRN+GSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL
Sbjct: 95  SEVVKNDTNSQQISSLKRNQGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSDVFLFGARTVYRDICLG+     C    ++  +L       I+LALLLGS
Sbjct: 155 LCDGCFTSDSDVFLFGARTVYRDICLGDGGHVVCYEMDDIERQLGFGRNSMISLALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYIHK 240
           DY+QGVYGMGRESA QIVKTVGDSTVLQKIASEGLSFT KGKNSKK GL +SGDGQ++HK
Sbjct: 215 DYSQGVYGMGRESACQIVKTVGDSTVLQKIASEGLSFTKKGKNSKKSGLPNSGDGQFMHK 274

Query: 241 ----PLFIFLY--------------RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                  I  Y              RVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK
Sbjct: 275 CEEFSQVIDAYLRPKCHSADSDAVTRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAEKDLRRFANLRSNT+ LGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS
Sbjct: 335 IAEKDLRRFANLRSNTAGLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
           SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKC+TKTKKSEATVAEID+RF+TLLLEIES
Sbjct: 395 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCKTKTKKSEATVAEIDKRFQTLLLEIES 454

Query: 421 ESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAI 480
           ESRAVRNLSQAPIVSENSNSATGLD+LQ+II DVEPTIVDHAHGTE VEVINLLSPSPAI
Sbjct: 455 ESRAVRNLSQAPIVSENSNSATGLDELQDIIFDVEPTIVDHAHGTEIVEVINLLSPSPAI 514

Query: 481 QTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           QTRKV KF+QGNCEKIDVIDLSDTENDQSPEHERKA ELRLFL SLKGK
Sbjct: 515 QTRKVPKFQQGNCEKIDVIDLSDTENDQSPEHERKASELRLFLTSLKGK 563

[Close]
BLAST of Carg22095 vs. NCBI nr
Match: XP_022140863.1 (flap endonuclease GEN-like 2 [Momordica charantia])

HSP 1 Score: 727.6 bits (1877), Expect = 2.8e-206
Identity = 385/532 (72.37%), Postives = 428/532 (80.45%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQNVSKSHSCL++KIYL+GLFHRLRALIALNCS+IFVTDGSIPGIKLSTYRRRLNNG
Sbjct: 35  MVQLQNVSKSHSCLHKKIYLQGLFHRLRALIALNCSIIFVTDGSIPGIKLSTYRRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEV +ND NSQQI SLKRNKGSEFSLMIKEAKALGLALGIPCLDG+EE EAQCALLNSE 
Sbjct: 95  SEVAQNDANSQQIPSLKRNKGSEFSLMIKEAKALGLALGIPCLDGIEEAEAQCALLNSES 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSDVFLFGARTVYRDICLG+     C    ++  +L       + LALLLGS
Sbjct: 155 LCDGCFTSDSDVFLFGARTVYRDICLGDGGHVVCYEMADIERQLGFGRNSMVTLALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYIHK 240
           DY+QGVYG+GRESA QIVK VGD  VLQKIASEGLSFT KGKNSKK GL+ SGDGQ +HK
Sbjct: 215 DYSQGVYGLGRESACQIVKAVGDGAVLQKIASEGLSFTKKGKNSKKQGLSKSGDGQCLHK 274

Query: 241 PLFIF------------------LYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                                  + RVL+QH FQR KLQQ CAE F WPPEKTDEYILPK
Sbjct: 275 CDHFLKVIDAYLKPKCHSADSDAVTRVLVQHPFQRIKLQQICAELFTWPPEKTDEYILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAE+DLRRFANLRSNTS LGFNIPLQE+P +CPVSGIVKHRKVQG++C+EVSWK+L+GL 
Sbjct: 335 IAERDLRRFANLRSNTSALGFNIPLQEIPANCPVSGIVKHRKVQGSDCFEVSWKDLNGLD 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
           SS+VPADLLQSACPEMIVEFEEQ+AQG K N+ +TKTKKSEA VAEID+R +TLLL+IES
Sbjct: 395 SSIVPADLLQSACPEMIVEFEEQKAQGMKQNRRKTKTKKSEAAVAEIDKRLQTLLLQIES 454

Query: 421 ESRAVR--NLSQAPIVSENSNSATGLDDL-QEIILDVEPTIVDHAHGTENVEVINLLSPS 480
           ESRAV   +LS  PIVSE+S SATG+D++ QE  LDVEPTI+D    TE +EVI+LLSPS
Sbjct: 455 ESRAVHSLSLSHTPIVSESSTSATGVDEMNQEDFLDVEPTIIDRTRSTERIEVIDLLSPS 514

Query: 481 PAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           PAIQT KVSKF                 +D+SPEHERKARELR FL SL+ K
Sbjct: 515 PAIQTSKVSKFXXXXXXXXXXXXXXXXXSDRSPEHERKARELRAFLVSLRSK 566

[Close]
BLAST of Carg22095 vs. NCBI nr
Match: XP_004140848.1 (PREDICTED: flap endonuclease GEN-like 2 isoform X2 [Cucumis sativus] >KGN57364.1 hypothetical protein Csa_3G182000 [Cucumis sativus])

HSP 1 Score: 690.6 bits (1781), Expect = 3.8e-195
Identity = 371/532 (69.74%), Postives = 415/532 (78.01%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           +V+L +VSKSH   N K YLKGLF+RLR LIALNCSLIFVTDGSIPGIKLSTYRRRLNNG
Sbjct: 35  IVELSSVSKSHCHSNSKFYLKGLFYRLRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           +EV + D N QQI SLKRNKGSEFSLMIKEA+ALGLALGIPCLD +EE EAQCALLNSEL
Sbjct: 95  NEVAQTDANPQQICSLKRNKGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNSEL 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSD FLFGARTVYRDICLG+     C    ++   L       I  ALLLGS
Sbjct: 155 LCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYEMDDIETRLGFGRNSMITFALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYI-- 240
           DY+QGVYGMGRESA Q+VK VGD  VLQKI SEGL+   KG+NSKK GL  SG G Y+  
Sbjct: 215 DYSQGVYGMGRESACQLVKAVGDGAVLQKITSEGLALAKKGENSKKQGLPKSGHGHYMLK 274

