Carg21728 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21728
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Protein of unknown function (DUF803)
Location	Cucurbita_argyrosperma_scaffold_198 : 10249 .. 13731 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TAGAAATGCAAGGGATAGAAACAGGCAAAAGGACAAAGTTCGGTCGTTGGCGCAAAAATTTGGAGGCAATGCTCTGACGTAAATCGCAATTCCCCCTCCAACCATAACCGTACTCTCCGATTTCTTGATTTATTCTTCCCCGTCTCCTTCGATTCTTCTCCGTGTTTCGATTTTTCGGCTTTCAAGGAAGATATGTGGGAACCCATTTGTTTAACTCTGGCCGCCGCCGCCGGCAACAATATCGGCAAAATTATTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCCTTCAAGCTCAAGGTACGGTTTCTCCTTTTCTTTTCAATTTCCTTTCTCCATGTCAACGGGCGTCGTGATTTTCCCGACATTTCCGTCTGGGTCATCTAATTTCATGCGATTCGTCTTCTTTTTCTCCCTTCAACTGCGATTGCTAGTTGTACTGTGTTTCTTTGATGTTGATCTTATTTGATCTTCAACTTTTCTCTACTTCCCGATTTCATTGGGTTGTATTCTGAATGTAAACTTTCTTATAGCGAATTCATTGAACGCGTTGATAAATTTCCTCTTGTTGTTTGTGTTGTATAGGTGATAAGGGCTTACGCTTTTAACAAAACTTGGATCATAGGTTTTCTGATGGATATATTTGGAGCTGTTCTAATGCTGAGAGCGTTATCTCTCGCCCCTGTAAGTCCTTTATTCAGCTACGTACGCCCTTTTCTTTTCGGTTTTTGTTCGGCATTGGTTTATTGGATCTTGGCTGATGGAAATATCAATTGCTGTTTTGATGCCTAAGTGACTTCCCTTGTCATTATGTATTGTCTATCACTATGAAAACAGCATGTAACCTAAATATTTCATCTCTAATTTGATGTTACAAAACCATTTTGTAGATTACTTCTTTCCCAAGAATCCATACCTCACAGGAAAATTCATACAGTTCTGTCAATGTAGCACGGACTTTCTTCCTCGAAATATGCAATTCTTTTCTAATTTCCGTCTTTCAGGTTTCTATAATTCAACCAGTTTCTGGATGTGGACTTGCCATCCTCTCTATTTTTTCACATTTTTATCTGAAGGAAATAATGAATGCTGTCGATTGGATGGGGATTACGCTTGCTGGCATTGGCACCATAGGTAATGTAAGTTCATCTTTGTGTCATTAAGCTAACTATTGTTTTGATCCTTTTTTCGCCTTTCTTGTCTTTTAAAGTTCATTTTATGCATCTGAGGCTTATCTCATGTCTTGTATCTCAGCTTTTTGTGAATGTTCATATTCCTTCCTACTTCTGTAATTTACTTGGCCGTTTTTTTGGGTTTCATTTCAAGGGGTTGGTGCTGGAGGCGAGGAGCAAAAGGCGTCTGCGATATCGATTTTCCATTTGCCATGGCTAGCTTTCATCATTACCATCTTGTTTGTAGGTATCTTATATTATTGACACCTTACGGTTTATAAAAATCTCTGGCCATGTAAACTAGATAAGGCATTTTATGTTAGTTTAGTTTTATGGTCTTGCTTGCAGAAATATAACCTTCTAGTACTCTGTAAATTAAGCTGTAAAAGATGAATGTGTTGAGTTCTAGAAATGATTGGGTATATGTATATGTTCTAACAGGTTCTTCTTAGCGGATGGCTTCATTTCTACAAACGTCAAAGGAAAGAACAAGAGTTGGTAAATTCATTGCTTTAGTATTGACTTTTCACTGGTTTTCTTGTCCTCCCAAAAAATAACATGTTACACATGTATATATGTTGCAGATGGAATTTGAAGTTGTCGAAGAAATAATATACGGCTTAGAATCTGGCATTTTGTTCGGGTACTGTTCTGGCTTGCACTCTTTTGCTTGATGGAATACATTTCCTGCAATTATTATGGTTGAGGATGACTAATAGGTATTAGAACTTTGCTTGACTGTGAGGAATCATGGATCCTGCCCGATCGCGGTGGTATCCTAGTTTGTCTCAAGTTGAATCTTAGCCAGCTTTTCTTTCGACGGTCAGGATGGATTAGAAAATGAAAAGAGAAACTTTTAGTAGTTCTATAATTGTTATGGTTGACTGTATACGGTCATGATGTTTTAGGACTGGAGTATACGCATGCTATAGAGTTTTTAGTCGTTTACACATCTATGGCTTGCGTCGAACCTGATCGACTCCACTCACATTTTGAAAGGGAAATAATCCAATCAGCTTTTCAGATTCATATCAGCAAAATGTTACAATTTAAATCTGCAATTTCAGGATGGCATCTGTAATATCAAAAATGGGATTCTTATTCTTGGAGCAGGGCTTCCACGAAATATTGGTACCAATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGGTACTTTGAACTCTTGGTGATTTGATCTCTTTACCATTCTGTTCTGCATTTAATGTTTATTGTTTTATTGACAGCTTTTGCCTGTGTTGTTCTAGTTCATAATGATGTTGTCTTTTCTTTAGTAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCTGTGGCATCTATCGTCACTGGTGTCGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCCTCGTCACCGACTGCTCGCCTCTTCCTTCTGCTGGGATGGTAAACTAGAAATACATACCCGTTCTATGGTTTCTACATCACTACCTTGACTTGATAAAGAAAATCGTTAACTACATTCCGTGTTTATGATAACTGACTGGACGATTTCGAGGGTCCAGTGCATTAAATACTTGGAAAGGCTTAGCTAGTGAAGATTGATTGACAATTGGATGCTTAATTGCTGTTTTTTCCTCCTAGAAAAGAATGGTCTTTGGTATATACGTACGTTGAATACATGTTAATCTGCCTTTGTGGGTTAATGTTATTTATGCAAGACTTTCTCTGTATACAGGCTGCTAATCATCACAGGTGTTATTCTGCTTGTGAGTTCAGCACGACTGACCCGACGTCTTACTTGGCTATACCGACGATTTAAGCGAAGTGGTGTGGATAGGAGCTTTGGGCATAGATCTGGATCATCTGTGCGCCTACGAGATTCAAGCCCCAGTGCAATCATTCAGACAACCACATTGCAGAATATGATGTTATCATCAAAAGCAAAGGCTGACGCTTGAAGACCGTGAAGACGGTTCATGTGTAGATATAATACCAATGTGGGAGTCCATCCAGGTATGAACATATTCTGATCTGGGTTGGAATTTGGGAATGCACTCCACTTTCTCATGGGTGTGTTTTTTAGAATTATACCTTCTTGCTTGCTTAGGCACCACATGTTTCGAGATCTCCTTTGATTGATAGTTTCAATGTTTGAGGCCATTTCATAATATCCAATTACCCATTATAATGTATGAATTTTTGAAGAATGATGATGATCATGATCTTAGTCAATTTATGAAGATTGCATTTTCTTGTGTTATACTCCAAGGTCCTCTTACTCAAGAAATT

