Carg21440 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21440
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Ras-related protein
Location	Cucurbita_argyrosperma_scaffold_103 : 371509 .. 375275 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATAAATTTAATTTTCAATCGCTGTCGTGCCTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGGGGGAAAGGAGAGAGCGTGTTTTGCTTCCAAGAGAGAGATAGGCATCTGTCTTGATTGTTTTGATTTCCTTTTTCGCCATTCTTAACCCTTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTGTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGAGACTTTTCTCCCCTTTTTGATTCTTAAAGTTTGATTTCTTTTTTCTGTCCGGATTTTGATGCCGAATCGCGATGTGGGTCTCTTTGATTTTCCTTTTCCGGAATTGGGTTTTCATTATTGTTCTTCTTTTCATCGTCAATTCGATTTGGTTTAATCCTTGGTAGTCTTGATTTGTGGCTGAATTCTGATTAGGGTTTTGTTTTGTTCGCGAATATCCGAATTTTTTTCTGGTTTGATTGTATTTCTGTTGGTTGTAATTATGAAATCTCTGTTTGCATTCTCTATATATCATTAACTTTTGATGATTGTTGGGATAATCCCTTTCCAATTTATAATTCGGTCGTGATCTAAGTTAATTCTCTGCATTTTAATTAGCAGATAGTTCAGTAGGATCGTGATTATTGCCCTTAGTTTCAGCAATCAATTGTATTAGACGGTATCCCTTTTTGTTTTTCGAGATTTTTTTACATGTTCTTCCCCTCTTTGTCCAATTCTGATATTAAATCATACCTCATATTATCCTTGCCCCTGTTTTTGCTATCCAATTGTCTCACTTCAATGGCTATCATACATGGAATGTTATTTGTTGAAAAGGGAAGGGGCTGGATGGACTATGTTTAGCTACAACTATTTTGGAACAACACATGAAATCCAGTTTATTTTACTTTCGTTTTTCGCTCAGGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGTTTGTATTATAAACCATTTGGATTTGGCTTTTGAAATTTCTGAAATGTCTTTCTGTCTTGGTTGTATGTAATCGTTTTAATTGTTCAATTATGTAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTTGAAAACTCTTGATGGGTTGCATATGGTCTGAGAACAAAATAATTGTAATTGTGCTTGGGCATTACATCTTCAAATTCATTGTACAAGCCATCGGCCATTTCCGTGAAATATGTTTGGGATGAAAGAAGTGTTATTATATGTCTATGAATTAAGTACCAACCATTTTGTCTTTATAATTAATTGCTAAAAGAACTTGGAAGTTGTGACGGCCCAAGTCTACCACTAGCATATATTGTCCTCTTTGGGCTTTCCCTTTTGAGTTTCTCCTCAAGGTTTTTAAAACGCATCTGCTAGGTAGAGGTTTCCACACCTTTATAAAAAATGTTACGTTCTCCTCCCCAACCGATGTGGGTTCGCACAATCCACCTCTGTTCAGGGCCAACATCCTCGTTGGCACTCATTCCCTTCTTCAATCGATGTGGAACCCTCACAATCCACCTCCCTTCGGGGCCCAGCATCCTTGCTACCACATTGCCTCGTGTCCACCCCTTTGAGGGCTTAGCCTCTTTGTTGGCAGATCGCCCGGTGTTTGACTCTGATACCATTTGTAACTGGCCAAGCCCACCGCTAGCAGATAGTGTTCTCTTTGGGCTTTTCCTTTCAGGCTTCCCCTTAAGGTTTTAAAATGTGTCTGCTAAGAAGAGGTTTCTACATCCTTATAAAGAATGCTTTGTTCTCCTCCCCAATCGACGTGGAATCTCACCGAAGTTCTTTTTCATTTTTAATTATTTATAAAAAAAAAATAGCTAACAAAATCTTTGAAATTCACCAACAGATATTTGACTTTAGATAAGGAAACTTCAACAGAATTGATGTTTTGAACTCTTAACCAAGTGGGGGCTTTTGTGAAGTTATTAAGAGGCTTAGAGATTAATAAATCATGTCAAAGTGGTGCTTGATAAAGGAAACTGTGATGGGTTTGTATATGACCTGAAGTGGGATTGTGTGTGTGTGTATTAGAACGGGGAGCTAGGAGTAATGCTTTTTTAGGAAGCGACATACTCTATACATATCAGGCTTCACTAGGGATTATTCATCCTTTTATATACTACTGTAATCGAATTACAATTTTTATTCCTTTTCATACCACAACTCTTTTGTGTAACCTCTATTTGATTGTAGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGTAGTCTTACTGTTAAGTGGCCTAAATTTACATTGGAAGAGCATCTGGATTGAACATACTGTGAACTTTTAGCAAGTGAAACTAGTGTCTACCTTATTTTTTTTTTTTACCAATTGGATCGTCTCCTTTTATCAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCCCAGTTTTCCTTTTTCTGTAGTACTTTGTTGAACTGGGATGCATTTCATACAAATAAAAAAGTATACTTCTGCTAGTGAAGATCTTTTCTAGTTGGAATTTTGTGATATTTTTGTACTAAGCTGTGACAATTGGTTCAATTGTTGCTCGTGTAATTGTGCATCGTACAGGACGCTCAAACGTATGCACAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGGTTAGTAACTAGGACCTATGAGTTCAAGGGACCGCCCCGCCCCCCACCCCCCTACCGGAATGAAAGAGCTGAAACAAGATTTCTCTTTTATGCTTACGATATCTCTGGATCATAGACTTAAGGAATTCCGTGTCATATTTGTTTGATCAATGGGGATTTTGATTTATAAATGCAATATCCGACACGAGTTTCATGAGTTTGGGTTCATTAAGTCGCGATAGCAAACCCGCAGCTTGGGACAAGTAAATTTATATTAAGTAGATTCATCTTCTTTATCTGGAGGTTCACAAAGTTATAGAAGTCCCTGCCCTTGACCCCACTCCCAACCACACACACACAACACACACACAAAGGTTCACAAAGTTGATTTTGATTCCTTGTTTTTCGATGCAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAGAACGTCATTGTTCTACTCTTAAGGTGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGAAGAGGAAAAAAAAAAAAAGGGGTTGTTGATTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCATAAATGTGGCAGACTCGCTACTTTGTGTTTATATGATAACCTTCGGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTCATTGGGGTAAACTTCGAAATCGGGACATCTACCTGTTTGGAATGACTTTTTA

