Carg21809 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21809
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Amsh-like ubiquitin thioesterase 2
Location	Cucurbita_argyrosperma_scaffold_192 : 44621 .. 47690 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTGCTCCCTACTTTCTTCCCCACTTGCTTTCCACTGCATCATTATCCAGCCAACTCCAAGGTTCGTCCCCTTTCTACTCCCTCTCCTGCGCGCAGATCTTCGTTTCTTTTAACTGTTATAAATTCAGCTAAGCGTTTCCTTCCAATTATGTTTTCCTTTATTGTGGAATTTAATTCTTTTAGATGCCCTTTGTCCGTGGTTCCTTGCTGACTATAGCTATTCAACAAATCAGATTAAATTATTTGATTTACATATCGAACAAGAATCTCAATTTCCAGGGCCGTGTCATCGCAGGAACGATTCCATTTTTCCACTAGCGAATAAAAAGCTTCAATACTATAAGCTGGGTTCATTATTTTCGTCTTTAATTAGTATCATTTGTCCGTGTTCATATTTCCTCTAGGCCATGAACAGTGGTTCGCAAGAAATGAGAACTCGAAGGTAATGGCAATTCTCTTCTCGGACAGAAGCTGCTGTATTCTTTCCCATCTAGCATGTAATATTGACACTGTTTAACCAGGCAGCATCCTGTTACTCAGAATTCCCCATCACTGGCAATCTCCTGTACAGCAAAATTGCCTCAAGATGTACAAATTTCTCCAATCACTGGGGATGACGAGCGTGGAGACTTCAACTCCAATAATGACTCATCTGCATCTGGACTTCTCAAAACTTTACATATAGTAAGGAAAAAGTCCCACTTTTTTTCAACTATTTCTTGTTGTGTATAGAACTAAATTAACCTCTTGTTGCACTGCACCCATGTATTCTTGTTAGCCAACCAACAATCTATCTCTACCCCACGTATCGTTGAATAATAATAATGATGATGATGATAACCACTTGTTACAACCATGTATTCTGGCTACCTTACGGCTTAGACATCGATATCCTTTTTCTTCTCAATTCCAATGCTCGTGGTTTTGCTATTATACTCCAACCGGATATCCACGAGGTGCTGTCTTAGGATCGTTGCAATCTTTTCATTTTCAGTCAACAAGACTAATGGATGATTTTCTCGCACTTTCAAAGAGTAACACGGAGAAAGATCTTGAGACCTGTGGGATTCTTGGAGCCCATTTAGTAAGATTTCCTACACTTTCCATTGAAGCTGGAGTTATAATGTATATGTGTGTGTGTACATATATATTCTTACCATAGAGTTATTGTATTTGGCTTCTTGCATGTCTAAAGATTACTTGAATAATTTTAAATTGACCTTTGATCTTCCATCTGATATTGTCCTCAAAACTCATTTCAGTTCTGTGTATATAATTATTGAGTTGGCTGTCTCATGTCATTCAGAGGTTCAAATAACTTTACTAAATGTTGACTCATGGCTGTGTTACTTTTTGGAGTTGTAACGAAAGCGGGAGTAGGAGATTTGAACCTCTAGCCTCTTGGTTGAGGACGTTTTTTTTTTAACCAATTGAGTTGTGTTCAAGTTGGTTCGTGTCGATAATATCTCTGTCGTTCCAAAAGCTAATAGTCACATTTATTCACAACAACTTCACGTAAGGAAATGAGATTTCAATAATTTGAGTTTCCAATGCGAAGCTAGTTTTGATTGTTGGTGGCATTACCTTTGTTCTTATCGTCCCCTTCCCTGAATTTCCTACATTACATTCTGGAGAATTGTACTTAAAATGTCATGACACCACTGGCATGGGAAATCGATTCCTTGTATATTTTCCTTCTTCCCTTTTCTTTTGATATGCTCCTTGCCTTGCTTTATACGCTTTAATTGTGGGATATGTTTGTTTGAAATAAAGTTTTACGAACTTATATATATTCCCCCTTTCTGTTAAAAGCAGGAGAAAGAAACCTTCTATGTGACTACGCTTGTCATACCAAAACAGGAATCGACTTCCAATTCTGTTAGATCATCGCCTCTCTTGACCTTTATTCTTTGGTTTATATTGAAAACCGCCCTCTAATGTTCTTACAGGCCGTACTTGCTTCTGTCTTCATACCAAATGACAGTGCCAAGCTATAAACGAGGAAGAAGTCTACGCAATTCATAGCGAACGATCCCTTTGTCCAGTTGGATGGATTCATGTATGCTGTCCCCAATTGTACATGCCTATACTTTTCCCTCATAAATATTTGTGCCTATTGGACAAGTATGATAACATCTCAGCTTCATGTTTTAGCTTCCAATTATAAGCTTGTGAGAATACCAAGAGAAAAGTCCCAATATCTTTTGACAATTGATTTGGTGAAAGCTTTCATTGAGTGGATATTAATAAGATGAAAACTACTTACTTGCTTTTCCTTTCTGTATCTATATGTATTATGATGTTCACACTTGTGACTTTTGAGCAACTGTTAGTAAATATTCCTGAATTGTCTCCTGAAAATATTAATATAAGCATATGTATTTTCTAACCTTTAAAGCCTTTTCCTTTTTCCCTTCTGAAAAATAAATTCCAGACGCATCCTTCACAGAGTTGTTTCATGTCTTCAATAGATCTGCACACTCACTATCCATATCAGGTAATGTCTTCTTTATAACCACCGAGGTAGCTGGTTAGCTAATAACTTCGAATTAAATCATTGTGAATGCCCTTGATTGCCATTGTCATTGATTCCTCATGAAATTGACGGTTGTCTGTTCATCTGAGTTGTGTAAAACTTCAAATCATATGCATCCCACAGTTTATCCCTTTGTTTTTTTGGTTGAGCAGGTAATGGTGCCCGAGGCTTTCGCCATTGTCGTTGCTCCAACAGATGCATCAAGGTAGCCATCCAAAGTGCCAATTGGTGTGAAACTCAATTGCTGTGTTCAACTTATAATTGATATGGTGGAAGCTGTTTGTTGTGTTTTAGGAGCTTTGGAATATTTCGACTGAGTGATCCTGGTGGGATGAAGATCCTGAGAGAGTGTCAAGAGGATGGTTTTCACCCTCACAAAGATCCAGAAGATGGCAGTCCCATTTACGAGCTCTGCTCTAATGTGTACCAAAATTCCAACTTGAGATTTGAAATCATTGACTTGCGTTCATGATGCAATGCTCCCAAGCGGTTTTGGGTTCGGTTCATAGTACGAAAGAATCGCACTCTGTTTTT

