Carg22001 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg22001
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	RING-type E3 ubiquitin transferase
Location	Cucurbita_argyrosperma_scaffold_186 : 183590 .. 186572 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCGGATTTGTGGCCAGCGACAGCGACAGTCCACCAGATGTGGCTCTACTGGACTTTGTTCGAGATGTTGTTCGAATGTCGGCGGGGACGAACAGTCTAAAGGTTTTCAAAAAGGATTGCACCGATCTCGTGCGTCGGATCGTGCTTTTGACGCATTTGTTTCAGGAAATCAGAGACTTTAATGGCGTCCAATTTCGACCTGTTCATACATCTTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGAGTGATTCATCTCCGAGTCCGTGGCTGTGTGATTTGGTGGCGGCATTGAAGGATACTAAACGCCTTGTTTTCATCGCTTCGACTTTCCGGTCCTGCAGTTCTTCTTCTGTACGCGCTTTGTCTAATTTTCTTTCAATCTTCTGTTGGACTTCTGTTGAAATTGGGAGGGGGGAGATGAATTAGCAGCTTGAGGAATTTGAAGAGTAGTATCTCAACTTGATGGTGTTTATTATCATTTTCAGTCTCCTGCATTCATATAAAACTAAATTTCACTTCATTTTCTTCTGGTTAGTAACATAGCTTTTCCGCTTCGAAGTTGTGCTTTATGGAGCTACTGATTGAATGAACGGCCACTTGTTTCTCACGATCTCATGTTTGGTTACTGATTTTCATTCACTAGTGGTGTTAGTTTCTCTACAAAATTCGGAGGACAACTGTGATGAATTTTAACTTTGAATGCTGTGGCACCGCTTTCACATATGCTACTTTTGGATGAACTTATTATCTGTCGTGTACACGGTGTTAGTTAGACGAATCAAGAATCTAGAACGAGGAAAGACAAGATCGCTAGATTACTGGGTTATTGATCAGTGTTCATAGTTAGTTCTGTTACGATCTCCACGGCACAGGTGTTTAGTTGCAGATCGTAGCCATTTGATCATACTCGTTATTTCAAACATTGACGTTCATGAATGTTTCTAAGATGTTTGCCGATTTTCTTCTTGTTGAATCAATAATGGGATGGTGTTGATAAGTCCAAATTTACCTTTTCTGAAATTTGTCTACGTTTTAATTTTAAGGAGGAAGTTACCAGGAAGATACTCTTCCAATTCCAATGTGTGACGCTGAAGTTAGAGAATGCTTTGGGAAATCTTCCTTATGATCGCTTTGATATATCAGAGGAAGTTCAAGAACAGGTAGGATTCGACGAAAAAAAGTACGAACTAGTTTTTGACTTTTCAAATTCTGAGCATACTCTAAAATCTTCTATTGATTCTGTAGGTTGAATTAGTGAGAGCTCAGATGAGAAGAGCAGCAGAAAAATATGGCTCTCTGACCGCAATTCCTCCTTCAGTTGTTCAATCTCAGTTGCTAAAGAAAAACATGGATATGTTGAATCTGAACAACTGGGCTGATAACTTTGATGTTGAGGAGAATGGTGTTGTTGATCATGAGATTACAGTGAAATTTGATGAATTTCCAAATTGCAGAGGCTTCATGAATAATGGTGTGGATCAGCTGATTTTCGAAGGACTTGAGAAGAAACTTCCATCCTCCTCAGAGGCTTGTTCTGATGGACAGGATGCTTCTACCAAAAAGAGTGGAGATCAGGTGAAGAACTCAGATGGAGTTTCAATACCTGATGATTTTTTATGCCCCATTTCCCTGGAAATAATGAGGGATCCTGTTATTGTGTCCACAGGACAGGTATGCTTAGTTGAATTCTATGATAATGATTACTTAGATATTTCTTTTGAATTCTATTATCATTTTGGTCCTTATACTTGGAACTCACTCCATTTTAACTTTTAAAGTATAGGGACCAAAATAGAAATTTACCCTTTGATGAATTTGAGCTTAGTGTTGAAGAAACTTGGATTCTTTTATGCCTTTTCTAATAGTTCTCTTTCTAACAACACAGACCTATGAGAGATCTTATGTGCAAAGGTGGATAGATTGTGGGAATACTACTTGCCCCAAAACTCAGCAGAAACTCCAAAACTTGACTCTCACCCCAAATTATGTACTGCGAAGTCTTATTACTCAGTGGTGTGTTGATCACAATATTGAGCAACCGACAGGATTAACCAATGGAAAGATCAAAAAGTGTGATGGATCATACCGTGATGTGTGTGAGGAGATGGCAGCCATTGAAACTCTGGTGCGCAAGCTAACTAGCCATTCGATTGCGGAGCAGAGAGCTTCTGTGACTGAAATTCGATCTCTATCAAAAAGAAGCACGGATAATAGAATTCTGATAGCTGAAGCAGGAGCAATACCAAATTTGGTCAATTTGTTAACTGCTGCTGATGTTTTAATACAAGAGAATGCAGTTACTTCCATTCTCAACCTTTCAATATATGAGAACAATAAGGGACTGATTATGCTTGCTGGTGCAGTACCTTCCATTGTCCAAGTTCTGAGAGTTGGGAGCATGGAAGCGAGAGAAAATGCAGCAGCTACACTTTTCAGCTTGTCTCTTGCTGATGAAAATAGGATAATCATTGGTGCTTCTGGGGCCACTCCGGCTCTTGTGGATTTACTTGAAACTGGAAGCCCAAGAGGGAAAAAGGATGCTGCAACCGCACTATTTAATTTGTGTATCTATCAGGGGAATAAGGGAAGGGCTGTGAGGGCAGGGATCATCCCAGCTCTATTAAGGATGCTCAACGTCTCAGGTAACTCCATGGTCGACGAAGCTCTCACAATAATGTCGGTCCTGGCCAGCCATCAAGAAGCAAAAGTAGCCATGGTGAAAGCCAGTACCATACCTGTTCTAATAGATCTGCTGAGGACCGGATTGGCTCGCAACAAAGAAAATGCTGCTGCTATTTTGCTTGCTCTATGTAAACGAGATACCGACAACCTTTCTTGCATAAGTAGGCTTGGGGCTAAGATTCCGCTGACTGAGCTCTCCAAGAGCGGCACAGAGAGAGCAAAAAGGAAGGCTACCTCACTGTTGGAACATCTTGGAAAACTACAGCAGCTATAG

mRNA sequence

ATGGCCGGATTTGTGGCCAGCGACAGCGACAGTCCACCAGATGTGGCTCTACTGGACTTTGTTCGAGATGTTGTTCGAATGTCGGCGGGGACGAACAGTCTAAAGGTTTTCAAAAAGGATTGCACCGATCTCGTGCGTCGGATCGTGCTTTTGACGCATTTGTTTCAGGAAATCAGAGACTTTAATGGCGTCCAATTTCGACCTGTTCATACATCTTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGAGTGATTCATCTCCGAGTCCGTGGCTGTGTGATTTGGTGGCGGCATTGAAGGATACTAAACGCCTTGTTTTCATCGCTTCGACTTTCCGGTCCTGCAGTTCTTCTTCTGAGGAAGTTACCAGGAAGATACTCTTCCAATTCCAATGTGTGACGCTGAAGTTAGAGAATGCTTTGGGAAATCTTCCTTATGATCGCTTTGATATATCAGAGGAAGTTCAAGAACAGGTTGAATTAGTGAGAGCTCAGATGAGAAGAGCAGCAGAAAAATATGGCTCTCTGACCGCAATTCCTCCTTCAGTTGTTCAATCTCAGTTGCTAAAGAAAAACATGGATATGTTGAATCTGAACAACTGGGCTGATAACTTTGATGTTGAGGAGAATGGTGTTGTTGATCATGAGATTACAGTGAAATTTGATGAATTTCCAAATTGCAGAGGCTTCATGAATAATGGTGTGGATCAGCTGATTTTCGAAGGACTTGAGAAGAAACTTCCATCCTCCTCAGAGGCTTGTTCTGATGGACAGGATGCTTCTACCAAAAAGAGTGGAGATCAGGTGAAGAACTCAGATGGAGTTTCAATACCTGATGATTTTTTATGCCCCATTTCCCTGGAAATAATGAGGGATCCTGTTATTGTGTCCACAGGACAGACCTATGAGAGATCTTATGTGCAAAGGTGGATAGATTGTGGGAATACTACTTGCCCCAAAACTCAGCAGAAACTCCAAAACTTGACTCTCACCCCAAATTATGTACTGCGAAGTCTTATTACTCAGTGGTGTGTTGATCACAATATTGAGCAACCGACAGGATTAACCAATGGAAAGATCAAAAAGTGTGATGGATCATACCGTGATGTGTGTGAGGAGATGGCAGCCATTGAAACTCTGGTGCGCAAGCTAACTAGCCATTCGATTGCGGAGCAGAGAGCTTCTGTGACTGAAATTCGATCTCTATCAAAAAGAAGCACGGATAATAGAATTCTGATAGCTGAAGCAGGAGCAATACCAAATTTGGTCAATTTGTTAACTGCTGCTGATGTTTTAATACAAGAGAATGCAGTTACTTCCATTCTCAACCTTTCAATATATGAGAACAATAAGGGACTGATTATGCTTGCTGGTGCAGTACCTTCCATTGTCCAAGTTCTGAGAGTTGGGAGCATGGAAGCGAGAGAAAATGCAGCAGCTACACTTTTCAGCTTGTCTCTTGCTGATGAAAATAGGATAATCATTGGTGCTTCTGGGGCCACTCCGGCTCTTGTGGATTTACTTGAAACTGGAAGCCCAAGAGGGAAAAAGGATGCTGCAACCGCACTATTTAATTTGTGTATCTATCAGGGGAATAAGGGAAGGGCTGTGAGGGCAGGGATCATCCCAGCTCTATTAAGGATGCTCAACGTCTCAGGTAACTCCATGGTCGACGAAGCTCTCACAATAATGTCGGTCCTGGCCAGCCATCAAGAAGCAAAAGTAGCCATGGTGAAAGCCAGTACCATACCTGTTCTAATAGATCTGCTGAGGACCGGATTGGCTCGCAACAAAGAAAATGCTGCTGCTATTTTGCTTGCTCTATGTAAACGAGATACCGACAACCTTTCTTGCATAAGTAGGCTTGGGGCTAAGATTCCGCTGACTGAGCTCTCCAAGAGCGGCACAGAGAGAGCAAAAAGGAAGGCTACCTCACTGTTGGAACATCTTGGAAAACTACAGCAGCTATAG