Query: 241 ----------------HKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                           H      + RVL QH FQ  KLQQ CAEFF W PEKTDE ILPK
Sbjct: 275 CDEFSEVIDAYLKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAE+DLRRFAN+RS TS+LGFNIPLQE+PVSCP+SGIVKHRKVQGNECYEVSWKN+ GL+
Sbjct: 335 IAERDLRRFANIRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLN 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
            SVV ADLLQ ACPEMI+EFEE+RA G+K NK +TKTKKS A +AEID+R +TLLLEIES
Sbjct: 395 LSVVSADLLQRACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIES 454

Query: 421 ESRAVRNLSQAPIVSENSNSATGLDDL-QEIILDVEPTIVDHAH--GTENVEVINLLSPS 480
           ESR V N+S  PI  ++  S TG+ +L QE+ L++EP IVDHA    T+ +EVI+LLSPS
Sbjct: 455 ESRVVHNISHVPI--DSKTSGTGVHELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPS 514

Query: 481 PAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           PAIQTR VSKF+Q   +KIDVIDLSDTE DQSPEHERKARELR FLASLKGK
Sbjct: 515 PAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLKGK 563

[Close]
BLAST of Carg22095 vs. TAIR10
Match: AT3G48900.2 (single-stranded DNA endonuclease family protein)

HSP 1 Score: 403.7 bits (1036), Expect = 1.7e-112
Identity = 245/570 (42.98%), Postives = 334/570 (58.60%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MV+L  V+KS+    +K+YL+G FHRLRALIALNCS+I V+DG+IPGIK+ TY+RRL   
Sbjct: 35  MVELHKVNKSYCATKEKVYLRGFFHRLRALIALNCSIILVSDGAIPGIKVPTYKRRLKAR 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
            E+  +     + +SLKRN GSEFS +IKEAK +   LGI CLDG+EE EAQCALLNSE 
Sbjct: 95  FEIADDGVEPSKETSLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSES 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVE-------LIALALLLGS 180
           LCD CF+ DSD+FLFGA+TVYR+ICLGE     C    ++  +       LIALALLLGS
Sbjct: 155 LCDACFSFDSDIFLFGAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKK-------------P 240
           DY+QGV G+ +E A ++V+++GD+ +L+K+ASEGLSF  K + SKK             P
Sbjct: 215 DYSQGVRGLRQEKACELVRSIGDNVILEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLP 274

Query: 241 GLASSGDG------QYIHKPLFIFL------------YRVLIQHSFQRAKLQQFCAEFFA 300
            +  +G+       + I + +  F+             R L + SFQR KLQ+ C +FF 
Sbjct: 275 LVVINGNNRDPERLEEIKQVIDAFMNPKCHQADSNTVSRALAEFSFQRTKLQEICHQFFE 334

Query: 301 WPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQ--EVPVSCPVSGIVKHRKVQG 360
           WPPEKTDEYILPK+AE++LRRFANL+S ++++  N+PL   ++P  CPVS I+K RKVQG
Sbjct: 335 WPPEKTDEYILPKVAERNLRRFANLQSRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQG 394

Query: 361 NECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVA 420
            EC+EVSW +L+GL SS+VPADL++ ACPE I+EF+E+ A                    
Sbjct: 395 RECFEVSWNDLEGLESSIVPADLVERACPEKIIEFKEKMAAXXXXXXXXXXXXXXXXXXX 454

Query: 421 EID------------------------ERFRTLLLEIESESRAVRNLSQAPIVSENSNSA 480
                                                 S+      L  +P   EN N+A
Sbjct: 455 XXXXXXXXXXXXXXXXXXXXXXXRXTLXXXXXXXXXXNSKKHDYLRLIDSP-DRENCNNA 514

Query: 481 TGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFRQ----GNCEKID 498
               D   + +   P   +        EVI+L+SP P  ++R VS+  Q     + +   
Sbjct: 515 WSNRDRLGVGMSSFPLYPE-------TEVIDLISPCPEARSRSVSRSYQEQKSHDHQLET 574

[Close]
BLAST of Carg22095 vs. TAIR10
Match: AT3G28030.1 (5'-3' exonuclease family protein)

HSP 1 Score: 84.3 bits (207), Expect = 2.3e-16
Identity = 58/154 (37.66%), Postives = 81/154 (52.60%), Query Frame = 0 

Query: 76   LKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLF 135
            L+RN  S  S M  E + L    GIP +    E EAQCA +    L DG  T DSDVFLF
Sbjct: 914  LERNAESVSSEMFAECQELLQIFGIPYIIAPMEAEAQCAFMEQSNLVDGIVTDDSDVFLF 973

Query: 136  GARTVYRDI----------CLGECPRACEVSVE-LIALALLLGSDYTQGVYGMGRESARQ 195
            GAR+VY++I           + +  +   +S + +I +A+LLGSDYT+G+ G+G  +A +
Sbjct: 974  GARSVYKNIFDDRKYVETYFMKDIEKELGLSRDKIIRMAMLLGSDYTEGISGIGIVNAIE 1033

Query: 196  IVKTVGDSTVLQKIAS--EGLSFTMKGKNSKKPG 217
            +V    +   LQK     E    T+ GK   K G
Sbjct: 1034 VVTAFPEEDGLQKFREWVESPDPTILGKTDAKTG 1067

[Close]
BLAST of Carg22095 vs. TAIR10
Match: AT1G01880.1 (5'-3' exonuclease family protein)

HSP 1 Score: 81.6 bits (200), Expect = 1.5e-15
Identity = 70/202 (34.65%), Postives = 96/202 (47.52%), Query Frame = 0 

