Carg21429 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21429
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	CASP-like protein
Location	Cucurbita_argyrosperma_scaffold_103 : 286091 .. 289240 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAAAAAAAGAAAAAAAAAAAGTCTCATACGAACATACGTATATACTCATGACCACAATCTCGTCATTTCTTAACAAATGTGAGACTTAAGTCGCATTACAACAAGAAACTCCATCTCAAACTCGTCGTAGATCGAACCATTAAATTTTAGTTCCAACAAACCGAGCTTTGAAAGGAGAGGAGAGGAAAAAGGTGATGGGTTAGGTGTAATGTGGTAAGGAAATAGGCCAGGTAGATACAATGGTTGTACTAAGCAGACCACCAAAAAGCATCACATTAGGAATAAACAAGGCAGTAGCAGTCATACCATCCAAAGAAATAACTCGTTTACTTCTCAAACTCAACAAAGTTCAGCTAAATCTGAGTGGTTATAAGTACCTCATCCGAGTAAGAAACAGATCCAAGACGCTGAATTTGGTTGTTTGTCCATTATCCATGGCTTCTTTACAGTCCGAAGCAGCAGCAGCAGCAGCAAAAGCAGAGGTTGGTGAGTACAACCATCTTGCAGTGGCATCGCCGCCGACGAGGAAGTGGCGATGGGGGCTTGTTTTGGTCAGATTGGTGGCTTCTTTTGCCACAGCCTCAGCAACCCTTGTGATGGCTCTTAATAAGGAGTCCAAATCTGTTGTTGTTGCCACCGTTGGAACTGCTCCACTTACTGCCACTATATCTGCGAGGTTTCAGCACACTCCTGCGTTTATGTAAGCTTCTTAAATTGTGCCTCTGTTTTGTTTTTCTTCTATGATTTTTGTGGTTTTACCCCTTTTTAACCCTTTCTAGACTTAATAACCAAATCATGTCGTGTGTGACCAGACTCTATACAGTAAAAGTAGAATCGTGAAGCTATCAGTAAAACAAATCCAATAAAGCAACAACTAGTACCATAAAAAGTCGTCAAATTGCTAAAGTAGCTAAAGTAATGATAAAATCCATTAGCAAAATGGGTTCCATGATAAAACCCAACTATCGTTTTCCTATTTCTAGTAAAAATTCAAAAAATGATCCATTTATAATCGTTCGAGAATTGAATTAATGGATCTTTTAATTCGAACTGCCAATAAAATACATGAAGCTTAGAAAAAAACTTGCAGCTCAACAAACTTACTAACCCCTCTCACCTATTTTCTATTCACTTTTGTGACTCTTGCTTCTATCATGATTATTGCTGTTTTTTAGATGATGAATGTGGTAAAGTTTTGAACATAATAATTTAATTCTTGTGTCTTTTTTTGAAATAATTCAGGAACTAAGATTTAATTTGGGATAATTTAATTCTTATAATCTAAAATTCATAACAGTATAGTTCATATTTGTTCATATTGTGAAAATTTCATTTTAAGGTAAAGTATTTGATCTTTCATGAATAACCATTTATTATTAGTACTAAATACATTTAGTTTCAATCTTAACAAGATTCTACACAGCATGAACTAAATCATTAGACACTTTTTTGCAAATTAAAAAACTATTATTTTTAGTAGTAATTAATAGTCTAATTTTATCCAATTTTTCAAAAGGCTAAAGGTATAAATCCCACCAAATTAAGAAAATAATATAAATGAGTTAAATTAATAAAAATATATTTAAACTTTTGTAGGAGTAAAAAAAAAAAATCTAAAAAAATATATATATATCTATAAACTTTTAAAAAAAATTTAAAAAAATTTAAAACTATGTTTAATGTTTTGCTTTAAAAAGTTTAAAAAATACCATTAATTTTTTAAATATTTCAATACTCTAAATCTGGTTAAAAACTTATCATAAATAATCTAAGAATAGATAGATATAATCTAAGAGATTTCAATAGACAGTTTTTATCAAATAATCTTAAGAGATGTCTATAGGCAGTTTTTATCGGATAATCTTAAGAGATGTTTTTGGACAGTTTTTATCCGCTAATCTTAAGAGATATTTATAGACCATTTTTATCCGATTATCTTAAGAGATGTTGATCCACCGTTTTATAGACAGTTTTTATCAGATAATCTAAGAGATGTTTATAGACGGTTTTCATCGATAATAATTTTTTTAAATTTTTTTTTTTATAAAAATAAGAGAGGTTAATGCTTTTAAAATTTTATGGTATTTTTTAAAGTTTTTATAAAAAAAAAATGGAGGGTAGACTATTTTAAAATAAAATAGTAGCTATTTTCATTTAAAAAGAACCATTAAAAATATTTTTATTTTAGATTTTAAAAAAAAAAAAAATAAGAGTATTATTAAAAAATTTAAAAGTTCAGATATATTTTTTTAGATAATTATAAAATTTAATGGTATTGTTATTAATTTAGCCCTTTTCACTAAAACACATCTCCATAATAATACCTTTGAACTAATAAAAGCTTATGAAATTTAATGAATAGACTAAATTTGCTATTTAACTAATATTTAATTAACTATAAATACGATTTAGCAAAAATCAATATTAATTCTATGAGGAAAATAATAATAAAAGTAATTTATATACATAAAATGAGAGTGTACGTACTTGTTGCAGATTCTTCGTCGTAGCAAATGGAGTGGCCACTCTACACAACTGGTTGATGATAGCCCTAGACATCTTCGGACCCGATTACCGCTTCCATGGCTTCCGTCTTCCCATTGTCGCCATTCTAGACATGGTAAATACATCTTCATGCCTAATCCCCATCCTAATTTCAAAATTCCTTTATCTACAACACCAATAACGTTTTAACTCACCGATCTATCAAAATGGCGGCAGACGACGGTGGCTCTTGCATCGGCAGGCGACGGCGCAGCGACTTTCATGGCGGCGCTTGGAAAGAACGGAAATAAGCACGCTAGATGGAACAAGATCTGCGACAAATTCTCCGCCTACTGCGACCATGGCGCCGGTGCGCTCATCGCCTCCTTCGTTGGCCTCTGTCTTCTTCTTCTCATCAGCTCCATCTCCATTATCAAGCTGCTACACAAACCGAGACCTTCCATCGCTTCGCCATAGCCGATCTGCTTCTAAACGCAGCGTTTCGCTGCATTCGCCCTTCCGTCGCCATCTCCATTACTATTGTTGAATGTTGCGTTTGGTTGGTTTAATTTCATGTCTTTCAGTCGGAACTCCCGTGTGCCAAAAAATATCAAGTTGTTGGGCCGTGGTTTATTTATTGGGCTTTTGTGTTTCCAGGCCCAAT