mRNA sequence

AATAAATTTAATTTTCAATCGCTGTCGTGCCTAATCGAGTTGTTCTTGTTATTGTTCATCTTGAGGGGGGAAAGGAGAGAGCGTGTTTTGCTTCCAAGAGAGAGATAGGCATCTGTCTTGATTGTTTTGATTTCCTTTTTCGCCATTCTTAACCCTTTTTGTTCTGTCAACGCCTGTTCTTCCACGATTGTCTTCGATTTTTGTCTCGATTGCGGTTTACGGCCATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTTGAAAACTCTTGATGGGTTGCATATGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCCCAGTTTTCCTTTTTCTGACGCTCAAACGTATGCACAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAGAACGTCATTGTTCTACTCTTAAGGTGTCTGCAGAATGACCTCCATTTGTATGCAGAATTCTTAAGGAAAAGAAGAGGAAAAAAAAAAAAAGGGGTTGTTGATTGATGTTGAATTTATTATGATGTGTAAATTGACTGCTGTGTTTAGATGATATGCTTCTTTTGCAGCCACCATAAATGTGGCAGACTCGCTACTTTGTGTTTATATGATAACCTTCGGCTTGCTTCACACATGCACAGTTTTCTTGGCTTCTTTTTTCATTGGGGTAAACTTCGAAATCGGGACATCTACCTGTTTGGAATGACTTTTTA

Coding sequence (CDS)

