Carg21987 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21987
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Nascent polypeptide-associated complex subunit beta
Location	Cucurbita_argyrosperma_scaffold_186 : 117509 .. 119697 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGCAAGATAATATCAGGGAGAAACAGATGGTGAGAGTTGCTTCTGATAGAGGAACTGGACGTCGTTTACCGCAGTGGATGCTGGGAGTTCGTGCTGATGACCAAATACAGAGATCTAATGATGTAGATAACAACAAGAAGAGTCTTGAGGAAGAACTTGAATCTCAAGCTTCCCTAGCCAAGGAAGGAAATTCATTTAAGCGTCCTCAAAAATCTGTGTTACACCAACAGAAAGAGACTTTGGTGGAAGATTTATGCACCCCAGAATGTGTTTCTAAGAAAAGAAAGGGAAGAAAACGAAAATCAAGTCGAATTGATGAGGCTGAGGATGCTGATGACCCTGAGGCAGTCCCAGCTATGAAATCAAATAGACTTAGAAGGAAGCTTGTGGACTCTGCTTTGGGAAAAAGAAAAACACCAAAAAACCTGGGCACCAGAAGTGATGATGATATGGAACTGACAGTGGAAGATCTAATAGTCATTGCCAAAGAGGTTAGCCACTTTACCCTCTCTTGCATATAAAAGAAGACAACTTTATTTTCTTTCGATTCCAAGTAGTAATCAAGTCATGCTATGCCTAACGTTATTGTATGATTGTATGATAAGAGGATGACAGATACTTGAGATATAATGATTTCGTCTTTTGTTTTTTGTTTATGAATTTTATGTTGGTTTCTCCACAATTTCTTTACTATGATTTTCATGTTTCTTGAAAAAACATCTGAAGTCTCCGTTAAATTCAAAAAGCAAAAACAAGTTTGTAAAAACTACTCATTTGTAGTTTTTTAAAACATTTGCTGAAAGTTTTTTTTCTTTTTTTTTTTTCTTAAATTTACAACTTCATTGGTTGAAGGTAATTAACAAAACAAAGAAGCTTAGAGGTGGAAGTAGTTTTTAAGTTTTTATACGCTTAGATTTCATTTGATAATCATTTGGTTTTCTTGAAATTGAATTCTTAGTCAAATTCCAAAACAAAGCATGTTTTTGAAATTATCTTTCTTATTTTTCAAAAAAACAAAAACAAAATTTTGAAAACATGTTTGGTGTACAACTATGTATGCTTTTAATATACTGTCCACTAGTTTTCAGGGATATAATTATTTTCATTTGCATGCAGTTTGTTGAAACTGACAACTTGTTTTCAGAGATAATTATTTTCATTTGCATGCAGTATGTTGAAGCTGATAAGGATAGGGCCCATAAACACGAATTACATGGAGAACGTGAATCTAGTAGCATAAATCCAAGAACATGCCACGCCAGGAATCAATCTGAAGGATCTTTCAATACTAATAATGATAAGAAGCAGAGTTCTGTGGATCTTAGTACTTCAATTCCTCATGATTCAACTGCAATTTCAGGTGGTGAAAAGATTGATATAGGTGTGAGGACAACGGGAGATCCTGCTAAGGACATGCTGAATTTATTTCTGGGTCCTTTGCTTAAGAAGTCTGTAGAGAATGAGAAACCCAAATTTGTTACAACTGATGCACAATTTTCTTGTGATTTAAAGAGACAAAATCAAAGGCATAATGAAAATGTTGGAGATGTGGTCTCAGTAATGAAGAAGAAGAGCAGCCTGAAAGATAAGGTAGCAATGTTTCTTGGATAAAGCAGATATATCTGACACCGTGATGTTTCAGGATGTCAAGATGTTTCTTGATACGGAATAATTGAACTTCAAGGTGGTGATCCTTGCAGTTATCAGTGATATCATCAAGATGATGAATATGAGGTATGCATCTTTCACTTGTTTGCCACTAGTTACATTTTGTTTCATATATGAGAGGAAAGGAAAGAAGGTTTAGAGTTGGTATGAATTTAGTTCTTTTATGTATTTGAGTTAGCTAAATTTTGATGTTTGTTGTTGGGTCTTTGTAGGAACTTAATTGGGGTGGATTTATTTGAAGACATGTTCGTTTGCTTCCCCCATTTTCCCTCATGGATTTAATTGAGGTCGTGGACACTGTTCATGAGGTTGTAATACTACTTTTCACTGTTTTTTTTTATAATTATTATTTTTTTAAAAAAAAAAAATTTAAACGAGCAAACTGACACCTCCAAATAATACAAGTTTCAGGTCACACAGCATTGAGGCTGAAGAATATGTGTAAGAAGACCTTTGGATGGAATCCACATTGTTGATTTTTAATTGAATTTATTGGATGAATGTTTAAATGTCATCC