mRNA sequence

ATTGCTCCCTACTTTCTTCCCCACTTGCTTTCCACTGCATCATTATCCAGCCAACTCCAAGGAACGATTCCATTTTTCCACTAGCGAATAAAAAGCTTCAATACTATAAGCTGGGTTCATTATTTTCGTCTTTAATTAGTATCATTTGTCCGTGTTCATATTTCCTCTAGGCCATGAACAGTGGTTCGCAAGAAATGAGAACTCGAAGGCAGCATCCTGTTACTCAGAATTCCCCATCACTGGCAATCTCCTGTACAGCAAAATTGCCTCAAGATGTACAAATTTCTCCAATCACTGGGGATGACGAGCGTGGAGACTTCAACTCCAATAATGACTCATCTGCATCTGGACTTCTCAAAACTTTACATATATCAACAAGACTAATGGATGATTTTCTCGCACTTTCAAAGAGTAACACGGAGAAAGATCTTGAGACCTGTGGGATTCTTGGAGCCCATTTAGTAAGATTTCCTACACTTTCCATTGAAGCTGGAGTTATAATGTATATGTGTGTGTGTACATATATATTCTTACCATAGAGTTATTGTATTTGGCTTCTTGCATGTCTAAAGATTACTTGAATAATTTTAAATTGACCTTTGATCTTCCATCTGATATTGTCCTCAAAACTCATTTCAGTTCTGTGTATATAATTATTGAGTTGGCTGTCTCATGTCATTCAGAGGTTCAAATAACTTTACTAAATGTTGACTCATGGCTGTGTTACTTTTTGGAGTTGTAACGAAAGCGGGAGTAGGAGATTTGAACCTCTAGCCTCTTGGTTGAGGACGTTTTTTTTTTAACCAATTGAGTTGTGTTCAAGTTGGTTCGTGTCGATAATATCTCTGTCGTTCCAAAAGCTAATAGTCACATTTATTCACAACAACTTCACGTAAGGAAATGAGATTTCAATAATTTGAGTTTCCAATGCGAAGCTAGTTTTGATTGTTGGTGGCATTACCTTTGTTCTTATCGTCCCCTTCCCTGAATTTCCTACATTACATTCTGGAGAATTGTACTTAAAATGTCATGACACCACTGGCATGGGAAATCGATTCCTTGTATATTTTCCTTCTTCCCTTTTCTTTTGATATGCTCCTTGCCTTGCTTTATACGCTTTAATTGTGGGATATGTTTGTTTGAAATAAAGTTTTACGAACTTATATATATTCCCCCTTTCTGTTAAAAGCAGGAGAAAGAAACCTTCTATGTGACTACGCTTGTCATACCAAAACAGGAATCGACTTCCAATTCTGTTAGATCATCGCCTCTCTTGACCTTTATTCTTTGGTTTATATTGAAAACCGCCCTCTAATGTTCTTACAGGCCGTACTTGCTTCTGTCTTCATACCAAATGACAGTGCCAAGCTATAAACGAGGAAGAAGTCTACGCAATTCATAGCGAACGATCCCTTTGTCCAGTTGGATGGATTCATACGCATCCTTCACAGAGTTGTTTCATGTCTTCAATAGATCTGCACACTCACTATCCATATCAGGTAATGGTGCCCGAGGCTTTCGCCATTGTCGTTGCTCCAACAGATGCATCAAGGAGCTTTGGAATATTTCGACTGAGTGATCCTGGTGGGATGAAGATCCTGAGAGAGTGTCAAGAGGATGGTTTTCACCCTCACAAAGATCCAGAAGATGGCAGTCCCATTTACGAGCTCTGCTCTAATGTGTACCAAAATTCCAACTTGAGATTTGAAATCATTGACTTGCGTTCATGATGCAATGCTCCCAAGCGGTTTTGGGTTCGGTTCATAGTACGAAAGAATCGCACTCTGTTTTT