mRNA sequence

AAAAAAAAAAGAAAAAAAAAAAGTCTCATACGAACATACGTATATACTCATGACCACAATCTCGTCATTTCTTAACAAATGTGAGACTTAAGTCGCATTACAACAAGAAACTCCATCTCAAACTCGTCGTAGATCGAACCATTAAATTTTAGTTCCAACAAACCGAGCTTTGAAAGGAGAGGAGAGGAAAAAGGTGATGGGTTAGGTGTAATGTGGTAAGGAAATAGGCCAGGTAGATACAATGGTTGTACTAAGCAGACCACCAAAAAGCATCACATTAGGAATAAACAAGGCAGTAGCAGTCATACCATCCAAAGAAATAACTCGTTTACTTCTCAAACTCAACAAAGTTCAGCTAAATCTGAGTGGTTATAAGTACCTCATCCGAGTAAGAAACAGATCCAAGACGCTGAATTTGGTTGTTTGTCCATTATCCATGGCTTCTTTACAGTCCGAAGCAGCAGCAGCAGCAGCAAAAGCAGAGGTTGGTGAGTACAACCATCTTGCAGTGGCATCGCCGCCGACGAGGAAGTGGCGATGGGGGCTTGTTTTGGTCAGATTGGTGGCTTCTTTTGCCACAGCCTCAGCAACCCTTGTGATGGCTCTTAATAAGGAGTCCAAATCTGTTGTTGTTGCCACCGTTGGAACTGCTCCACTTACTGCCACTATATCTGCGAGGTTTCAGCACACTCCTGCGTTTATATTCTTCGTCGTAGCAAATGGAGTGGCCACTCTACACAACTGGTTGATGATAGCCCTAGACATCTTCGGACCCGATTACCGCTTCCATGGCTTCCGTCTTCCCATTGTCGCCATTCTAGACATGACGACGGTGGCTCTTGCATCGGCAGGCGACGGCGCAGCGACTTTCATGGCGGCGCTTGGAAAGAACGGAAATAAGCACGCTAGATGGAACAAGATCTGCGACAAATTCTCCGCCTACTGCGACCATGGCGCCGGTGCGCTCATCGCCTCCTTCGTTGGCCTCTGTCTTCTTCTTCTCATCAGCTCCATCTCCATTATCAAGCTGCTACACAAACCGAGACCTTCCATCGCTTCGCCATAGCCGATCTGCTTCTAAACGCAGCGTTTCGCTGCATTCGCCCTTCCGTCGCCATCTCCATTACTATTGTTGAATGTTGCGTTTGGTTGGTTTAATTTCATGTCTTTCAGTCGGAACTCCCGTGTGCCAAAAAATATCAAGTTGTTGGGCCGTGGTTTATTTATTGGGCTTTTGTGTTTCCAGGCCCAAT

