Carg21507 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21507
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Dof zinc finger protein
Location	Cucurbita_argyrosperma_scaffold_146 : 291908 .. 292432 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAGGGGCTGCAGCTGCGACCAATGAAGAAACCAAACCCACACTGATCCAACCAAACTGCCCTCGCTGCGACTCTTCCAACACCAAGTTCTGTTACTACAATAACTACAGCCTTTCACAGCCGCGTTACTTTTGCAAGTCTTGTCGAAGGTACTGGACTCATGGTGGCACTCTCCTTAACGTCCCCATTGGCGGCGGCTCTAGAAAACCAAAGCGCCCCAAAACAATACCCTTTTCTTCCCCTTCTCCGGACACCCTCAATGCGCCGCCGTCTCTCGCCCTAGATGCTGGTGGACCTCTTTCCTATTCCGGTGCTGGGTATCACTCTACTCTCAATGAATCGTCTGTGGCTGTGGATGTGGGGGCTTATAATACGATGTGGACTACCATCAACAACTCCATCAATTCTTGCTCTGCAGGTAATTACGAAAATTTAAGCTTAGAAACTGAAAATAAATGCTGTAATTTGGTCCAAAATCATCATGATCATGATCATCTGCCTTCCTATGCCCGCCCCCTTTGA

mRNA sequence

ATGCAAGGGGCTGCAGCTGCGACCAATGAAGAAACCAAACCCACACTGATCCAACCAAACTGCCCTCGCTGCGACTCTTCCAACACCAAGTTCTGTTACTACAATAACTACAGCCTTTCACAGCCGCGTTACTTTTGCAAGTCTTGTCGAAGGTACTGGACTCATGGTGGCACTCTCCTTAACGTCCCCATTGGCGGCGGCTCTAGAAAACCAAAGCGCCCCAAAACAATACCCTTTTCTTCCCCTTCTCCGGACACCCTCAATGCGCCGCCGTCTCTCGCCCTAGATGCTGGTGGACCTCTTTCCTATTCCGGTGCTGGGTATCACTCTACTCTCAATGAATCGTCTGTGGCTGTGGATGTGGGGGCTTATAATACGATGTGGACTACCATCAACAACTCCATCAATTCTTGCTCTGCAGGTAATTACGAAAATTTAAGCTTAGAAACTGAAAATAAATGCTGTAATTTGGTCCAAAATCATCATGATCATGATCATCTGCCTTCCTATGCCCGCCCCCTTTGA

Coding sequence (CDS)

ATGCAAGGGGCTGCAGCTGCGACCAATGAAGAAACCAAACCCACACTGATCCAACCAAACTGCCCTCGCTGCGACTCTTCCAACACCAAGTTCTGTTACTACAATAACTACAGCCTTTCACAGCCGCGTTACTTTTGCAAGTCTTGTCGAAGGTACTGGACTCATGGTGGCACTCTCCTTAACGTCCCCATTGGCGGCGGCTCTAGAAAACCAAAGCGCCCCAAAACAATACCCTTTTCTTCCCCTTCTCCGGACACCCTCAATGCGCCGCCGTCTCTCGCCCTAGATGCTGGTGGACCTCTTTCCTATTCCGGTGCTGGGTATCACTCTACTCTCAATGAATCGTCTGTGGCTGTGGATGTGGGGGCTTATAATACGATGTGGACTACCATCAACAACTCCATCAATTCTTGCTCTGCAGGTAATTACGAAAATTTAAGCTTAGAAACTGAAAATAAATGCTGTAATTTGGTCCAAAATCATCATGATCATGATCATCTGCCTTCCTATGCCCGCCCCCTTTGA

Protein sequence

MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVDVGAYNTMWTTINNSINSCSAGNYENLSLETENKCCNLVQNHHDHDHLPSYARPL

Homology

[Close]

BLAST of Carg21507 vs. NCBI nr
Match: XP_022927122.1 (dof zinc finger protein DOF5.3-like [Cucurbita moschata])

HSP 1 Score: 334.7 bits (857), Expect = 1.8e-88
Identity = 164/178 (92.13%), Postives = 165/178 (92.70%), Query Frame = 0


Query: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLL 60
           MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTL 
Sbjct: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVA-- 120
           NVPIGGGSRK KRPK IPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVA  
Sbjct: 61  NVPIGGGSRKQKRPKAIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVA 120

Query: 121 --VDVGAYNTMWTTINNSINSCSAGNYENLSLETENKCCNLVQNHHDHDHLPSYARPL 175
             VDVGAYNTMWTT    INSCSAGNYENLSLETEN+CCNLVQNHH HDHLP YARPL
Sbjct: 121 VDVDVGAYNTMWTT----INSCSAGNYENLSLETENECCNLVQNHHHHDHLPPYARPL 174

[Close]

BLAST of Carg21507 vs. NCBI nr
Match: XP_023520221.1 (dof zinc finger protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 271.9 bits (694), Expect = 1.5e-69
Identity = 134/156 (85.90%), Postives = 138/156 (88.46%), Query Frame = 0


Query: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLL 60
           MQGAAAA+NEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTL 
Sbjct: 1   MQGAAAASNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSV--- 120
           NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHST NESSV   
Sbjct: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTFNESSVGAY 120

Query: 121 ------AVDVGAYNTMWTTINNSINSCSAGNYENLS 148
                 + D G +NTMWTTINNSINSCSA +Y   S
Sbjct: 121 AFGLSHSFDHGDHNTMWTTINNSINSCSAESYRKKS 156

[Close]

BLAST of Carg21507 vs. NCBI nr
Match: XP_023001754.1 (dof zinc finger protein DOF5.3-like [Cucurbita maxima])

HSP 1 Score: 260.0 bits (663), Expect = 5.8e-66
Identity = 130/158 (82.28%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MQGAAAATNEETKPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLL 60
           MQGAAAA+NEETK TLIQPNCPRCDSSNTKFC+YNNYSLSQPRYFCKSCRRYWTHGGTL 
Sbjct: 1   MQGAAAASNEETKSTLIQPNCPRCDSSNTKFCHYNNYSLSQPRYFCKSCRRYWTHGGTLR 60

Query: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVD 120
           NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLAL AGGPLSYSGAGYHSTLNE SVA  
Sbjct: 61  NVPIGGGSRKPKRPKTIPFSSPSPDTLNAPPSLALHAGGPLSYSGAGYHSTLNEPSVAXX 120

Query: 121 V-----------------GAYNTMWTTINNSINSCSAG 142
                             G +NTMWTTINNSINSCSAG
Sbjct: 121 XXXXXXXXXXGLSQSFGHGDHNTMWTTINNSINSCSAG 158

[Close]

BLAST of Carg21507 vs. NCBI nr
Match: XP_022954649.1 (dof zinc finger protein DOF2.1-like [Cucurbita moschata])

HSP 1 Score: 139.4 bits (350), Expect = 1.1e-29
Identity = 78/123 (63.41%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 1   MQGAAAATNEETKPTLIQP----NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHG 60
           MQG AA  NEE K TL +P     CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWT G
Sbjct: 1   MQG-AATPNEEMKSTLARPQSTEKCPRCESLNTKFCYYNNYSLSQPRYFCKSCRRYWTKG 60

Query: 61  GTLLNVPIGGGSRKPKRPKTIP-FSS-------PSPDTLNAPPSLALDAGGPLS---YSG 109
           GTL NVPIGGG RK KR K +P FSS        SP+T NAPPSL ++  G      Y G
Sbjct: 61  GTLRNVPIGGGCRKAKRQKPVPSFSSSSAAAIQSSPETQNAPPSLEVETVGVFENSCYLG 120

[Close]