mRNA sequence

ATGGCGCAAGATAATATCAGGGAGAAACAGATGGTGAGAGTTGCTTCTGATAGAGGAACTGGACGTCGTTTACCGCAGTGGATGCTGGGAGTTCGTGCTGATGACCAAATACAGAGATCTAATGATGTAGATAACAACAAGAAGAGTCTTGAGGAAGAACTTGAATCTCAAGCTTCCCTAGCCAAGGAAGGAAATTCATTTAAGCGTCCTCAAAAATCTGTGTTACACCAACAGAAAGAGACTTTGGTGGAAGATTTATGCACCCCAGAATGTGTTTCTAAGAAAAGAAAGGGAAGAAAACGAAAATCAAGTCGAATTGATGAGGCTGAGGATGCTGATGACCCTGAGGCAGTCCCAGCTATGAAATCAAATAGACTTAGAAGGAAGCTTGTGGACTCTGCTTTGGGAAAAAGAAAAACACCAAAAAACCTGGGCACCAGAAGTGATGATGATATGGAACTGACAGTGGAAGATCTAATAGTCATTGCCAAAGAGTATGTTGAAGCTGATAAGGATAGGGCCCATAAACACGAATTACATGGAGAACGTGAATCTAGTAGCATAAATCCAAGAACATGCCACGCCAGGAATCAATCTGAAGGATCTTTCAATACTAATAATGATAAGAAGCAGAGTTCTGTGGATCTTAGTACTTCAATTCCTCATGATTCAACTGCAATTTCAGGTGGTGAAAAGATTGATATAGGTGTGAGGACAACGGGAGATCCTGCTAAGGACATGCTGAATTTATTTCTGGGTCCTTTGCTTAAGAAGTCTGTAGAGAATGAGAAACCCAAATTTGTTACAACTGATGCACAATTTTCTTGTGATTTAAAGAGACAAAATCAAAGGCATAATGAAAATGTTGGAGATGTGGTCTCAGTAATGAAGAAGAAGAGCAGCCTGAAAGATAAGGAACTTAATTGGGGTGGATTTATTTGAAGACATGTTCGTTTGCTTCCCCCATTTTCCCTCATGGATTTAATTGAGGTCGTGGACACTGTTCATGAGGTCACACAGCATTGAGGCTGAAGAATATGTGTAAGAAGACCTTTGGATGGAATCCACATTGTTGATTTTTAATTGAATTTATTGGATGAATGTTTAAATGTCATCC

Coding sequence (CDS)

ATGGCGCAAGATAATATCAGGGAGAAACAGATGGTGAGAGTTGCTTCTGATAGAGGAACTGGACGTCGTTTACCGCAGTGGATGCTGGGAGTTCGTGCTGATGACCAAATACAGAGATCTAATGATGTAGATAACAACAAGAAGAGTCTTGAGGAAGAACTTGAATCTCAAGCTTCCCTAGCCAAGGAAGGAAATTCATTTAAGCGTCCTCAAAAATCTGTGTTACACCAACAGAAAGAGACTTTGGTGGAAGATTTATGCACCCCAGAATGTGTTTCTAAGAAAAGAAAGGGAAGAAAACGAAAATCAAGTCGAATTGATGAGGCTGAGGATGCTGATGACCCTGAGGCAGTCCCAGCTATGAAATCAAATAGACTTAGAAGGAAGCTTGTGGACTCTGCTTTGGGAAAAAGAAAAACACCAAAAAACCTGGGCACCAGAAGTGATGATGATATGGAACTGACAGTGGAAGATCTAATAGTCATTGCCAAAGAGTATGTTGAAGCTGATAAGGATAGGGCCCATAAACACGAATTACATGGAGAACGTGAATCTAGTAGCATAAATCCAAGAACATGCCACGCCAGGAATCAATCTGAAGGATCTTTCAATACTAATAATGATAAGAAGCAGAGTTCTGTGGATCTTAGTACTTCAATTCCTCATGATTCAACTGCAATTTCAGGTGGTGAAAAGATTGATATAGGTGTGAGGACAACGGGAGATCCTGCTAAGGACATGCTGAATTTATTTCTGGGTCCTTTGCTTAAGAAGTCTGTAGAGAATGAGAAACCCAAATTTGTTACAACTGATGCACAATTTTCTTGTGATTTAAAGAGACAAAATCAAAGGCATAATGAAAATGTTGGAGATGTGGTCTCAGTAATGAAGAAGAAGAGCAGCCTGAAAGATAAGGAACTTAATTGGGGTGGATTTATTTGA

