Carg21483 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21483
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CTTNBP 2 amino-terminal-like protein
Location	Cucurbita_argyrosperma_scaffold_146 : 149264 .. 152086 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTTAGCAATGGCGATACTGTAAATTGGCGCAGTCAATTGGAATCTGAAACTTTCGGAAATTTCTGGGTTTAGCTAAAACAACCACTTCCGAAACGATGATTCTAATGGAATTTCTAATCCAAATTCCAAAGCCCCCTTTTCACCTTCTGGTAAACTGTGGAATTTTGTTGTGATGGTAATGGTAGCCCACACCTTCAATCTCTCTCTCTCTCTTCTGTCGCTGTTCTCTCTCTCTATATTACGAGTTTGGTAGCTGCTTAAGTTTTTGATAACACCGAAAAACCCTGAAACTTTTCCCTCCAATTCTTCTCCTTCATAATTAAGCTGCCATGAGCTACAAATCCAGCTATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAGTGAGTTCGCCCAATTTGTCCCCCATCGGTTTCTATTTCGTTTTAGATTTTGCTGTTTATGTCTGAATTTTCTTATCTGGACTGTTGGATTCCCGGTATGAAAGCTGAAATGAATTGGGTTTAGATATCTGTTTTTCTTTTGGATCATAACATGCGAGTGTTTGGATATTCATAACTTAATTTTGACAAATTTGTACGTTATATCTATGACTTTTCTTCTAAATTGCATTCTAAAGGGCACCTTGAACATCAAGATGAGCTCGTAGTTCTTGCCTTCTCCCTGAATTTTGCAGTATTTCCTATGAACACTGAGTTTTATCAGCCTTATCTTTCTTCAACTCCATAAGGGGGTGGGGGGGACAACCTAGTGGGCGTATAATTCGTTATTTACTTTTTAGAATTCTCTTCCATTTCAAAATAAGCAATCTCATTATCACAGGACGGTATCATCCTGTAATTATGGATACTAGGCAAGGACATGGTAGTTGTTCGTTTAATGGTCACTTCTTGTTTTGCCACTTTCGGCCAAGTGCTTCTGATGTTTTGCCCCACCAACTCACTCATCATGTCAACCTCAATGCCTTCCATATCCCACATGCCCCTTGCCTCTGTCATGGCCATGGAGTCACTTTCCCCCCTTGTCTCGTTAGTATTCTCATACAATCAAATTGGTTAGACGAAGAATCGACTTGAGGATGATTTTTTTTTTTAATTTTACATCCTAAAATATAAAGTTGCTGGCTGAAACCGTGTCAAGAATTTGTGACACATCTGTAATCTATGGATGCAGCTTGCAGCCTTCAAAGAAACATATGAGGCCTACCTAGTTGTCCTGTCTAATTACTCAAGAACAGGGCTGATTCTTGTATGTGCAAAGGTGTTGGGAATACTAACAAGGGCATACTTTTAATTACCTAGAAGTTGTTTGAGTTGAGTGGCTATAAATAGAGTGAGTTTAGGGGTTTGGGAGGTACCTAGAATTTGGATCCCAGTTTTGGATTTAGTATCTCTACCATTTTCTGTTTTGGTTTTAGTAGTGATTTAACAGGAAATATAGTACTACTTCTAGTAATGGATTGTTGTATCTCAATACAAATTTGTGCTTTCTTTAAGCTACAAAAATGGTAAGCACTAATGAGGGAAGAAGAGATATACACCATAGATTGCTTCTTTAACTGGTCTATGATCGATTCCCTATAATTGTGAGGTCCAACATCGATTGGAGAGGAAAATGATTGTGAAGCTCGAAGGGGGGTGGACACGTTGGCGGTGGGCCAGCGAGGATGCTGGGTCCCGAAGGGGGTGGATTGTGAGTTCCCACGTTGATTGGAGAGAGAACAAGTGCACGTTGGGCCCTAAAAGGGGGTCGATTCTGAGATCCAATATTGATTGGAGAGGGAAACGATTGTCAGCGAGGACACTGGGCCTCGAAGAGGGGTGGATTGTGAGATCCCACATTGGTTGGAGAAGAGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCTTAGCAGACTCGTTTTAAAAATCTTGAGGGGAAGCCTGAGAGGGAAAGCCCAAAGAGAACATTATTTGCTAGCGGTAGGCTCGGGCCATTAGAATAACATTGTAAGATCTCAAGACTTGCTGCTTTCTCGCAAGGGCCGACCCTTAGTGACAAAGTCATTGGCTGCTGCCCGTTTACAACGTGAGAAAAGTTATCCGTTTGTTTTGCAGTTCTGTTTGTCAAATATATTGTGCTGTTTCTTTATACTGCTGTCTGTCTTATGATATGTTGGACCTTGTCCTTTCCTCTTGAACTTGTCCTTTCATCTACAAGTAAGGAAGTTGATTACCGGTAAAATTCCAAAGGCATAACAATCTTCAGCCATCTACATTTTTGTTTTGTTTATATGCAGATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGAGATCGAACATACCGAGGATGCAAAAGAGTTCACTAGTTTTCGATTGATTCAAGCAAAACTGAGGCTGTTTTTCCCC