Coding sequence (CDS)

ATGGCCGGATTTGTGGCCAGCGACAGCGACAGTCCACCAGATGTGGCTCTACTGGACTTTGTTCGAGATGTTGTTCGAATGTCGGCGGGGACGAACAGTCTAAAGGTTTTCAAAAAGGATTGCACCGATCTCGTGCGTCGGATCGTGCTTTTGACGCATTTGTTTCAGGAAATCAGAGACTTTAATGGCGTCCAATTTCGACCTGTTCATACATCTTGCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTGGGAGTGATTCATCTCCGAGTCCGTGGCTGTGTGATTTGGTGGCGGCATTGAAGGATACTAAACGCCTTGTTTTCATCGCTTCGACTTTCCGGTCCTGCAGTTCTTCTTCTGAGGAAGTTACCAGGAAGATACTCTTCCAATTCCAATGTGTGACGCTGAAGTTAGAGAATGCTTTGGGAAATCTTCCTTATGATCGCTTTGATATATCAGAGGAAGTTCAAGAACAGGTTGAATTAGTGAGAGCTCAGATGAGAAGAGCAGCAGAAAAATATGGCTCTCTGACCGCAATTCCTCCTTCAGTTGTTCAATCTCAGTTGCTAAAGAAAAACATGGATATGTTGAATCTGAACAACTGGGCTGATAACTTTGATGTTGAGGAGAATGGTGTTGTTGATCATGAGATTACAGTGAAATTTGATGAATTTCCAAATTGCAGAGGCTTCATGAATAATGGTGTGGATCAGCTGATTTTCGAAGGACTTGAGAAGAAACTTCCATCCTCCTCAGAGGCTTGTTCTGATGGACAGGATGCTTCTACCAAAAAGAGTGGAGATCAGGTGAAGAACTCAGATGGAGTTTCAATACCTGATGATTTTTTATGCCCCATTTCCCTGGAAATAATGAGGGATCCTGTTATTGTGTCCACAGGACAGACCTATGAGAGATCTTATGTGCAAAGGTGGATAGATTGTGGGAATACTACTTGCCCCAAAACTCAGCAGAAACTCCAAAACTTGACTCTCACCCCAAATTATGTACTGCGAAGTCTTATTACTCAGTGGTGTGTTGATCACAATATTGAGCAACCGACAGGATTAACCAATGGAAAGATCAAAAAGTGTGATGGATCATACCGTGATGTGTGTGAGGAGATGGCAGCCATTGAAACTCTGGTGCGCAAGCTAACTAGCCATTCGATTGCGGAGCAGAGAGCTTCTGTGACTGAAATTCGATCTCTATCAAAAAGAAGCACGGATAATAGAATTCTGATAGCTGAAGCAGGAGCAATACCAAATTTGGTCAATTTGTTAACTGCTGCTGATGTTTTAATACAAGAGAATGCAGTTACTTCCATTCTCAACCTTTCAATATATGAGAACAATAAGGGACTGATTATGCTTGCTGGTGCAGTACCTTCCATTGTCCAAGTTCTGAGAGTTGGGAGCATGGAAGCGAGAGAAAATGCAGCAGCTACACTTTTCAGCTTGTCTCTTGCTGATGAAAATAGGATAATCATTGGTGCTTCTGGGGCCACTCCGGCTCTTGTGGATTTACTTGAAACTGGAAGCCCAAGAGGGAAAAAGGATGCTGCAACCGCACTATTTAATTTGTGTATCTATCAGGGGAATAAGGGAAGGGCTGTGAGGGCAGGGATCATCCCAGCTCTATTAAGGATGCTCAACGTCTCAGGTAACTCCATGGTCGACGAAGCTCTCACAATAATGTCGGTCCTGGCCAGCCATCAAGAAGCAAAAGTAGCCATGGTGAAAGCCAGTACCATACCTGTTCTAATAGATCTGCTGAGGACCGGATTGGCTCGCAACAAAGAAAATGCTGCTGCTATTTTGCTTGCTCTATGTAAACGAGATACCGACAACCTTTCTTGCATAAGTAGGCTTGGGGCTAAGATTCCGCTGACTGAGCTCTCCAAGAGCGGCACAGAGAGAGCAAAAAGGAAGGCTACCTCACTGTTGGAACATCTTGGAAAACTACAGCAGCTATAG

Protein sequence

MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCSSSSSSSSSSSSSSSSGSDSSPSPWLCDLVAALKDTKRLVFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYENNKGLIMLAGAVPSIVQVLRVGSMEARENAAATLFSLSLADENRIIIGASGATPALVDLLETGSPRGKKDAATALFNLCIYQGNKGRAVRAGIIPALLRMLNVSGNSMVDEALTIMSVLASHQEAKVAMVKASTIPVLIDLLRTGLARNKENAAAILLALCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKLQQL

Homology

[Close]

BLAST of Carg22001 vs. NCBI nr
Match: XP_022943035.1 (U-box domain-containing protein 11-like [Cucurbita moschata])

HSP 1 Score: 866.7 bits (2238), Expect = 5.1e-248
Identity = 661/663 (99.70%), Postives = 661/663 (99.70%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD
Sbjct: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60

Query: 61  FNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120
           FNGVQFRPVHTSC  XXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR
Sbjct: 61  FNGVQFRPVHTSC--XXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120

Query: 121 SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKY 180
           SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKY
Sbjct: 121 SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKY 180

Query: 181 GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNN 240
           GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNN
Sbjct: 181 GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNN 240

Query: 241 GVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP 300
           GVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP
Sbjct: 241 GVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP 300

Query: 301 VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT 360
           VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT
Sbjct: 301 VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT 360

Query: 361 GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILI 420
           GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILI
Sbjct: 361 GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILI 420

Query: 421 AEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX 480
           AEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 AEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKL 660
           XXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKL
Sbjct: 601 XXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKL 660

Query: 661 QQL 664
           QQL
Sbjct: 661 QQL 661

[Close]

BLAST of Carg22001 vs. NCBI nr
Match: XP_022986708.1 (U-box domain-containing protein 11-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 837.0 bits (2161), Expect = 4.4e-239
Identity = 637/665 (95.79%), Postives = 641/665 (96.39%), Query Frame = 0


Query: 1   MAGFVA--SDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEI 60
           MAGFVA  SDSDSPPD ALLDFVRDVVRMSAGTNSLKVFKKDCTDL+RRIVLLTHLF+EI
Sbjct: 1   MAGFVASDSDSDSPPDGALLDFVRDVVRMSAGTNSLKVFKKDCTDLMRRIVLLTHLFEEI 60

Query: 61  RDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIAST 120
           RDFNGVQFRPVHTS          XXXXXXXXXX     WLCDLVAALKDTKRLVFIAST
Sbjct: 61  RDFNGVQFRPVHTS---------SXXXXXXXXXXSSPSPWLCDLVAALKDTKRLVFIAST 120

Query: 121 FRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAE 180
           FRSCSSSSEEVTRKILFQFQCVTLKLE ALGNLPYDRFDISEEVQEQVELVRAQ+RRAAE
Sbjct: 121 FRSCSSSSEEVTRKILFQFQCVTLKLEKALGNLPYDRFDISEEVQEQVELVRAQLRRAAE 180

Query: 181 KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFM 240
           KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENG VDHEITVKFDEFPNCRGF 
Sbjct: 181 KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGGVDHEITVKFDEFPNCRGFT 240

Query: 241 NNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300
           NNGVDQLIFEGLEKKLPS SEACSDGQD STKKSGDQVKNSDGVSIPDDFLCPISLEIMR
Sbjct: 241 NNGVDQLIFEGLEKKLPSFSEACSDGQDDSTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300

Query: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360
           DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ
Sbjct: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360