BLAST of Carg21507 vs. NCBI nr
Match: XP_023542171.1 (dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 139.0 bits (349), Expect = 1.5e-29
Identity = 77/123 (62.60%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 1   MQGAAAATNEETKPTLIQP----NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHG 60
           MQG AA  NEE KPTL +P     CPRC+S NTKFCYYNNYSLSQPRYFCKSCRRYWT G
Sbjct: 1   MQG-AATPNEEMKPTLARPQSTEKCPRCESLNTKFCYYNNYSLSQPRYFCKSCRRYWTKG 60

Query: 61  GTLLNVPIGGGSRKPKRPKTIP-FSS-------PSPDTLNAPPSLALDAGGPLS---YSG 109
           GTL NVP+GGG RK KR K +P FSS        S +T NAPPSL ++  G      Y G
Sbjct: 61  GTLRNVPVGGGCRKAKRQKPVPSFSSSSAAAIQSSQETQNAPPSLEVETVGVFENSCYLG 120

[Close]

BLAST of Carg21507 vs. TAIR10
Match: AT3G52440.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 114.0 bits (284), Expect = 9.3e-26
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 17  IQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKT 76
           I P+CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+L NVP+GGG RK +RPK 
Sbjct: 23  ITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPK- 82

Query: 77  IPFSSPSPDTLNAPPSLALDAGGP 101
                 S    N   SL  ++G P
Sbjct: 83  ------SSSGNNTKTSLTANSGNP 99

[Close]

BLAST of Carg21507 vs. TAIR10
Match: AT4G00940.1 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 112.8 bits (281), Expect = 2.1e-25
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC+SSNTKFCYYNNYSL+QPRY CKSCRRYWT GG+L NVP+GGGSRK K+    P 
Sbjct: 69  NCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK-LPFPN 128

Query: 80  SSPSPDTLNAP 91
           SS S  T N P
Sbjct: 129 SSTSSSTKNLP 138

[Close]

BLAST of Carg21507 vs. TAIR10
Match: AT3G61850.4 (Dof-type zinc finger DNA-binding family protein)

HSP 1 Score: 112.1 bits (279), Expect = 3.5e-25
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC+S+NTKFCYYNNYSL+QPRYFCK CRRYWT GG+L NVP+GG SRK KR  T P 
Sbjct: 75  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSST-PL 134

Query: 80  SSPS----PDTLNAP 91
           +SPS    PD LN P
Sbjct: 135 ASPSNPKLPD-LNPP 147

[Close]

BLAST of Carg21507 vs. TAIR10
Match: AT5G60200.1 (TARGET OF MONOPTEROS 6)

HSP 1 Score: 109.8 bits (273), Expect = 1.7e-24
Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 13  KPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPK 72
           +P  +   CPRCDS+NTKFCYYNNYSL+QPRYFCKSCRRYWT GGTL N+P+GGG RK K
Sbjct: 49  QPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNK 108

Query: 73  RPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSV 118
           R      +S +  +L   P  A   G    +S AG++   N   +
Sbjct: 109 RS-----TSSAARSLRTTPEPASHDG--KVFSAAGFNGYSNNEHI 146

[Close]

BLAST of Carg21507 vs. TAIR10
Match: AT3G50410.1 (OBF binding protein 1)

HSP 1 Score: 108.2 bits (269), Expect = 5.1e-24
Identity = 48/64 (75.00%), Postives = 55/64 (85.94%), Query Frame = 0


Query: 21 CPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRK-PKRPKTIPF 80
          CPRCDSSNTKFCYYNNY+ SQPR+FCK+CRRYWTHGGTL +VP+GGG+RK  KR +T   
Sbjct: 32 CPRCDSSNTKFCYYNNYNFSQPRHFCKACRRYWTHGGTLRDVPVGGGTRKSAKRSRTCSN 91

Query: 81 SSPS 84
          SS S
Sbjct: 92 SSSS 95

[Close]

BLAST of Carg21507 vs. Swiss-Prot
Match: sp|Q9SVC5|DOF35_ARATH (Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.7e-24
Identity = 53/84 (63.10%), Postives = 60/84 (71.43%), Query Frame = 0


Query: 17  IQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKT 76
           I P+CPRC SSNTKFCYYNNYSL+QPRYFCK CRRYWT GG+L NVP+GGG RK +RPK 
Sbjct: 23  ITPSCPRCGSSNTKFCYYNNYSLTQPRYFCKGCRRYWTKGGSLRNVPVGGGCRKSRRPK- 82

Query: 77  IPFSSPSPDTLNAPPSLALDAGGP 101
                 S    N   SL  ++G P
Sbjct: 83  ------SSSGNNTKTSLTANSGNP 99

[Close]

BLAST of Carg21507 vs. Swiss-Prot
Match: sp|Q9M161|DOF41_ARATH (Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV=2)

HSP 1 Score: 112.8 bits (281), Expect = 3.7e-24
Identity = 52/71 (73.24%), Postives = 57/71 (80.28%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC+SSNTKFCYYNNYSL+QPRY CKSCRRYWT GG+L NVP+GGGSRK K+    P 
Sbjct: 69  NCPRCNSSNTKFCYYNNYSLAQPRYLCKSCRRYWTEGGSLRNVPVGGGSRKNKK-LPFPN 128

Query: 80  SSPSPDTLNAP 91
           SS S  T N P
Sbjct: 129 SSTSSSTKNLP 138

[Close]

BLAST of Carg21507 vs. Swiss-Prot
Match: sp|Q43385|DOF37_ARATH (Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV=2)

HSP 1 Score: 112.1 bits (279), Expect = 6.4e-24
Identity = 54/75 (72.00%), Postives = 60/75 (80.00%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC+S+NTKFCYYNNYSL+QPRYFCK CRRYWT GG+L NVP+GG SRK KR  T P 
Sbjct: 75  NCPRCNSTNTKFCYYNNYSLTQPRYFCKGCRRYWTEGGSLRNVPVGGSSRKNKRSST-PL 134

Query: 80  SSPS----PDTLNAP 91
           +SPS    PD LN P
Sbjct: 135 ASPSNPKLPD-LNPP 147

[Close]

BLAST of Carg21507 vs. Swiss-Prot
Match: sp|O24463|PBF_MAIZE (Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1)

HSP 1 Score: 110.9 bits (276), Expect = 1.4e-23
Identity = 48/69 (69.57%), Postives = 54/69 (78.26%), Query Frame = 0


Query: 21  CPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPFS 80
           CPRCDS+NTKFCYYNNYS+SQPRYFCK+CRRYWTHGGTL NVPIGGG RK K        
Sbjct: 62  CPRCDSNNTKFCYYNNYSMSQPRYFCKACRRYWTHGGTLRNVPIGGGCRKNKHASRFVLG 121

Query: 81  SPSPDTLNA 90
           S +  + +A
Sbjct: 122 SHTSSSSSA 130

[Close]

BLAST of Carg21507 vs. Swiss-Prot
Match: sp|Q84TE9|DOF53_ARATH (Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 3.2e-23
Identity = 55/105 (52.38%), Postives = 68/105 (64.76%), Query Frame = 0


Query: 13  KPTLIQPNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPK 72
           +P  +   CPRCDS+NTKFCYYNNYSL+QPRYFCKSCRRYWT GGTL N+P+GGG RK K
Sbjct: 49  QPPELALRCPRCDSTNTKFCYYNNYSLTQPRYFCKSCRRYWTKGGTLRNIPVGGGCRKNK 108

Query: 73  RPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSV 118
           R      +S +  +L   P  A   G    +S AG++   N   +
Sbjct: 109 RS-----TSSAARSLRTTPEPASHDG--KVFSAAGFNGYSNNEHI 146

[Close]