mRNA sequence

CTTTAGCAATGGCGATACTGTAAATTGGCGCAGTCAATTGGAATCTGAAACTTTCGGAAATTTCTGGGTTTAGCTAAAACAACCACTTCCGAAACGATGATTCTAATGGAATTTCTAATCCAAATTCCAAAGCCCCCTTTTCACCTTCTGGTAAACTGTGGAATTTTGTTGTGATGGTAATGGTAGCCCACACCTTCAATCTCTCTCTCTCTCTTCTGTCGCTGTTCTCTCTCTCTATATTACGAGTTTGGTAGCTGCTTAAGTTTTTGATAACACCGAAAAACCCTGAAACTTTTCCCTCCAATTCTTCTCCTTCATAATTAAGCTGCCATGAGCTACAAATCCAGCTATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGAGATCGAACATACCGAGGATGCAAAAGAGTTCACTAGTTTTCGATTGATTCAAGCAAAACTGAGGCTGTTTTTCCCC

Coding sequence (CDS)

ATGTCGGAGCGGGGAAATTCGTCTGAAACTTTTGGGGATAATATGGGTGAAGAAGGTTATGGATGGTCCCCGACTGGGGCTCCTCTTGACGTCCAGAGAGAGGACCACTGGAGGCACTTCGACAACTCCGTCGATGCAGTCTCTTTTGGTTTTGTTGCCACTGCCATTCTCGTCTCAATGTTCTTGCTCATGGCTATCTTTGAAAGGTTTTTGCGACCTACTCCGACCGCTTTCTCTCACGCCGGCCGTCGGACCCACCTTGACCCTGAGGCTCAGATGGGGTTCGCTGGAAAGCTTGGCCACCCATCACCCAAAATGACTGTGTATTCCTGTGGAGTTTCAGTGCTAATGCCTGGAGATCATATTCCTACATATATTGCCCACCCGGCTCCCGTCCCGTGTCCCCCTGAACGCATTCCATGGCCACAACATCAACATAATGACTTATCCTATGCCACAACCAGTTCCCATATCACTGAAAACTCGAGTTCCTTATGA

Protein sequence

MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL

Homology

[Close]

BLAST of Carg21483 vs. NCBI nr
Match: XP_023001755.1 (uncharacterized protein LOC111495798 [Cucurbita maxima])

HSP 1 Score: 341.3 bits (874), Expect = 1.9e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGHNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]

BLAST of Carg21483 vs. NCBI nr
Match: XP_022927571.1 (uncharacterized protein LOC111434363 [Cucurbita moschata])

HSP 1 Score: 340.9 bits (873), Expect = 2.4e-90
Identity = 163/165 (98.79%), Postives = 163/165 (98.79%), Query Frame = 0


Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPV CPPERIPWPQHQHNDLSYATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVSCPPERIPWPQHQHNDLSYATTSSHFTENSSSL 165

[Close]

BLAST of Carg21483 vs. NCBI nr
Match: XP_023519551.1 (uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 3.0e-88
Identity = 159/165 (96.36%), Postives = 161/165 (97.58%), Query Frame = 0


Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MSERGNSSETFG NMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSERGNSSETFGHNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FLLMAIFERFLRPTPTAFSH GRRTHLDPEAQMGFAGKLGH SPKMTVYSCGVSVLMPGD
Sbjct: 61  FLLMAIFERFLRPTPTAFSHTGRRTHLDPEAQMGFAGKLGHSSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHND+S+ATTSSH TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDISHATTSSHFTENSSSL 165

[Close]