mRNA sequence

TAGAAATGCAAGGGATAGAAACAGGCAAAAGGACAAAGTTCGGTCGTTGGCGCAAAAATTTGGAGGCAATGCTCTGACGTAAATCGCAATTCCCCCTCCAACCATAACCGTACTCTCCGATTTCTTGATTTATTCTTCCCCGTCTCCTTCGATTCTTCTCCGTGTTTCGATTTTTCGGCTTTCAAGGAAGATATGTGGGAACCCATTTGTTTAACTCTGGCCGCCGCCGCCGGCAACAATATCGGCAAAATTATTCAGAAGAAGGGCACCGTCATTCTTCCTCCTCTCTCCTTCAAGCTCAAGGTGATAAGGGCTTACGCTTTTAACAAAACTTGGATCATAGGTTTTCTGATGGATATATTTGGAGCTGTTCTAATGCTGAGAGCGTTATCTCTCGCCCCTGTAAGTCCTTTATTCAGCTACGTACGCCCTTTTCTTTTCGGTTTTTGTTCGGCATTGGTTTATTGGATCTTGGCTGATGGAAATATCAATTGCTGTTTTGATGCCTAAGTGACTTCCCTTGTCATTATGTATTGTCTATCACTATGAAAACAGCATGTAACCTAAATATTTCATCTCTAATTTGATGTTACAAAACCATTTTGTAGATTACTTCTTTCCCAAGAATCCATACCTCACAGGAAAATTCATACAGTTCTGTCAATGTAGCACGGACTTTCTTCCTCGAAATATGCAATTCTTTTCTAATTTCCGTCTTTCAGGTTTCTATAATTCAACCAGTTTCTGGATGTGGACTTGCCATCCTCTCTATTTTTTCACATTTTTATCTGAAGGAAATAATGAATGCTGTCGATTGGATGGGGATTACGCTTGCTGGCATTGGCACCATAGGGGTTGGTGCTGGAGGCGAGGAGCAAAAGGCGTCTGCGATATCGATTTTCCATTTGCCATGGCTAGCTTTCATCATTACCATCTTGTTTGTTCTTCTTAGCGGATGGCTTCATTTCTACAAACGTCAAAGGAAAGAACAAGAGTTGGTAAATTCATTGCTTTAGTATTGACTTTTCACTGGTTTTCTTGTCCTCCCAAAAAATAACATGTTACACATGTATATATGTTGCAGATGGAATTTGAAGTTGTCGAAGAAATAATATACGGCTTAGAATCTGGCATTTTGTTCGGGTACTGTTCTGGCTTGCACTCTTTTGCTTGATGGAATACATTTCCTGCAATTATTATGGTTGAGGATGACTAATAGGTATTAGAACTTTGCTTGACTGTGAGGAATCATGGATCCTGCCCGATCGCGGTGGTATCCTAGTTTGTCTCAAGTTGAATCTTAGCCAGCTTTTCTTTCGACGGTCAGGATGGATTAGAAAATGAAAAGAGAAACTTTTAGTAGTTCTATAATTGTTATGGTTGACTGTATACGGTCATGATGTTTTAGGACTGGAGTATACGCATGCTATAGAGTTTTTAGTCGTTTACACATCTATGGCTTGCGTCGAACCTGATCGACTCCACTCACATTTTGAAAGGGAAATAATCCAATCAGCTTTTCAGATTCATATCAGCAAAATGTTACAATTTAAATCTGCAATTTCAGGATGGCATCTGTAATATCAAAAATGGGATTCTTATTCTTGGAGCAGGGCTTCCACGAAATATTGGTACCAATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCTGTGGCATCTATCGTCACTGGTGTCGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCCTCGTCACCGACTGCTCGCCTCTTCCTTCTGCTGGGATGGCTGCTAATCATCACAGGTGTTATTCTGCTTGTGAGTTCAGCACGACTGACCCGACGTCTTACTTGGCTATACCGACGATTTAAGCGAAGTGGTGTGGATAGGAGCTTTGGGCATAGATCTGGATCATCTGTGCGCCTACGAGATTCAAGCCCCAGTGCAATCATTCAGACAACCACATTGCAGAATATGATGTTATCATCAAAAGCAAAGGCTGACGCTTGAAGACCGTGAAGACGGTTCATGTGTAGATATAATACCAATGTGGGAGTCCATCCAGGTATGAACATATTCTGATCTGGGTTGGAATTTGGGAATGCACTCCACTTTCTCATGGGTGTGTTTTTTAGAATTATACCTTCTTGCTTGCTTAGGCACCACATGTTTCGAGATCTCCTTTGATTGATAGTTTCAATGTTTGAGGCCATTTCATAATATCCAATTACCCATTATAATGTATGAATTTTTGAAGAATGATGATGATCATGATCTTAGTCAATTTATGAAGATTGCATTTTCTTGTGTTATACTCCAAGGTCCTCTTACTCAAGAAATT