Query: 38  IFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQI----SSLKRNKGSEFSLMIKEAKA 97
           +FV DG+   +K      R    S +   DT +  +     S++RNK   FS  ++E   
Sbjct: 71  VFVVDGTPSPLKSQARISRFFRSSGI---DTCNLPVIKDGVSVERNK--LFSEWVRECVE 130

Query: 98  LGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFGARTVYRDICLG-----E 157
           L   LGIP L    E EA CA LNS+   D C T DSD FLFGA  V +DI        E
Sbjct: 131 LLELLGIPVLKANGEAEALCAQLNSQGFVDACITPDSDAFLFGAMCVIKDIKPNSREPFE 190

Query: 158 CPRACEVS-------VELIALALLLGSDY-TQGVYGMGRESARQIVKTVGDSTVLQKIAS 217
           C     +          LIA++LL+G+DY + GV G+G + A +IV+   +  VL+++  
Sbjct: 191 CYHMSHIESGLGLKRKHLIAISLLVGNDYDSGGVLGIGVDKALRIVREFSEDQVLERLQD 250

Query: 218 EGLSFTMKGKNSKKPGLASSGD 223
            G      G     PG   SGD
Sbjct: 251 IG-----NGLQPAVPGGIKSGD 262

[Close]
BLAST of Carg22095 vs. TAIR10
Match: AT5G26680.1 (5'-3' exonuclease family protein)

HSP 1 Score: 55.1 bits (131), Expect = 1.5e-07
Identity = 47/207 (22.71%), Postives = 85/207 (41.06%), Query Frame = 0 

Query: 19  YLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDT------NSQQ 78
           +L+G+F+R   L+      ++V DG  P +K     +R +  ++   + T      N + 
Sbjct: 64  HLQGMFNRTIRLLEAGIKPVYVFDGKPPELKRQELAKRYSKRADATADLTGAIEAGNKED 123

Query: 79  ISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDV 138
           I    +           + K L   +G+P ++   E EAQCA L       G  + D D 
Sbjct: 124 IEKYSKRTVKVTKQHNDDCKRLLRLMGVPVVEATSEAEAQCAALCKSGKVYGVASEDMDS 183

Query: 139 FLFGARTVYRDICLGECPRACEVSV-----------------ELIALALLLGSDYTQGVY 198
             FGA    R +     P + ++ V                 + I L +L G DY   + 
Sbjct: 184 LTFGAPKFLRHLM---DPSSRKIPVMEFEVAKILEELQLTMDQFIDLCILSGCDYCDSIR 243

Query: 199 GMGRESARQIVKTVGD-STVLQKIASE 202
           G+G ++A ++++  G   T+L+ +  E
Sbjct: 244 GIGGQTALKLIRQHGSIETILENLNKE 267

[Close]
BLAST of Carg22095 vs. Swiss-Prot
Match: sp|Q8W5R1|GENL2_ORYSJ (Flap endonuclease GEN-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SEND1 PE=2 SV=1)

HSP 1 Score: 412.1 bits (1058), Expect = 8.5e-114
Identity = 235/497 (47.28%), Postives = 311/497 (62.58%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           +VQ+ + ++S +    K+YLK LFHR+RAL+ALNC+L+FVTDG+IP +KL+TYRRRL + 
Sbjct: 35  LVQMYSANRSPAFAKDKVYLKNLFHRIRALLALNCTLLFVTDGAIPSLKLATYRRRLGSI 94

Query: 61  SEVVK--NDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNS 120
           S   K  +  NS    SL+RNKGSEFS MIKEAK LG+ALGIPCLDGLEE EAQCA L+ 
Sbjct: 95  SHAAKESDQPNSHPSISLRRNKGSEFSCMIKEAKRLGMALGIPCLDGLEEAEAQCASLDL 154

Query: 121 ELLCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSV-------ELIALALLL 180
           E LCDGCFTSDSD FLFGARTVYRD+ +GE     C    ++          LI+LA+LL
Sbjct: 155 ESLCDGCFTSDSDAFLFGARTVYRDVFIGEGGYVICYEMEDIEKTLGFGRNSLISLAVLL 214

Query: 181 GSDYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFT--MKGKNSK----------- 240
           GSDY+ GV G G E+A ++VK+VGD+ +L +I S G+  T   KGKNS            
Sbjct: 215 GSDYSNGVNGFGPETACRLVKSVGDNLILDQILSNGVKATRKCKGKNSGNKVDDMCPKAS 274

Query: 241 --KPGLASSGDGQY-----------IHKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPP 300
             + G+    DGQ+            H P    + RV  QH F R +LQ+ C E+F W P
Sbjct: 275 SCEVGMTQDSDGQFRDVINAYLEPKCHSPDSEAVQRVCGQHPFLRPQLQKICEEYFDWSP 334

Query: 301 EKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYE 360
           EKTD+YILPKIAE++LRRF++LRS +S LG    L E+PV CPV  IVK RKV GNECYE
Sbjct: 335 EKTDQYILPKIAERELRRFSDLRSASSALGIKPLLSEIPVPCPVLAIVKQRKVHGNECYE 394

Query: 361 VSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDER 420
           VSW+N++GL  SVVP DL++SACPE I EF E++ + +K  +     K  +A V ++DE+
Sbjct: 395 VSWRNIEGLQVSVVPGDLVKSACPEKITEFLEKKGEEKKQKRRARPKKSGQAAVKDVDEQ 454

Query: 421 FRTLLLEIESESRAVRNLSQAPIVSENSNSATGLDDLQEIILDVEPTIVDHAHGTENVEV 458
            + LLL IE++S  +   + +   +  +     ++D                       V
Sbjct: 455 LQELLLGIEADSGGILGATASVCQTLTAAYTVAVED-----------------------V 506

[Close]
BLAST of Carg22095 vs. Swiss-Prot
Match: sp|Q9M2Z3|GENL2_ARATH (Flap endonuclease GEN-like 2 OS=Arabidopsis thaliana OX=3702 GN=GEN2 PE=2 SV=2)