BLAST of Carg21507 vs. TrEMBL
Match: tr|A0A199UL55|A0A199UL55_ANACO (Dof zinc finger protein DOF3.5 OS=Ananas comosus OX=4615 GN=ACMD2_20484 PE=4 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 2.5e-25
Identity = 65/120 (54.17%), Postives = 78/120 (65.00%), Query Frame = 0


Query: 7   ATNEETKPTLIQ-PNCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIG 66
           A +   KP + Q PNCPRCDS+NTKFCYYNNYSLSQPRYFCK+CRRYWT GG+L NVP+G
Sbjct: 21  AADRRWKPNVDQAPNCPRCDSANTKFCYYNNYSLSQPRYFCKACRRYWTKGGSLRNVPVG 80

Query: 67  GGSRKPKRPKTIPFSSPSPDTLNAPPSLALDAGGPLSYSGAGYHSTLNESSVAVDVGAYN 126
           GG RK +RPK    ++  P +    P LALD   P            ++ SVA D  AY+
Sbjct: 81  GGCRKNRRPKPKVSNAAGPRSF-VRPDLALDGAVP-----------ADQPSVATDASAYD 128

[Close]

BLAST of Carg21507 vs. TrEMBL
Match: tr|F2EG91|F2EG91_HORVV (Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24
Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 4   AAAATNEETKPTLIQP-NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNV 63
           AAAA  ++++P   Q   CPRC S NTKFCYYNNYS+SQPRYFCK+CRRYWTHGG+L NV
Sbjct: 20  AAAAAEKKSRPKPEQKVECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNV 79

Query: 64  PIGGGSRKPKRPKT-----IPFSSPSPDTLNAPPS 93
           PIGGG RKPKRP T     +  +S S  T   PPS
Sbjct: 80  PIGGGCRKPKRPGTSDAHKLGMASSSEPTGVVPPS 114

[Close]

BLAST of Carg21507 vs. TrEMBL
Match: tr|Q9ZS77|Q9ZS77_HORVU (DNA binding protein OS=Hordeum vulgare OX=4513 GN=BPBF PE=2 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 4.7e-24
Identity = 60/95 (63.16%), Postives = 69/95 (72.63%), Query Frame = 0


Query: 4   AAAATNEETKPTLIQP-NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNV 63
           AAAA  ++++P   Q   CPRC S NTKFCYYNNYS+SQPRYFCK+CRRYWTHGG+L NV
Sbjct: 20  AAAAAEKKSRPKPEQKVECPRCKSGNTKFCYYNNYSMSQPRYFCKACRRYWTHGGSLRNV 79

Query: 64  PIGGGSRKPKRPKT-----IPFSSPSPDTLNAPPS 93
           PIGGG RKPKRP T     +  +S S  T   PPS
Sbjct: 80  PIGGGCRKPKRPGTSDAHKLGMASSSEPTGVVPPS 114

[Close]

BLAST of Carg21507 vs. TrEMBL
Match: tr|A0A058ZYQ7|A0A058ZYQ7_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00405 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.2e-24
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC SSNTKFCYYNNYSLSQPRYFCK+CRRYWT GG+L NVP+GGGSRK KRP +   
Sbjct: 59  NCPRCSSSNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSFS 118

Query: 80  SSPS------PDTLNAPPSL 94
           SSPS      PD +  P SL
Sbjct: 119 SSPSSKIIKLPDLVVGPSSL 138

[Close]

BLAST of Carg21507 vs. TrEMBL
Match: tr|A0A058ZZS6|A0A058ZZS6_EUCGR (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00405 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 6.2e-24
Identity = 57/80 (71.25%), Postives = 62/80 (77.50%), Query Frame = 0


Query: 20  NCPRCDSSNTKFCYYNNYSLSQPRYFCKSCRRYWTHGGTLLNVPIGGGSRKPKRPKTIPF 79
           NCPRC SSNTKFCYYNNYSLSQPRYFCK+CRRYWT GG+L NVP+GGGSRK KRP +   
Sbjct: 36  NCPRCSSSNTKFCYYNNYSLSQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRPSSSFS 95