Coding sequence (CDS)

ATGGCATCTGTAATATCAAAAATGGGATTCTTATTCTTGGAGCAGGGCTTCCACGAAATATTGGTACCAATATGCATCCTGATAAGTATTTGTTGCAGTGCTACAGGATTTTACTATCAGACTCGAGGACTAAAACATGGGAGGGCAATTGTGGTGTCTACATGTGCTGCTGTGGCATCTATCGTCACTGGTGTCGTTGCTGGTATGCTTGCTTTGGGTGAAGAATTGCCCTCGTCACCGACTGCTCGCCTCTTCCTTCTGCTGGGATGGCTGCTAATCATCACAGGTGTTATTCTGCTTGTGAGTTCAGCACGACTGACCCGACGTCTTACTTGGCTATACCGACGATTTAAGCGAAGTGGTGTGGATAGGAGCTTTGGGCATAGATCTGGATCATCTGTGCGCCTACGAGATTCAAGCCCCAGTGCAATCATTCAGACAACCACATTGCAGAATATGATGTTATCATCAAAAGCAAAGGCTGACGCTTGA

Protein sequence

MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVASIVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRSGVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA

Homology

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BLAST of Carg21728 vs. NCBI nr
Match: XP_022936425.1 (probable magnesium transporter NIPA9 [Cucurbita moschata] >XP_023535010.1 probable magnesium transporter NIPA9 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 306.6 bits (784), Expect = 5.0e-80
Identity = 163/163 (100.00%), Postives = 163/163 (100.00%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS
Sbjct: 243 IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA
Sbjct: 303 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 345

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BLAST of Carg21728 vs. NCBI nr
Match: XP_022977066.1 (probable magnesium transporter NIPA9 [Cucurbita maxima])

HSP 1 Score: 304.7 bits (779), Expect = 1.9e-79
Identity = 162/163 (99.39%), Postives = 162/163 (99.39%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTR LTWLYRRFKRS
Sbjct: 243 IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRHLTWLYRRFKRS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA
Sbjct: 303 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 345

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BLAST of Carg21728 vs. NCBI nr
Match: XP_004141325.1 (PREDICTED: probable magnesium transporter NIPA9 isoform X1 [Cucumis sativus] >KGN55346.1 hypothetical protein Csa_4G646200 [Cucumis sativus])

HSP 1 Score: 287.3 bits (734), Expect = 3.2e-74
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFH+ILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHQILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGEELPSSPT RLFLLLGWLLII GVILLVSS+RL RRLTWLYRRFKRS
Sbjct: 243 IVTGVLAGMLALGEELPSSPTGRLFLLLGWLLIIIGVILLVSSSRLIRRLTWLYRRFKRS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FGHRSGS+VRLRDSSPSAIIQTTTLQN +LSSKAKADA
Sbjct: 303 GVDRNFGHRSGSAVRLRDSSPSAIIQTTTLQN-LLSSKAKADA 344

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BLAST of Carg21728 vs. NCBI nr
Match: XP_022142866.1 (probable magnesium transporter NIPA9 [Momordica charantia])

HSP 1 Score: 287.3 bits (734), Expect = 3.2e-74
Identity = 152/163 (93.25%), Postives = 157/163 (96.32%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISK+GFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKIGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGVVAGMLALGEELPSSPTARLFLLLGWLLII GVILLVSS+RL RR TWL RRFKRS
Sbjct: 243 IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIIIGVILLVSSSRLIRRFTWLSRRFKRS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           G DRSFGHR+GSSVRLRDSSPSAIIQTTTLQN+MLSSK KAD+
Sbjct: 303 GADRSFGHRTGSSVRLRDSSPSAIIQTTTLQNLMLSSKEKADS 345

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BLAST of Carg21728 vs. NCBI nr
Match: XP_008452740.1 (PREDICTED: probable magnesium transporter NIPA9 [Cucumis melo])