Coding sequence (CDS)

ATGAACAGTGGTTCGCAAGAAATGAGAACTCGAAGGCAGCATCCTGTTACTCAGAATTCCCCATCACTGGCAATCTCCTGTACAGCAAAATTGCCTCAAGATGTACAAATTTCTCCAATCACTGGGGATGACGAGCGTGGAGACTTCAACTCCAATAATGACTCATCTGCATCTGGACTTCTCAAAACTTTACATATATCAACAAGACTAATGGATGATTTTCTCGCACTTTCAAAGAGTAACACGGAGAAAGATCTTGAGACCTGTGGGATTCTTGGAGCCCATTTAGTAAGATTTCCTACACTTTCCATTGAAGCTGGAGTTATAATGTATATGTGTGTGTGTACATATATATTCTTACCATAG

Protein sequence

MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLVRFPTLSIEAGVIMYMCVCTYIFLP

Homology

[Close]

BLAST of Carg21809 vs. NCBI nr
Match: XP_022961777.1 (AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita moschata] >XP_022961778.1 AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita moschata])

HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45
Identity = 99/109 (90.83%), Postives = 100/109 (91.74%), Query Frame = 0


Query: 1   MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60
           MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL
Sbjct: 1   MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60

Query: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLVRFPTLSIEAGVI 110
           LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL    T  +   VI
Sbjct: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLQEKETFYVTTLVI 109

[Close]

BLAST of Carg21809 vs. NCBI nr
Match: XP_022961780.1 (AMSH-like ubiquitin thioesterase 2 isoform X5 [Cucurbita moschata])

HSP 1 Score: 190.7 bits (483), Expect = 3.0e-45
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0


Query: 1  MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60
          MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL
Sbjct: 1  MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60

Query: 61 LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
          LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL
Sbjct: 61 LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 96

[Close]

BLAST of Carg21809 vs. NCBI nr
Match: XP_022996544.1 (AMSH-like ubiquitin thioesterase 2 isoform X3 [Cucurbita maxima])

HSP 1 Score: 190.3 bits (482), Expect = 3.9e-45
Identity = 98/109 (89.91%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60
           MNSGSQEMRTRRQHPVTQNSPSLAISCT KLPQDVQISPITGDDERGDFNSNNDSSASGL
Sbjct: 22  MNSGSQEMRTRRQHPVTQNSPSLAISCTTKLPQDVQISPITGDDERGDFNSNNDSSASGL 81

