Carg21895 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TAAAAAAATTCATTTTTTTTTCTTCAATTTTCATTTTTTTTACTTTCTATTATTAGGATTTAATTTTCTCATGTTTGCATGATCTGTTCTGTACATTAGCCAAAATGTTCTTTGGATTTTGTTGGATTTTTTGTTTCGAAATTTGACGAACTGTTGGAGTTTTGGGATTAGGGTTTCTTTTAATTCTTGTAAACCTTAGTTAATCATCTTCTAGGTTTTGTTTTTGTTCGATCTTTGTTTGATTAAGTTGTTTACGTAGTAAATACATTTCGAAAGCTCTGCATTAGTGTGTTAGATCGTGTTTCCTACTGCGGTTCTGAATTTGATCGGACTAGACATTATGGCTGATGATAGAGATCAAGATTCAAAATCACGTAGATTTTCTTCGCGTATTTGCAGTTTTGATTTCCAGGCTTTAGATAGAGGTTTGATTCAAGCTGTAGGGGAAAAGAGAGAAGAAAAATGTCGGGATCTGAAGGTGGTGTGATGACCAGTAGAGAATCCTTCAATGTCGCCGTTCAAAATAATTCGTTACAGTCGCAGCCGGCGGCCCAAAATATGCGATTATCCTTCAGTGCCGATGGCACAGCCGTCTACAAACCTGTGACTGTGACTCCGACTCCGACACCTTCAACTTTACCGTCCTACCAATCCTCCATGGCCGGAGTTTCTGGTAATGCCGGTAAGGAGGGATCGGCTGGTGGTGGGTCGATACTGCCCCATGATTTGAATATAAACTCGGTGGGCAGTGAGCAAATAAAGAGGAAGAGGGGAAGGCCAAGGAAGTATGGACCAGATGGCTCCATGGCATTAGCTTTGGGTTCTGGGCAGCCATCAAGAAGTGGAGCTTCTGAAGGAGGATTGGGCTCACCAAATTCATTGAAAAAAAGTAAAGGCAGGCCATCTGGTTCTAAGAAAAAGCGACAATTGGAAGCTTTGGGTAACTATTATAAGCGCCTTGTCCAATACTCCTCTTCCTTGGTGAGATCCAGTTGGGTCTCTGGATTTTGTGCTTGACTTGACTGCCTAATTTCTTATGCTTTTAGCTTTAATATCATTGATTGACTAGCAGTTTCGAGTTGACTAGCTAGATTGGATTAAATATTTGCACTCTTTTGTCTTGCATTTGAAACTATGAATCTTAGTTGTTATTTCCCTTCCCTTCCCTTCTTGATTTTGATCAATTTGTCATGGAAAATTAGATATTGTTAAGAACTGCATCCTATGTTGAATCATTAGCTAATCAAACGTACCTTTTCTGGTGGCATAGAGATTGTTTACTTGTCTACTACAGTTCTTTCCCTTGCCCTTTTTTGTGTTCTTTTTCTGTGCAAGATAGGAATCGTAGTGTTAACTGTAAGAACAACACAGGAACAGGAGAAAAAGAAAGGGAATCTCACTTTGTTTGGTTGACTTTTGGTGTCCAAGAAATGCTATTGTTTATATTCTAAACCGTTGTGTTATAATTATTTTATCTTGTAGCTTTGTTGAAAACTGAGTTTCTTATAGAGGAATCAATTGCAGGACCGGCTGGTTTTGGATTCACTCCACATGTTATCGATGTGAAAGCTGGAGAGGTTCTAATTTTAAATTCTTTCACCAATGTTATTAGCATCTTGAATGATTAAACAATACATGTTCTTGCATATTCAATTGTCAAATAATAACTGTAGATTATTGTTACATGGAATGTACTTTGGATGCGTGGGTGGCATTTAGGGGTCCTTTTTTTTTATAAAGATTATCCTCGAAGGGACTGCTTACTTCCGAAATAGATCCTCCTACCTTTATATAAATGTTGATTTATCAAGAATATGCAAGAAAAACACTTTGGATTGTTGATTCATCGCTAGAGATGGCTTAGAACTAATAGTTCATTATCTAATGGGTTTTTTCGAGAGTTCTGTTTCCTACCAAGATTATCTTTTTTCTTTTGGAATGGATATATTAACACTCTTTATAAGATCTGTACATTGATTTTGTGGTAGATGACCTTAAGATCTTGCTGCAACCTTCGGTGAGACGTGCATTTATGAAATCACCCACTCCCCCTAACAAAACAATAGTAGTAATAATAACAAGAAGAAGTAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGAATGCAGATTTTCATATGCATTCCGGACTTCCACTGTGCTTTCATTTCATTTTTACAGCCCCTTTGCTGACCAAGCAACAATAATTTGATTTGCACATGGTTTTACAGGATATTTCGTCAAAAATAATGTCCTTTTCTCAGAATGGCCCCAGGGCTATTTGTATCCTTTCAGCAAATGGAGCAATATCAAATGTGACTTTACGTCAACCTGCTACATCTGGTGGAACTGTCACTTATGAGGTTTCTGGTTTTTTCCTCGTATATAGTTCTAATAGAGAAACTGTTTGTGTTTGGTATTATTTACATTGGTTTAAGGATAATTGTTTTACTTATAGTACAACTTTATGATGCTCTGTATTTGTCTGTCTCCATGCAGGGGCGGTTTGAAATTTTGTCACTTTCAGGTTCATTTCTCCTCTCCGACAATGGTGGTCAGAGAAGCAGAGCTGGTGGTTTGAGTGTGTCTTTGTCCGGTCCAGATGGCCGAGTTTTAGGTGGCGGCGTCGCGGGTCTTCTTACAGCTTCATCTCCTGTTCAGGTGAATTAGCTTTTTGCCCATATACCATAGACAGAATCTTCCTCGACTTTATGTAACGGTTCAAGCCCACCACTAGCAGATATTGTCCTCTTTGGGTTTTTTTTCTTTTGGGTTTTTCCTCAAGATTTTTAAAACGCATCTGCGAGAGAGAGGTTTTCACACCCTTATAAATGGTGTTTCGTTCTCCTCCCCCACCAATGTGGCTCGGGGCCAGCGTCCTTGCTGGCACTTATTCCTTTCTCCAATCGATATGGGCCCCCACCAAATCTACCCCTCTTCGAGGCCCAGCATCCTTGCTAGCACATCATCTCATGTCCACTCCATTTGGGGCTCAGCCTTCTCACTGACACATCGCCTAGTGTCTGATTCTAATACCATTTGTAATGGCCCAAGTCTACCGCTAGCAGATCTTGTCTTCTTTGGACGTTTCCTTTTGGACTTTTCTTGAAGGTTTTTAAAACGCCTCTGCTAGGGAGAGGTTTCCACACCCTCCCCAACCGATGTGGGTTCTCACAATTTACTTCCGGATGAACTTCGGATTGGAAAAAAACTGTTTAACTTGATGACCTTCTACAATAACCAATTAGAAAAACGGTCAACTTTCTGATCCGATTGCTATACTCCACAGAAAATTTTGCCAGTTTCTGATTGCGATGTCCGATTTTACAACTTTTCACTTGATACTGTTTCTCCATTTTGTGATCAAATATACAGGTGGTAGTGGGAAGTTTCATAGTCGACAGCAACAAGGAACCAAAGCCAGCCCGCCAAACTGAACCCACAACAGCCTCGCCAATGCTAAACCAAGTCGCCTTTGGTCACTTGACCGGAGGAGCCAGTAGTCCATCGCACGGGACGCTGAGCGAGTCTTCCGGTGGCGGACCTGGCAGCCCCCTCAACAACAGCTCAGGAGCCTGCAACAACAGCAGCATCCATCCACAGACAATGTCCGGCATGCCATGGAAGTAAGTATCCTAGCAATGGAATCTTGTTGCGATCTGATGCGTCGAGTCGATAATCTAATTTCCATGACGGGTGTGTCTTAAGTTGTATTTCTAATGTCTTTTGATCTGTCAAGAGCAAACTAATTTTTGGTAAAAAAGTGTTCAGTCTTGTCGTGATACTAGCAAAATCAAGTAAAGGAGAGGTTCAATTTGTAATGTTTTGTTCGTCAAAGGGCTTGGCTGATTGTTACATTGAGTCATGTGGTTAGAAGAAGGGCTGGGTTTAGTTAGGCTGTTAGTTTTTGTAACGACAATATTAACT TAAAAAAATTCATTTTTTTTTCTTCAATTTTCATTTTTTTTACTTTCTATTATTAGGATTTAATTTTCTCATGTTTGCATGATCTGTTCTGTACATTAGCCAAAATGTTCTTTGGATTTTGTTGGATTTTTTGTTTCGAAATTTGACGAACTGTTGGAGTTTTGGGATTAGGGTTTCTTTTAATTCTTGTAAACCTTAGTTAATCATCTTCTAGGTTTTGTTTTTGTTCGATCTTTGTTTGATTAAGTTGTTTACGTAGTAAATACATTTCGAAAGCTCTGCATTAGTGTGTTAGATCGTGTTTCCTACTGCGGTTCTGAATTTGATCGGACTAGACATTATGGCTGATGATAGAGATCAAGATTCAAAATCACGTAGATTTTCTTCGCGTATTTGCAGTTTTGATTTCCAGGCTTTAGATAGAGGTTTGATTCAAGCTGTAGGGGAAAAGAGAGAAGAAAAATGTCGGGATCTGAAGGTGGTGTGATGACCAGTAGAGAATCCTTCAATGTCGCCGTTCAAAATAATTCGTTACAGTCGCAGCCGGCGGCCCAAAATATGCGATTATCCTTCAGTGCCGATGGCACAGCCGTCTACAAACCTGTGACTGTGACTCCGACTCCGACACCTTCAACTTTACCGTCCTACCAATCCTCCATGGCCGGAGTTTCTGGTAATGCCGGTAAGGAGGGATCGGCTGGTGGTGGGTCGATACTGCCCCATGATTTGAATATAAACTCGGTGGGCAGTGAGCAAATAAAGAGGAAGAGGGGAAGGCCAAGGAAGTATGGACCAGATGGCTCCATGGCATTAGCTTTGGGTTCTGGGCAGCCATCAAGAAGTGGAGCTTCTGAAGGAGGATTGGGCTCACCAAATTCATTGAAAAAAAGTAAAGGCAGGCCATCTGGTTCTAAGAAAAAGCGACAATTGGAAGCTTTGGGACCGGCTGGTTTTGGATTCACTCCACATGTTATCGATGTGAAAGCTGGAGAGGATATTTCGTCAAAAATAATGTCCTTTTCTCAGAATGGCCCCAGGGCTATTTGTATCCTTTCAGCAAATGGAGCAATATCAAATGTGACTTTACGTCAACCTGCTACATCTGGTGGAACTGTCACTTATGAGGGGCGGTTTGAAATTTTGTCACTTTCAGGTTCATTTCTCCTCTCCGACAATGGTGGTCAGAGAAGCAGAGCTGGTGGTTTGAGTGTGTCTTTGTCCGGTCCAGATGGCCGAGTTTTAGGTGGCGGCGTCGCGGGTCTTCTTACAGCTTCATCTCCTGTTCAGGTGGTAGTGGGAAGTTTCATAGTCGACAGCAACAAGGAACCAAAGCCAGCCCGCCAAACTGAACCCACAACAGCCTCGCCAATGCTAAACCAAGTCGCCTTTGGTCACTTGACCGGAGGAGCCAGTAGTCCATCGCACGGGACGCTGAGCGAGTCTTCCGGTGGCGGACCTGGCAGCCCCCTCAACAACAGCTCAGGAGCCTGCAACAACAGCAGCATCCATCCACAGACAATGTCCGGCATGCCATGGAAGTAAGTATCCTAGCAATGGAATCTTGTTGCGATCTGATGCGTCGAGTCGATAATCTAATTTCCATGACGGGTGTGTCTTAAGTTGTATTTCTAATGTCTTTTGATCTGTCAAGAGCAAACTAATTTTTGGTAAAAAAGTGTTCAGTCTTGTCGTGATACTAGCAAAATCAAGTAAAGGAGAGGTTCAATTTGTAATGTTTTGTTCGTCAAAGGGCTTGGCTGATTGTTACATTGAGTCATGTGGTTAGAAGAAGGGCTGGGTTTAGTTAGGCTGTTAGTTTTTGTAACGACAATATTAACT ATGTCGGGATCTGAAGGTGGTGTGATGACCAGTAGAGAATCCTTCAATGTCGCCGTTCAAAATAATTCGTTACAGTCGCAGCCGGCGGCCCAAAATATGCGATTATCCTTCAGTGCCGATGGCACAGCCGTCTACAAACCTGTGACTGTGACTCCGACTCCGACACCTTCAACTTTACCGTCCTACCAATCCTCCATGGCCGGAGTTTCTGGTAATGCCGGTAAGGAGGGATCGGCTGGTGGTGGGTCGATACTGCCCCATGATTTGAATATAAACTCGGTGGGCAGTGAGCAAATAAAGAGGAAGAGGGGAAGGCCAAGGAAGTATGGACCAGATGGCTCCATGGCATTAGCTTTGGGTTCTGGGCAGCCATCAAGAAGTGGAGCTTCTGAAGGAGGATTGGGCTCACCAAATTCATTGAAAAAAAGTAAAGGCAGGCCATCTGGTTCTAAGAAAAAGCGACAATTGGAAGCTTTGGGACCGGCTGGTTTTGGATTCACTCCACATGTTATCGATGTGAAAGCTGGAGAGGATATTTCGTCAAAAATAATGTCCTTTTCTCAGAATGGCCCCAGGGCTATTTGTATCCTTTCAGCAAATGGAGCAATATCAAATGTGACTTTACGTCAACCTGCTACATCTGGTGGAACTGTCACTTATGAGGGGCGGTTTGAAATTTTGTCACTTTCAGGTTCATTTCTCCTCTCCGACAATGGTGGTCAGAGAAGCAGAGCTGGTGGTTTGAGTGTGTCTTTGTCCGGTCCAGATGGCCGAGTTTTAGGTGGCGGCGTCGCGGGTCTTCTTACAGCTTCATCTCCTGTTCAGGTGGTAGTGGGAAGTTTCATAGTCGACAGCAACAAGGAACCAAAGCCAGCCCGCCAAACTGAACCCACAACAGCCTCGCCAATGCTAAACCAAGTCGCCTTTGGTCACTTGACCGGAGGAGCCAGTAGTCCATCGCACGGGACGCTGAGCGAGTCTTCCGGTGGCGGACCTGGCAGCCCCCTCAACAACAGCTCAGGAGCCTGCAACAACAGCAGCATCCATCCACAGACAATGTCCGGCATGCCATGGAAGTAA MSGSEGGVMTSRESFNVAVQNNSLQSQPAAQNMRLSFSADGTAVYKPVTVTPTPTPSTLPSYQSSMAGVSGNAGKEGSAGGGSILPHDLNINSVGSEQIKRKRGRPRKYGPDGSMALALGSGQPSRSGASEGGLGSPNSLKKSKGRPSGSKKKRQLEALGPAGFGFTPHVIDVKAGEDISSKIMSFSQNGPRAICILSANGAISNVTLRQPATSGGTVTYEGRFEILSLSGSFLLSDNGGQRSRAGGLSVSLSGPDGRVLGGGVAGLLTASSPVQVVVGSFIVDSNKEPKPARQTEPTTASPMLNQVAFGHLTGGASSPSHGTLSESSGGGPGSPLNNSSGACNNSSIHPQTMSGMPWK
BLAST of Carg21895 vs. NCBI nr
Match: XP_023546037.1 (AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo] >XP_023546038.1 AT-hook motif nuclear-localized protein 10-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 656.4 bits (1692), Expect = 5.7e-185 Identity = 354/359 (98.61%), Postives = 357/359 (99.44%), Query Frame = 0