BLAST of Carg21483 vs. NCBI nr
Match: XP_022139852.1 (uncharacterized protein LOC111010664 [Momordica charantia])

HSP 1 Score: 304.7 bits (779), Expect = 1.9e-79
Identity = 145/165 (87.88%), Postives = 152/165 (92.12%), Query Frame = 0


Query: 1   MSERGNSSETFGDNMGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSM 60
           MS+RGN SETF  +MGEE YGWSP GAPLD+ REDHWRHFDNSVDAVSFGFVATAILVSM
Sbjct: 1   MSKRGNFSETFRHHMGEEDYGWSPIGAPLDLHREDHWRHFDNSVDAVSFGFVATAILVSM 60

Query: 61  FLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGD 120
           FL+MAIFERFLRP PTAFSH   R+HLDPEAQ+ FAGKLGHPSPKMTVYSCGVSVLMPGD
Sbjct: 61  FLVMAIFERFLRPAPTAFSHTAGRSHLDPEAQVRFAGKLGHPSPKMTVYSCGVSVLMPGD 120

Query: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNDLSYATTSSHITENSSSL 166
           HIPTYIAHPAPVPCPPERIPWPQHQHN  SYATTSSH+TENSSSL
Sbjct: 121 HIPTYIAHPAPVPCPPERIPWPQHQHNTTSYATTSSHLTENSSSL 165

[Close]

BLAST of Carg21483 vs. NCBI nr
Match: XP_004146588.1 (PREDICTED: uncharacterized protein LOC101205831 [Cucumis sativus] >KGN64640.1 hypothetical protein Csa_1G073000 [Cucumis sativus])

HSP 1 Score: 297.4 bits (760), Expect = 3.1e-77
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74
           MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1   MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 134
           PTAFSHAG RTHLDPEAQMGFAGKL HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC
Sbjct: 61  PTAFSHAGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 120

Query: 135 PPERIPWPQHQHNDLSYATTSSHITENSSS 165
            PERIPWPQHQHND+SY T SSH  ENSSS
Sbjct: 121 APERIPWPQHQHNDISYVTNSSHFIENSSS 150

[Close]

BLAST of Carg21483 vs. TAIR10
Match: AT1G11120.1 (unknown protein)

HSP 1 Score: 109.0 bits (271), Expect = 2.8e-24
Identity = 67/142 (47.18%), Postives = 84/142 (59.15%), Query Frame = 0


Query: 22  WSPTGAPLDVQREDHWR-HFDNSVDAVSFGFVATAILVSMFLLMAIFERFLR---PTPTA 81
           W P GAP++++RE+ W+  FD+SV+AVSFGFVATAIL+SMFL+MAIFER +R        
Sbjct: 15  WPPIGAPMNLRREEPWKSQFDDSVNAVSFGFVATAILISMFLVMAIFERLIRXXXXXXXX 74

Query: 82  FSHAGRRTHLDPEAQMGFAG---KLGHPSPK--------------------------MTV 131
                 R     ++++GF G   KLG+ SPK                          MTV
Sbjct: 75  XXXXXXRVLPGMDSRVGFNGAATKLGYQSPKASNNRIVFSFSFNILKSELFIVIILRMTV 134

[Close]

BLAST of Carg21483 vs. TAIR10
Match: AT1G09812.1 (unknown protein)

HSP 1 Score: 89.4 bits (220), Expect = 2.3e-18
Identity = 53/118 (44.92%), Postives = 70/118 (59.32%), Query Frame = 0


Query: 27  APLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFS--HAGRR 86
           +P +   E  WR    S++A+SFGFVATAIL+SMFL+MAIFE   RP  ++F   H  R+
Sbjct: 11  SPREGDSEGPWRS-STSMNAISFGFVATAILISMFLIMAIFEHLFRPENSSFDSPHQIRQ 70

Query: 87  THLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWP 143
              D  +Q           P  TV    VSV+MPG+ +P++IA PAP+PC  E I WP
Sbjct: 71  RQRDGSSQFQKLADQASMVPVSTVVD--VSVVMPGEKLPSHIALPAPLPCRREGIHWP 125

[Close]

BLAST of Carg21483 vs. TAIR10
Match: AT1G58007.1 (unknown protein)

HSP 1 Score: 78.2 bits (191), Expect = 5.3e-15
Identity = 45/103 (43.69%), Postives = 61/103 (59.22%), Query Frame = 0