HSP 1 Score: 403.7 bits (1036), Expect = 3.0e-111
Identity = 245/570 (42.98%), Postives = 334/570 (58.60%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MV+L  V+KS+    +K+YL+G FHRLRALIALNCS+I V+DG+IPGIK+ TY+RRL   
Sbjct: 35  MVELHKVNKSYCATKEKVYLRGFFHRLRALIALNCSIILVSDGAIPGIKVPTYKRRLKAR 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
            E+  +     + +SLKRN GSEFS +IKEAK +   LGI CLDG+EE EAQCALLNSE 
Sbjct: 95  FEIADDGVEPSKETSLKRNMGSEFSCIIKEAKVIASTLGILCLDGIEEAEAQCALLNSES 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVE-------LIALALLLGS 180
           LCD CF+ DSD+FLFGA+TVYR+ICLGE     C    ++  +       LIALALLLGS
Sbjct: 155 LCDACFSFDSDIFLFGAKTVYREICLGEGGYVVCYEMDDIKKKLGLGRNSLIALALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKK-------------P 240
           DY+QGV G+ +E A ++V+++GD+ +L+K+ASEGLSF  K + SKK             P
Sbjct: 215 DYSQGVRGLRQEKACELVRSIGDNVILEKVASEGLSFAEKPRKSKKQVRPSVCSKKGTLP 274

Query: 241 GLASSGDG------QYIHKPLFIFL------------YRVLIQHSFQRAKLQQFCAEFFA 300
            +  +G+       + I + +  F+             R L + SFQR KLQ+ C +FF 
Sbjct: 275 LVVINGNNRDPERLEEIKQVIDAFMNPKCHQADSNTVSRALAEFSFQRTKLQEICHQFFE 334

Query: 301 WPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQ--EVPVSCPVSGIVKHRKVQG 360
           WPPEKTDEYILPK+AE++LRRFANL+S ++++  N+PL   ++P  CPVS I+K RKVQG
Sbjct: 335 WPPEKTDEYILPKVAERNLRRFANLQSRSTEVEVNLPLHKPQMPEKCPVSEIIKTRKVQG 394

Query: 361 NECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVA 420
            EC+EVSW +L+GL SS+VPADL++ ACPE I+EF+E+ A                    
Sbjct: 395 RECFEVSWNDLEGLESSIVPADLVERACPEKIIEFKEKMAAXXXXXXXXXXXXXXXXXXX 454

Query: 421 EID------------------------ERFRTLLLEIESESRAVRNLSQAPIVSENSNSA 480
                                                 S+      L  +P   EN N+A
Sbjct: 455 XXXXXXXXXXXXXXXXXXXXXXXRXTLXXXXXXXXXXNSKKHDYLRLIDSP-DRENCNNA 514

Query: 481 TGLDDLQEIILDVEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFRQ----GNCEKID 498
               D   + +   P   +        EVI+L+SP P  ++R VS+  Q     + +   
Sbjct: 515 WSNRDRLGVGMSSFPLYPE-------TEVIDLISPCPEARSRSVSRSYQEQKSHDHQLET 574

[Close]
BLAST of Carg22095 vs. Swiss-Prot
Match: sp|Q17RS7|GEN_HUMAN (Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2)

HSP 1 Score: 90.9 bits (224), Expect = 4.3e-17
Identity = 62/195 (31.79%), Postives = 100/195 (51.28%), Query Frame = 0 

Query: 17  KIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISSL 76
           K +L+ LF R+  L  ++  L+FV +G  P +K     +R  N S        S   S  
Sbjct: 50  KPHLRNLFFRISYLTQMDVKLVFVMEGEPPKLKADVISKR--NQSRY-----GSSGKSWS 109

Query: 77  KRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLFG 136
           ++   S F  +++E   +   LGIP +    E EA CA LN+    DGC T+D D FL+G
Sbjct: 110 QKTGRSHFKSVLRECLHMLECLGIPWVQAAGEAEAMCAYLNAGGHVDGCLTNDGDTFLYG 169

Query: 137 ARTVYRDICLG------ECPRACEVSVE-------LIALALLLGSDY-TQGVYGMGRESA 196
           A+TVYR+  +       +C     +  +       L+ LA+LLG DY  +GV G+G+E A
Sbjct: 170 AQTVYRNFTMNTKDPHVDCYTMSSIKSKLGLDRDALVGLAILLGCDYLPKGVPGVGKEQA 229

Query: 197 RQIVKTVGDSTVLQK 198
            ++++ +   ++LQ+
Sbjct: 230 LKLIQILKGQSLLQR 237

[Close]
BLAST of Carg22095 vs. Swiss-Prot
Match: sp|Q8BMI4|GEN_MOUSE (Flap endonuclease GEN homolog 1 OS=Mus musculus OX=10090 GN=Gen1 PE=1 SV=2)

HSP 1 Score: 90.1 bits (222), Expect = 7.4e-17
Identity = 59/196 (30.10%), Postives = 98/196 (50.00%), Query Frame = 0 

Query: 16  QKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNGSEVVKNDTNSQQISS 75
           +K +L+ LF R+  L  +N  L+FV +G  P +K     +R        +        S 
Sbjct: 49  KKPHLRNLFFRISYLTQMNVKLVFVMEGEPPMLKADVISKR-------TQTRYGPSGKSR 108

Query: 76  LKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDVFLF 135
            ++   S F  +++E   +   LG+P +    E EA CA LN+    DGC T+D D FL+
Sbjct: 109 SQKTGRSHFKSVLRECLEMLECLGMPWVQAAGEAEAMCAYLNASGHVDGCLTNDGDAFLY 168

Query: 136 GARTVYRDICLG------ECPRACEVSVE-------LIALALLLGSDY-TQGVYGMGRES 195
           GA+TVYR+  +       +C     +  +       L+ LA+LLG DY  +GV G+G+E 
Sbjct: 169 GAQTVYRNFTMNTKDPHVDCYTISSIKSKLGLDRDALVGLAVLLGCDYLPKGVPGVGKEQ 228