Query: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLVRFPTLSIEAGVI 110
           LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL    T  +   VI
Sbjct: 82  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLQEEETFYVTTLVI 130

[Close]

BLAST of Carg21809 vs. NCBI nr
Match: XP_022996545.1 (AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita maxima])

HSP 1 Score: 189.1 bits (479), Expect = 8.7e-45
Identity = 95/96 (98.96%), Postives = 95/96 (98.96%), Query Frame = 0


Query: 1   MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60
           MNSGSQEMRTRRQHPVTQNSPSLAISCT KLPQDVQISPITGDDERGDFNSNNDSSASGL
Sbjct: 22  MNSGSQEMRTRRQHPVTQNSPSLAISCTTKLPQDVQISPITGDDERGDFNSNNDSSASGL 81

Query: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL
Sbjct: 82  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 117

[Close]

BLAST of Carg21809 vs. NCBI nr
Match: XP_023545745.1 (AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo] >XP_023545746.1 AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo] >XP_023545747.1 AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 2.5e-44
Identity = 97/109 (88.99%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MNSGSQEMRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60
           M+SGSQE RTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL
Sbjct: 1   MDSGSQETRTRRQHPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSASGL 60

Query: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLVRFPTLSIEAGVI 110
           LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL    T  +   VI
Sbjct: 61  LKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHLQEKETFYVTTLVI 109

[Close]

BLAST of Carg21809 vs. TAIR10
Match: AT1G10600.1 (associated molecule with the SH3 domain of STAM 2)

HSP 1 Score: 59.3 bits (142), Expect = 1.9e-09
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 16 VTQNSPSLAISCTAKL---PQDVQISPITGDDERGDFNSNNDSSASGLLKTLHISTRLMD 75
          VT +SPS ++SC   +      V    I+G D      ++ +SS + +L+ +HIS RL++
Sbjct: 2  VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDN----INHGESSEAKILRDVHISERLLE 61

Query: 76 DFLALSKSNTEKDLETCGILGAHLVR 99
          DF  L++ NTEKDLETCG L A L R
Sbjct: 62 DFTELARENTEKDLETCGTLAAFLER 83

[Close]

BLAST of Carg21809 vs. TAIR10
Match: AT4G16144.1 (associated molecule with the SH3 domain of STAM 3)

HSP 1 Score: 49.3 bits (116), Expect = 2.0e-06
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 64  LHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           LH+  R+MDDFL L++SNTE++LETCG+L   L
Sbjct: 333 LHVPVRIMDDFLRLARSNTERNLETCGVLAGSL 365

[Close]

BLAST of Carg21809 vs. TAIR10
Match: AT1G48790.1 (associated molecule with the SH3 domain of STAM 1)

HSP 1 Score: 47.8 bits (112), Expect = 5.7e-06
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 64  LHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           LHI+T +MD F+ L+KSNT+K+LETCGIL   L
Sbjct: 333 LHIATSMMDTFMRLAKSNTKKNLETCGILAGSL 365

[Close]

BLAST of Carg21809 vs. Swiss-Prot
Match: sp|Q6NKP9|AMSH2_ARATH (AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.4e-08
Identity = 36/86 (41.86%), Postives = 52/86 (60.47%), Query Frame = 0


Query: 16 VTQNSPSLAISCTAKL---PQDVQISPITGDDERGDFNSNNDSSASGLLKTLHISTRLMD 75
          VT +SPS ++SC   +      V    I+G D      ++ +SS + +L+ +HIS RL++
Sbjct: 2  VTLSSPSPSLSCVENVTCKSSHVSRVLISGTDN----INHGESSEAKILRDVHISERLLE 61

Query: 76 DFLALSKSNTEKDLETCGILGAHLVR 99
          DF  L++ NTEKDLETCG L A L R
Sbjct: 62 DFTELARENTEKDLETCGTLAAFLER 83

[Close]

BLAST of Carg21809 vs. Swiss-Prot
Match: sp|Q5PNU3|AMSH3_ARATH (AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 3.5e-05
Identity = 20/33 (60.61%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 64  LHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           LH+  R+MDDFL L++SNTE++LETCG+L   L
Sbjct: 333 LHVPVRIMDDFLRLARSNTERNLETCGVLAGSL 365

[Close]

BLAST of Carg21809 vs. Swiss-Prot
Match: sp|Q8VYB5|AMSH1_ARATH (AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 1.0e-04
Identity = 21/33 (63.64%), Postives = 27/33 (81.82%), Query Frame = 0