Protein sequence

MAQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKSSLKDKELNWGGFI

Homology

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BLAST of Carg21987 vs. NCBI nr
Match: XP_022941671.1 (uncharacterized protein LOC111446962 isoform X1 [Cucurbita moschata] >XP_022941672.1 uncharacterized protein LOC111446962 isoform X1 [Cucurbita moschata])

HSP 1 Score: 575.1 bits (1481), Expect = 1.5e-160
Identity = 299/305 (98.03%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MAQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL 60
           MAQDNIREKQMVRVASD GTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL
Sbjct: 18  MAQDNIREKQMVRVASDGGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL 77

Query: 61  AKEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 120
           AKE NSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA
Sbjct: 78  AKEANSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 137

Query: 121 MKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 180
           MKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH
Sbjct: 138 MKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 197

Query: 181 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 240
           GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT
Sbjct: 198 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 257

Query: 241 GDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKS 300
           GDPAKDMLNLFLGPLLKKSVENE+PKFVTTD QFSCDLK QNQRHNENVGDV+SVMKKKS
Sbjct: 258 GDPAKDMLNLFLGPLLKKSVENEQPKFVTTDVQFSCDLKSQNQRHNENVGDVISVMKKKS 317

Query: 301 SLKDK 306
           SLKDK
Sbjct: 318 SLKDK 322

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BLAST of Carg21987 vs. NCBI nr
Match: XP_023525842.1 (uncharacterized protein LOC111789338 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023525851.1 uncharacterized protein LOC111789338 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 565.8 bits (1457), Expect = 8.8e-158
Identity = 295/305 (96.72%), Postives = 299/305 (98.03%), Query Frame = 0


Query: 1   MAQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL 60
           MAQDNIREK+MVRVASD GTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL
Sbjct: 1   MAQDNIREKEMVRVASDGGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL 60

Query: 61  AKEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 120
           AKE NSFKRPQKSVLHQQKETLVE+LCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA
Sbjct: 61  AKEANSFKRPQKSVLHQQKETLVENLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 120

Query: 121 MKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 180
           MKSNRLRRKLVDSALGKRK PKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH
Sbjct: 121 MKSNRLRRKLVDSALGKRKIPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 180

Query: 181 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 240
           GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT
Sbjct: 181 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 240

Query: 241 GDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKS 300
           GDPAKDMLNLFLGPLLKKSVENE+PKF TTD QFSCDLK QNQR+NENVGDVVSVMKKKS
Sbjct: 241 GDPAKDMLNLFLGPLLKKSVENEQPKFFTTDVQFSCDLKSQNQRYNENVGDVVSVMKKKS 300

Query: 301 SLKDK 306
           SLKDK
Sbjct: 301 SLKDK 305

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BLAST of Carg21987 vs. NCBI nr
Match: XP_022985336.1 (uncharacterized protein LOC111483374 isoform X1 [Cucurbita maxima])

HSP 1 Score: 561.6 bits (1446), Expect = 1.7e-156
Identity = 293/305 (96.07%), Postives = 296/305 (97.05%), Query Frame = 0


Query: 1   MAQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASL 60
           MAQDNIREKQMVRVASD GTGRRLPQWMLGVRADDQ+QRSNDVDN+KKSLEEELESQASL
Sbjct: 1   MAQDNIREKQMVRVASDGGTGRRLPQWMLGVRADDQVQRSNDVDNDKKSLEEELESQASL 60

Query: 61  AKEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 120
           AKE NSFKRPQKSVLHQQKETLVED CTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA
Sbjct: 61  AKEANSFKRPQKSVLHQQKETLVEDFCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA 120