ATGGCCACCAGCGGAAACAAGAACATTAATGCCAAATTAGTGCTTCTTGGTGATGTTGGTGCTGGGAAGTCGAGTCTAGTGTTGCGTTTTGTTAAAGGGCAATTTGTTGAGTTTCAGGAATCGACGATCGGTGCAGCCTTTTTCTCTCAAACATTGGCTGTAAATGATGCCACTGTGAAATTTGAAATCTGGGACACAGCTGGGCAGGAGAGATACCACAGTTTGGCTCCAATGTATTACAGGGGTGCAGCTGCAGCTATTATCGTCTACGATATTACTAACCAAGTAAGTGGCGTTTTGAAAACTCTTGATGGGTTGCATATGGCTTCATTTGATCGGGCAAAAAAATGGGTTCAAGAACTTCAAGCACAAGGCAATCCGAATATGGTCATGGCTTTAGCTGGGAACAAATCAGATATGTTGGATTCTAGGAGTGTTGCTGCAGAGGCAAGTACTCCCAACCCCAGTTTTCCTTTTTCTGACGCTCAAACGTATGCACAGGAGAATGGCCTTTTCTTCATGGAAACCTCTGCAAAAAGTGCTGCTAATGTCAATGATATCTTCTATGAAATAGCAAAGAGATTACCACGAGTGCAACCGGTACAGAATACACCAGGGATGGTTCTAGACAGACCTGCTGAAAGGGTTGCAAGCACGTCGTGTTGCTCGTAG

Protein sequence

MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQELQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKSAANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS

Homology

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BLAST of Carg21440 vs. NCBI nr
Match: XP_022927321.1 (ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related protein RABF2b-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.5 bits (955), Expect = 1.0e-99
Identity = 199/223 (89.24%), Postives = 199/223 (89.24%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSDMLDSRSVAAE           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 199

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BLAST of Carg21440 vs. NCBI nr
Match: XP_023000928.1 (ras-related protein RABF2b-like [Cucurbita maxima])

HSP 1 Score: 370.5 bits (950), Expect = 3.9e-99
Identity = 198/223 (88.79%), Postives = 198/223 (88.79%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSDMLDSRSVAAE           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERV STSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVPSTSCCS 199

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BLAST of Carg21440 vs. NCBI nr
Match: XP_008459092.1 (PREDICTED: ras-related protein RABF2b [Cucumis melo])

HSP 1 Score: 366.3 bits (939), Expect = 7.3e-98
Identity = 195/223 (87.44%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ              SFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------GSFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LDSR VAAE           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDSRKVAAE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

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BLAST of Carg21440 vs. NCBI nr
Match: XP_004145451.1 (PREDICTED: ras-related protein RABF2b [Cucumis sativus])

HSP 1 Score: 365.2 bits (936), Expect = 1.6e-97
Identity = 195/223 (87.44%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ              SFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------GSFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LDSR VAAE           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDSRKVAAE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQNT GMVLDRPAERVASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNTTGMVLDRPAERVASTSCCS 199

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BLAST of Carg21440 vs. NCBI nr
Match: XP_022142715.1 (ras-related protein RABF2b [Momordica charantia])

HSP 1 Score: 364.8 bits (935), Expect = 2.1e-97
Identity = 194/223 (87.00%), Postives = 195/223 (87.44%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ              SFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------GSFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LDSR VA E           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDSRKVAVE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

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BLAST of Carg21440 vs. TAIR10
Match: AT4G19640.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 323.6 bits (828), Expect = 9.9e-89
Identity = 172/224 (76.79%), Postives = 186/224 (83.04%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LD+R V AE           DAQTYAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDARKVTAE-----------DAQTYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NV +IFYEIA+RLPRVQP +N  GMVL DR  +R  S+SCC+
Sbjct: 181 ATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSCCA 200

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BLAST of Carg21440 vs. TAIR10
Match: AT5G45130.1 (RAB homolog 1)

HSP 1 Score: 317.4 bits (812), Expect = 7.1e-87
Identity = 170/224 (75.89%), Postives = 184/224 (82.14%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNK+D+LD+R V+AE           +A+ YAQEN LFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKADLLDARKVSAE-----------EAEIYAQENSLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NV DIFYEIAKRLPRVQP +N  GMVL + P     S+SCC+
Sbjct: 181 ATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSCCA 200