Query: 64  LHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           LHI+T +MD F+ L+KSNT+K+LETCGIL   L
Sbjct: 333 LHIATSMMDTFMRLAKSNTKKNLETCGILAGSL 365

[Close]

BLAST of Carg21809 vs. TrEMBL
Match: tr|A0A251R349|A0A251R349_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GSQEMRTRRQ------HPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSA 63
           GS  ++T  Q      H VTQ SPS  ISCT  +PQ   IS IT D E G   S+N S++
Sbjct: 38  GSNFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITVDTEHGQSQSSNQSTS 97

Query: 64  SGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           S +L+ +HIS  LM+DFL L+K NTEKDLETCG LGA L
Sbjct: 98  STVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFL 136

[Close]

BLAST of Carg21809 vs. TrEMBL
Match: tr|A0A251R342|A0A251R342_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GSQEMRTRRQ------HPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSA 63
           GS  ++T  Q      H VTQ SPS  ISCT  +PQ   IS IT D E G   S+N S++
Sbjct: 51  GSNFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITVDTEHGQSQSSNQSTS 110

Query: 64  SGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           S +L+ +HIS  LM+DFL L+K NTEKDLETCG LGA L
Sbjct: 111 STVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFL 149

[Close]

BLAST of Carg21809 vs. TrEMBL
Match: tr|A0A251R365|A0A251R365_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GSQEMRTRRQ------HPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSA 63
           GS  ++T  Q      H VTQ SPS  ISCT  +PQ   IS IT D E G   S+N S++
Sbjct: 38  GSNFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITVDTEHGQSQSSNQSTS 97

Query: 64  SGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           S +L+ +HIS  LM+DFL L+K NTEKDLETCG LGA L
Sbjct: 98  STVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFL 136

[Close]

BLAST of Carg21809 vs. TrEMBL
Match: tr|A0A251R367|A0A251R367_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GSQEMRTRRQ------HPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSA 63
           GS  ++T  Q      H VTQ SPS  ISCT  +PQ   IS IT D E G   S+N S++
Sbjct: 38  GSNFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITVDTEHGQSQSSNQSTS 97

Query: 64  SGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           S +L+ +HIS  LM+DFL L+K NTEKDLETCG LGA L
Sbjct: 98  STVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFL 136

[Close]

BLAST of Carg21809 vs. TrEMBL
Match: tr|A0A251R449|A0A251R449_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1)

HSP 1 Score: 95.5 bits (236), Expect = 8.7e-17
Identity = 53/99 (53.54%), Postives = 64/99 (64.65%), Query Frame = 0


Query: 4   GSQEMRTRRQ------HPVTQNSPSLAISCTAKLPQDVQISPITGDDERGDFNSNNDSSA 63
           GS  ++T  Q      H VTQ SPS  ISCT  +PQ   IS IT D E G   S+N S++
Sbjct: 51  GSNFLKTTSQCQNITVHTVTQFSPSPVISCTESVPQGANISQITVDTEHGQSQSSNQSTS 110

Query: 64  SGLLKTLHISTRLMDDFLALSKSNTEKDLETCGILGAHL 97
           S +L+ +HIS  LM+DFL L+K NTEKDLETCG LGA L
Sbjct: 111 STVLRDVHISANLMEDFLGLAKDNTEKDLETCGTLGAFL 149

The following BLAST results are available for this feature:

BLAST of Carg21809 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961777.1	1.3e-45	90.83	AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita moschata] >XP_022961778...	[more]
XP_022961780.1	3.0e-45	100.00	AMSH-like ubiquitin thioesterase 2 isoform X5 [Cucurbita moschata]	[more]
XP_022996544.1	3.9e-45	89.91	AMSH-like ubiquitin thioesterase 2 isoform X3 [Cucurbita maxima]	[more]
XP_022996545.1	8.7e-45	98.96	AMSH-like ubiquitin thioesterase 2 isoform X4 [Cucurbita maxima]	[more]
XP_023545745.1	2.5e-44	88.99	AMSH-like ubiquitin thioesterase 2 isoform X6 [Cucurbita pepo subsp. pepo] >XP_0...	[more]

BLAST of Carg21809 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G10600.1	1.9e-09	41.86	associated molecule with the SH3 domain of STAM 2	[more]
AT4G16144.1	2.0e-06	60.61	associated molecule with the SH3 domain of STAM 3	[more]
AT1G48790.1	5.7e-06	63.64	associated molecule with the SH3 domain of STAM 1	[more]