HSP 1 Score: 285.8 bits (730), Expect = 9.2e-74
Identity = 152/163 (93.25%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFH+ILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHQILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGEELPSSPT RLFLLLGWLLII GVILLVSS+RL RRLTWLYRRFKR+
Sbjct: 243 IVTGVLAGMLALGEELPSSPTGRLFLLLGWLLIIIGVILLVSSSRLIRRLTWLYRRFKRN 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FGHRSGS VRLRDSSPSAIIQTTTLQN +LSSKAKADA
Sbjct: 303 GVDRNFGHRSGSGVRLRDSSPSAIIQTTTLQN-LLSSKAKADA 344

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BLAST of Carg21728 vs. TAIR10
Match: AT5G11960.1 (Protein of unknown function (DUF803))

HSP 1 Score: 195.7 bits (496), Expect = 2.3e-50
Identity = 101/162 (62.35%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASV+SKMGF+F+EQGF  + +P+CI ISICCS TGF+YQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVVSKMGFVFVEQGFSTMFIPMCISISICCSGTGFFYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGVVAGM ALGE+LP+SP+ RL LLLGWLLI+ GV+LLV+S+RL R L   +RR +++
Sbjct: 243 IVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFRRSRQT 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKAD 163
            ++R F  R  +S   +D++PSA+IQ  TL +++ S     D
Sbjct: 303 SLERGFNIRRTTSHTPKDTNPSAVIQAATLHHLLSSPSKDKD 344

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BLAST of Carg21728 vs. Swiss-Prot
Match: sp|Q8RWH8|NIPA9_ARATH (Probable magnesium transporter NIPA9 OS=Arabidopsis thaliana OX=3702 GN=At5g11960 PE=2 SV=1)

HSP 1 Score: 195.7 bits (496), Expect = 4.1e-49
Identity = 101/162 (62.35%), Postives = 129/162 (79.63%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASV+SKMGF+F+EQGF  + +P+CI ISICCS TGF+YQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVVSKMGFVFVEQGFSTMFIPMCISISICCSGTGFFYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGVVAGM ALGE+LP+SP+ RL LLLGWLLI+ GV+LLV+S+RL R L   +RR +++
Sbjct: 243 IVTGVVAGMFALGEKLPTSPSGRLLLLLGWLLIMLGVVLLVTSSRLIRHLPRSFRRSRQT 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKAD 163
            ++R F  R  +S   +D++PSA+IQ  TL +++ S     D
Sbjct: 303 SLERGFNIRRTTSHTPKDTNPSAVIQAATLHHLLSSPSKDKD 344

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BLAST of Carg21728 vs. TrEMBL
Match: tr|A0A0A0L5B6|A0A0A0L5B6_CUCSA (Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_4G646200 PE=3 SV=1)

HSP 1 Score: 287.3 bits (734), Expect = 2.1e-74
Identity = 153/163 (93.87%), Postives = 159/163 (97.55%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFH+ILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHQILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGEELPSSPT RLFLLLGWLLII GVILLVSS+RL RRLTWLYRRFKRS
Sbjct: 243 IVTGVLAGMLALGEELPSSPTGRLFLLLGWLLIIIGVILLVSSSRLIRRLTWLYRRFKRS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FGHRSGS+VRLRDSSPSAIIQTTTLQN +LSSKAKADA
Sbjct: 303 GVDRNFGHRSGSAVRLRDSSPSAIIQTTTLQN-LLSSKAKADA 344

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BLAST of Carg21728 vs. TrEMBL
Match: tr|A0A1S3BUH9|A0A1S3BUH9_CUCME (Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103493671 PE=3 SV=1)

HSP 1 Score: 285.8 bits (730), Expect = 6.1e-74
Identity = 152/163 (93.25%), Postives = 158/163 (96.93%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGFLFLEQGFH+ILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFLFLEQGFHQILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGEELPSSPT RLFLLLGWLLII GVILLVSS+RL RRLTWLYRRFKR+
Sbjct: 243 IVTGVLAGMLALGEELPSSPTGRLFLLLGWLLIIIGVILLVSSSRLIRRLTWLYRRFKRN 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FGHRSGS VRLRDSSPSAIIQTTTLQN +LSSKAKADA
Sbjct: 303 GVDRNFGHRSGSGVRLRDSSPSAIIQTTTLQN-LLSSKAKADA 344