Query: 42  NSVDAVSFGFVATAILVSMFLLMAIFERFLRPTPTAFSHAGRRTHLDPEAQMGFAGKLGH 101
           +S++A+SFGFVATAIL+ MF++MAI E   R      S       +D  +Q     KL  
Sbjct: 21  SSMNAISFGFVATAILILMFIIMAILEHLFR------SDHSSSYDVDDSSQF---QKLAE 80

Query: 102 PSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPPERIPWPQH 145
            +  + V +  VSV+MPGD +P+Y+A PAP PC  E I WP H
Sbjct: 81  KASMVPVTTSDVSVVMPGDKLPSYVALPAPFPCRREGIRWPSH 114

[Close]

BLAST of Carg21483 vs. TAIR10
Match: AT4G28170.1 (unknown protein)

HSP 1 Score: 72.8 bits (177), Expect = 2.2e-13
Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 0


Query: 25  TGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFL--RPTPTAFSHAG 84
           T  PL    E   R F++SV+AV FG VAT +L+++FLL+A FERF+  +PTP+      
Sbjct: 43  TAGPLAADEEGQGR-FESSVNAVPFGLVATGVLIAIFLLIAFFERFMFVKPTPS------ 102

Query: 85  RRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPCPP 137
                 P     F       SPKM V    +SVLMPG+ +PT+IA     PCPP
Sbjct: 103 ------PPLDQKFP---PFASPKMDVCKREISVLMPGEDVPTFIAQ----PCPP 136

[Close]

BLAST of Carg21483 vs. TrEMBL
Match: tr|A0A0A0LRU5|A0A0A0LRU5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 2.0e-77
Identity = 140/150 (93.33%), Postives = 142/150 (94.67%), Query Frame = 0


Query: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74
           MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1   MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 134
           PTAFSHAG RTHLDPEAQMGFAGKL HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC
Sbjct: 61  PTAFSHAGGRTHLDPEAQMGFAGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 120

Query: 135 PPERIPWPQHQHNDLSYATTSSHITENSSS 165
            PERIPWPQHQHND+SY T SSH  ENSSS
Sbjct: 121 APERIPWPQHQHNDISYVTNSSHFIENSSS 150

[Close]

BLAST of Carg21483 vs. TrEMBL
Match: tr|A0A1S3B529|A0A1S3B529_CUCME (uncharacterized protein LOC103486098 OS=Cucumis melo OX=3656 GN=LOC103486098 PE=4 SV=1)

HSP 1 Score: 297.0 bits (759), Expect = 2.7e-77
Identity = 139/150 (92.67%), Postives = 143/150 (95.33%), Query Frame = 0


Query: 15  MGEEGYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 74
           MGEEGYGWSP GAPLDVQ+EDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT
Sbjct: 1   MGEEGYGWSPIGAPLDVQKEDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRPT 60

Query: 75  PTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 134
           PTAFSHAG RTHLDPEAQMGF GKL HPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC
Sbjct: 61  PTAFSHAGGRTHLDPEAQMGFTGKLAHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVPC 120

Query: 135 PPERIPWPQHQHNDLSYATTSSHITENSSS 165
            PERIPWPQHQHND+SY T SSH+TE+SSS
Sbjct: 121 APERIPWPQHQHNDISYVTNSSHLTESSSS 150

[Close]

BLAST of Carg21483 vs. TrEMBL
Match: tr|A0A2I4DZ71|A0A2I4DZ71_9ROSI (uncharacterized protein LOC108984832 OS=Juglans regia OX=51240 GN=LOC108984832 PE=4 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.2e-54
Identity = 107/151 (70.86%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 15  MGEEGYGWSPTGAPL-DVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP 74
           M  EGY W+P G+PL +VQRE+HWRHFDNSV+AVSFGFVATAIL+SMFL+MAIFERFLRP
Sbjct: 1   MVSEGYAWAPIGSPLNNVQREEHWRHFDNSVNAVSFGFVATAILISMFLVMAIFERFLRP 60

Query: 75  TPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVP 134
           T TA S +G   H D EAQMGF  KLGHPSPKMTVY+ GVSVLMPGD IPT+IAHPAP+P
Sbjct: 61  TSTALSPSGGHNHRDLEAQMGFNAKLGHPSPKMTVYASGVSVLMPGDDIPTFIAHPAPMP 120