Query: 196 ARQIVKTVGDSTVLQK 198
           A ++++     ++LQ+
Sbjct: 229 ALKLLQIFKGQSLLQR 237

[Close]
BLAST of Carg22095 vs. Swiss-Prot
Match: sp|P61942|FEN_NANEQ (Flap endonuclease 1 OS=Nanoarchaeum equitans (strain Kin4-M) OX=228908 GN=fen PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 6.3e-16
Identity = 64/202 (31.68%), Postives = 98/202 (48.51%), Query Frame = 0 

Query: 19  YLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRR------LNNGSEVVKNDTNSQQ 78
           +L GLF+R   L+      I+V DG+ P  K+  + +R      L +  +      N Q+
Sbjct: 58  HLSGLFYRTINLLEYGIKPIYVFDGTPPKFKIVAWEKRKKHKEQLESKYKEALKKGNIQE 117

Query: 79  ISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSELLCDGCFTSDSDV 138
                ++ G   S M++EAK L  A+GIP +    EGEA+ A L  + + D C + D D 
Sbjct: 118 AIKYAKSLGKLDSYMVEEAKKLLEAMGIPYVQAPSEGEAEAAYLTKKGVSDYCGSQDYDS 177

Query: 139 FLFGARTVYRDICLGE-------------CPRACEVSV----------ELIALALLLGSD 192
            LFG+  V R+I + E              P   E+            +LIA+A+LLG+D
Sbjct: 178 LLFGSPRVVRNITISEKRKLPGKNIYVEVKPEVIELEAVLNYWKITREQLIAIAMLLGTD 237

[Close]
BLAST of Carg22095 vs. TrEMBL
Match: tr|A0A0A0L8N4|A0A0A0L8N4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182000 PE=4 SV=1)

HSP 1 Score: 690.6 bits (1781), Expect = 2.5e-195
Identity = 371/532 (69.74%), Postives = 415/532 (78.01%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           +V+L +VSKSH   N K YLKGLF+RLR LIALNCSLIFVTDGSIPGIKLSTYRRRLNNG
Sbjct: 35  IVELSSVSKSHCHSNSKFYLKGLFYRLRTLIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           +EV + D N QQI SLKRNKGSEFSLMIKEA+ALGLALGIPCLD +EE EAQCALLNSEL
Sbjct: 95  NEVAQTDANPQQICSLKRNKGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNSEL 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLLGS 180
           LCDGCFTSDSD FLFGARTVYRDICLG+     C    ++   L       I  ALLLGS
Sbjct: 155 LCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYEMDDIETRLGFGRNSMITFALLLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYI-- 240
           DY+QGVYGMGRESA Q+VK VGD  VLQKI SEGL+   KG+NSKK GL  SG G Y+  
Sbjct: 215 DYSQGVYGMGRESACQLVKAVGDGAVLQKITSEGLALAKKGENSKKQGLPKSGHGHYMLK 274

Query: 241 ----------------HKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPK 300
                           H      + RVL QH FQ  KLQQ CAEFF W PEKTDE ILPK
Sbjct: 275 CDEFSEVIDAYLKPKCHSADSEAVTRVLDQHPFQHVKLQQICAEFFEWSPEKTDENILPK 334

Query: 301 IAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLS 360
           IAE+DLRRFAN+RS TS+LGFNIPLQE+PVSCP+SGIVKHRKVQGNECYEVSWKN+ GL+
Sbjct: 335 IAERDLRRFANIRSRTSELGFNIPLQEIPVSCPISGIVKHRKVQGNECYEVSWKNI-GLN 394

Query: 361 SSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEIES 420
            SVV ADLLQ ACPEMI+EFEE+RA G+K NK +TKTKKS A +AEID+R +TLLLEIES
Sbjct: 395 LSVVSADLLQRACPEMIIEFEEKRADGKKQNKGKTKTKKSAAVMAEIDKRLKTLLLEIES 454

Query: 421 ESRAVRNLSQAPIVSENSNSATGLDDL-QEIILDVEPTIVDHAH--GTENVEVINLLSPS 480
           ESR V N+S  PI  ++  S TG+ +L QE+ L++EP IVDHA    T+ +EVI+LLSPS
Sbjct: 455 ESRVVHNISHVPI--DSKTSGTGVHELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLSPS 514

Query: 481 PAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           PAIQTR VSKF+Q   +KIDVIDLSDTE DQSPEHERKARELR FLASLKGK
Sbjct: 515 PAIQTRNVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFLASLKGK 563

[Close]
BLAST of Carg22095 vs. TrEMBL
Match: tr|A0A1S3AYA2|A0A1S3AYA2_CUCME (flap endonuclease GEN-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484071 PE=4 SV=1)

HSP 1 Score: 670.2 bits (1728), Expect = 3.5e-189
Identity = 365/534 (68.35%), Postives = 409/534 (76.59%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           +VQL +VSKSH   N K YL+GLF+RLR LIALNCSLIFVTDGSIPGIK+STYRRRLNNG
Sbjct: 35  IVQLSSVSKSHCHSNSKFYLQGLFYRLRTLIALNCSLIFVTDGSIPGIKVSTYRRRLNNG 94

Query: 61  SE--VVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNS 120
           +E  V + D N QQI SLKRN GSEFSLMIKEA+ALGLALGIPCLD +EE EAQCALLNS
Sbjct: 95  NEKQVAQTDANPQQICSLKRNMGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNS 154

Query: 121 ELLCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLL 180
           ELLCDGCFTSDSD FLFGARTVYRDICLG+     C    ++   L       I  ALLL
Sbjct: 155 ELLCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYELDDIKTRLGFGRNSMITFALLL 214

Query: 181 GSDYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYI 240
           GSDY+QGVYGMGRESA Q+VK VGD  VLQKI SEGL+   KGKNSKK  L  SG+GQYI
Sbjct: 215 GSDYSQGVYGMGRESACQLVKAVGDVAVLQKITSEGLALAKKGKNSKKQELPKSGNGQYI 274