[Close]

BLAST of Carg21728 vs. TrEMBL
Match: tr|A0A2P5FDY4|A0A2P5FDY4_9ROSA (Probable magnesium transporter OS=Trema orientalis OX=63057 GN=TorRG33x02_082490 PE=3 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.1e-54
Identity = 120/163 (73.62%), Postives = 133/163 (81.60%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGF+FLEQGF  +LVPICI ISICCS TGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFVFLEQGFPRMLVPICISISICCSGTGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGE LPS+PTARL LLLGWLLII GVILLVSS RL R L    RR+ +S
Sbjct: 243 IVTGVLAGMLALGERLPSAPTARLSLLLGWLLIILGVILLVSSTRLVRLLPRRLRRYVQS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FG R   S R RD +PS +IQ  TL +++ SS +K  A
Sbjct: 303 GVDRNFGARQSGSTRGRDPNPSTVIQAATLHHLIASSSSKEKA 345

[Close]

BLAST of Carg21728 vs. TrEMBL
Match: tr|A0A2P4JEG2|A0A2P4JEG2_QUESU (Probable magnesium transporter OS=Quercus suber OX=58331 GN=CFP56_60507 PE=3 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 2.7e-53
Identity = 119/162 (73.46%), Postives = 134/162 (82.72%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGF+F EQGFH +LVPICI IS+CCS TGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 183 MASVISKMGFVFFEQGFHIMLVPICISISVCCSGTGFYYQTRGLKHGRAIVVSTCAAVAS 242

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGE LPS+PTAR  LLLGWLLII GVILLV+S RL R L    R F +S
Sbjct: 243 IVTGVLAGMLALGERLPSAPTARFSLLLGWLLIILGVILLVTSTRLLRHLPRPLRNFIQS 302

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLS-SKAKA 162
           GVDR+F  R   S R+RD++PSA+IQ  TL +++ S SKAKA
Sbjct: 303 GVDRNFNLRRSGSARVRDTNPSAVIQAATLHSLISSPSKAKA 344

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BLAST of Carg21728 vs. TrEMBL
Match: tr|A0A2P5DEM3|A0A2P5DEM3_PARAD (Probable magnesium transporter OS=Parasponia andersonii OX=3476 GN=PanWU01x14_071650 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 7.7e-53
Identity = 118/163 (72.39%), Postives = 131/163 (80.37%), Query Frame = 0


Query: 1   MASVISKMGFLFLEQGFHEILVPICILISICCSATGFYYQTRGLKHGRAIVVSTCAAVAS 60
           MASVISKMGF+FL QGF  +LVPICI ISICCS TGFYYQTRGLKHGRAIVVSTCAAVAS
Sbjct: 206 MASVISKMGFVFLGQGFPTMLVPICISISICCSGTGFYYQTRGLKHGRAIVVSTCAAVAS 265

Query: 61  IVTGVVAGMLALGEELPSSPTARLFLLLGWLLIITGVILLVSSARLTRRLTWLYRRFKRS 120
           IVTGV+AGMLALGE LPS+PTARL LL GWLLII GVILLVSS RL R L    RR+ +S
Sbjct: 266 IVTGVLAGMLALGERLPSAPTARLSLLFGWLLIILGVILLVSSTRLVRLLPRRLRRYVQS 325

Query: 121 GVDRSFGHRSGSSVRLRDSSPSAIIQTTTLQNMMLSSKAKADA 164
           GVDR+FG R   S R RD +PS +IQ  TL +++ SS +K  A
Sbjct: 326 GVDRNFGARQSGSTRGRDPNPSTVIQAATLHHLIASSSSKEKA 368

The following BLAST results are available for this feature:

