Carg22088 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TATTTCTTAAATAAATAAATAACATAATAAAATAATCTACGTGGATAGCTTAAAATAAATATAAAAAAAAAATCCTTGGCCTTTCGGGGAAGTATCTCAAATTTGTATATATAAAAAAGAACTTCTCTTACTACTTCTACCACGAAGCTTCTAGAATTGAAATTCAATGGCCTTTCCTGGAAAAGGGCTTCGTACCTTTCCGCTTTAATTCGTATCTCGAAGCTTTTCTTTAGGGTTTGGAACTTGCCTACGATCTTTCCGGGATCTGATTTTCTTGATTCTTGTGCCTCCTCTCATGGAGGAGCCGACCGCCAAATCGACGTCTGCTGGCGCCGATTCACCGAGATCTGTGCCCACTCCTTTCTTGTCCAAAACGTATCAGCTCGTTGATGATCAGACGGTCGACCATGTCATTTCGTGGAACGACGATGGCTCTACCTTCATCGTTTGGAACACCTTGGCTTTTGCTAGAGATTTGCTCCCCAAGCATTTCAAGCATAATAACTTCACTAGCTTCCTCCGCCAGCTTAATACTTATGTAATCGATCTTCTACTGGATTTCTATTTCATTGATGTTTCCTTCTGAGGCGTGTAGTGGATGTGTTTCATTTCGGATTCTTTTTTTTTTTTTTTTGGTTTTTAGGGATTTAGAAAGGTTGTATCGGACCGGTGGGAGTTTGCGAACGAGTGCTTTCGTAAGGGCAAGAAACAGCTTCTATGTGAGATTCAGCGTCGGAAATTGACCACTCCGGTGCTGACCACTGCTTCTAACTCGGTTGTATTGACAGCCGTTGGTGCTTCGGCGATTCCGTCTACGCATCTATTGACGGGGAGTTCTTCCGGTGAAGAACAAGTGATTTCGTCGGATGTAACTCCGACGAAAGATCTTGCGGAATTGATTGATGAGAACGATAAGCTGAAAAAAGAGAAAGTTCGGCTGACGGAACAATTAACTGAGGTGAAATCCCTGTGCAACAACATCTTCTCCTTGATGTCGAGCTTCGTCGAAAACCAATTGAAGAGCAGTTGCAAAGTTAGAGAGAGCGTTTTAGCGTCGGCAAAATCGCTGGATCTTTTCCCGGTGAAGCGGCGTTCCGAAGACGACGAAGCGGCAGAGGCCACGGAAGCGGAGACGTATCAGATCGGAGCAAAGCGGCCTAGAGAATACAGGGAGGGGCCGGAAGCGGCGGAGGATGATACTACTCTGCGACTTCAACCACCGGAGAGATCGAGGGTGAAATCAGACCGGATAATTTGTGAACAGAACGTTGATAATGAGAAAACGTGGCATAATCAGGTCCACTGAGAGAGGATGGTGAAATATCTGTAATTAAAGGGCTAGGATTGAAGTATCGACTTTCAGGTTCAAGTAATCAGCGGTGCAGGGAATCATTCCTCAAATGTGGGAAAGATAGCACGTGTGGCAGCCTTTTAGGCTGAGGGGATAAATTAAGGAAATTTGAATTAAATATCAAGTGTATTTTTTGTATTTTGAAAGGAAAGAAGTAATATTTTATTTTTTAGTTTTATTATTAATCATTTTTCATATTAGCTGGAATTGTAATT TATTTCTTAAATAAATAAATAACATAATAAAATAATCTACGTGGATAGCTTAAAATAAATATAAAAAAAAAATCCTTGGCCTTTCGGGGAAGTATCTCAAATTTGTATATATAAAAAAGAACTTCTCTTACTACTTCTACCACGAAGCTTCTAGAATTGAAATTCAATGGCCTTTCCTGGAAAAGGGCTTCGTACCTTTCCGCTTTAATTCGTATCTCGAAGCTTTTCTTTAGGGTTTGGAACTTGCCTACGATCTTTCCGGGATCTGATTTTCTTGATTCTTGTGCCTCCTCTCATGGAGGAGCCGACCGCCAAATCGACGTCTGCTGGCGCCGATTCACCGAGATCTGTGCCCACTCCTTTCTTGTCCAAAACGTATCAGCTCGTTGATGATCAGACGGTCGACCATGTCATTTCGTGGAACGACGATGGCTCTACCTTCATCGTTTGGAACACCTTGGCTTTTGCTAGAGATTTGCTCCCCAAGCATTTCAAGCATAATAACTTCACTAGCTTCCTCCGCCAGCTTAATACTTATGGATTTAGAAAGGTTGTATCGGACCGGTGGGAGTTTGCGAACGAGTGCTTTCGTAAGGGCAAGAAACAGCTTCTATGTGAGATTCAGCGTCGGAAATTGACCACTCCGGTGCTGACCACTGCTTCTAACTCGGTTGTATTGACAGCCGTTGGTGCTTCGGCGATTCCGTCTACGCATCTATTGACGGGGAGTTCTTCCGGTGAAGAACAAGTGATTTCGTCGGATGTAACTCCGACGAAAGATCTTGCGGAATTGATTGATGAGAACGATAAGCTGAAAAAAGAGAAAGTTCGGCTGACGGAACAATTAACTGAGGTGAAATCCCTGTGCAACAACATCTTCTCCTTGATGTCGAGCTTCGTCGAAAACCAATTGAAGAGCAGTTGCAAAGTTAGAGAGAGCGTTTTAGCGTCGGCAAAATCGCTGGATCTTTTCCCGGTGAAGCGGCGTTCCGAAGACGACGAAGCGGCAGAGGCCACGGAAGCGGAGACGTATCAGATCGGAGCAAAGCGGCCTAGAGAATACAGGGAGGGGCCGGAAGCGGCGGAGGATGATACTACTCTGCGACTTCAACCACCGGAGAGATCGAGGGTGAAATCAGACCGGATAATTTGTGAACAGAACGTTGATAATGAGAAAACGTGGCATAATCAGGTCCACTGAGAGAGGATGGTGAAATATCTGTAATTAAAGGGCTAGGATTGAAGTATCGACTTTCAGGTTCAAGTAATCAGCGGTGCAGGGAATCATTCCTCAAATGTGGGAAAGATAGCACGTGTGGCAGCCTTTTAGGCTGAGGGGATAAATTAAGGAAATTTGAATTAAATATCAAGTGTATTTTTTGTATTTTGAAAGGAAAGAAGTAATATTTTATTTTTTAGTTTTATTATTAATCATTTTTCATATTAGCTGGAATTGTAATT ATGGAGGAGCCGACCGCCAAATCGACGTCTGCTGGCGCCGATTCACCGAGATCTGTGCCCACTCCTTTCTTGTCCAAAACGTATCAGCTCGTTGATGATCAGACGGTCGACCATGTCATTTCGTGGAACGACGATGGCTCTACCTTCATCGTTTGGAACACCTTGGCTTTTGCTAGAGATTTGCTCCCCAAGCATTTCAAGCATAATAACTTCACTAGCTTCCTCCGCCAGCTTAATACTTATGGATTTAGAAAGGTTGTATCGGACCGGTGGGAGTTTGCGAACGAGTGCTTTCGTAAGGGCAAGAAACAGCTTCTATGTGAGATTCAGCGTCGGAAATTGACCACTCCGGTGCTGACCACTGCTTCTAACTCGGTTGTATTGACAGCCGTTGGTGCTTCGGCGATTCCGTCTACGCATCTATTGACGGGGAGTTCTTCCGGTGAAGAACAAGTGATTTCGTCGGATGTAACTCCGACGAAAGATCTTGCGGAATTGATTGATGAGAACGATAAGCTGAAAAAAGAGAAAGTTCGGCTGACGGAACAATTAACTGAGGTGAAATCCCTGTGCAACAACATCTTCTCCTTGATGTCGAGCTTCGTCGAAAACCAATTGAAGAGCAGTTGCAAAGTTAGAGAGAGCGTTTTAGCGTCGGCAAAATCGCTGGATCTTTTCCCGGTGAAGCGGCGTTCCGAAGACGACGAAGCGGCAGAGGCCACGGAAGCGGAGACGTATCAGATCGGAGCAAAGCGGCCTAGAGAATACAGGGAGGGGCCGGAAGCGGCGGAGGATGATACTACTCTGCGACTTCAACCACCGGAGAGATCGAGGGTGAAATCAGACCGGATAATTTGTGAACAGAACGTTGATAATGAGAAAACGTGGCATAATCAGGTCCACTGA MEEPTAKSTSAGADSPRSVPTPFLSKTYQLVDDQTVDHVISWNDDGSTFIVWNTLAFARDLLPKHFKHNNFTSFLRQLNTYGFRKVVSDRWEFANECFRKGKKQLLCEIQRRKLTTPVLTTASNSVVLTAVGASAIPSTHLLTGSSSGEEQVISSDVTPTKDLAELIDENDKLKKEKVRLTEQLTEVKSLCNNIFSLMSSFVENQLKSSCKVRESVLASAKSLDLFPVKRRSEDDEAAEATEAETYQIGAKRPREYREGPEAAEDDTTLRLQPPERSRVKSDRIICEQNVDNEKTWHNQVH
BLAST of Carg22088 vs. NCBI nr
Match: XP_023541399.1 (heat stress transcription factor B-2a-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 565.8 bits (1457), Expect = 8.5e-158 Identity = 292/301 (97.01%), Postives = 296/301 (98.34%), Query Frame = 0
BLAST of Carg22088 vs. NCBI nr
Match: XP_022968419.1 (heat stress transcription factor B-2a-like [Cucurbita maxima]) HSP 1 Score: 545.0 bits (1403), Expect = 1.6e-151 Identity = 282/301 (93.69%), Postives = 289/301 (96.01%), Query Frame = 0