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BLAST of Carg21440 vs. TAIR10
Match: AT3G54840.1 (Ras-related small GTP-binding family protein)

HSP 1 Score: 196.4 bits (498), Expect = 1.8e-50
Identity = 104/195 (53.33%), Postives = 133/195 (68.21%), Query Frame = 0


Query: 7   KNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDA-TVKFEIWD 66
           KN+  KLVLLGD G GKS +VLRFV+GQF    + T+GA+F SQT+A+ D+ TVKFEIWD
Sbjct: 30  KNLRVKLVLLGDSGVGKSCIVLRFVRGQFDATSKVTVGASFLSQTIALQDSTTVKFEIWD 89

Query: 67  TAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQELQAQG 126
           TAGQERY +LAP+YYRGA  A+IVYDIT+               SF +A+ WV+ELQ  G
Sbjct: 90  TAGQERYSALAPLYYRGAGVAVIVYDITSP-------------ESFKKAQYWVKELQKHG 149

Query: 127 NPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKSAANVN 186
           +P++VMAL GNK+D+ + R V           P  D    A++NG+FF+ETSAK+A N+N
Sbjct: 150 SPDIVMALVGNKADLHEKREV-----------PTEDGMELAEKNGMFFIETSAKTADNIN 200

Query: 187 DIFYEIAKRLPRVQP 201
            +F EI KRLPR  P
Sbjct: 210 QLFEEIGKRLPRPAP 200

[Close]

BLAST of Carg21440 vs. TAIR10
Match: AT1G16920.1 (RAB GTPase homolog A1B)

HSP 1 Score: 144.1 bits (362), Expect = 1.1e-34
Identity = 77/187 (41.18%), Postives = 112/187 (59.89%), Query Frame = 0


Query: 12  KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
           K+VL+GD G GKS+L+ RF K +F    +STIG  F ++TL V+   VK +IWDTAGQER
Sbjct: 15  KVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQER 74

Query: 72  YHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQELQAQGNPNMVM 131
           Y ++   YYRGA  A++VYD+T +             A+F+   +W++EL+   +PN+V+
Sbjct: 75  YRAITSAYYRGAVGALLVYDVTRR-------------ATFENVDRWLKELKNHTDPNIVV 134

Query: 132 ALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKSAANVNDIFYEI 191
            L GNKSD+    +V           P  D ++YA++  L FMETSA  A NV D F E+
Sbjct: 135 MLVGNKSDLRHLLAV-----------PTEDGKSYAEQESLCFMETSALEATNVEDAFAEV 177

Query: 192 AKRLPRV 199
             ++ R+
Sbjct: 195 LTQIYRI 177

[Close]

BLAST of Carg21440 vs. TAIR10
Match: AT4G18800.1 (RAB GTPase homolog A1D)

HSP 1 Score: 143.3 bits (360), Expect = 1.8e-34
Identity = 81/223 (36.32%), Postives = 124/223 (55.61%), Query Frame = 0


Query: 12  KLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEIWDTAGQER 71
           K+VL+GD G GKS+L+ RF + +F    +STIG  F +++L VN+  +K +IWDTAGQER
Sbjct: 15  KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQER 74

Query: 72  YHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQELQAQGNPNMVM 131
           Y ++   YYRGA  A++VYD+T               ++F+  ++W++EL+   +PN+V+
Sbjct: 75  YRAITSAYYRGAVGALLVYDVTRH-------------STFENVERWLRELRDHTDPNIVV 134

Query: 132 ALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKSAANVNDIFYEI 191
            L GNKSD+    +V  E           DA+++A+   L+FMETSA  + NV + F E+
Sbjct: 135 MLVGNKSDLRHLVAVQTE-----------DAKSFAENESLYFMETSALESTNVENAFSEV 194

Query: 192 AKRLPRV---------QPVQNTP--GMVLDRPAERVASTSCCS 224
             ++  V         +   N P  G  +D     V  T CCS
Sbjct: 195 LTQIYHVVSKKAMEAGEDSGNVPSKGEKIDVDVSAVKKTGCCS 213