Query: 121 MKSNRLRRKLVDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 180
           MKSNRLRRKLVDSALGKRK PKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH
Sbjct: 121 MKSNRLRRKLVDSALGKRKAPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 180

Query: 181 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 240
           GERES SINPRTCHARNQSEGSFNTNND KQSSVDLSTSIP DSTAISGGEKIDIGVRTT
Sbjct: 181 GERESCSINPRTCHARNQSEGSFNTNNDNKQSSVDLSTSIPLDSTAISGGEKIDIGVRTT 240

Query: 241 GDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKS 300
           GDPAKDMLNLFLGPLLKKSVENE+PKFVTTD QFSCDLK QNQRHNENVGDVVSVMKKKS
Sbjct: 241 GDPAKDMLNLFLGPLLKKSVENEQPKFVTTDVQFSCDLKSQNQRHNENVGDVVSVMKKKS 300

Query: 301 SLKDK 306
           SLKDK
Sbjct: 301 SLKDK 305

[Close]

BLAST of Carg21987 vs. NCBI nr
Match: XP_022941673.1 (uncharacterized protein LOC111446962 isoform X2 [Cucurbita moschata])

HSP 1 Score: 556.2 bits (1432), Expect = 7.0e-155
Identity = 289/295 (97.97%), Postives = 291/295 (98.64%), Query Frame = 0


Query: 11  MVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEGNSFKRP 70
           MVRVASD GTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKE NSFKRP
Sbjct: 1   MVRVASDGGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEANSFKRP 60

Query: 71  QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL 130
           QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL
Sbjct: 61  QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL 120

Query: 131 VDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP 190
           VDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP
Sbjct: 121 VDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP 180

Query: 191 RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL 250
           RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL
Sbjct: 181 RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL 240

Query: 251 FLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKSSLKDK 306
           FLGPLLKKSVENE+PKFVTTD QFSCDLK QNQRHNENVGDV+SVMKKKSSLKDK
Sbjct: 241 FLGPLLKKSVENEQPKFVTTDVQFSCDLKSQNQRHNENVGDVISVMKKKSSLKDK 295

[Close]

BLAST of Carg21987 vs. NCBI nr
Match: XP_023525859.1 (uncharacterized protein LOC111789338 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 548.1 bits (1411), Expect = 1.9e-152
Identity = 286/295 (96.95%), Postives = 289/295 (97.97%), Query Frame = 0


Query: 11  MVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEGNSFKRP 70
           MVRVASD GTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKE NSFKRP
Sbjct: 1   MVRVASDGGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEANSFKRP 60

Query: 71  QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL 130
           QKSVLHQQKETLVE+LCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL
Sbjct: 61  QKSVLHQQKETLVENLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL 120

Query: 131 VDSALGKRKTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP 190
           VDSALGKRK PKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP
Sbjct: 121 VDSALGKRKIPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINP 180

Query: 191 RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL 250
           RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL
Sbjct: 181 RTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNL 240

Query: 251 FLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKSSLKDK 306
           FLGPLLKKSVENE+PKF TTD QFSCDLK QNQR+NENVGDVVSVMKKKSSLKDK
Sbjct: 241 FLGPLLKKSVENEQPKFFTTDVQFSCDLKSQNQRYNENVGDVVSVMKKKSSLKDK 295

[Close]

BLAST of Carg21987 vs. TrEMBL
Match: tr|A0A1S3BYS7|A0A1S3BYS7_CUCME (uncharacterized protein LOC103495060 OS=Cucumis melo OX=3656 GN=LOC103495060 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 8.0e-107
Identity = 213/304 (70.07%), Postives = 246/304 (80.92%), Query Frame = 0


Query: 11  MVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEGNSFKRP 70
           MVRVASD GTGRRLPQWMLGVRAD+Q+QR+ND +NNKK LEEEL+SQASLAKE NS +  
Sbjct: 1   MVRVASDGGTGRRLPQWMLGVRADNQVQRTNDAENNKKGLEEELDSQASLAKEANSVRCH 60

Query: 71  QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKL 130
            KSVLHQQKE L++D C  +C SK+RKGRK K S+ID A+D  D EAVPA KSNR+RRK 
Sbjct: 61  PKSVLHQQKEALMDDSCILQCESKRRKGRKLKPSQIDAAKDGHDAEAVPAKKSNRVRRKP 120