Query: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRI 420
           PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTE+RSLSKRSTDNRI
Sbjct: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTELRSLSKRSTDNRI 420

Query: 421 LIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX 480
           LIAEAGAIPNLVNLLTA DVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 LIAEAGAIPNLVNLLTADDVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG 660
           XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG
Sbjct: 601 XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG 656

Query: 661 KLQQL 664
           KLQQL
Sbjct: 661 KLQQL 656

[Close]

BLAST of Carg22001 vs. NCBI nr
Match: XP_022986699.1 (U-box domain-containing protein 11-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 834.7 bits (2155), Expect = 2.2e-238
Identity = 645/665 (96.99%), Postives = 649/665 (97.59%), Query Frame = 0


Query: 1   MAGFVA--SDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEI 60
           MAGFVA  SDSDSPPD ALLDFVRDVVRMSAGTNSLKVFKKDCTDL+RRIVLLTHLF+EI
Sbjct: 1   MAGFVASDSDSDSPPDGALLDFVRDVVRMSAGTNSLKVFKKDCTDLMRRIVLLTHLFEEI 60

Query: 61  RDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIAST 120
           RDFNGVQFRPVHT      XXXXXXXXXXXXXXXXXXX WLCDLVAALKDTKRLVFIAST
Sbjct: 61  RDFNGVQFRPVHT----PSXXXXXXXXXXXXXXXXXXXPWLCDLVAALKDTKRLVFIAST 120

Query: 121 FRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAE 180
           FRSCSSSSEEVTRKILFQFQCVTLKLE ALGNLPYDRFDISEEVQEQVELVRAQ+RRAAE
Sbjct: 121 FRSCSSSSEEVTRKILFQFQCVTLKLEKALGNLPYDRFDISEEVQEQVELVRAQLRRAAE 180

Query: 181 KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFM 240
           KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENG VDHEITVKFDEFPNCRGF 
Sbjct: 181 KYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGGVDHEITVKFDEFPNCRGFT 240

Query: 241 NNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300
           NNGVDQLIFEGLEKKLPS SEACSDGQD STKKSGDQVKNSDGVSIPDDFLCPISLEIMR
Sbjct: 241 NNGVDQLIFEGLEKKLPSFSEACSDGQDDSTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300

Query: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360
           DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ
Sbjct: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360

Query: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRI 420
           PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTE+RSLSKRSTDNRI
Sbjct: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTELRSLSKRSTDNRI 420

Query: 421 LIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX 480
           LIAEAGAIPNLVNLLTA DVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 LIAEAGAIPNLVNLLTADDVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG 660
           XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG
Sbjct: 601 XXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLG 660

Query: 661 KLQQL 664
           KLQQL
Sbjct: 661 KLQQL 661

[Close]

BLAST of Carg22001 vs. NCBI nr
Match: XP_022986691.1 (U-box domain-containing protein 11-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 832.4 bits (2149), Expect = 1.1e-237
Identity = 649/671 (96.72%), Postives = 653/671 (97.32%), Query Frame = 0


Query: 1   MAGFVA--SDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEI 60
           MAGFVA  SDSDSPPD ALLDFVRDVVRMSAGTNSLKVFKKDCTDL+RRIVLLTHLF+EI
Sbjct: 1   MAGFVASDSDSDSPPDGALLDFVRDVVRMSAGTNSLKVFKKDCTDLMRRIVLLTHLFEEI 60

Query: 61  RDFNGVQFRPVHT------SCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRL 120
           RDFNGVQFRPVHT        XXXXXXXXXXXXXXXXXXXXXXX WLCDLVAALKDTKRL
Sbjct: 61  RDFNGVQFRPVHTPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPWLCDLVAALKDTKRL 120

Query: 121 VFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQ 180
           VFIASTFRSCSSSSEEVTRKILFQFQCVTLKLE ALGNLPYDRFDISEEVQEQVELVRAQ
Sbjct: 121 VFIASTFRSCSSSSEEVTRKILFQFQCVTLKLEKALGNLPYDRFDISEEVQEQVELVRAQ 180

Query: 181 MRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFP 240
           +RRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENG VDHEITVKFDEFP
Sbjct: 181 LRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGGVDHEITVKFDEFP 240

Query: 241 NCRGFMNNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPI 300
           NCRGF NNGVDQLIFEGLEKKLPS SEACSDGQD STKKSGDQVKNSDGVSIPDDFLCPI
Sbjct: 241 NCRGFTNNGVDQLIFEGLEKKLPSFSEACSDGQDDSTKKSGDQVKNSDGVSIPDDFLCPI 300

Query: 301 SLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCV 360
           SLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCV
Sbjct: 301 SLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCV 360

Query: 361 DHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKR 420
           DHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTE+RSLSKR
Sbjct: 361 DHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTELRSLSKR 420

Query: 421 STDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXX 480
           STDNRILIAEAGAIPNLVNLLTA DVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXX
Sbjct: 421 STDNRILIAEAGAIPNLVNLLTADDVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATS 660
           XXXXXXXXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATS
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATS 660

Query: 661 LLEHLGKLQQL 664
           LLEHLGKLQQL
Sbjct: 661 LLEHLGKLQQL 671

[Close]

BLAST of Carg22001 vs. NCBI nr
Match: XP_023511767.1 (U-box domain-containing protein 11-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 806.6 bits (2082), Expect = 6.3e-230
Identity = 632/663 (95.32%), Postives = 637/663 (96.08%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLF+EIR+
Sbjct: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFEEIRE 60

Query: 61  FNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120
           FNGVQFRPVHTSC XXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR
Sbjct: 61  FNGVQFRPVHTSC-XXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120

Query: 121 SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKY 180
           SCSSSSEEVTRKILFQFQCVTLKLE ALGNLPYDRFDISEEVQE+VELVRAQ+RRAAEKY
Sbjct: 121 SCSSSSEEVTRKILFQFQCVTLKLEKALGNLPYDRFDISEEVQEEVELVRAQLRRAAEKY 180

Query: 181 GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNN 240
           GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGF NN
Sbjct: 181 GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFTNN 240

Query: 241 GVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP 300
           GVDQLIFEGLEKKLPS SEACSDGQD STKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP
Sbjct: 241 GVDQLIFEGLEKKLPSPSEACSDGQDDSTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDP 300

Query: 301 VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT 360
           VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT
Sbjct: 301 VIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPT 360

Query: 361 GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILI 420
           GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNR+LI
Sbjct: 361 GLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRMLI 420

Query: 421 AEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX 480
           AEAGAIP                   SILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 AEAGAIPXXXXXXXXXXXXXXXXXXXSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKL 660
           XXXXXXXXXXXXXXXCKRDTDNL CISRLGAKIPLTELSKSGTERAKRKA SLLEHLGKL
Sbjct: 601 XXXXXXXXXXXXXXXCKRDTDNLCCISRLGAKIPLTELSKSGTERAKRKAASLLEHLGKL 660

Query: 661 QQL 664
           QQL
Sbjct: 661 QQL 662

[Close]

BLAST of Carg22001 vs. TAIR10
Match: AT1G71020.1 (ARM repeat superfamily protein)

HSP 1 Score: 360.9 bits (925), Expect = 1.7e-99
Identity = 214/429 (49.88%), Postives = 271/429 (63.17%), Query Frame = 0


Query: 36  VFKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXX 95
           +FKKDC+DL RR+ LLTHL +EIRD +        +S                       
Sbjct: 27  LFKKDCSDLARRVGLLTHLIEEIRDSSPPSESDASSS------------------LNSHE 86

Query: 96  XXWLCDLVAALKDTKRLVFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDR 155
             W  DLV  L+  KRL+  A++F++   SS+   ++I FQFQCVT KLE ALG+L YDR
Sbjct: 87  CDWWSDLVVGLQAAKRLLSSATSFQA-RESSDGAAKRISFQFQCVTWKLEKALGDLTYDR 146

Query: 156 FDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVE 215
           +DIS+EV+EQVEL R Q+RRA ++YGSL +   S   S+ ++K              D  
Sbjct: 147 YDISDEVREQVELARLQLRRAMQRYGSLNSKKFSSGLSEPMEK--------------DAS 206

Query: 216 ENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEGLEKKLPSSSEAC----SDGQDASTKK 275
            N     ++  K +  P     +++  D+  FE       SS         DG D   +K
Sbjct: 207 SN----RKVIEKLESIPET---VHSLSDEKKFESPPPWKSSSVSLAFFLSKDGDDERLEK 266

Query: 276 ----SGDQVKNSDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPK 335
               + D  + SD ++IP+DFLCPISLE+M+DP IVSTGQTYERS++QRWIDCGN +CPK
Sbjct: 267 AVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPK 326

Query: 336 TQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETL 395
           TQQKL+N TLTPNYVLRSLI+QWC  HNIEQP G  NG+ K  DGS+RD+  +M+AI  L
Sbjct: 327 TQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRAL 386

Query: 396 VRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEAGAIPNLVNLLTA-ADVLIQENAVT 455
           V KL+S SI ++R +V+EIRSLSKRSTDNRILIAEAGAIP LV LLT+  D   QENAVT
Sbjct: 387 VCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVT 415

[Close]