BLAST of Carg21895 vs. NCBI nr
Match: XP_022946806.1 (AT-hook motif nuclear-localized protein 10-like [Cucurbita moschata]) HSP 1 Score: 646.0 bits (1665), Expect = 7.7e-182 Identity = 352/367 (95.91%), Postives = 353/367 (96.19%), Query Frame = 0
BLAST of Carg21895 vs. NCBI nr
Match: XP_022999728.1 (AT-hook motif nuclear-localized protein 10-like [Cucurbita maxima]) HSP 1 Score: 639.0 bits (1647), Expect = 9.4e-180 Identity = 350/363 (96.42%), Postives = 352/363 (96.97%), Query Frame = 0
BLAST of Carg21895 vs. NCBI nr
Match: XP_022155911.1 (AT-hook motif nuclear-localized protein 10-like [Momordica charantia] >XP_022155912.1 AT-hook motif nuclear-localized protein 10-like [Momordica charantia]) HSP 1 Score: 528.9 bits (1361), Expect = 1.4e-146 Identity = 299/370 (80.81%), Postives = 316/370 (85.41%), Query Frame = 0
BLAST of Carg21895 vs. NCBI nr
Match: XP_008464805.1 (PREDICTED: AT-hook motif nuclear-localized protein 10-like [Cucumis melo] >XP_008464806.1 PREDICTED: AT-hook motif nuclear-localized protein 10-like [Cucumis melo] >XP_008464807.1 PREDICTED: AT-hook motif nuclear-localized protein 10-like [Cucumis melo] >XP_008464808.1 PREDICTED: AT-hook motif nuclear-localized protein 10-like [Cucumis melo] >XP_016903265.1 PREDICTED: AT-hook motif nuclear-localized protein 10-like [Cucumis melo]) HSP 1 Score: 481.5 bits (1238), Expect = 2.5e-132 Identity = 279/368 (75.82%), Postives = 292/368 (79.35%), Query Frame = 0
BLAST of Carg21895 vs. TAIR10
Match: AT2G33620.1 (AT hook motif DNA-binding family protein) HSP 1 Score: 277.7 bits (709), Expect = 1.0e-74 Identity = 195/371 (52.56%), Postives = 236/371 (63.61%), Query Frame = 0
BLAST of Carg21895 vs. TAIR10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein) HSP 1 Score: 198.0 bits (502), Expect = 1.0e-50 Identity = 114/205 (55.61%), Postives = 141/205 (68.78%), Query Frame = 0
BLAST of Carg21895 vs. TAIR10
Match: AT5G46640.1 (AT hook motif DNA-binding family protein) HSP 1 Score: 197.2 bits (500), Expect = 1.7e-50 Identity = 123/241 (51.04%), Postives = 159/241 (65.98%), Query Frame = 0
BLAST of Carg21895 vs. TAIR10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1) HSP 1 Score: 196.8 bits (499), Expect = 2.2e-50 Identity = 130/262 (49.62%), Postives = 171/262 (65.27%), Query Frame = 0
BLAST of Carg21895 vs. TAIR10
Match: AT4G22770.1 (AT hook motif DNA-binding family protein) HSP 1 Score: 189.5 bits (480), Expect = 3.6e-48 Identity = 111/216 (51.39%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of Carg21895 vs. Swiss-Prot