Query: 131 VDSALGKRKTPKNLGTR---------SDDDMELTVEDLIVIAKEYVEADKDRAHKHELHG 190
           + SAL KRK P+NL             DDD+ LTVEDL+VIAKEYVEADKDR  +H+++ 
Sbjct: 121 LSSALEKRKGPRNLDINLDIQVRPPDDDDDIGLTVEDLMVIAKEYVEADKDRDDRHKIYA 180

Query: 191 ERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTG 250
           ERESS IN RT +  NQ+EGSF TN D KQS++D  TSIPH+STAISGGEK+D  VRT G
Sbjct: 181 ERESSRINQRTSYTMNQAEGSFITNKDSKQSALDFKTSIPHESTAISGGEKVDRSVRTMG 240

Query: 251 DPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKSS 306
           DPAKDML+LFLGPLLKKSVE E+ KF+TTD QFSCDLK QNQRHN+NVG+VVSVMKKKSS
Sbjct: 241 DPAKDMLDLFLGPLLKKSVEIEQSKFLTTDVQFSCDLKSQNQRHNDNVGEVVSVMKKKSS 300

[Close]

BLAST of Carg21987 vs. TrEMBL
Match: tr|A0A0A0KPK7|A0A0A0KPK7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G052550 PE=4 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.7e-72
Identity = 156/233 (66.95%), Postives = 178/233 (76.39%), Query Frame = 0


Query: 83  VEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPAMKSNRLRRKLVDSALGKR---- 142
           ++D C  EC SKKRKGRK KSS+IDEA+D  DPEAVPA KSNR+RRK + SAL KR    
Sbjct: 1   MDDSCVLECESKKRKGRKLKSSQIDEAKDGHDPEAVPAKKSNRVRRKPLSSALEKRXXXX 60

Query: 143 ------KTPKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELHGERESSSINPRT 202
                               ELTVEDL+VIAKEYVEADKDR ++H+++ ERESS IN RT
Sbjct: 61  XXXXXXXXXXXXXXXXXXXXELTVEDLLVIAKEYVEADKDRDNRHKIYAERESSRINQRT 120

Query: 203 CHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTTGDPAKDMLNLFL 262
            + RNQ+EGSF TNND KQS++ L TSIPHDSTAIS GEK+D  V T GDPAKDMLNLFL
Sbjct: 121 SYTRNQAEGSFITNNDSKQSALVLKTSIPHDSTAISDGEKVDRSVSTMGDPAKDMLNLFL 180

Query: 263 GPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVGDVVSVMKKKSSLKDK 306
           GPLLKKSVE E+ KF+T D QFSCDLK QNQRHN+NVG+VVSVMKKKSSL+DK
Sbjct: 181 GPLLKKSVEIEQSKFLTKDVQFSCDLKSQNQRHNDNVGEVVSVMKKKSSLRDK 233

[Close]

BLAST of Carg21987 vs. TrEMBL
Match: tr|A0A2P4JVI1|A0A2P4JVI1_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_69755 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 2.0e-33
Identity = 126/318 (39.62%), Postives = 176/318 (55.35%), Query Frame = 0


Query: 2   AQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLA 61
           A+  +  K+MV VA + G+ RRLP WMLGV A DQ ++S+DVD N    +E L  QA  +
Sbjct: 79  ARTILGRKEMVGVAPNEGSRRRLPVWMLGVAAADQERKSDDVDKNNHHADEGLLPQACHS 138

Query: 62  KEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAV-PA 121
           +  N  K P K +L Q+K   V      +C +KKR    RK+S  D   D    E V   
Sbjct: 139 EAKNMTKAPGKGILVQEKG--VNSHFLLKCETKKR----RKASLQDSNLDGIITETVTKK 198

Query: 122 MKSNRLRRKLVDSALGKRKTPK----------NLGTRSDDDMELTVEDLIVIAKEYVEAD 181
            K NRL RK+ + +  KR+  K          ++   +DDD+ELT++DL+ IA+EYV+A+
Sbjct: 199 KKDNRLGRKVREPSARKRQKAKGSDFGRGEDFDIQLPNDDDVELTMDDLMTIAEEYVKAE 258

Query: 182 KDRAHKHELHGERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGG 241
           K++  +   + E  S  I P T  + + S    +  N   QSS     +  H ST     
Sbjct: 259 KNK-EQQVSNSECRSERIVPTTVSSSSVSVRLLDAPNG-NQSSPTEEVTASHSSTVSLAS 318