BLAST of Carg22001 vs. TAIR10
Match: AT1G23030.1 (ARM repeat superfamily protein)

HSP 1 Score: 354.0 bits (907), Expect = 2.0e-97
Identity = 215/457 (47.05%), Postives = 279/457 (61.05%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           MAG + S +      +LLD + D+V +   T    +FKKDC DL RR+ LLTHL +EIRD
Sbjct: 1   MAGGIVSPA------SLLDLIADIVEIPLNTG---MFKKDCADLTRRVCLLTHLLEEIRD 60

Query: 61  FNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120
              +      +S                         W  DLV  L+  KRL+   ST R
Sbjct: 61  STPIDSAASSSS----------------------ENDWWSDLVVGLQAAKRLL---STAR 120

Query: 121 -SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEK 180
                SS+   ++I FQFQCVT KLE AL NLPYD +DIS+EV EQVEL R+Q+RRA ++
Sbjct: 121 FQARDSSDGAAKRISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQVELARSQLRRAMQR 180

Query: 181 YGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVE-ENGVVDHEITVKFDEFPNCRGFM 240
           YGSL +   S   S+ +++       + +++   ++ E  +     T+ F E        
Sbjct: 181 YGSLNSNKFSSALSEPMER-------DGFSNVIKIKAEEKLESVSETLHFGEXXXXXXXX 240

Query: 241 NNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300
                  I   L   L  S +A +D  D    K+ D+ K SD ++IP DFLCP+SLE+M+
Sbjct: 241 XXXXXSSI--SLAYYL--SKDADTDRLDKMVNKNTDESKKSDKLTIPVDFLCPVSLELMK 300

Query: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360
           DPVIV+TGQTYER+Y+QRWIDCGN TCPKTQQKL+N TLTPNYVLRSLI++WC +HNIEQ
Sbjct: 301 DPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQ 360

Query: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRI 420
           P G  NG+ K           +M+ I  LV++L+S S  ++R +V+EIRSLSKRSTDNRI
Sbjct: 361 PAGYINGRTKNSG--------DMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRI 404

Query: 421 LIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYE 456
           LIAEAGAIP LVNLLT+ DV  QENA+T +LNLSIYE
Sbjct: 421 LIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYE 404

[Close]

BLAST of Carg22001 vs. TAIR10
Match: AT3G46510.1 (plant U-box 13)

HSP 1 Score: 213.8 bits (543), Expect = 3.3e-55
Identity = 164/468 (35.04%), Postives = 238/468 (50.85%), Query Frame = 0


Query: 23  DVVRMSAGTNSLKV-FKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXX 82
           DVV   A  +  ++  KK C +L RR+ LL  +F+EIR+ N     P+            
Sbjct: 14  DVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESN----EPISE---------- 73

Query: 83  XXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTF-RSCSSSS--------EEVTRK 142
                              D +  L + K  +  A  + + CS  S        E+VT K
Sbjct: 74  -------------------DTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSK 133

Query: 143 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQ 202
           ++     V++KLE +L  +PY+  DIS+EV+EQVELV +Q RRA  +          V  
Sbjct: 134 LME----VSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRV--------DVSD 193

Query: 203 SQLLKKNMDMLNLNNWADNF-----------------DVEENGVVDHEITV--------K 262
            +L +    + N ++  D +                 D+ +  V  HE+           
Sbjct: 194 DELYEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGEN 253

Query: 263 FDEFPNCRGFMNNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDD 322
            +E       + + V      G E+K+  +S   S+GQ ++       V       IPDD
Sbjct: 254 IEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR--SNGQTSTAASQKIPV-------IPDD 313

Query: 323 FLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLI 382
           F CPISLE+MRDPVIVS+GQTYER+ +++WI+ G++TCPKTQQ L + TLTPNYVLRSLI
Sbjct: 314 FRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLI 373

Query: 383 TQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIR 442
            QWC  ++IE P   ++ + +K          E   IE L+ +L   +  +QR++  EIR
Sbjct: 374 AQWCEANDIEPPKPPSSLRPRKVSSFSSPA--EANKIEDLMWRLAYGNPEDQRSAAGEIR 425

Query: 443 SLSKRSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYE 456
            L+KR+ DNR+ IAEAGAIP LV LL+  D  IQE++VT++LNLSI E
Sbjct: 434 LLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICE 425

[Close]

BLAST of Carg22001 vs. TAIR10
Match: AT3G54850.1 (plant U-box 14)

HSP 1 Score: 202.2 bits (513), Expect = 9.9e-52
Identity = 155/453 (34.22%), Postives = 238/453 (52.54%), Query Frame = 0


Query: 17  LLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXX 76
           L+D V+++   S  ++S     K   DLVRRI LL+  F+E+ D N V+ +         
Sbjct: 16  LVDSVKEI---SGFSSSRGFIGKIQGDLVRRITLLSPFFEELIDVN-VELKK-------- 75

Query: 77  XXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIAS--TFRSCSSSSEEV----T 136
                                   D +    +  R+   +S   FRS +  S+       
Sbjct: 76  ------------------------DQITGF-EAMRIALDSSLELFRSVNGGSKLFQLFDR 135

Query: 137 RKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSL------- 196
             ++ +F+ +T+++E AL  +PY++ ++SEEV+EQV+L+  Q +RA E++          
Sbjct: 136 DSLVEKFRDMTVEIEAALSQIPYEKIEVSEEVREQVQLLHFQFKRAKERWEESDLQLSHD 195

Query: 197 TAIPPSVVQSQ--LLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFP-NCRGFMNN 256
            A+  +V+     +LK+    L L    D    E + +  HE  + +D  P +C   M++
Sbjct: 196 LAMAENVMDPDPIILKRLSQELQLTT-IDELKKESHAI--HEYFLSYDGDPDDCFERMSS 255

Query: 257 GVDQLI-FEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRD 316
            +  L+ F  +E   P          D ST      V       IP+ F CPISLE+M+D
Sbjct: 256 LLKNLVDFVTMESSDP----------DPST--GSRIVSRHRSPVIPEYFRCPISLELMKD 315

Query: 317 PVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQP 376
           PVIVSTGQTYERS +Q+W+D G+ TCPK+Q+ L +  LTPNYVL+SLI  WC  + IE P
Sbjct: 316 PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSLIALWCESNGIELP 375

Query: 377 TGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRIL 436
               + +  K  GS    C+    + +L+ KL + +  +QRA+  E+R L+KR+ DNR+ 
Sbjct: 376 QNQGSCRTTKIGGSSSSDCDRTFVL-SLLEKLANGTTEQQRAAAGELRLLAKRNVDNRVC 415

Query: 437 IAEAGAIPNLVNLLTAADVLIQENAVTSILNLS 453
           IAEAGAIP LV LL++ D   QE++VT++LNLS
Sbjct: 436 IAEAGAIPLLVELLSSPDPRTQEHSVTALLNLS 415

[Close]

BLAST of Carg22001 vs. TAIR10
Match: AT5G42340.1 (Plant U-Box 15)

HSP 1 Score: 176.4 bits (446), Expect = 5.8e-44
Identity = 116/327 (35.47%), Postives = 180/327 (55.05%), Query Frame = 0


Query: 133 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSL---TAIPPS 192
           ++ +F  +  KL   L   P+D   IS + +++++ +  Q+++A  +  +     A+   
Sbjct: 139 MMTRFHSIYEKLNRVLVKAPFDELMISGDAKDEIDSLCKQLKKAKRRTDTQDIELAVDMM 198

Query: 193 VVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEG 252
           VV S+   +N D   +   A   +++    +  E T+        +G +N    Q I E 
Sbjct: 199 VVFSKTDPRNADSAIIERLAKKLELQTIDDLKTE-TIAIQSLIQDKGGLNIETKQHIIEL 258

Query: 253 LEK-KLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDPVIVSTGQT 312
           L K K     EA          K+   +  S  + +P +FLCPI+LEIM DPVI++TGQT
Sbjct: 259 LNKFKKLQGLEATDILYQPVINKA---ITKSTSLILPHEFLCPITLEIMLDPVIIATGQT 318

Query: 313 YERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLTNGKIK 372
           YE+  +Q+W D G+ TCPKT+Q+L +L+L PN+ L++LI QWC  +N          KI 
Sbjct: 319 YEKESIQKWFDAGHKTCPKTRQELDHLSLAPNFALKNLIMQWCEKNNF---------KIP 378

Query: 373 KCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEAGAIPN 432
           + + S     E+   +  LV  L+S  + EQR SV ++R L++ + +NR+LIA AGAIP 
Sbjct: 379 EKEVSPDSQNEQKDEVSLLVEALSSSQLEEQRRSVKQMRLLARENPENRVLIANAGAIPL 438

Query: 433 LVNLLTAADVLIQENAVTSILNLSIYE 456
           LV LL+  D  IQENAVT++LNLSI E
Sbjct: 439 LVQLLSYPDSGIQENAVTTLLNLSIDE 452

[Close]

BLAST of Carg22001 vs. Swiss-Prot
Match: sp|Q9C9A6|PUB10_ARATH (U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.0e-98
Identity = 214/429 (49.88%), Postives = 271/429 (63.17%), Query Frame = 0