[Close]

BLAST of Carg21440 vs. Swiss-Prot
Match: sp|Q9SN68|RAF2B_ARATH (Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 1.8e-87
Identity = 172/224 (76.79%), Postives = 186/224 (83.04%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA +GNK+INAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MAAAGNKSINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+D+TNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDVTNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LD+R V AE           DAQTYAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDARKVTAE-----------DAQTYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NV +IFYEIA+RLPRVQP +N  GMVL DR  +R  S+SCC+
Sbjct: 181 ATNVKEIFYEIARRLPRVQPTENPTGMVLPDRAMDRAVSSSCCA 200

[Close]

BLAST of Carg21440 vs. Swiss-Prot
Match: sp|P31582|RAF2A_ARATH (Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1)

HSP 1 Score: 317.4 bits (812), Expect = 1.3e-85
Identity = 170/224 (75.89%), Postives = 184/224 (82.14%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+SGNKNINAKLVLLGDVGAGKSSLVLRFVK QFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MASSGNKNINAKLVLLGDVGAGKSSLVLRFVKDQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIV+DITNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVFDITNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNK+D+LD+R V+AE           +A+ YAQEN LFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKADLLDARKVSAE-----------EAEIYAQENSLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NV DIFYEIAKRLPRVQP +N  GMVL + P     S+SCC+
Sbjct: 181 ATNVKDIFYEIAKRLPRVQPAENPTGMVLPNGPGATAVSSSCCA 200

[Close]

BLAST of Carg21440 vs. Swiss-Prot
Match: sp|P31583|RHN1_NICPL (Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1)

HSP 1 Score: 298.9 bits (764), Expect = 4.7e-80
Identity = 161/224 (71.88%), Postives = 177/224 (79.02%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+S + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS TLAVN+ATVK
Sbjct: 1   MASSSHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTLAVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+               SF RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITSS-------------DSFARAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQ QGNPNMVMALAGNK+D+ D R V AE           +A+ YA+ENGLFFMETSAK+
Sbjct: 121 LQKQGNPNMVMALAGNKADLEDRRKVTAE-----------EARLYAEENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NVN IFYEIAKRLPR QP QN  GMVL DR AE   +TSCC+
Sbjct: 181 AVNVNAIFYEIAKRLPRAQPAQNPAGMVLVDRAAEGTRATSCCT 200

[Close]

BLAST of Carg21440 vs. Swiss-Prot
Match: sp|P29687|RAB5_TOBAC (Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 2.6e-78
Identity = 156/224 (69.64%), Postives = 176/224 (78.57%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MA+  + N+NAKLVLLGD+GAGKSSLV+RFVKGQF+EFQESTIGAAFFS T++VN+ATVK
Sbjct: 1   MASRRHNNLNAKLVLLGDMGAGKSSLVIRFVKGQFLEFQESTIGAAFFSSTVSVNNATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDIT+               S  RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITS-------------TESLARAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQ QGNPNMVMALAGNK+D+ D R V AE           +A+ YA+ENGLFFMETSAK+
Sbjct: 121 LQKQGNPNMVMALAGNKADLEDKRKVTAE-----------EARLYAEENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NVNDIFYEIAKRLPR QP QN  GMVL D+PA+   + SCC+
Sbjct: 181 ATNVNDIFYEIAKRLPRAQPAQNPAGMVLEDKPAQGSQAASCCT 200

[Close]

BLAST of Carg21440 vs. Swiss-Prot
Match: sp|Q98932|RAB5C_CHICK (Ras-related protein Rab-5C OS=Gallus gallus OX=9031 GN=RAB5C PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.1e-60
Identity = 130/226 (57.52%), Postives = 158/226 (69.91%), Query Frame = 0


Query: 4   SGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVKFEI 63
           +GNK    KLVLLG+   GKSSLVLRFVKGQF E+QESTIGAAF +QT+ ++D TVKFEI
Sbjct: 15  AGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEI 74