Query: 80  SSPS------PDTLNAPPSL 94
           SSPS      PD +  P SL
Sbjct: 96  SSPSSKIIKLPDLVVGPSSL 115

The following BLAST results are available for this feature:

BLAST of Carg21507 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927122.1	1.8e-88	92.13	dof zinc finger protein DOF5.3-like [Cucurbita moschata]	[more]
XP_023520221.1	1.5e-69	85.90	dof zinc finger protein 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_023001754.1	5.8e-66	82.28	dof zinc finger protein DOF5.3-like [Cucurbita maxima]	[more]
XP_022954649.1	1.1e-29	63.41	dof zinc finger protein DOF2.1-like [Cucurbita moschata]	[more]
XP_023542171.1	1.5e-29	62.60	dof zinc finger protein DOF2.1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg21507 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52440.1	9.3e-26	63.10	Dof-type zinc finger DNA-binding family protein	[more]
AT4G00940.1	2.1e-25	73.24	Dof-type zinc finger DNA-binding family protein	[more]
AT3G61850.4	3.5e-25	72.00	Dof-type zinc finger DNA-binding family protein	[more]
AT5G60200.1	1.7e-24	52.38	TARGET OF MONOPTEROS 6	[more]
AT3G50410.1	5.1e-24	75.00	OBF binding protein 1	[more]

BLAST of Carg21507 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SVC5\|DOF35_ARATH	1.7e-24	63.10	Dof zinc finger protein DOF3.5 OS=Arabidopsis thaliana OX=3702 GN=DOF3.5 PE=3 SV...	[more]
sp\|Q9M161\|DOF41_ARATH	3.7e-24	73.24	Dof zinc finger protein DOF4.1 OS=Arabidopsis thaliana OX=3702 GN=DOF4.1 PE=2 SV...	[more]
sp\|Q43385\|DOF37_ARATH	6.4e-24	72.00	Dof zinc finger protein DOF3.7 OS=Arabidopsis thaliana OX=3702 GN=DOF3.7 PE=1 SV...	[more]
sp\|O24463\|PBF_MAIZE	1.4e-23	69.57	Dof zinc finger protein PBF OS=Zea mays OX=4577 GN=PBF PE=1 SV=1	[more]
sp\|Q84TE9\|DOF53_ARATH	3.2e-23	52.38	Dof zinc finger protein DOF5.3 OS=Arabidopsis thaliana OX=3702 GN=DOF5.3 PE=2 SV...	[more]

BLAST of Carg21507 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A199UL55\|A0A199UL55_ANACO	2.5e-25	54.17	Dof zinc finger protein DOF3.5 OS=Ananas comosus OX=4615 GN=ACMD2_20484 PE=4 SV=...	[more]
tr\|F2EG91\|F2EG91_HORVV	4.7e-24	63.16	Predicted protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=2 SV=1	[more]
tr\|Q9ZS77\|Q9ZS77_HORVU	4.7e-24	63.16	DNA binding protein OS=Hordeum vulgare OX=4513 GN=BPBF PE=2 SV=1	[more]
tr\|A0A058ZYQ7\|A0A058ZYQ7_EUCGR	6.2e-24	71.25	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00405 PE=4 SV...	[more]
tr\|A0A058ZZS6\|A0A058ZZS6_EUCGR	6.2e-24	71.25	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_K00405 PE=4 SV...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003677	DNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006355	regulation of transcription, DNA-templated