Query: 36  VFKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXX 95
           +FKKDC+DL RR+ LLTHL +EIRD +        +S                       
Sbjct: 27  LFKKDCSDLARRVGLLTHLIEEIRDSSPPSESDASSS------------------LNSHE 86

Query: 96  XXWLCDLVAALKDTKRLVFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDR 155
             W  DLV  L+  KRL+  A++F++   SS+   ++I FQFQCVT KLE ALG+L YDR
Sbjct: 87  CDWWSDLVVGLQAAKRLLSSATSFQA-RESSDGAAKRISFQFQCVTWKLEKALGDLTYDR 146

Query: 156 FDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVE 215
           +DIS+EV+EQVEL R Q+RRA ++YGSL +   S   S+ ++K              D  
Sbjct: 147 YDISDEVREQVELARLQLRRAMQRYGSLNSKKFSSGLSEPMEK--------------DAS 206

Query: 216 ENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEGLEKKLPSSSEAC----SDGQDASTKK 275
            N     ++  K +  P     +++  D+  FE       SS         DG D   +K
Sbjct: 207 SN----RKVIEKLESIPET---VHSLSDEKKFESPPPWKSSSVSLAFFLSKDGDDERLEK 266

Query: 276 ----SGDQVKNSDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPK 335
               + D  + SD ++IP+DFLCPISLE+M+DP IVSTGQTYERS++QRWIDCGN +CPK
Sbjct: 267 AVTENSDDSQKSDNLTIPEDFLCPISLELMKDPAIVSTGQTYERSFIQRWIDCGNLSCPK 326

Query: 336 TQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETL 395
           TQQKL+N TLTPNYVLRSLI+QWC  HNIEQP G  NG+ K  DGS+RD+  +M+AI  L
Sbjct: 327 TQQKLENFTLTPNYVLRSLISQWCTKHNIEQPGGYMNGRTKNSDGSFRDLSGDMSAIRAL 386

Query: 396 VRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEAGAIPNLVNLLTA-ADVLIQENAVT 455
           V KL+S SI ++R +V+EIRSLSKRSTDNRILIAEAGAIP LV LLT+  D   QENAVT
Sbjct: 387 VCKLSSQSIEDRRTAVSEIRSLSKRSTDNRILIAEAGAIPVLVKLLTSDGDTETQENAVT 415

[Close]

BLAST of Carg22001 vs. Swiss-Prot
Match: sp|Q8GUG9|PUB11_ARATH (U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2 SV=2)

HSP 1 Score: 354.0 bits (907), Expect = 3.7e-96
Identity = 215/457 (47.05%), Postives = 279/457 (61.05%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           MAG + S +      +LLD + D+V +   T    +FKKDC DL RR+ LLTHL +EIRD
Sbjct: 1   MAGGIVSPA------SLLDLIADIVEIPLNTG---MFKKDCADLTRRVCLLTHLLEEIRD 60

Query: 61  FNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120
              +      +S                         W  DLV  L+  KRL+   ST R
Sbjct: 61  STPIDSAASSSS----------------------ENDWWSDLVVGLQAAKRLL---STAR 120

Query: 121 -SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEK 180
                SS+   ++I FQFQCVT KLE AL NLPYD +DIS+EV EQVEL R+Q+RRA ++
Sbjct: 121 FQARDSSDGAAKRISFQFQCVTWKLEKALSNLPYDLYDISDEVGEQVELARSQLRRAMQR 180

Query: 181 YGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVE-ENGVVDHEITVKFDEFPNCRGFM 240
           YGSL +   S   S+ +++       + +++   ++ E  +     T+ F E        
Sbjct: 181 YGSLNSNKFSSALSEPMER-------DGFSNVIKIKAEEKLESVSETLHFGEXXXXXXXX 240

Query: 241 NNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 300
                  I   L   L  S +A +D  D    K+ D+ K SD ++IP DFLCP+SLE+M+
Sbjct: 241 XXXXXSSI--SLAYYL--SKDADTDRLDKMVNKNTDESKKSDKLTIPVDFLCPVSLELMK 300

Query: 301 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 360
           DPVIV+TGQTYER+Y+QRWIDCGN TCPKTQQKL+N TLTPNYVLRSLI++WC +HNIEQ
Sbjct: 301 DPVIVATGQTYERAYIQRWIDCGNLTCPKTQQKLENFTLTPNYVLRSLISRWCAEHNIEQ 360

Query: 361 PTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRI 420
           P G  NG+ K           +M+ I  LV++L+S S  ++R +V+EIRSLSKRSTDNRI
Sbjct: 361 PAGYINGRTKNSG--------DMSVIRALVQRLSSRSTEDRRNAVSEIRSLSKRSTDNRI 404

Query: 421 LIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYE 456
           LIAEAGAIP LVNLLT+ DV  QENA+T +LNLSIYE
Sbjct: 421 LIAEAGAIPVLVNLLTSEDVATQENAITCVLNLSIYE 404

[Close]

BLAST of Carg22001 vs. Swiss-Prot
Match: sp|Q9SNC6|PUB13_ARATH (U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 5.9e-54
Identity = 164/468 (35.04%), Postives = 238/468 (50.85%), Query Frame = 0


Query: 23  DVVRMSAGTNSLKV-FKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXX 82
           DVV   A  +  ++  KK C +L RR+ LL  +F+EIR+ N     P+            
Sbjct: 14  DVVNEIAAISDYRITVKKLCYNLARRLKLLVPMFEEIRESN----EPISE---------- 73

Query: 83  XXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTF-RSCSSSS--------EEVTRK 142
                              D +  L + K  +  A  + + CS  S        E+VT K
Sbjct: 74  -------------------DTLKTLMNLKEAMCSAKDYLKFCSQGSKIYLVMEREQVTSK 133

Query: 143 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQ 202
           ++     V++KLE +L  +PY+  DIS+EV+EQVELV +Q RRA  +          V  
Sbjct: 134 LME----VSVKLEQSLSQIPYEELDISDEVREQVELVLSQFRRAKGRV--------DVSD 193

Query: 203 SQLLKKNMDMLNLNNWADNF-----------------DVEENGVVDHEITV--------K 262
            +L +    + N ++  D +                 D+ +  V  HE+           
Sbjct: 194 DELYEDLQSLCNKSSDVDAYQPVLERVAKKLHLMEIPDLAQESVALHEMVASSGGDVGEN 253

Query: 263 FDEFPNCRGFMNNGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDD 322
            +E       + + V      G E+K+  +S   S+GQ ++       V       IPDD
Sbjct: 254 IEEMAMVLKMIKDFVQTEDDNGEEQKVGVNSR--SNGQTSTAASQKIPV-------IPDD 313

Query: 323 FLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLI 382
           F CPISLE+MRDPVIVS+GQTYER+ +++WI+ G++TCPKTQQ L + TLTPNYVLRSLI
Sbjct: 314 FRCPISLEMMRDPVIVSSGQTYERTCIEKWIEGGHSTCPKTQQALTSTTLTPNYVLRSLI 373

Query: 383 TQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIR 442
            QWC  ++IE P   ++ + +K          E   IE L+ +L   +  +QR++  EIR
Sbjct: 374 AQWCEANDIEPPKPPSSLRPRKVSSFSSPA--EANKIEDLMWRLAYGNPEDQRSAAGEIR 425

Query: 443 SLSKRSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYE 456
            L+KR+ DNR+ IAEAGAIP LV LL+  D  IQE++VT++LNLSI E
Sbjct: 434 LLAKRNADNRVAIAEAGAIPLLVGLLSTPDSRIQEHSVTALLNLSICE 425

[Close]

BLAST of Carg22001 vs. Swiss-Prot
Match: sp|A2ZLU6|SL11_ORYSI (Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 4.7e-51
Identity = 135/334 (40.42%), Postives = 195/334 (58.38%), Query Frame = 0


Query: 133 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEK--------YGSLT 192
           ++ +FQ V L+LE AL ++PY+  DIS+EV+EQVELV AQ++RA E+        Y  L 
Sbjct: 119 VMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLL 178

Query: 193 AI-----PPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMN 252
           ++      PS  +  +L +  + L+L       D+ +  +  HE+           G  +
Sbjct: 179 SVYDKNYDPS-AELAILGRLSEKLHLMTIT---DLTQESLALHEMVAS-------GGGQD 238

Query: 253 NGVDQLIFEGLEKKLPSSSEACS-DGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 312
            G        L KK+    +  + D       +  D   +S  ++IPD+F CPISLE+M+
Sbjct: 239 PGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMK 298

Query: 313 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 372
           DPVIVSTGQTYER+ +++WI  G+ TCP TQQK+    LTPNYVLRSLI+QWC  + +E 
Sbjct: 299 DPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEP 358

Query: 373 PTGLT--NGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDN 432
           P   T  N     C  S      E A I+ L+ KL S    EQR++  E+R L+KR+ +N
Sbjct: 359 PKRSTQPNKPTPACSSS------ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANN 418

Query: 433 RILIAEAGAIPNLVNLLTAADVLIQENAVTSILN 451
           RI IAEAGAIP L++LL+++D+  QE+AVT++LN
Sbjct: 419 RICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLN 435

[Close]