Query: 241 ------------------HKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYIL 300
                             H      + RVL+QH FQR KLQQ CAEFF WPP+KTDE IL
Sbjct: 275 LKCDEFSEVIDAYLKPKCHSADSEAVSRVLVQHPFQRVKLQQICAEFFGWPPDKTDEKIL 334

Query: 301 PKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDG 360
           P IAE+DLRRFAN+RS TS+LGFNIPLQE+PVSCPVSGIVKHRKVQGNECYEVSWKN+DG
Sbjct: 335 PWIAERDLRRFANIRSRTSELGFNIPLQEIPVSCPVSGIVKHRKVQGNECYEVSWKNIDG 394

Query: 361 LSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEI 420
           L  SVV ADLLQSACPEMIVEFEE+RA+G+K N             AEID+R +TLLLEI
Sbjct: 395 L-ISVVSADLLQSACPEMIVEFEEKRAEGKKQNXXXXXXXXXXXXXAEIDKRLQTLLLEI 454

Query: 421 ESESRAVRNLSQAPIVSENSNSATGLDDL-QEIILDVEPTIVDHAH--GTENVEVINLLS 480
           ESESRAV N+S  PI  ++  S TG+ +L QE+ L++EP IVDHA    T+ +EVI+LLS
Sbjct: 455 ESESRAVHNISHLPI--DSKTSGTGVHELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLS 514

Query: 481 PSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           PSPAI T +VSKF+Q   +KIDVIDLSDTE DQSPEHERKARELR F+ASLKGK
Sbjct: 515 PSPAIHTHRVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFIASLKGK 565

[Close]
BLAST of Carg22095 vs. TrEMBL
Match: tr|A0A1S3AY79|A0A1S3AY79_CUCME (flap endonuclease GEN-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484071 PE=4 SV=1)

HSP 1 Score: 650.6 bits (1677), Expect = 2.9e-183
Identity = 358/534 (67.04%), Postives = 402/534 (75.28%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           +VQL +VSKSH   N K YL+GLF+RLR LIALNCSLIFVTDGSIPGIK+STYRRRLNNG
Sbjct: 35  IVQLSSVSKSHCHSNSKFYLQGLFYRLRTLIALNCSLIFVTDGSIPGIKVSTYRRRLNNG 94

Query: 61  SE--VVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNS 120
           +E  V + D N QQI SLKRN GSEFSLMIKEA+ALGLALGIPCLD +EE EAQCALLNS
Sbjct: 95  NEKQVAQTDANPQQICSLKRNMGSEFSLMIKEAQALGLALGIPCLDAVEEAEAQCALLNS 154

Query: 121 ELLCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVEL-------IALALLL 180
           ELLCDGCFTSDSD FLFGARTVYRDICLG+     C    ++   L       I  ALLL
Sbjct: 155 ELLCDGCFTSDSDAFLFGARTVYRDICLGDSGHVVCYELDDIKTRLGFGRNSMITFALLL 214

Query: 181 GSDYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYI 240
           GSDY+QGVYGMGRESA Q+VK VGD  VLQKI SEGL+   KGKNSKK  L  SG+GQYI
Sbjct: 215 GSDYSQGVYGMGRESACQLVKAVGDVAVLQKITSEGLALAKKGKNSKKQELPKSGNGQYI 274

Query: 241 ------------------HKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYIL 300
                             H      + RVL+QH FQR KLQQ CAEFF WPP+KT     
Sbjct: 275 LKCDEFSEVIDAYLKPKCHSADSEAVSRVLVQHPFQRVKLQQICAEFFGWPPDKT----- 334

Query: 301 PKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDG 360
               E+DLRRFAN+RS TS+LGFNIPLQE+PVSCPVSGIVKHRKVQGNECYEVSWKN+DG
Sbjct: 335 ----ERDLRRFANIRSRTSELGFNIPLQEIPVSCPVSGIVKHRKVQGNECYEVSWKNIDG 394

Query: 361 LSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSEATVAEIDERFRTLLLEI 420
           L  SVV ADLLQSACPEMIVEFEE+RA+G+K N             AEID+R +TLLLEI
Sbjct: 395 L-ISVVSADLLQSACPEMIVEFEEKRAEGKKQNXXXXXXXXXXXXXAEIDKRLQTLLLEI 454

Query: 421 ESESRAVRNLSQAPIVSENSNSATGLDDL-QEIILDVEPTIVDHAH--GTENVEVINLLS 480
           ESESRAV N+S  PI  ++  S TG+ +L QE+ L++EP IVDHA    T+ +EVI+LLS
Sbjct: 455 ESESRAVHNISHLPI--DSKTSGTGVHELNQEVFLNIEPIIVDHARSCSTKRIEVIDLLS 514

Query: 481 PSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKARELRLFLASLKGK 500
           PSPAI T +VSKF+Q   +KIDVIDLSDTE DQSPEHERKARELR F+ASLKGK
Sbjct: 515 PSPAIHTHRVSKFQQKTSQKIDVIDLSDTEIDQSPEHERKARELRSFIASLKGK 556

[Close]
BLAST of Carg22095 vs. TrEMBL
Match: tr|A0A2I4F9S1|A0A2I4F9S1_9ROSI (flap endonuclease GEN-like 2 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996824 PE=4 SV=1)

HSP 1 Score: 581.6 bits (1498), Expect = 1.6e-162
Identity = 319/554 (57.58%), Postives = 387/554 (69.86%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQN SKSH C+ +K+YLKGLFHR+RALIALNCSLIFVTDGSIP IKL+TYRRRLN+G
Sbjct: 35  MVQLQNASKSHFCMKEKVYLKGLFHRIRALIALNCSLIFVTDGSIPAIKLATYRRRLNSG 94

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEV  N+ N Q+++SL+RN GSEFS M+KEAK LG+ALGIPCLDG+EE EAQCALLNSE 
Sbjct: 95  SEVTHNERNLQKVTSLRRNMGSEFSCMVKEAKVLGMALGIPCLDGIEEAEAQCALLNSES 154