Query: 64  WDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQELQA 123
           WDTAGQERYHSLAPMYYRGA AAI+VYDITN               +F RAK WV+ELQ 
Sbjct: 75  WDTAGQERYHSLAPMYYRGAQAAIVVYDITN-------------TDTFVRAKNWVKELQR 134

Query: 124 QGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKSAAN 183
           Q +PN+V+ALAGNK+D+   R+V            F DAQTYA +N L FMETSAK+A N
Sbjct: 135 QASPNIVIALAGNKADLATKRAV-----------DFQDAQTYADDNSLLFMETSAKTAMN 194

Query: 184 VNDIFYEIAKRLPRVQPVQNTPG-----MVLD-RPAERVASTSCCS 224
           VN+IF  IAK+LP+ +P QN PG      V+D + + + + + CCS
Sbjct: 195 VNEIFMAIAKKLPKNEP-QNAPGGPGRNRVVDLQESSQPSRSQCCS 215

[Close]

BLAST of Carg21440 vs. TrEMBL
Match: tr|A0A1S3C8W6|A0A1S3C8W6_CUCME (ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1)

HSP 1 Score: 366.3 bits (939), Expect = 4.8e-98
Identity = 195/223 (87.44%), Postives = 196/223 (87.89%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ              SFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------GSFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LDSR VAAE           DAQTYAQENGLFFMETSAKS
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDSRKVAAE-----------DAQTYAQENGLFFMETSAKS 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVLDRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQPVQN PGMVLDRPAERVASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPVQNAPGMVLDRPAERVASTSCCS 199

[Close]

BLAST of Carg21440 vs. TrEMBL
Match: tr|A0A023HJ60|A0A023HJ60_HEVBR (Rab5 OS=Hevea brasiliensis OX=3981 PE=2 SV=1)

HSP 1 Score: 348.6 bits (893), Expect = 1.0e-92
Identity = 187/224 (83.48%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MAT+GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATAGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASFDRAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFDRAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNK+D+LD+R VAAE           +AQ YAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKADLLDTRKVAAE-----------EAQAYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           AANVNDIFYEIAKRLPRVQP QN  GMVL DRPAER ASTSCCS
Sbjct: 181 AANVNDIFYEIAKRLPRVQPAQNPSGMVLMDRPAERTASTSCCS 200

[Close]

BLAST of Carg21440 vs. TrEMBL
Match: tr|A0A061GC75|A0A061GC75_THECC (RAB isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029326 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 3.0e-92
Identity = 186/224 (83.04%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNK+D+LD+R VAAE           +AQTYAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKADLLDARKVAAE-----------EAQTYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A+NVNDIFYEIAKRLPRVQP QN  GMVL DRPAER AS SCCS
Sbjct: 181 ASNVNDIFYEIAKRLPRVQPAQNPAGMVLMDRPAERTASASCCS 200

[Close]

BLAST of Carg21440 vs. TrEMBL
Match: tr|A0A061GD41|A0A061GD41_THECC (Ras-related small GTP-binding family protein isoform 2 OS=Theobroma cacao OX=3641 GN=TCM_029326 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.0e-92
Identity = 186/224 (83.04%), Postives = 193/224 (86.16%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             ASF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------ASFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNK+D+LD+R VAAEA+           QTYAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKADLLDARKVAAEAT-----------QTYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A+NVNDIFYEIAKRLPRVQP QN  GMVL DRPAER AS SCCS
Sbjct: 181 ASNVNDIFYEIAKRLPRVQPAQNPAGMVLMDRPAERTASASCCS 200

[Close]

BLAST of Carg21440 vs. TrEMBL
Match: tr|A0A067KJV3|A0A067KJV3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09407 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 4.0e-92
Identity = 186/224 (83.04%), Postives = 192/224 (85.71%), Query Frame = 0


Query: 1   MATSGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60
           MAT+GNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK
Sbjct: 1   MATAGNKNINAKLVLLGDVGAGKSSLVLRFVKGQFVEFQESTIGAAFFSQTLAVNDATVK 60