BLAST of Carg22001 vs. Swiss-Prot
Match: sp|Q0IMG9|SL11_ORYSJ (E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SPL11 PE=1 SV=2)

HSP 1 Score: 204.1 bits (518), Expect = 4.7e-51
Identity = 135/334 (40.42%), Postives = 195/334 (58.38%), Query Frame = 0


Query: 133 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEK--------YGSLT 192
           ++ +FQ V L+LE AL ++PY+  DIS+EV+EQVELV AQ++RA E+        Y  L 
Sbjct: 119 VMKKFQGVILQLEQALCDIPYNELDISDEVREQVELVHAQLKRAKERIDMPDDEFYNDLL 178

Query: 193 AI-----PPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMN 252
           ++      PS  +  +L +  + L+L       D+ +  +  HE+           G  +
Sbjct: 179 SVYDKNYDPS-AELAILGRLSEKLHLMTIT---DLTQESLALHEMVAS-------GGGQD 238

Query: 253 NGVDQLIFEGLEKKLPSSSEACS-DGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMR 312
            G        L KK+    +  + D       +  D   +S  ++IPD+F CPISLE+M+
Sbjct: 239 PGEHIERMSMLLKKIKDFVQTQNPDMGPPMASRVLDSNGDSRPITIPDEFRCPISLELMK 298

Query: 313 DPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQ 372
           DPVIVSTGQTYER+ +++WI  G+ TCP TQQK+    LTPNYVLRSLI+QWC  + +E 
Sbjct: 299 DPVIVSTGQTYERACIEKWIASGHHTCPTTQQKMSTSALTPNYVLRSLISQWCETNGMEP 358

Query: 373 PTGLT--NGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDN 432
           P   T  N     C  S      E A I+ L+ KL S    EQR++  E+R L+KR+ +N
Sbjct: 359 PKRSTQPNKPTPACSSS------ERANIDALLSKLCSPDTEEQRSAAAELRLLAKRNANN 418

Query: 433 RILIAEAGAIPNLVNLLTAADVLIQENAVTSILN 451
           RI IAEAGAIP L++LL+++D+  QE+AVT++LN
Sbjct: 419 RICIAEAGAIPLLLSLLSSSDLRTQEHAVTALLN 435

[Close]

BLAST of Carg22001 vs. TrEMBL
Match: tr|A0A1S3BZG4|A0A1S3BZG4_CUCME (RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495092 PE=4 SV=1)

HSP 1 Score: 716.8 bits (1849), Expect = 4.3e-203
Identity = 585/664 (88.10%), Postives = 613/664 (92.32%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           MAG VA DSD+ P +ALLDFVRDVVRMSAGTN+ ++FKKDCTDLVRRIVLLTH F+EIRD
Sbjct: 1   MAGHVAGDSDTAPALALLDFVRDVVRMSAGTNTGQLFKKDCTDLVRRIVLLTHFFEEIRD 60

Query: 61  FNGVQFRPVHT-SCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTF 120
            N +QFR +     XXXXXXXXXXXXXXX         WLCDLVAALKDTKRL+FIASTF
Sbjct: 61  SNALQFRFLDAXXXXXXXXXXXXXXXXXXTARGSSQFPWLCDLVAALKDTKRLIFIASTF 120

Query: 121 RSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEK 180
           RS  SSSEEV +KILFQFQCVT KLE ALGNLPY+R DISEEVQEQVELV+AQ+RRAAEK
Sbjct: 121 RSYGSSSEEVAKKILFQFQCVTWKLEKALGNLPYERLDISEEVQEQVELVKAQLRRAAEK 180

Query: 181 YGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMN 240
           Y SLTAIPPSVVQSQLLKKN+D+LNL NW D+ DVEENG+VDHEITVKFD FPNCRG MN
Sbjct: 181 YESLTAIPPSVVQSQLLKKNVDLLNL-NWIDSSDVEENGIVDHEITVKFDAFPNCRGLMN 240

Query: 241 NGVDQLIFEGLEKKLPSSSEACSDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRD 300
            GVDQLIF+GLE KLPS+SE  S+  + S KK GDQVKN DGV+IPDDFLCPISLEIMRD
Sbjct: 241 GGVDQLIFKGLE-KLPSASEVSSNEHNDSAKKGGDQVKNPDGVTIPDDFLCPISLEIMRD 300

Query: 301 PVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQP 360
           PVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLI+QWCV+HNIEQP
Sbjct: 301 PVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLISQWCVNHNIEQP 360

Query: 361 TGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRIL 420
           TGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSI E+RASVTE+RSLSKRSTDNRIL
Sbjct: 361 TGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIEERRASVTELRSLSKRSTDNRIL 420

Query: 421 IAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXX 480
           IAEAGAIP LVNLLT+ DVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 421 IAEAGAIPALVNLLTSDDVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGK 660
           XXXXXXXXXXXXXXXX KRDTDNLSCISRLGA IPLTEL+KSGTERAKRKATSLLEHL K
Sbjct: 601 XXXXXXXXXXXXXXXXXKRDTDNLSCISRLGAVIPLTELAKSGTERAKRKATSLLEHLRK 660

Query: 661 LQQL 664
           LQQL
Sbjct: 661 LQQL 662

[Close]

BLAST of Carg22001 vs. TrEMBL
Match: tr|A0A2N9FPC8|A0A2N9FPC8_FAGSY (RING-type E3 ubiquitin transferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20459 PE=4 SV=1)

HSP 1 Score: 459.5 bits (1181), Expect = 1.3e-125
Identity = 443/660 (67.12%), Postives = 496/660 (75.15%), Query Frame = 0


Query: 17  LLDFVRDV----VRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTS 76
           LLD VR+V    +    G N +  FKKDCTDLVRRI LLTHL +EI +F           
Sbjct: 12  LLDLVREVSGSGIACGGGGNDVS-FKKDCTDLVRRIALLTHLVEEINEFR---------- 71

Query: 77  CXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFRSCSSSSEEVTRK 136
                                    W  DLV AL+  KRL+ +A  FRS  SSS+  TR+
Sbjct: 72  --LKCDGHSLPLDASAPDDVDSASSWYSDLVVALRAAKRLLLLAGNFRS-KSSSDGATRR 131

Query: 137 ILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQ 196
           I  QFQ VT KLE AL ++PYDRF++SEEVQEQVELVR+Q+RRA E+YGSL     S   
Sbjct: 132 IASQFQSVTWKLEKALSSIPYDRFEVSEEVQEQVELVRSQLRRATERYGSLNLKTLSHAL 191

Query: 197 SQLLKKNMDMLNL-NNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEGLE 256
           +QLL + +D   L N    +  ++ NG +D+E+T K        G  + GV+ LI  G +
Sbjct: 192 AQLLDEEIDQGQLGNRVVGSLIIQNNGCIDNEVTSKLGAVTESDGSESRGVN-LIRYGSK 251

Query: 257 KKLPSS--SEAC------SDGQDASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDPVIV 316
           +   SS  SEAC      +DGQD    KS +++K  D + IPDDFLCPISLE+MRDPVIV
Sbjct: 252 RPGNSSDYSEACLANDIDADGQDNLATKSLEEIKKPDPIVIPDDFLCPISLELMRDPVIV 311

Query: 317 STGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLT 376
           +TGQTYERS++QRWID GN TCPKTQQKL+N TLTPNYVLRSLITQWCV HNIEQPTGLT
Sbjct: 312 ATGQTYERSFIQRWIDSGNATCPKTQQKLENYTLTPNYVLRSLITQWCVKHNIEQPTGLT 371

Query: 377 NGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEA 436
           NGKIKK DGS+RDV  ++AAI+ LVRKL+  ++ E+R +  EIRSLSKRSTDNRILIAE+
Sbjct: 372 NGKIKKSDGSFRDVSGDIAAIQALVRKLSCRTVEERRNAAAEIRSLSKRSTDNRILIAES 431

Query: 437 GAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 496
           GAIP LVNLLT  DVL QENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 432 GAIPILVNLLTTEDVLTQENAVTSILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXX 491

Query: 497 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 556
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 492 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 551

Query: 557 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 616
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   
Sbjct: 552 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPR 611

Query: 617 XXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELSKSGTERAKRKATSLLEHLGKLQQL 664
                       CKRD+DNL+CISRLGA IPLTEL+KSGTERAKRKATSLLEHL KLQQL
Sbjct: 612 NKENATAILLALCKRDSDNLACISRLGAVIPLTELAKSGTERAKRKATSLLEHLRKLQQL 656

[Close]

BLAST of Carg22001 vs. TrEMBL
Match: tr|A0A2P4J868|A0A2P4J868_QUESU (RING-type E3 ubiquitin transferase OS=Quercus suber OX=58331 GN=CFP56_34241 PE=4 SV=1)

HSP 1 Score: 456.8 bits (1174), Expect = 8.1e-125
Identity = 435/637 (68.29%), Postives = 489/637 (76.77%), Query Frame = 0


Query: 37  FKKDCTDLVRRIVLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXX 96
           F+KDCTDLVRRI LL HL +EIR+F     RPV  +                        
Sbjct: 33  FRKDCTDLVRRISLLAHLLEEIREFRA---RPVDDAA----------SAATSDDVDVESE 92