Query: 242 EKIDIGVRTTGDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVG 301
           E+  I  R TGDPA+DML+LFLGPLLKK  E E   F+  D +F+ + +RQ+Q  N  VG
Sbjct: 319 EETAIIDRRTGDPAQDMLDLFLGPLLKKPFEQENRSFI-KDMEFAYEFQRQSQ--NTVVG 378

Query: 302 DVVS-VMKKKSSLKDKEL 308
           + +  +MKKKSSLKDK L
Sbjct: 379 EEIEPLMKKKSSLKDKHL 385

[Close]

BLAST of Carg21987 vs. TrEMBL
Match: tr|A0A2P4JVF5|A0A2P4JVF5_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_69755 PE=4 SV=1)

HSP 1 Score: 150.6 bits (379), Expect = 5.9e-33
Identity = 125/316 (39.56%), Postives = 175/316 (55.38%), Query Frame = 0


Query: 2   AQDNIREKQMVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLA 61
           A+  +  K+MV VA + G+ RRLP WMLGV A DQ ++S+DVD N    +E L  QA  +
Sbjct: 79  ARTILGRKEMVGVAPNEGSRRRLPVWMLGVAAADQERKSDDVDKNNHHADEGLLPQACHS 138

Query: 62  KEGNSFKRPQKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAV-PA 121
           +  N  K P K +L Q+K   V      +C +KKR    RK+S  D   D    E V   
Sbjct: 139 EAKNMTKAPGKGILVQEKG--VNSHFLLKCETKKR----RKASLQDSNLDGIITETVTKK 198

Query: 122 MKSNRLRRKLVDSALGKRKTPK----------NLGTRSDDDMELTVEDLIVIAKEYVEAD 181
            K NRL RK+ + +  KR+  K          ++   +DDD+ELT++DL+ IA+EYV+A+
Sbjct: 199 KKDNRLGRKVREPSARKRQKAKGSDFGRGEDFDIQLPNDDDVELTMDDLMTIAEEYVKAE 258

Query: 182 KDRAHKHELHGERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGG 241
           K++  +   + E  S  I P T  + + S    +  N   QSS     +  H ST     
Sbjct: 259 KNK-EQQVSNSECRSERIVPTTVSSSSVSVRLLDAPNG-NQSSPTEEVTASHSSTVSLAS 318

Query: 242 EKIDIGVRTTGDPAKDMLNLFLGPLLKKSVENEKPKFVTTDAQFSCDLKRQNQRHNENVG 301
           E+  I  R TGDPA+DML+LFLGPLLKK  E E   F+  D +F+ + +RQ+Q  N  VG
Sbjct: 319 EETAIIDRRTGDPAQDMLDLFLGPLLKKPFEQENRSFI-KDMEFAYEFQRQSQ--NTVVG 378

Query: 302 DVVS-VMKKKSSLKDK 306
           + +  +MKKKSSLKDK
Sbjct: 379 EEIEPLMKKKSSLKDK 383

[Close]

BLAST of Carg21987 vs. TrEMBL
Match: tr|A0A1Q3D433|A0A1Q3D433_CEPFO (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30692 PE=4 SV=1)

HSP 1 Score: 142.1 bits (357), Expect = 2.1e-30
Identity = 116/307 (37.79%), Postives = 171/307 (55.70%), Query Frame = 0


Query: 11  MVRVASDRGTGRRLPQWMLGVRADDQIQRSNDVDNNKKSLEEELESQASLAKEGNSFKRP 70
           +V V +D    RRLP WMLGV A DQ+++S + D      EEE+ S A  +K   + ++ 
Sbjct: 2   IVGVDADGENRRRLPSWMLGVTAADQMRKSKNEDRISHHQEEEVASHAYHSKAKAASRQ- 61

Query: 71  QKSVLHQQKETLVEDLCTPECVSKKRKGRKRKSSRIDEAEDADDPEAVPA-MKSNRLRRK 130
                H+++ +        +C +K+   +KR SSR D       PE      KSN ++RK
Sbjct: 62  -----HEKESSTANSGLPSKCETKR---KKRLSSREDVKLQNSIPETFTGNKKSNAVKRK 121