BLAST of Carg21728 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022936425.1	5.0e-80	100.00	probable magnesium transporter NIPA9 [Cucurbita moschata] >XP_023535010.1 probab...	[more]
XP_022977066.1	1.9e-79	99.39	probable magnesium transporter NIPA9 [Cucurbita maxima]	[more]
XP_004141325.1	3.2e-74	93.87	PREDICTED: probable magnesium transporter NIPA9 isoform X1 [Cucumis sativus] >KG...	[more]
XP_022142866.1	3.2e-74	93.25	probable magnesium transporter NIPA9 [Momordica charantia]	[more]
XP_008452740.1	9.2e-74	93.25	PREDICTED: probable magnesium transporter NIPA9 [Cucumis melo]	[more]

BLAST of Carg21728 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G11960.1	2.3e-50	62.35	Protein of unknown function (DUF803)	[more]

BLAST of Carg21728 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q8RWH8\|NIPA9_ARATH	4.1e-49	62.35	Probable magnesium transporter NIPA9 OS=Arabidopsis thaliana OX=3702 GN=At5g1196...	[more]

BLAST of Carg21728 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0L5B6\|A0A0A0L5B6_CUCSA	2.1e-74	93.87	Probable magnesium transporter OS=Cucumis sativus OX=3659 GN=Csa_4G646200 PE=3 S...	[more]
tr\|A0A1S3BUH9\|A0A1S3BUH9_CUCME	6.1e-74	93.25	Probable magnesium transporter OS=Cucumis melo OX=3656 GN=LOC103493671 PE=3 SV=1	[more]
tr\|A0A2P5FDY4\|A0A2P5FDY4_9ROSA	3.1e-54	73.62	Probable magnesium transporter OS=Trema orientalis OX=63057 GN=TorRG33x02_082490...	[more]
tr\|A0A2P4JEG2\|A0A2P4JEG2_QUESU	2.7e-53	73.46	Probable magnesium transporter OS=Quercus suber OX=58331 GN=CFP56_60507 PE=3 SV=...	[more]
tr\|A0A2P5DEM3\|A0A2P5DEM3_PARAD	7.7e-53	72.39	Probable magnesium transporter OS=Parasponia andersonii OX=3476 GN=PanWU01x14_07...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0015095	magnesium ion transmembrane transporter activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0015693	magnesium ion transport

Vocabulary: **INTERPRO**
Term	Definition
IPR008521	Mg_trans_NIPA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015693	magnesium ion transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0015095	magnesium ion transmembrane transporter activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21728-RA	Carg21728-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008521	Magnesium transporter NIPA	PANTHER	PTHR12570	UNCHARACTERIZED	coord: 1..150
None	No IPR available	PANTHER	PTHR12570:SF9	MAGNESIUM TRANSPORTER NIPA9-RELATED	coord: 1..150
None	No IPR available	SUPERFAMILY	SSF103481	Multidrug resistance efflux transporter EmrE	coord: 21..104

Synteny

The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21728	Silver-seed gourd	carcarB346
Carg21728	Cucumber (Gy14) v2	carcgybB0331
Carg21728	Cucumber (Gy14) v1	carcgyB0377
Carg21728	Cucurbita maxima (Rimu)	carcmaB0448
Carg21728	Cucurbita maxima (Rimu)	carcmaB0449
Carg21728	Cucurbita maxima (Rimu)	carcmaB0450
Carg21728	Cucurbita moschata (Rifu)	carcmoB0439
Carg21728	Cucurbita moschata (Rifu)	carcmoB0440
Carg21728	Cucurbita moschata (Rifu)	carcmoB0442
Carg21728	Cucurbita pepo (Zucchini)	carcpeB0447
Carg21728	Cucurbita pepo (Zucchini)	carcpeB0448
Carg21728	Wild cucumber (PI 183967)	carcpiB0353
Carg21728	Cucumber (Chinese Long) v2	carcuB0347
Carg21728	Cucumber (Chinese Long) v3	carcucB0352
Carg21728	Bottle gourd (USVL1VR-Ls)	carlsiB294
Carg21728	Melon (DHL92) v3.5.1	carmeB0325
Carg21728	Melon (DHL92) v3.6.1	carmedB0334
Carg21728	Watermelon (Charleston Gray)	carwcgB0313
Carg21728	Watermelon (97103) v1	carwmB0312
Carg21728	Watermelon (97103) v2	carwmbB0331
Carg21728	Wax gourd	carwgoB0406