BLAST of Carg21809 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q6NKP9\|AMSH2_ARATH	3.4e-08	41.86	AMSH-like ubiquitin thioesterase 2 OS=Arabidopsis thaliana OX=3702 GN=AMSH2 PE=2...	[more]
sp\|Q5PNU3\|AMSH3_ARATH	3.5e-05	60.61	AMSH-like ubiquitin thioesterase 3 OS=Arabidopsis thaliana OX=3702 GN=AMSH3 PE=1...	[more]
sp\|Q8VYB5\|AMSH1_ARATH	1.0e-04	63.64	AMSH-like ubiquitin thioesterase 1 OS=Arabidopsis thaliana OX=3702 GN=AMSH1 PE=2...	[more]

BLAST of Carg21809 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A251R349\|A0A251R349_PRUPE	8.7e-17	53.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1	[more]
tr\|A0A251R342\|A0A251R342_PRUPE	8.7e-17	53.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1	[more]
tr\|A0A251R365\|A0A251R365_PRUPE	8.7e-17	53.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1	[more]
tr\|A0A251R367\|A0A251R367_PRUPE	8.7e-17	53.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1	[more]
tr\|A0A251R449\|A0A251R449_PRUPE	8.7e-17	53.54	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G253200 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21809-RA	Carg21809-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	G3DSA:3.40.140.10		coord: 42..116 e-value: 1.7E-8 score: 36.0
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 37..57
None	No IPR available	PANTHER	PTHR12947:SF9	AMSH-LIKE UBIQUITIN THIOESTERASE 2	coord: 11..96
None	No IPR available	PANTHER	PTHR12947	AMSH	coord: 11..96

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21809	CmaCh05G000110	Cucurbita maxima (Rimu)	carcmaB0707
Carg21809	CmoCh05G000120	Cucurbita moschata (Rifu)	carcmoB0686
Carg21809	Cp4.1LG11g00720	Cucurbita pepo (Zucchini)	carcpeB0709

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21809	Silver-seed gourd	carcarB283
Carg21809	Silver-seed gourd	carcarB488
Carg21809	Cucumber (Gy14) v2	carcgybB0506
Carg21809	Cucumber (Gy14) v2	carcgybB0507
Carg21809	Cucumber (Gy14) v1	carcgyB0575
Carg21809	Cucumber (Gy14) v1	carcgyB0576
Carg21809	Cucurbita maxima (Rimu)	carcmaB0704
Carg21809	Cucurbita maxima (Rimu)	carcmaB0706
Carg21809	Cucurbita moschata (Rifu)	carcmoB0684
Carg21809	Cucurbita moschata (Rifu)	carcmoB0685
Carg21809	Cucurbita pepo (Zucchini)	carcpeB0710
Carg21809	Cucurbita pepo (Zucchini)	carcpeB0711
Carg21809	Wild cucumber (PI 183967)	carcpiB0537
Carg21809	Wild cucumber (PI 183967)	carcpiB0538
Carg21809	Cucumber (Chinese Long) v2	carcuB0529
Carg21809	Cucumber (Chinese Long) v2	carcuB0530
Carg21809	Cucumber (Chinese Long) v3	carcucB0535
Carg21809	Cucumber (Chinese Long) v3	carcucB0536
Carg21809	Bottle gourd (USVL1VR-Ls)	carlsiB453
Carg21809	Bottle gourd (USVL1VR-Ls)	carlsiB454
Carg21809	Melon (DHL92) v3.5.1	carmeB0505
Carg21809	Melon (DHL92) v3.5.1	carmeB0506
Carg21809	Melon (DHL92) v3.6.1	carmedB0510
Carg21809	Melon (DHL92) v3.6.1	carmedB0511
Carg21809	Watermelon (Charleston Gray)	carwcgB0489
Carg21809	Watermelon (Charleston Gray)	carwcgB0490
Carg21809	Watermelon (97103) v1	carwmB0499
Carg21809	Watermelon (97103) v1	carwmB0501
Carg21809	Watermelon (97103) v2	carwmbB0527
Carg21809	Watermelon (97103) v2	carwmbB0528
Carg21809	Wax gourd	carwgoB0610
Carg21809	Wax gourd	carwgoB0611
Carg21809	Wax gourd	carwgoB0613