Query: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQVSGVLKTLDGLHMASFDRAKKWVQE 120
           FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ             +SF+RAKKWVQE
Sbjct: 61  FEIWDTAGQERYHSLAPMYYRGAAAAIIVYDITNQ-------------SSFERAKKWVQE 120

Query: 121 LQAQGNPNMVMALAGNKSDMLDSRSVAAEASTPNPSFPFSDAQTYAQENGLFFMETSAKS 180
           LQAQGNPNMVMALAGNKSD+LDSR VAAE           +AQ YAQENGLFFMETSAK+
Sbjct: 121 LQAQGNPNMVMALAGNKSDLLDSRKVAAE-----------EAQVYAQENGLFFMETSAKT 180

Query: 181 AANVNDIFYEIAKRLPRVQPVQNTPGMVL-DRPAERVASTSCCS 224
           A NVNDIFYEIAKRLPRVQP QN  GMVL DRPAER ASTSCCS
Sbjct: 181 ATNVNDIFYEIAKRLPRVQPAQNPSGMVLMDRPAERTASTSCCS 200

The following BLAST results are available for this feature:

BLAST of Carg21440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927321.1	1.0e-99	89.24	ras-related protein RABF2b-like [Cucurbita moschata] >XP_023519554.1 ras-related...	[more]
XP_023000928.1	3.9e-99	88.79	ras-related protein RABF2b-like [Cucurbita maxima]	[more]
XP_008459092.1	7.3e-98	87.44	PREDICTED: ras-related protein RABF2b [Cucumis melo]	[more]
XP_004145451.1	1.6e-97	87.44	PREDICTED: ras-related protein RABF2b [Cucumis sativus]	[more]
XP_022142715.1	2.1e-97	87.00	ras-related protein RABF2b [Momordica charantia]	[more]

BLAST of Carg21440 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G19640.1	9.9e-89	76.79	Ras-related small GTP-binding family protein	[more]
AT5G45130.1	7.1e-87	75.89	RAB homolog 1	[more]
AT3G54840.1	1.8e-50	53.33	Ras-related small GTP-binding family protein	[more]
AT1G16920.1	1.1e-34	41.18	RAB GTPase homolog A1B	[more]
AT4G18800.1	1.8e-34	36.32	RAB GTPase homolog A1D	[more]

BLAST of Carg21440 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SN68\|RAF2B_ARATH	1.8e-87	76.79	Ras-related protein RABF2b OS=Arabidopsis thaliana OX=3702 GN=RABF2B PE=1 SV=1	[more]
sp\|P31582\|RAF2A_ARATH	1.3e-85	75.89	Ras-related protein RABF2a OS=Arabidopsis thaliana OX=3702 GN=RABF2A PE=1 SV=1	[more]
sp\|P31583\|RHN1_NICPL	4.7e-80	71.88	Ras-related protein RHN1 OS=Nicotiana plumbaginifolia OX=4092 GN=RHN1 PE=2 SV=1	[more]
sp\|P29687\|RAB5_TOBAC	2.6e-78	69.64	Ras-related protein Rab5 OS=Nicotiana tabacum OX=4097 GN=RAB5 PE=2 SV=1	[more]
sp\|Q98932\|RAB5C_CHICK	4.1e-60	57.52	Ras-related protein Rab-5C OS=Gallus gallus OX=9031 GN=RAB5C PE=1 SV=1	[more]

BLAST of Carg21440 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C8W6\|A0A1S3C8W6_CUCME	4.8e-98	87.44	ras-related protein RABF2b OS=Cucumis melo OX=3656 GN=LOC103498306 PE=4 SV=1	[more]
tr\|A0A023HJ60\|A0A023HJ60_HEVBR	1.0e-92	83.48	Rab5 OS=Hevea brasiliensis OX=3981 PE=2 SV=1	[more]
tr\|A0A061GC75\|A0A061GC75_THECC	3.0e-92	83.04	RAB isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_029326 PE=4 SV=1	[more]
tr\|A0A061GD41\|A0A061GD41_THECC	4.0e-92	83.04	Ras-related small GTP-binding family protein isoform 2 OS=Theobroma cacao OX=364...	[more]
tr\|A0A067KJV3\|A0A067KJV3_JATCU	4.0e-92	83.04	Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09407 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003924	GTPase activity
GO:0005525	GTP binding