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVE-------LIALALLLGS 180
           LCDGCFTSDSD+FLFGARTVYRDICLG+     C    +V  +       LI LAL+LGS
Sbjct: 155 LCDGCFTSDSDIFLFGARTVYRDICLGDGGYVICYEMADVERQLGYGRNSLITLALMLGS 214

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASS-------- 240
           DY+QGVYG+G ESA QIVK+VGD  VLQKIASEGLSF +K K SKK G  S         
Sbjct: 215 DYSQGVYGLGPESACQIVKSVGDKVVLQKIASEGLSFVLKRKGSKKQGTLSKCNNKENSL 274

Query: 241 --------------GDGQYI-----------HKPLFIFLYRVLIQHSFQRAKLQQFCAEF 300
                          D Q +           H      ++R L Q+ FQRAKLQQ C++F
Sbjct: 275 DQEMNVNGSEYNLLRDDQLLQVINAYLKPKCHSADSDAVHRTLAQYPFQRAKLQQICSQF 334

Query: 301 FAWPPEKTDEYILPKIAEKDLRRFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQG 360
           F WP EKTDEYILPKIAE++LRRF NLRS +S+LG  +PL ++PV CP+SG++KHRKVQG
Sbjct: 335 FEWPAEKTDEYILPKIAERNLRRFCNLRSTSSNLGLKLPLHKLPVKCPLSGVIKHRKVQG 394

Query: 361 NECYEVSWKNLDGLSSSVVPADLLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSE--AT 420
            +CYEVSW+ +DGL +SVVPADL++SACPE IVEFEE+RA G +    + + KKSE  ++
Sbjct: 395 RDCYEVSWEEVDGLKTSVVPADLVESACPEKIVEFEEKRAHGNQEKLRKPRPKKSEKGSS 454

Query: 421 VAEIDERFRTLLLEIE-SESRAVRNLSQAPIVSENSNSAT---------GLDDLQEIILD 480
           +AEID + + LL +I+   S AV + S   ++S N  +AT          LD +      
Sbjct: 455 LAEIDLKLQKLLHDIDMGSSAAVHDASSMVVISGNQTAATKVNQENQHPWLDPMSSAKCS 514

Query: 481 VEPTIVDHAHGTENVEVINLLSPSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHE 498
            +         T   EVI+LLSPSP  Q R VSKF Q N + IDVIDLS++E D SPEHE
Sbjct: 515 DDIPWSQVGPSTTKSEVIDLLSPSPLRQPRAVSKFTQSNGQGIDVIDLSESETDVSPEHE 574

[Close]
BLAST of Carg22095 vs. TrEMBL
Match: tr|A0A2N9HZS6|A0A2N9HZS6_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45145 PE=4 SV=1)

HSP 1 Score: 578.9 bits (1491), Expect = 1.1e-161
Identity = 316/525 (60.19%), Postives = 386/525 (73.52%), Query Frame = 0 

Query: 1   MVQLQNVSKSHSCLNQKIYLKGLFHRLRALIALNCSLIFVTDGSIPGIKLSTYRRRLNNG 60
           MVQLQNVSKSH CL +K+YLKGLFHRLRALIA+NCS++FV+DGSIP IKLSTYRRRLN+G
Sbjct: 75  MVQLQNVSKSHFCLKEKVYLKGLFHRLRALIAVNCSIVFVSDGSIPAIKLSTYRRRLNSG 134

Query: 61  SEVVKNDTNSQQISSLKRNKGSEFSLMIKEAKALGLALGIPCLDGLEEGEAQCALLNSEL 120
           SEV +++ N Q+++SL+RN GSEFS MIKEAK LG+ALGIPC+DG+EE EAQCALLNSE 
Sbjct: 135 SEVTQDERNLQKVTSLRRNMGSEFSCMIKEAKVLGMALGIPCVDGIEEAEAQCALLNSES 194

Query: 121 LCDGCFTSDSDVFLFGARTVYRDICLGE-----CPRACEVSVE-------LIALALLLGS 180
           LCDGCFTSDSDVFLFGARTVYRDICLG+     C    +V  +       LI LALLLG 
Sbjct: 195 LCDGCFTSDSDVFLFGARTVYRDICLGDGGYITCYEMTDVERQLGFGRNSLITLALLLGC 254

Query: 181 DYTQGVYGMGRESARQIVKTVGDSTVLQKIASEGLSFTMKGKNSKKPGLASSGDGQYI-- 240
           DY+QGVYG+G ESA QIVK+VGD+ VLQK+ASEGLSF  K + SK        D Q++  
Sbjct: 255 DYSQGVYGLGPESACQIVKSVGDNVVLQKVASEGLSFVKKKRGSKHD---PQRDDQHLQV 314

Query: 241 ---------HKPLFIFLYRVLIQHSFQRAKLQQFCAEFFAWPPEKTDEYILPKIAEKDLR 300
                    H      ++R L Q+ FQRAKLQQ CA+FF WP EKTDEYILPKIAE+DLR
Sbjct: 315 MDAYLKPKCHSADSDAVHRALAQYPFQRAKLQQICAQFFEWPLEKTDEYILPKIAERDLR 374

Query: 301 RFANLRSNTSDLGFNIPLQEVPVSCPVSGIVKHRKVQGNECYEVSWKNLDGLSSSVVPAD 360
           RF NLRS +SDLG N+PL ++PV CPVS I+KHRKVQG +CYEVSW+ LDGL +S+VP D
Sbjct: 375 RFCNLRSTSSDLGLNLPLHKMPVRCPVSKIIKHRKVQGRDCYEVSWEELDGLKTSIVPVD 434

Query: 361 LLQSACPEMIVEFEEQRAQGRKPNKCRTKTKKSE--ATVAEIDERFRTLLLEIESESRAV 420
           L++SACPE IVEFEE+RA+ +K N  +T+ KKSE  +++AEID + + LLL++E +S AV
Sbjct: 435 LVESACPEKIVEFEEERAEKKKQNHRKTRAKKSEKGSSMAEIDLKLQRLLLDMELDSSAV 494