Query: 135 CPPERIPWPQHQHNDLSYATTSSHITENSSS 165
           CPPERI WP HQ   +    ++S+++ NSSS
Sbjct: 121 CPPERISWPHHQQISIPSLNSNSNLSTNSSS 151

[Close]

BLAST of Carg21483 vs. TrEMBL
Match: tr|F6GZ84|F6GZ84_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0116g00630 PE=4 SV=1)

HSP 1 Score: 216.1 bits (549), Expect = 6.0e-53
Identity = 103/144 (71.53%), Postives = 122/144 (84.72%), Query Frame = 0


Query: 15  MGEE-GYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP 74
           MGE+ G+ W PTGAP +VQRE+HWRHFDNSV+AVSFGFVATAIL+SMFL+MAIFERFLRP
Sbjct: 1   MGEQSGWSWPPTGAPANVQREEHWRHFDNSVNAVSFGFVATAILISMFLVMAIFERFLRP 60

Query: 75  TPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVP 134
           TP + S A  R   D E+QMGF GKLGHPSPKMTVY+ GVSVLMPG+ IPT+IAHPAPVP
Sbjct: 61  TPPSLSPATGRDRGDVESQMGFNGKLGHPSPKMTVYARGVSVLMPGEDIPTFIAHPAPVP 120

Query: 135 CPPERIPWPQHQHNDLSYATTSSH 158
           CPP+RIPWP  +HN  +  +++S+
Sbjct: 121 CPPDRIPWPLKEHNSTANPSSNSN 144

[Close]

BLAST of Carg21483 vs. TrEMBL
Match: tr|F6I2C5|F6I2C5_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0445g00040 PE=4 SV=1)

HSP 1 Score: 214.2 bits (544), Expect = 2.3e-52
Identity = 106/144 (73.61%), Postives = 121/144 (84.03%), Query Frame = 0


Query: 15  MGEE-GYGWSPTGAPLDVQREDHWRHFDNSVDAVSFGFVATAILVSMFLLMAIFERFLRP 74
           MGE+ G+ W PTGAP +VQRE+HWRHFDNSV+AVSFGFVATAIL+SMFL+MAIFERFLRP
Sbjct: 1   MGEQSGWSWPPTGAPANVQREEHWRHFDNSVNAVSFGFVATAILISMFLVMAIFERFLRP 60

Query: 75  TPTAFSHAGRRTHLDPEAQMGFAGKLGHPSPKMTVYSCGVSVLMPGDHIPTYIAHPAPVP 134
           TP + S A  R   D E+QMGF GKLGHPSPKMTVY+ GVSVLMPG+ IPT+IAHPAPVP
Sbjct: 61  TPPSLSPATGRDRGDVESQMGFNGKLGHPSPKMTVYARGVSVLMPGEDIPTFIAHPAPVP 120

Query: 135 CPPERIPWPQHQHNDLSYATTSSH 158
           CPP+RIPWP  +HN  S A  SS+
Sbjct: 121 CPPDRIPWPLKEHN--STANPSSN 142

The following BLAST results are available for this feature:

BLAST of Carg21483 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023001755.1	1.9e-90	98.79	uncharacterized protein LOC111495798 [Cucurbita maxima]	[more]
XP_022927571.1	2.4e-90	98.79	uncharacterized protein LOC111434363 [Cucurbita moschata]	[more]
XP_023519551.1	3.0e-88	96.36	uncharacterized protein LOC111782932 [Cucurbita pepo subsp. pepo]	[more]
XP_022139852.1	1.9e-79	87.88	uncharacterized protein LOC111010664 [Momordica charantia]	[more]
XP_004146588.1	3.1e-77	93.33	PREDICTED: uncharacterized protein LOC101205831 [Cucumis sativus] >KGN64640.1 hy...	[more]

BLAST of Carg21483 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G11120.1	2.8e-24	47.18	unknown protein	[more]
AT1G09812.1	2.3e-18	44.92	unknown protein	[more]
AT1G58007.1	5.3e-15	43.69	unknown protein	[more]
AT4G28170.1	2.2e-13	42.11	unknown protein	[more]