Vocabulary: **INTERPRO**
Term	Definition
IPR027417	P-loop_NTPase
IPR005225	Small_GTP-bd_dom
IPR001806	Small_GTPase

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21440-RA	Carg21440-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 52..74 score: 46.26 coord: 127..140 score: 43.62 coord: 34..50 score: 30.56 coord: 11..32 score: 47.13 coord: 173..195 score: 40.38
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 12..198 e-value: 1.2E-13 score: 61.3
None	No IPR available	SMART	SM00174	rho_sub_3	coord: 13..198 e-value: 2.7E-8 score: -12.3
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 16..223 e-value: 6.4E-4 score: 7.3
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 11..198 e-value: 1.6E-63 score: 227.0
None	No IPR available	GENE3D	G3DSA:3.40.50.300		coord: 1..203 e-value: 1.8E-57 score: 195.6
None	No IPR available	PANTHER	PTHR24073	FAMILY NOT NAMED	coord: 3..222
None	No IPR available	PANTHER	PTHR24073:SF622	SUBFAMILY NOT NAMED	coord: 3..222
None	No IPR available	PROSITE	PS51419	RAB	coord: 6..222 score: 28.715
None	No IPR available	CDD	cd01860	Rab5_related	coord: 10..196 e-value: 5.33315E-106 score: 304.474
IPR001806	Small GTPase superfamily	PFAM	PF00071	Ras	coord: 12..195 e-value: 8.0E-49 score: 165.2
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 11..191 e-value: 5.5E-21 score: 73.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	SSF52540	P-loop containing nucleoside triphosphate hydrolases	coord: 7..204

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21440	Cla009191	Watermelon (97103) v1	carwmB0395
Carg21440	Csa1G705090	Cucumber (Chinese Long) v2	carcuB0427
Carg21440	MELO3C021803	Melon (DHL92) v3.5.1	carmeB0399
Carg21440	ClCG01G009100	Watermelon (Charleston Gray)	carwcgB0390
Carg21440	CSPI01G34600	Wild cucumber (PI 183967)	carcpiB0431
Carg21440	CmaCh13G004410	Cucurbita maxima (Rimu)	carcmaB0551
Carg21440	CmaCh18G005430	Cucurbita maxima (Rimu)	carcmaB0552
Carg21440	CmoCh13G004750	Cucurbita moschata (Rifu)	carcmoB0536
Carg21440	CmoCh18G005210	Cucurbita moschata (Rifu)	carcmoB0537
Carg21440	Lsi02G010220	Bottle gourd (USVL1VR-Ls)	carlsiB362
Carg21440	Cp4.1LG20g06010	Cucurbita pepo (Zucchini)	carcpeB0553
Carg21440	Cp4.1LG09g06930	Cucurbita pepo (Zucchini)	carcpeB0551
Carg21440	CsGy1G033060	Cucumber (Gy14) v2	carcgybB0403
Carg21440	MELO3C021803.2	Melon (DHL92) v3.6.1	carmedB0403
Carg21440	CsaV3_1G046470	Cucumber (Chinese Long) v3	carcucB0429
Carg21440	Cla97C01G009380	Watermelon (97103) v2	carwmbB0421
Carg21440	Bhi08G000769	Wax gourd	carwgoB0484

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21440	Carg25410	Silver-seed gourd	carcarB420

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21440	Melon (DHL92) v3.5.1	carmeB0400
Carg21440	Melon (DHL92) v3.6.1	carmedB0404
Carg21440	Cucumber (Gy14) v2	carcgybB0406
Carg21440	Cucumber (Gy14) v1	carcgyB0464
Carg21440	Cucumber (Gy14) v1	carcgyB0465
Carg21440	Cucurbita maxima (Rimu)	carcmaB0553
Carg21440	Wild cucumber (PI 183967)	carcpiB0433
Carg21440	Cucumber (Chinese Long) v2	carcuB0429
Carg21440	Cucumber (Chinese Long) v3	carcucB0431