Query: 131 LVDSALGKRKT---------PKNLGTRSDDDMELTVEDLIVIAKEYVEADKDRAHKHELH 190
           +++S+  ++K           + + + S DD ELTV DL++IA+EYV+ DKD A +   +
Sbjct: 122 VLESSPKRQKVKTASFKIAEEREISSHSYDDAELTVGDLLIIAEEYVKTDKDEALQPS-N 181

Query: 191 GERESSSINPRTCHARNQSEGSFNTNNDKKQSSVDLSTSIPHDSTAISGGEKIDIGVRTT 250
           GE ES    P T  +RN+S GS    N + Q +  L T+  ++S +IS  E+       T
Sbjct: 182 GESESERQLPTTDSSRNESGGSLVAPN-RNQRTPALETTDSYNSPSISASEQTHFTSIMT 241

Query: 251 GDPAKDMLNLFLGPLLKKSVENEK-PKFVTTDAQFSCDLKRQNQRHNENVG-DVVSVMKK 306
           GDPA+DML+LFLGPLLKKSV  EK  ++ T D  F  ++ +Q+Q  N  VG ++V   KK
Sbjct: 242 GDPAQDMLDLFLGPLLKKSVVKEKGTEYTTKDMAFDFEIPKQSQ--NAIVGEEMVPHTKK 295

The following BLAST results are available for this feature:

BLAST of Carg21987 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022941671.1	1.5e-160	98.03	uncharacterized protein LOC111446962 isoform X1 [Cucurbita moschata] >XP_0229416...	[more]
XP_023525842.1	8.8e-158	96.72	uncharacterized protein LOC111789338 isoform X1 [Cucurbita pepo subsp. pepo] >XP...	[more]
XP_022985336.1	1.7e-156	96.07	uncharacterized protein LOC111483374 isoform X1 [Cucurbita maxima]	[more]
XP_022941673.1	7.0e-155	97.97	uncharacterized protein LOC111446962 isoform X2 [Cucurbita moschata]	[more]
XP_023525859.1	1.9e-152	96.95	uncharacterized protein LOC111789338 isoform X2 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21987 vs. TAIR10


Match Name	E-value	Identity	Description

BLAST of Carg21987 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg21987 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BYS7\|A0A1S3BYS7_CUCME	8.0e-107	70.07	uncharacterized protein LOC103495060 OS=Cucumis melo OX=3656 GN=LOC103495060 PE=...	[more]
tr\|A0A0A0KPK7\|A0A0A0KPK7_CUCSA	1.7e-72	66.95	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G052550 PE=4 SV=1	[more]
tr\|A0A2P4JVI1\|A0A2P4JVI1_QUESU	2.0e-33	39.62	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_69755 PE=4 SV=1	[more]
tr\|A0A2P4JVF5\|A0A2P4JVF5_QUESU	5.9e-33	39.56	Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_69755 PE=4 SV=1	[more]
tr\|A0A1Q3D433\|A0A1Q3D433_CEPFO	2.1e-30	37.79	Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_30692 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21987-RA	Carg21987-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 33..53
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 190..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..228
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 175..189
None	No IPR available	PANTHER	PTHR36756	FAMILY NOT NAMED	coord: 15..305

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21987	Csa5G052550	Cucumber (Chinese Long) v2	carcuB0200
Carg21987	MELO3C018262	Melon (DHL92) v3.5.1	carmeB0182
Carg21987	CSPI05G01280	Wild cucumber (PI 183967)	carcpiB0206
Carg21987	Cp4.1LG01g06430	Cucurbita pepo (Zucchini)	carcpeB0258
Carg21987	MELO3C018262.2	Melon (DHL92) v3.6.1	carmedB0186
Carg21987	Bhi07G000218	Wax gourd	carwgoB0228

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21987	Cucumber (Gy14) v2	carcgybB0191
Carg21987	Cucurbita maxima (Rimu)	carcmaB0242
Carg21987	Cucurbita moschata (Rifu)	carcmoB0250
Carg21987	Cucurbita moschata (Rifu)	carcmoB0251
Carg21987	Cucumber (Chinese Long) v2	carcuB0198
Carg21987	Cucumber (Chinese Long) v3	carcucB0204
Carg21987	Cucumber (Chinese Long) v3	carcucB0205
Carg21987	Bottle gourd (USVL1VR-Ls)	carlsiB159
Carg21987	Watermelon (Charleston Gray)	carwcgB0171
Carg21987	Watermelon (97103) v2	carwmbB0183