Coding sequence (CDS)

ATGGTTGTACTAAGCAGACCACCAAAAAGCATCACATTAGGAATAAACAAGGCAGTAGCAGTCATACCATCCAAAGAAATAACTCGTTTACTTCTCAAACTCAACAAAGTTCAGCTAAATCTGAGTGGTTATAAGTACCTCATCCGAGTAAGAAACAGATCCAAGACGCTGAATTTGGTTGTTTGTCCATTATCCATGGCTTCTTTACAGTCCGAAGCAGCAGCAGCAGCAGCAAAAGCAGAGGTTGGTGAGTACAACCATCTTGCAGTGGCATCGCCGCCGACGAGGAAGTGGCGATGGGGGCTTGTTTTGGTCAGATTGGTGGCTTCTTTTGCCACAGCCTCAGCAACCCTTGTGATGGCTCTTAATAAGGAGTCCAAATCTGTTGTTGTTGCCACCGTTGGAACTGCTCCACTTACTGCCACTATATCTGCGAGGTTTCAGCACACTCCTGCGTTTATATTCTTCGTCGTAGCAAATGGAGTGGCCACTCTACACAACTGGTTGATGATAGCCCTAGACATCTTCGGACCCGATTACCGCTTCCATGGCTTCCGTCTTCCCATTGTCGCCATTCTAGACATGACGACGGTGGCTCTTGCATCGGCAGGCGACGGCGCAGCGACTTTCATGGCGGCGCTTGGAAAGAACGGAAATAAGCACGCTAGATGGAACAAGATCTGCGACAAATTCTCCGCCTACTGCGACCATGGCGCCGGTGCGCTCATCGCCTCCTTCGTTGGCCTCTGTCTTCTTCTTCTCATCAGCTCCATCTCCATTATCAAGCTGCTACACAAACCGAGACCTTCCATCGCTTCGCCATAG

Protein sequence

MVVLSRPPKSITLGINKAVAVIPSKEITRLLLKLNKVQLNLSGYKYLIRVRNRSKTLNLVVCPLSMASLQSEAAAAAAKAEVGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPRPSIASP

Homology

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BLAST of Carg21429 vs. NCBI nr
Match: XP_022927401.1 (CASP-like protein 1B2 [Cucurbita moschata])

HSP 1 Score: 376.7 bits (966), Expect = 6.7e-101
Identity = 192/193 (99.48%), Postives = 193/193 (100.00%), Query Frame = 0


Query: 82  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 141
           VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA
Sbjct: 18  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 77

Query: 142 TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALA 201
           TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPI+AILDMTTVALA
Sbjct: 78  TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIIAILDMTTVALA 137

Query: 202 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 261
           SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII
Sbjct: 138 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 197

Query: 262 KLLHKPRPSIASP 275
           KLLHKPRPSIASP
Sbjct: 198 KLLHKPRPSIASP 210

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BLAST of Carg21429 vs. NCBI nr
Match: XP_023519194.1 (CASP-like protein 1B2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 370.5 bits (950), Expect = 4.8e-99
Identity = 188/193 (97.41%), Postives = 190/193 (98.45%), Query Frame = 0


Query: 82  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 141
           VGEYNHLAVASPPTRKWRWG VLVRLVASFAT SATLVMALNKESKSVVVATVGTAPLTA
Sbjct: 14  VGEYNHLAVASPPTRKWRWGFVLVRLVASFATVSATLVMALNKESKSVVVATVGTAPLTA 73

Query: 142 TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALA 201
           TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLP +AILDMTTVALA
Sbjct: 74  TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPTIAILDMTTVALA 133