BLAST of Carg21483 vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg21483 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LRU5\|A0A0A0LRU5_CUCSA	2.0e-77	93.33	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073000 PE=4 SV=1	[more]
tr\|A0A1S3B529\|A0A1S3B529_CUCME	2.7e-77	92.67	uncharacterized protein LOC103486098 OS=Cucumis melo OX=3656 GN=LOC103486098 PE=...	[more]
tr\|A0A2I4DZ71\|A0A2I4DZ71_9ROSI	3.2e-54	70.86	uncharacterized protein LOC108984832 OS=Juglans regia OX=51240 GN=LOC108984832 P...	[more]
tr\|F6GZ84\|F6GZ84_VITVI	6.0e-53	71.53	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_10s0116g00630 PE=4 SV=...	[more]
tr\|F6I2C5\|F6I2C5_VITVI	2.3e-52	73.61	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_00s0445g00040 PE=4 SV=...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21483-RA	Carg21483-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..27
None	No IPR available	PANTHER	PTHR33728:SF1	SUBFAMILY NOT NAMED	coord: 18..158
None	No IPR available	PANTHER	PTHR33728	FAMILY NOT NAMED	coord: 18..158

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21483	Cla019469	Watermelon (97103) v1	carwmB0948
Carg21483	Csa7G047290	Cucumber (Chinese Long) v2	carcuB0965
Carg21483	Csa1G073000	Cucumber (Chinese Long) v2	carcuB0963
Carg21483	MELO3C002568	Melon (DHL92) v3.5.1	carmeB0930
Carg21483	ClCG03G005650	Watermelon (Charleston Gray)	carwcgB0925
Carg21483	CSPI01G11750	Wild cucumber (PI 183967)	carcpiB0986
Carg21483	Cucsa.147860	Cucumber (Gy14) v1	carcgyB1069
Carg21483	Cucsa.126400	Cucumber (Gy14) v1	carcgyB1068
Carg21483	CmaCh18G003500	Cucurbita maxima (Rimu)	carcmaB1298
Carg21483	CmaCh13G006650	Cucurbita maxima (Rimu)	carcmaB1297
Carg21483	CmoCh13G006850	Cucurbita moschata (Rifu)	carcmoB1268
Carg21483	CmoCh18G003280	Cucurbita moschata (Rifu)	carcmoB1269
Carg21483	Lsi02G007140	Bottle gourd (USVL1VR-Ls)	carlsiB866
Carg21483	Cp4.1LG20g04120	Cucurbita pepo (Zucchini)	carcpeB1314
Carg21483	Cp4.1LG09g08550	Cucurbita pepo (Zucchini)	carcpeB1312
Carg21483	CsGy1G011720	Cucumber (Gy14) v2	carcgybB0936
Carg21483	MELO3C002568.2	Melon (DHL92) v3.6.1	carmedB0936
Carg21483	CsaV3_7G004240	Cucumber (Chinese Long) v3	carcucB0993
Carg21483	CsaV3_1G011900	Cucumber (Chinese Long) v3	carcucB0991
Carg21483	Cla97C03G056960	Watermelon (97103) v2	carwmbB0999
Carg21483	Bhi08G001567	Wax gourd	carwgoB1099

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21483	Carg14648	Silver-seed gourd	carcarB179

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21483	Cucurbita maxima (Rimu)	carcmaB1300
Carg21483	Silver-seed gourd	carcarB564
Carg21483	Cucumber (Gy14) v1	carcgyB1067
Carg21483	Cucurbita maxima (Rimu)	carcmaB1296
Carg21483	Cucurbita moschata (Rifu)	carcmoB1267
Carg21483	Cucurbita moschata (Rifu)	carcmoB1270
Carg21483	Cucurbita pepo (Zucchini)	carcpeB1313
Carg21483	Cucurbita pepo (Zucchini)	carcpeB1315
Carg21483	Wild cucumber (PI 183967)	carcpiB0987
Carg21483	Cucumber (Chinese Long) v2	carcuB0964
Carg21483	Cucumber (Chinese Long) v3	carcucB0992
Carg21483	Bottle gourd (USVL1VR-Ls)	carlsiB865
Carg21483	Melon (DHL92) v3.5.1	carmeB0931
Carg21483	Melon (DHL92) v3.6.1	carmedB0937
Carg21483	Watermelon (Charleston Gray)	carwcgB0923
Carg21483	Watermelon (Charleston Gray)	carwcgB0924
Carg21483	Watermelon (97103) v1	carwmB0950
Carg21483	Watermelon (97103) v1	carwmB0951
Carg21483	Watermelon (97103) v2	carwmbB0998
Carg21483	Watermelon (97103) v2	carwmbB0997
Carg21483	Wax gourd	carwgoB1098