Query: 421 RN--LSQAPIVSENSNSATGLDDLQE-------IILDVEPTIVDHAHG--TENVEVINLL 480
            N   S    +SEN  + T +D   +       I  +    I  +  G  T   EVI+LL
Sbjct: 495 HNASFSSRVEISENRTAGTEVDPTNQDPWLDPKISANCSDDISYYQVGPSTTKSEVIDLL 554

Query: 481 SPSPAIQTRKVSKFRQGNCEKIDVIDLSDTENDQSPEHERKAREL 490
           SPSP  Q+R VSKF + N + IDVIDLS++E D SPEHERKAR+L
Sbjct: 555 SPSPPRQSRIVSKFPKSNDQCIDVIDLSESETDVSPEHERKARDL 596

The following BLAST results are available for this feature:
BLAST of Carg22095 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022944807.11.8e-26190.55flap endonuclease GEN-like 2 [Cucurbita moschata][more]
XP_023541410.11.7e-25188.09flap endonuclease GEN-like 2 [Cucurbita pepo subsp. pepo][more]
XP_022968219.11.1e-25086.96flap endonuclease GEN-like 2 [Cucurbita maxima][more]
XP_022140863.12.8e-20672.37flap endonuclease GEN-like 2 [Momordica charantia][more]
XP_004140848.13.8e-19569.74PREDICTED: flap endonuclease GEN-like 2 isoform X2 [Cucumis sativus] >KGN57364.1... [more]
BLAST of Carg22095 vs. TAIR10
Match NameE-valueIdentityDescription
AT3G48900.21.7e-11242.98single-stranded DNA endonuclease family protein[more]
AT3G28030.12.3e-1637.665'-3' exonuclease family protein[more]
AT1G01880.11.5e-1534.655'-3' exonuclease family protein[more]
AT5G26680.11.5e-0722.715'-3' exonuclease family protein[more]
BLAST of Carg22095 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8W5R1|GENL2_ORYSJ8.5e-11447.28Flap endonuclease GEN-like 2 OS=Oryza sativa subsp. japonica OX=39947 GN=SEND1 P... [more]
sp|Q9M2Z3|GENL2_ARATH3.0e-11142.98Flap endonuclease GEN-like 2 OS=Arabidopsis thaliana OX=3702 GN=GEN2 PE=2 SV=2[more]
sp|Q17RS7|GEN_HUMAN4.3e-1731.79Flap endonuclease GEN homolog 1 OS=Homo sapiens OX=9606 GN=GEN1 PE=1 SV=2[more]
sp|Q8BMI4|GEN_MOUSE7.4e-1730.10Flap endonuclease GEN homolog 1 OS=Mus musculus OX=10090 GN=Gen1 PE=1 SV=2[more]
sp|P61942|FEN_NANEQ6.3e-1631.68Flap endonuclease 1 OS=Nanoarchaeum equitans (strain Kin4-M) OX=228908 GN=fen PE... [more]
BLAST of Carg22095 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L8N4|A0A0A0L8N4_CUCSA2.5e-19569.74Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G182000 PE=4 SV=1[more]
tr|A0A1S3AYA2|A0A1S3AYA2_CUCME3.5e-18968.35flap endonuclease GEN-like 2 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484071 ... [more]
tr|A0A1S3AY79|A0A1S3AY79_CUCME2.9e-18367.04flap endonuclease GEN-like 2 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484071 ... [more]
tr|A0A2I4F9S1|A0A2I4F9S1_9ROSI1.6e-16257.58flap endonuclease GEN-like 2 isoform X2 OS=Juglans regia OX=51240 GN=LOC10899682... [more]
tr|A0A2N9HZS6|A0A2N9HZS6_FAGSY1.1e-16160.19Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS45145 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0004518nuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
Vocabulary: INTERPRO
TermDefinition
IPR016197Chromo-like_dom_sf
IPR029060PIN-like_dom_sf
IPR0362795-3_exonuclease_C_sf
IPR000953Chromo/chromo_shadow_dom
IPR006086XPG-I_dom
IPR006084XPG/Rad2
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006281 DNA repair
cellular_component GO:0005575 cellular_component
molecular_function GO:0004518 nuclease activity
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg22095-RACarg22095-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006084XPG/Rad2 endonucleasePRINTSPR00853XPGRADSUPERcoord: 95..112
score: 35.42
coord: 37..56
score: 34.84
coord: 116..136
score: 37.35
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILYcoord: 237..420
IPR006084XPG/Rad2 endonucleasePANTHERPTHR11081XP-G/RAD2 DNA REPAIR ENDONUCLEASE FAMILYcoord: 1..215
IPR006086XPG-I domainSMARTSM00484xpgineucoord: 96..166
e-value: 2.9E-6
score: 36.8
IPR006086XPG-I domainPFAMPF00867XPG_Icoord: 98..162
e-value: 7.3E-13
score: 48.6
NoneNo IPR availableGENE3DG3DSA:1.10.150.20coord: 161..210
e-value: 4.8E-8
score: 34.8
NoneNo IPR availableGENE3DG3DSA:3.40.50.1010coord: 2..160
e-value: 3.7E-25
score: 90.5
NoneNo IPR availableGENE3DG3DSA:2.40.50.40coord: 302..368
e-value: 2.3E-7
score: 32.4
NoneNo IPR availablePANTHERPTHR11081:SF17FLAP ENDONUCLEASE GEN-LIKE 2coord: 1..215
coord: 237..420
NoneNo IPR availableCDDcd09900H3TH_XPG-likecoord: 158..200
e-value: 2.96587E-8
score: 49.7912
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 302..362
score: 8.938
IPR0362795'-3' exonuclease, C-terminal domain superfamilySUPERFAMILYSSF478075' to 3' exonuclease, C-terminal subdomaincoord: 158..283
IPR029060PIN-like domain superfamilySUPERFAMILYSSF88723PIN domain-likecoord: 15..169
IPR016197Chromo-like domain superfamilySUPERFAMILYSSF54160Chromo domain-likecoord: 304..360