Query: 202 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 261
           SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLIS+ISII
Sbjct: 134 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISAISII 193

Query: 262 KLLHKPRPSIASP 275
           KLLHKPRPSIASP
Sbjct: 194 KLLHKPRPSIASP 206

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BLAST of Carg21429 vs. NCBI nr
Match: XP_023001374.1 (CASP-like protein 1B2 [Cucurbita maxima])

HSP 1 Score: 369.0 bits (946), Expect = 1.4e-98
Identity = 187/193 (96.89%), Postives = 191/193 (98.96%), Query Frame = 0


Query: 82  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 141
           VGEYNHLAVASPP RKWRWGLVLVRLVASFAT SATLVMALNKESKSVVVATVGTAPLTA
Sbjct: 18  VGEYNHLAVASPPPRKWRWGLVLVRLVASFATVSATLVMALNKESKSVVVATVGTAPLTA 77

Query: 142 TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALA 201
           TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPD+RFHGFRLPI+AILDMTTVALA
Sbjct: 78  TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDFRFHGFRLPIIAILDMTTVALA 137

Query: 202 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 261
           SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLI++ISII
Sbjct: 138 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLINAISII 197

Query: 262 KLLHKPRPSIASP 275
           KLLHKPRPSIASP
Sbjct: 198 KLLHKPRPSIASP 210

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BLAST of Carg21429 vs. NCBI nr
Match: XP_022142567.1 (CASP-like protein 1B2 [Momordica charantia])

HSP 1 Score: 308.9 bits (790), Expect = 1.7e-80
Identity = 160/197 (81.22%), Postives = 173/197 (87.82%), Query Frame = 0


Query: 83  GEYN----HLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAP 142
           GEYN     +A A    R  RWGLV VRLVASFATASATLVMALNKE+KSVVVAT+GTAP
Sbjct: 13  GEYNVHVHDVAAARAKARNSRWGLVAVRLVASFATASATLVMALNKETKSVVVATIGTAP 72

Query: 143 LTATISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTV 202
           LTAT++ARF HTPAF+FFV+ANG+ATLHNW+MIALDIFGP+  FHGFRLPI+AILDM TV
Sbjct: 73  LTATVAARFHHTPAFVFFVIANGMATLHNWIMIALDIFGPNLHFHGFRLPIIAILDMATV 132

Query: 203 ALASAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSI 262
           ALASAGDGAATFMAALGKNGNKHARWNKICDKFS YCDHGAGALIASFVGLCLLLLI  I
Sbjct: 133 ALASAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIASFVGLCLLLLIDVI 192

Query: 263 SIIKLL-HKPRPSIASP 275
           SI+K+L HKP  S ASP
Sbjct: 193 SIVKVLKHKPNNSFASP 209

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BLAST of Carg21429 vs. NCBI nr
Match: XP_008459066.1 (PREDICTED: CASP-like protein 1B2 [Cucumis melo] >XP_008459067.1 PREDICTED: CASP-like protein 1B2 [Cucumis melo])

HSP 1 Score: 307.8 bits (787), Expect = 3.8e-80
Identity = 158/193 (81.87%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 82  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 141
           VGEYNHLA+     +K  WG +L+RLVASFATASATLVMALNKE+KS+VVAT+GT PLTA
Sbjct: 19  VGEYNHLAM----EKKRNWGFILLRLVASFATASATLVMALNKETKSIVVATIGTDPLTA 78

Query: 142 TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALA 201
           T+SA F HTPAFIFFVVANG+ATLHNW+MIAL IFGP + F+GFRLPI++ILDMTTVALA
Sbjct: 79  TLSAHFYHTPAFIFFVVANGMATLHNWMMIALHIFGPKFHFNGFRLPIISILDMTTVALA 138

Query: 202 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 261
           SAGDGAATFMAALGKNGNKHARWNKICDKFS YCDHGAGALIASFVGLCLLLLIS+ISII
Sbjct: 139 SAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIASFVGLCLLLLISAISII 198

Query: 262 KLLHKPRPSIASP 275
           K LHK   S ASP
Sbjct: 199 KPLHKSNNSFASP 207

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BLAST of Carg21429 vs. TAIR10
Match: AT4G20390.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 194.1 bits (492), Expect = 1.1e-49
Identity = 96/177 (54.24%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 88  LAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARF 147
           + VA   T+ W+  L+ +R+ A  AT +A +VM+LNKE+K++VVAT+GT P+ AT++A+F
Sbjct: 6   IVVAGGTTKSWKL-LLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKF 65