Vocabulary: **INTERPRO**
Term	Definition
IPR003851	Znf_Dof

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003677	DNA binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21507-RA	Carg21507-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003851	Zinc finger, Dof-type	PFAM	PF02701	zf-Dof	coord: 20..73 e-value: 4.1E-32 score: 110.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS01361	ZF_DOF_1	coord: 21..57
IPR003851	Zinc finger, Dof-type	PRODOM	PD007478		coord: 4..73 e-value: 7.0E-24 score: 271.0
IPR003851	Zinc finger, Dof-type	PROSITE	PS50884	ZF_DOF_2	coord: 19..73 score: 27.885
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..90
None	No IPR available	PANTHER	PTHR31992	FAMILY NOT NAMED	coord: 14..97

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21507	Cla019706	Watermelon (97103) v1	carwmB0949
Carg21507	Csa1G074960	Cucumber (Chinese Long) v2	carcuB0963
Carg21507	MELO3C002616	Melon (DHL92) v3.5.1	carmeB0930
Carg21507	ClCG03G008130	Watermelon (Charleston Gray)	carwcgB0926
Carg21507	CSPI01G12230	Wild cucumber (PI 183967)	carcpiB0986
Carg21507	Cucsa.126800	Cucumber (Gy14) v1	carcgyB1068
Carg21507	CmaCh18G003800	Cucurbita maxima (Rimu)	carcmaB1298
Carg21507	CmoCh13G006550	Cucurbita moschata (Rifu)	carcmoB1268
Carg21507	Lsi02G007650	Bottle gourd (USVL1VR-Ls)	carlsiB866
Carg21507	Cp4.1LG20g04350	Cucurbita pepo (Zucchini)	carcpeB1314
Carg21507	CsGy1G012250	Cucumber (Gy14) v2	carcgybB0936
Carg21507	MELO3C002616.2	Melon (DHL92) v3.6.1	carmedB0936
Carg21507	CsaV3_1G012420	Cucumber (Chinese Long) v3	carcucB0991
Carg21507	Cla97C03G059430	Watermelon (97103) v2	carwmbB1000
Carg21507	Bhi03G000307	Wax gourd	carwgoB1098

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21507	Carg14618	Silver-seed gourd	carcarB179
Carg21507	Carg07776	Silver-seed gourd	carcarB564

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21507	Cucurbita maxima (Rimu)	carcmaB1300
Carg21507	Silver-seed gourd	carcarB206
Carg21507	Silver-seed gourd	carcarB509
Carg21507	Cucumber (Gy14) v2	carcgybB0937
Carg21507	Cucumber (Gy14) v1	carcgyB1067
Carg21507	Cucurbita maxima (Rimu)	carcmaB1296
Carg21507	Cucurbita maxima (Rimu)	carcmaB1297
Carg21507	Cucurbita maxima (Rimu)	carcmaB1299
Carg21507	Cucurbita moschata (Rifu)	carcmoB1267
Carg21507	Cucurbita moschata (Rifu)	carcmoB1269
Carg21507	Cucurbita moschata (Rifu)	carcmoB1270
Carg21507	Cucurbita pepo (Zucchini)	carcpeB1312
Carg21507	Cucurbita pepo (Zucchini)	carcpeB1313
Carg21507	Cucurbita pepo (Zucchini)	carcpeB1315
Carg21507	Wild cucumber (PI 183967)	carcpiB0987
Carg21507	Cucumber (Chinese Long) v2	carcuB0964
Carg21507	Cucumber (Chinese Long) v3	carcucB0992
Carg21507	Bottle gourd (USVL1VR-Ls)	carlsiB865
Carg21507	Melon (DHL92) v3.5.1	carmeB0931
Carg21507	Melon (DHL92) v3.6.1	carmedB0937
Carg21507	Watermelon (Charleston Gray)	carwcgB0923
Carg21507	Watermelon (Charleston Gray)	carwcgB0924
Carg21507	Watermelon (97103) v1	carwmB0950
Carg21507	Watermelon (97103) v1	carwmB0951
Carg21507	Watermelon (97103) v2	carwmbB0998
Carg21507	Watermelon (97103) v2	carwmbB0997
Carg21507	Wax gourd	carwgoB1102