Query: 97  XWLCDLVAALKDTKRLVFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRF 156
            W  DLV AL+  KRL+ +A  FRS  SSS+  TR+I   FQ VT KLE AL ++PYD F
Sbjct: 93  SWSSDLVVALRAAKRLLSLAGNFRS-KSSSDGTTRRIASLFQSVTWKLEKALSSIPYDHF 152

Query: 157 DISEEVQEQVELVRAQMRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNL-NNWADNFDVE 216
           DISEEVQEQVELVR+Q+RRA E+YGSL +   S   +QLL + +D   L N    +  ++
Sbjct: 153 DISEEVQEQVELVRSQLRRATERYGSLNSKMLSRALTQLLNEEIDQGQLGNRLIRSLHIQ 212

Query: 217 ENGVVDHEITVKFDEFPNCRGFMNNGVDQLIFEGLEKKLPSS---SEAC------SDGQD 276
            NG +D E ++K    P   G  ++GV+ + ++   K+L ++   SEAC      +DGQD
Sbjct: 213 NNGSIDPEASLKMGAVPESNGSKSHGVNIISYK--SKRLGNASDHSEACIVIDIDADGQD 272

Query: 277 ASTKKSGDQVKNSDGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCP 336
            S  KS D++K  D ++IPDDFLCPISLE+MRDPVIV+TGQTYERS++QRWID GN TCP
Sbjct: 273 NSPNKSLDEIKKLDPIAIPDDFLCPISLELMRDPVIVATGQTYERSFIQRWIDSGNATCP 332

Query: 337 KTQQKLQNLTLTPNYVLRSLITQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIET 396
           KTQQKL+N TLTPNY LRSLI QWC  HNIEQPTGLTNGKIKK DGS+RDV  ++AAI  
Sbjct: 333 KTQQKLENFTLTPNYALRSLIAQWCAKHNIEQPTGLTNGKIKKSDGSFRDVSGDIAAIRA 392

Query: 397 LVRKLTSHSIAEQRASVTEIRSLSKRSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVT 456
           LVRKL+S S+ E R +  EIRSLSKRSTDNRILIAE+G IP LVNLLT+ DVL QENAVT
Sbjct: 393 LVRKLSSRSVEEHRTAAAEIRSLSKRSTDNRILIAESGGIPILVNLLTSEDVLTQENAVT 452

Query: 457 SILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 516
           SILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 453 SILNLSIYEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 512

Query: 517 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 576
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 513 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 572

Query: 577 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRDTDNLSCI 636
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX              CKRD+DNL+CI
Sbjct: 573 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRNKENAAAILLALCKRDSDNLACI 632

Query: 637 SRLGAKIPLTELSKSGTERAKRKATSLLEHLGKLQQL 664
           SRLGA IPLTEL+KSGTERAKRKATSLLEHL KLQQL
Sbjct: 633 SRLGAVIPLTELAKSGTERAKRKATSLLEHLRKLQQL 653

[Close]

BLAST of Carg22001 vs. TrEMBL
Match: tr|A0A218XP09|A0A218XP09_PUNGR (RING-type E3 ubiquitin transferase OS=Punica granatum OX=22663 GN=CDL15_Pgr011055 PE=4 SV=1)

HSP 1 Score: 452.6 bits (1163), Expect = 1.5e-123
Identity = 455/683 (66.62%), Postives = 512/683 (74.96%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLK------------VFKKDCTDLVRRI 60
           MAG VA D    P  ALL+ V+ +VR S+GT   +            +F+KDCTDLVR+I
Sbjct: 1   MAGNVAGD----PTPALLELVQHIVRDSSGTGDSQXXXXXXXXXXXDLFRKDCTDLVRKI 60

Query: 61  VLLTHLFQEIRDFNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKD 120
            LL+HLF+EIRDF G                                  W  DL +AL+ 
Sbjct: 61  SLLSHLFEEIRDFTG-----------------------GSSSRSSPEDSWWSDLASALQF 120

Query: 121 TKRLVFIASTFRSCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVEL 180
            KRL+ +AS+F + SS   E  +KI FQFQCVT KLE ALG LPY++FDIS+EVQEQVEL
Sbjct: 121 AKRLLSVASSFVAASSFDGE-AKKIAFQFQCVTWKLEKALGKLPYEQFDISDEVQEQVEL 180

Query: 181 VRAQMRRAAEKYGSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKF 240
           VRAQ++RAA+KYG + +   S   SQ   K++D++          ++  G VDHE++   
Sbjct: 181 VRAQLKRAADKYGPMNSNLLSRTMSQPALKDLDLIQSGRAIGTLHIQNIGNVDHEVSATL 240

Query: 241 DEFPNCRGFMNNGVDQLIFEGLEKKLPS---------SSEACSDGQDASTKKSGDQVKNS 300
           +  PN         D  I         S         S  + SD +D   KKS ++ K S
Sbjct: 241 NPIPNPVPSRRCPADHKIEIPTNSSTSSEVSSLDADRSDLSASDLEDNPEKKSAEENKKS 300

Query: 301 DGVSIPDDFLCPISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTP 360
           D + IPDDFLCPISLEIMRDPVIV+TGQTYERSY+QRWID GN TCPKTQQKLQNLTLTP
Sbjct: 301 DAIPIPDDFLCPISLEIMRDPVIVATGQTYERSYIQRWIDNGNLTCPKTQQKLQNLTLTP 360

Query: 361 NYVLRSLITQWCVDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQ 420
           NYVLRSLI+QWC  HN+EQPTG+ NGKIK  DGS+RD+  E+A IE LVRKL+S SI E 
Sbjct: 361 NYVLRSLISQWCSTHNVEQPTGIVNGKIKNSDGSFRDISSEIATIEALVRKLSSCSIEEI 420

Query: 421 RASVTEIRSLSKRSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYEXXXX 480
            A+VTEIRSLSKRSTDNRILIAEAGAIP LV+LLT+ DVLIQENAVTSILNLSIYEXXXX
Sbjct: 421 TAAVTEIRSLSKRSTDNRILIAEAGAIPPLVHLLTSVDVLIQENAVTSILNLSIYEXXXX 480

Query: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 481 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 540

Query: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 541 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 600

Query: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRDTDNLSCISRLGAKIPLTELS 660
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRD+DNL CISRLGA IPLTEL+
Sbjct: 601 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCKRDSDNLGCISRLGASIPLTELA 655

Query: 661 KSGTERAKRKATSLLEHLGKLQQ 663
           ++GTERAKRKATSLL+ L KL +
Sbjct: 661 RNGTERAKRKATSLLDLLHKLHK 655

[Close]

BLAST of Carg22001 vs. TrEMBL
Match: tr|A0A2P5FK65|A0A2P5FK65_9ROSA (RING-type E3 ubiquitin transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_060180 PE=4 SV=1)

HSP 1 Score: 445.7 bits (1145), Expect = 1.9e-121
Identity = 274/464 (59.05%), Postives = 338/464 (72.84%), Query Frame = 0


Query: 1   MAGFVASDSDSPPDVALLDFVRDVVRMSAGTNSLKVFKKDCTDLVRRIVLLTHLFQEIRD 60
           +AG  A    SP ++ LL  V DVV +S G     VFKKDCTDLVRRI LLTHLF+E+R+
Sbjct: 9   LAGDGADHRHSPVELLLLKLVNDVVLVSVGGG---VFKKDCTDLVRRIALLTHLFEEMRE 68

Query: 61  FNGVQFRPVHTSCXXXXXXXXXXXXXXXXXXXXXXXXWLCDLVAALKDTKRLVFIASTFR 120
             G +  P+        XXXXXXXXXXXXXXXXXXXXW  DL+ AL+  K L+ + + F 
Sbjct: 69  LKG-ELPPLDA------XXXXXXXXXXXXXXXXXXXXWASDLMVALQAAKCLLLLVAKFH 128

Query: 121 SCSSSSEEVTRKILFQFQCVTLKLENALGNLPYDRFDISEEVQEQVELVRAQMRRAAEKY 180
           S +  ++  T+KI FQFQCVT KLE AL NLPYD FDISEEV+EQVELVRAQ+RRA E+Y
Sbjct: 129 SENVPTDGATKKIAFQFQCVTWKLEKALANLPYDHFDISEEVKEQVELVRAQLRRATERY 188

Query: 181 GSLTAIPPSVVQSQLLKKNMDMLNLNNWADNFDVEENGVVDHEITVKFDEFPNCRGFMNN 240
           G + +       SQ ++K +  +     A++  +E+NG +D+++TVK D       F+ +
Sbjct: 189 GCMNSKKMLFHLSQPMEKEI-QVESEKRANDLPLEKNG-IDNKVTVKLDRLLRSDSFVVH 248

Query: 241 GVDQLIFE-GLEKKLPSSSEACS------DGQDASTKK--SGDQVKNSDGVSIPDDFLCP 300
            VD+   +  + +K  S+ E CS      +GQ++   K     ++K  + + IPDD+LCP
Sbjct: 249 NVDETSNKTEILRKSCSTPEFCSTNDNDGEGQESPDNKGAGAGEIKKREVIVIPDDYLCP 308