BLAST of Carg22088 vs. NCBI nr
Match: XP_022945120.1 (heat stress transcription factor B-2a-like [Cucurbita moschata]) HSP 1 Score: 535.4 bits (1378), Expect = 1.2e-148 Identity = 278/285 (97.54%), Postives = 281/285 (98.60%), Query Frame = 0
BLAST of Carg22088 vs. NCBI nr
Match: XP_008439190.1 (PREDICTED: heat stress transcription factor B-2b-like [Cucumis melo]) HSP 1 Score: 435.3 bits (1118), Expect = 1.7e-118 Identity = 230/291 (79.04%), Postives = 257/291 (88.32%), Query Frame = 0
BLAST of Carg22088 vs. NCBI nr
Match: XP_004140783.1 (PREDICTED: heat stress transcription factor B-2b-like [Cucumis sativus] >KGN57358.1 hypothetical protein Csa_3G181940 [Cucumis sativus]) HSP 1 Score: 421.0 bits (1081), Expect = 3.4e-114 Identity = 227/293 (77.47%), Postives = 253/293 (86.35%), Query Frame = 0
BLAST of Carg22088 vs. TAIR10
Match: AT5G62020.1 (heat shock transcription factor B2A) HSP 1 Score: 171.0 bits (432), Expect = 1.1e-42 Identity = 105/266 (39.47%), Postives = 153/266 (57.52%), Query Frame = 0
BLAST of Carg22088 vs. TAIR10
Match: AT4G11660.1 (winged-helix DNA-binding transcription factor family protein) HSP 1 Score: 164.5 bits (415), Expect = 1.0e-40 Identity = 72/101 (71.29%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of Carg22088 vs. TAIR10
Match: AT1G46264.1 (heat shock transcription factor B4) HSP 1 Score: 154.8 bits (390), Expect = 8.2e-38 Identity = 85/209 (40.67%), Postives = 114/209 (54.55%), Query Frame = 0
BLAST of Carg22088 vs. TAIR10
Match: AT4G36990.1 (heat shock factor 4) HSP 1 Score: 147.1 bits (370), Expect = 1.7e-35 Identity = 63/93 (67.74%), Postives = 79/93 (84.95%), Query Frame = 0
BLAST of Carg22088 vs. TAIR10
Match: AT1G32330.1 (heat shock transcription factor A1D) HSP 1 Score: 136.0 bits (341), Expect = 3.9e-32 Identity = 65/113 (57.52%), Postives = 79/113 (69.91%), Query Frame = 0
BLAST of Carg22088 vs. Swiss-Prot
Match: sp|P22335|HSF24_SOLPE (Heat shock factor protein HSF24 OS=Solanum peruvianum OX=4082 GN=HSF24 PE=2 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.4e-42 Identity = 97/195 (49.74%), Postives = 125/195 (64.10%), Query Frame = 0
BLAST of Carg22088 vs. Swiss-Prot
Match: sp|Q6Z9C8|HFB2B_ORYSJ (Heat stress transcription factor B-2b OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 1.5e-41 Identity = 75/96 (78.12%), Postives = 87/96 (90.62%), Query Frame = 0