Query: 148 QHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGA 207
           QHTPAF+FFV+AN + + HN LMI + IF     + G RL  +AILDM    L SA   A
Sbjct: 66  QHTPAFVFFVIANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANA 125

Query: 208 ATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL 265
           A F+A LGKNGNKHA+WNK+CD+F+ YCDHGAGA+IA+F G+ L+LL+S++SI +LL
Sbjct: 126 AVFVAELGKNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRLL 181

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BLAST of Carg21429 vs. TAIR10
Match: AT5G44550.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 190.7 bits (483), Expect = 1.2e-48
Identity = 103/175 (58.86%), Postives = 129/175 (73.71%), Query Frame = 0


Query: 102 LVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANG 161
           L+ +RL+A  AT SA +VM LNKE+K+ +V  VG  P+ AT +A+F HTPAF+FFVVAN 
Sbjct: 19  LLGLRLLAFSATLSAAIVMGLNKETKTFIVGKVGNTPIQATFTAKFDHTPAFVFFVVANA 78

Query: 162 VATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNGNKH 221
           + + HN LMIAL IFG    F GFRL  VAILDM  V L SA   AA FMA +GKNGNKH
Sbjct: 79  MVSFHNLLMIALQIFGGKMEFTGFRLLSVAILDMLNVTLISAAANAAAFMAEVGKNGNKH 138

Query: 222 ARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL--HKPRPSIASP 275
           ARW+KICD+F+ YCDHGAGALIA+F G+ L+L+IS+ SI +L+  +K   + ASP
Sbjct: 139 ARWDKICDRFATYCDHGAGALIAAFAGVILMLIISAASISRLVQPNKCCSTTASP 193

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BLAST of Carg21429 vs. TAIR10
Match: AT4G15610.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 76.3 bits (186), Expect = 3.4e-14
Identity = 55/169 (32.54%), Postives = 93/169 (55.03%), Query Frame = 0


Query: 103 VLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANGV 162
           V++R V   AT ++ +VM  +K++K++ +   GT P+    +A F ++PA I+FVVA  V
Sbjct: 31  VVLRFVLFAATLTSIVVMVTSKQTKNIFLP--GT-PIRIP-AAEFTNSPALIYFVVALSV 90

Query: 163 ATLHNWLMIALDIFGPDYRFHGFRLPI---VAILDMTTVALASAGDGAATFMAALGKNGN 222
           A  ++  +++  +    ++ H     +   +AI+D   V + ++  GA   +A LG  GN
Sbjct: 91  ACFYS--IVSTFVTVSAFKKHSCSAVLLLNLAIMDAVMVGIVASATGAGGGVAYLGLKGN 150

Query: 223 KHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPR 269
           K  RW KIC  +  +C H  GA+  S     +LLL+S IS++ L  K R
Sbjct: 151 KEVRWGKICHIYDKFCRHVGGAIAVSLFASVVLLLLSIISVLSLYKKIR 193

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BLAST of Carg21429 vs. TAIR10
Match: AT4G03540.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 70.5 bits (171), Expect = 1.9e-12
Identity = 51/162 (31.48%), Postives = 85/162 (52.47%), Query Frame = 0


Query: 99  RWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVV 158
           R G +++RL A  A  +A +VM  ++E  S          L  ++ A++    AF +FV+
Sbjct: 7   RIGGLVLRLAAFGAALAALIVMITSRERASF---------LAISLEAKYTDMAAFKYFVI 66

Query: 159 ANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNG 218
           AN V +++++L++ L      ++F       V +LD+    L ++   AA  +A +GK G
Sbjct: 67  ANAVVSVYSFLVLFLPKESLLWKF-------VVVLDLVMTMLLTSSLSAALAVAQVGKKG 126

Query: 219 NKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISI 261
           N +A W  IC +   +CD   GALIA FV L L +L+   S+
Sbjct: 127 NANAGWLPICGQVPKFCDQITGALIAGFVALVLYVLLLLYSL 152

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BLAST of Carg21429 vs. TAIR10
Match: AT4G15620.1 (Uncharacterised protein family (UPF0497))

HSP 1 Score: 68.2 bits (165), Expect = 9.2e-12
Identity = 45/160 (28.12%), Postives = 83/160 (51.88%), Query Frame = 0