Query: 301 ISLEIMRDPVIVSTGQTYERSYVQRWIDCGNTTCPKTQQKLQNLTLTPNYVLRSLITQWC 360
           ISLE+MRDPVIV+TGQTYERSY+QRWIDCGN TCPKTQQKL+NLTLTPNYVLRSLI QWC
Sbjct: 309 ISLELMRDPVIVATGQTYERSYIQRWIDCGNKTCPKTQQKLENLTLTPNYVLRSLINQWC 368

Query: 361 VDHNIEQPTGLTNGKIKKCDGSYRDVCEEMAAIETLVRKLTSHSIAEQRASVTEIRSLSK 420
           V HNIEQPTGLTNGK+K+ DGS+RDV  +++AIE LVRKL+S SI E+RA+ TEIRSLSK
Sbjct: 369 VKHNIEQPTGLTNGKMKRSDGSFRDVSGDISAIEALVRKLSSRSIEERRAAATEIRSLSK 428

Query: 421 RSTDNRILIAEAGAIPNLVNLLTAADVLIQENAVTSILNLSIYE 456
           RSTDNRILIAEAGAIP LVNLLT+ DV  QENAVTSILNLSIYE
Sbjct: 429 RSTDNRILIAEAGAIPILVNLLTSDDVTTQENAVTSILNLSIYE 460

The following BLAST results are available for this feature:

BLAST of Carg22001 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022943035.1	5.1e-248	99.70	U-box domain-containing protein 11-like [Cucurbita moschata]	[more]
XP_022986708.1	4.4e-239	95.79	U-box domain-containing protein 11-like isoform X3 [Cucurbita maxima]	[more]
XP_022986699.1	2.2e-238	96.99	U-box domain-containing protein 11-like isoform X2 [Cucurbita maxima]	[more]
XP_022986691.1	1.1e-237	96.72	U-box domain-containing protein 11-like isoform X1 [Cucurbita maxima]	[more]
XP_023511767.1	6.3e-230	95.32	U-box domain-containing protein 11-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg22001 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G71020.1	1.7e-99	49.88	ARM repeat superfamily protein	[more]
AT1G23030.1	2.0e-97	47.05	ARM repeat superfamily protein	[more]
AT3G46510.1	3.3e-55	35.04	plant U-box 13	[more]
AT3G54850.1	9.9e-52	34.22	plant U-box 14	[more]
AT5G42340.1	5.8e-44	35.47	Plant U-Box 15	[more]

BLAST of Carg22001 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9C9A6\|PUB10_ARATH	3.0e-98	49.88	U-box domain-containing protein 10 OS=Arabidopsis thaliana OX=3702 GN=PUB10 PE=2...	[more]
sp\|Q8GUG9\|PUB11_ARATH	3.7e-96	47.05	U-box domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=PUB11 PE=2...	[more]
sp\|Q9SNC6\|PUB13_ARATH	5.9e-54	35.04	U-box domain-containing protein 13 OS=Arabidopsis thaliana OX=3702 GN=PUB13 PE=1...	[more]
sp\|A2ZLU6\|SL11_ORYSI	4.7e-51	40.42	Protein spotted leaf 11 OS=Oryza sativa subsp. indica OX=39946 GN=SPL11 PE=1 SV=...	[more]
sp\|Q0IMG9\|SL11_ORYSJ	4.7e-51	40.42	E3 ubiquitin-protein ligase SPL11 OS=Oryza sativa subsp. japonica OX=39947 GN=SP...	[more]

BLAST of Carg22001 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BZG4\|A0A1S3BZG4_CUCME	4.3e-203	88.10	RING-type E3 ubiquitin transferase OS=Cucumis melo OX=3656 GN=LOC103495092 PE=4 ...	[more]
tr\|A0A2N9FPC8\|A0A2N9FPC8_FAGSY	1.3e-125	67.12	RING-type E3 ubiquitin transferase OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20459...	[more]
tr\|A0A2P4J868\|A0A2P4J868_QUESU	8.1e-125	68.29	RING-type E3 ubiquitin transferase OS=Quercus suber OX=58331 GN=CFP56_34241 PE=4...	[more]
tr\|A0A218XP09\|A0A218XP09_PUNGR	1.5e-123	66.62	RING-type E3 ubiquitin transferase OS=Punica granatum OX=22663 GN=CDL15_Pgr01105...	[more]
tr\|A0A2P5FK65\|A0A2P5FK65_9ROSA	1.9e-121	59.05	RING-type E3 ubiquitin transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_06...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005488	binding
GO:0005515	protein binding
GO:0004842	ubiquitin-protein transferase activity

Vocabulary: **Biological Process**
Term	Definition
GO:0016567	protein ubiquitination

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR013083	Znf_RING/FYVE/PHD
IPR011989	ARM-like
IPR000225	Armadillo
IPR003613	Ubox_domain

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0004842	ubiquitin-protein transferase activity
molecular_function	GO:0005488	binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg22001-RA	Carg22001-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 159..179
None	No IPR available	GENE3D	G3DSA:1.25.10.110		coord: 478..561 e-value: 2.1E-15 score: 58.9 coord: 356..477 e-value: 1.5E-16 score: 62.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..279
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 257..279
None	No IPR available	PANTHER	PTHR23315	BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING	coord: 15..662
None	No IPR available	PANTHER	PTHR23315:SF52	U-BOX DOMAIN-CONTAINING PROTEIN 10-RELATED	coord: 15..662
None	No IPR available	CDD	cd16664	RING-Ubox_PUB	coord: 288..330 e-value: 1.40399E-25 score: 99.2302
None	No IPR available	SUPERFAMILY	SSF57850	RING/U-box	coord: 278..358
IPR003613	U box domain	SMART	SM00504	Ubox_2	coord: 287..350 e-value: 6.9E-30 score: 115.3
IPR003613	U box domain	PFAM	PF04564	U-box	coord: 284..355 e-value: 1.1E-19 score: 70.2
IPR003613	U box domain	PROSITE	PS51698	U_BOX	coord: 283..357 score: 44.274
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 495..535 e-value: 2.0E-4 score: 30.7 coord: 413..453 e-value: 0.012 score: 24.7 coord: 577..617 e-value: 51.0 score: 7.7 coord: 536..576 e-value: 9.0 score: 13.6 coord: 454..494 e-value: 5.0 score: 15.6
IPR000225	Armadillo	PFAM	PF00514	Arm	coord: 414..452 e-value: 1.9E-6 score: 27.6 coord: 496..534 e-value: 2.1E-7 score: 30.6
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 465..507 score: 9.187
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 424..466 score: 11.322
IPR011989	Armadillo-like helical	GENE3D	G3DSA:1.25.10.10		coord: 562..662 e-value: 4.2E-13 score: 50.7
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	G3DSA:3.30.40.10		coord: 283..355 e-value: 3.0E-27 score: 96.5
IPR016024	Armadillo-type fold	SUPERFAMILY	SSF48371	ARM repeat	coord: 374..657

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg22001	Cla003913	Watermelon (97103) v1	carwmB0169
Carg22001	CsaUNG017140	Cucumber (Chinese Long) v2	carcuB0197
Carg22001	MELO3C018328	Melon (DHL92) v3.5.1	carmeB0183
Carg22001	ClCG07G006340	Watermelon (Charleston Gray)	carwcgB0171
Carg22001	ClCG01G006100	Watermelon (Charleston Gray)	carwcgB0170
Carg22001	CSPI04G27790	Wild cucumber (PI 183967)	carcpiB0204
Carg22001	CmaCh04G009970	Cucurbita maxima (Rimu)	carcmaB0243
Carg22001	CmaCh04G000540	Cucurbita maxima (Rimu)	carcmaB0242
Carg22001	CmoCh04G010750	Cucurbita moschata (Rifu)	carcmoB0251
Carg22001	CmoCh04G000470	Cucurbita moschata (Rifu)	carcmoB0250
Carg22001	Lsi04G011430	Bottle gourd (USVL1VR-Ls)	carlsiB159
Carg22001	Cp4.1LG01g06310	Cucurbita pepo (Zucchini)	carcpeB0258
Carg22001	Cp4.1LG01g07650	Cucurbita pepo (Zucchini)	carcpeB0259
Carg22001	CsGy5G010240	Cucumber (Gy14) v2	carcgybB0191
Carg22001	MELO3C018328.2	Melon (DHL92) v3.6.1	carmedB0187
Carg22001	CsaV3_5G013610	Cucumber (Chinese Long) v3	carcucB0207
Carg22001	Cla97C07G134250	Watermelon (97103) v2	carwmbB0183
Carg22001	Bhi07G000279	Wax gourd	carwgoB0228

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg22001	Carg00111	Silver-seed gourd	carcarB214

The following block(s) are covering this gene:


Gene	Organism	Block
Carg22001	Cucumber (Gy14) v2	carcgybB0193
Carg22001	Cucurbita maxima (Rimu)	carcmaB0244
Carg22001	Cucurbita moschata (Rifu)	carcmoB0252
Carg22001	Cucumber (Chinese Long) v2	carcuB0200
Carg22001	Cucumber (Chinese Long) v3	carcucB0205
Carg22001	Melon (DHL92) v3.5.1	carmeB0182
Carg22001	Melon (DHL92) v3.6.1	carmedB0186
Carg22001	Watermelon (97103) v1	carwmB0168