BLAST of Carg22088 vs. Swiss-Prot
Match: sp|Q9SCW4|HFB2A_ARATH (Heat stress transcription factor B-2a OS=Arabidopsis thaliana OX=3702 GN=HSFB2A PE=2 SV=1) HSP 1 Score: 171.0 bits (432), Expect = 2.0e-41 Identity = 105/266 (39.47%), Postives = 153/266 (57.52%), Query Frame = 0
BLAST of Carg22088 vs. Swiss-Prot
Match: sp|Q9T0D3|HFB2B_ARATH (Heat stress transcription factor B-2b OS=Arabidopsis thaliana OX=3702 GN=HSFB2B PE=2 SV=1) HSP 1 Score: 164.5 bits (415), Expect = 1.9e-39 Identity = 72/101 (71.29%), Postives = 89/101 (88.12%), Query Frame = 0
BLAST of Carg22088 vs. Swiss-Prot
Match: sp|Q652B0|HFB2C_ORYSJ (Heat stress transcription factor B-2c OS=Oryza sativa subsp. japonica OX=39947 GN=HSFB2C PE=2 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.2e-39 Identity = 92/225 (40.89%), Postives = 116/225 (51.56%), Query Frame = 0
BLAST of Carg22088 vs. TrEMBL
Match: tr|A0A1S3AY57|A0A1S3AY57_CUCME (heat stress transcription factor B-2b-like OS=Cucumis melo OX=3656 GN=LOC103484061 PE=3 SV=1) HSP 1 Score: 435.3 bits (1118), Expect = 1.1e-118 Identity = 230/291 (79.04%), Postives = 257/291 (88.32%), Query Frame = 0
BLAST of Carg22088 vs. TrEMBL
Match: tr|A0A0A0L6G8|A0A0A0L6G8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G181940 PE=3 SV=1) HSP 1 Score: 421.0 bits (1081), Expect = 2.2e-114 Identity = 227/293 (77.47%), Postives = 253/293 (86.35%), Query Frame = 0
BLAST of Carg22088 vs. TrEMBL
Match: tr|A0A0F7G5V9|A0A0F7G5V9_9ROSI (Heat stress transcription factor B-2a-like protein (Fragment) OS=Betula luminifera OX=312789 GN=HsfB2a PE=2 SV=1) HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71 Identity = 163/300 (54.33%), Postives = 210/300 (70.00%), Query Frame = 0
BLAST of Carg22088 vs. TrEMBL
Match: tr|V7C2D0|V7C2D0_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_004G119600g PE=3 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.3e-71 Identity = 165/324 (50.93%), Postives = 220/324 (67.90%), Query Frame = 0
BLAST of Carg22088 vs. TrEMBL
Match: tr|A0A1S3U0J2|A0A1S3U0J2_VIGRR (heat stress transcription factor B-2a-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106760604 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 3.1e-71 Identity = 163/318 (51.26%), Postives = 212/318 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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