Match: sp|O22812|AHL10_ARATH (AT-hook motif nuclear-localized protein 10 OS=Arabidopsis thaliana OX=3702 GN=AHL10 PE=1 SV=2) HSP 1 Score: 277.7 bits (709), Expect = 1.8e-73 Identity = 195/371 (52.56%), Postives = 236/371 (63.61%), Query Frame = 0
BLAST of Carg21895 vs. Swiss-Prot
Match: sp|Q9SB31|AHL3_ARATH (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 1.8e-49 Identity = 114/205 (55.61%), Postives = 141/205 (68.78%), Query Frame = 0
BLAST of Carg21895 vs. Swiss-Prot
Match: sp|Q9FIR1|AHL8_ARATH (AT-hook motif nuclear-localized protein 8 OS=Arabidopsis thaliana OX=3702 GN=AHL8 PE=2 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 3.1e-49 Identity = 123/241 (51.04%), Postives = 159/241 (65.98%), Query Frame = 0
BLAST of Carg21895 vs. Swiss-Prot
Match: sp|Q8VYJ2|AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.0e-49 Identity = 130/262 (49.62%), Postives = 171/262 (65.27%), Query Frame = 0
BLAST of Carg21895 vs. Swiss-Prot
Match: sp|O49658|AHL2_ARATH (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1) HSP 1 Score: 189.5 bits (480), Expect = 6.5e-47 Identity = 111/216 (51.39%), Postives = 146/216 (67.59%), Query Frame = 0
BLAST of Carg21895 vs. TrEMBL
Match: tr|A0A1S3CMV0|A0A1S3CMV0_CUCME (AT-hook motif nuclear-localized protein 10-like OS=Cucumis melo OX=3656 GN=LOC103502606 PE=4 SV=1) HSP 1 Score: 481.5 bits (1238), Expect = 1.7e-132 Identity = 279/368 (75.82%), Postives = 292/368 (79.35%), Query Frame = 0
BLAST of Carg21895 vs. TrEMBL
Match: tr|A0A0A0KFZ2|A0A0A0KFZ2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401440 PE=4 SV=1) HSP 1 Score: 478.0 bits (1229), Expect = 1.8e-131 Identity = 275/368 (74.73%), Postives = 290/368 (78.80%), Query Frame = 0
BLAST of Carg21895 vs. TrEMBL
Match: tr|D7UDF0|D7UDF0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0122g00700 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.6e-114 Identity = 246/370 (66.49%), Postives = 280/370 (75.68%), Query Frame = 0
BLAST of Carg21895 vs. TrEMBL
Match: tr|A5AT53|A5AT53_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VITISV_030792 PE=4 SV=1) HSP 1 Score: 419.9 bits (1078), Expect = 5.9e-114 Identity = 245/369 (66.40%), Postives = 279/369 (75.61%), Query Frame = 0
BLAST of Carg21895 vs. TrEMBL
Match: tr|A0A2K2AMM9|A0A2K2AMM9_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_005G256500v3 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 2.5e-104 Identity = 237/396 (59.85%), Postives = 273/396 (68.94%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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