Query: 105 VRLVASFATASATLVMALNKESKSVVVATVGT-APLTATISARFQHTPAFIFFVVANGVA 164
           +R++A   T +A  V+ + K++K V +  + T  PL  T +A+  +  AF++ +  N +A
Sbjct: 31  MRVLALILTMAAATVLGVAKQTKVVSIKLIPTLPPLDITTTAKASYLSAFVYNISVNAIA 90

Query: 165 TLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNGNKHAR 224
             +  + IA+ +     R     L +V + D+  VAL  +G GAA+ +  +G +GNKH  
Sbjct: 91  CGYTAISIAILMISRGRRSKKL-LMVVLLGDLVMVALLFSGTGAASAIGLMGLHGNKHVM 150

Query: 225 WNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKL 264
           W K+C  F  +C   A +L  + +   + + +  +  IKL
Sbjct: 151 WKKVCGVFGKFCHRAAPSLPLTLLAAVVFMFLVVLDAIKL 189

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BLAST of Carg21429 vs. Swiss-Prot
Match: sp|B9GIE4|CSPL5_POPTR (CASP-like protein 1B2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_798217 PE=3 SV=3)

HSP 1 Score: 224.6 bits (571), Expect = 1.4e-57
Identity = 113/177 (63.84%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 93  PPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPA 152
           P TRK  W L+++R++A FATA+AT+VM LNKE+K++VVATVG+ P+ A+++A+FQHTPA
Sbjct: 18  PKTRK--WVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLAAKFQHTPA 77

Query: 153 FIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMA 212
           F+FFV+ANG+A++HN +MI  D+FG    + G RL ++AILDM TVAL S G  AA FMA
Sbjct: 78  FVFFVIANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDMMTVALVSGGVSAAAFMA 137

Query: 213 ALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPRP 270
            LGKNGN HARWNKICDKF  +CDHG GALIASF GL L+L+IS +SIIKLL KP+P
Sbjct: 138 ELGKNGNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKP 192

[Close]

BLAST of Carg21429 vs. Swiss-Prot
Match: sp|B9I0U9|CSPLB_POPTR (CASP-like protein 1B1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823125 PE=3 SV=1)

HSP 1 Score: 212.6 bits (540), Expect = 5.4e-54
Identity = 107/170 (62.94%), Postives = 136/170 (80.00%), Query Frame = 0


Query: 99  RWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVV 158
           +W L++VR+VA  ATA+ATLVMALNKE+K++VVATVG  P+  T++A+FQHTPAF+FFV+
Sbjct: 22  KWVLLMVRVVAFLATAAATLVMALNKETKTLVVATVGNTPIKVTLTAKFQHTPAFVFFVI 81

Query: 159 ANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNG 218
           ANG+A+ HN LMI +++ G    + G RL +VAILDM TVAL S G  AATFMA LGKNG
Sbjct: 82  ANGMASFHNLLMIMVELCGQKLDYKGMRLAMVAILDMMTVALVSGGASAATFMAELGKNG 141

Query: 219 NKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPR 269
           N HARW+KICDKF  +CDHG  ALIAS  GL L+++IS +SI+KLL KP+
Sbjct: 142 NSHARWDKICDKFETFCDHGGAALIASSAGLILMMIISVMSIMKLLIKPK 191

[Close]

BLAST of Carg21429 vs. Swiss-Prot
Match: sp|C6TG62|CSPL9_SOYBN (CASP-like protein 1B1 OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.6e-53
Identity = 107/176 (60.80%), Postives = 140/176 (79.55%), Query Frame = 0


Query: 89  AVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQ 148
           AV  P  +K  W ++ +R+VA FATASATLVMA NK++K +VVAT+GT P+T T++A FQ
Sbjct: 15  AVPDPKPKK-DWVILSLRVVAFFATASATLVMAFNKQTKGMVVATIGTNPVTITLTAMFQ 74

Query: 149 HTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAA 208
           HTPAFIFFV+ N +A+ +N L+I ++I GP Y + G RL ++AILD+ T+ALA+ GDGAA
Sbjct: 75  HTPAFIFFVIVNAIASFYNLLVIGVEILGPQYDYKGLRLGLIAILDVMTMALAATGDGAA 134

Query: 209 TFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL 265
           TFMA LG+NGN HARW+KICDKF AYC+ G  AL+ASFVGL LLL+++ +SI KLL
Sbjct: 135 TFMAELGRNGNSHARWDKICDKFEAYCNRGGVALVASFVGLILLLVVTVMSITKLL 189

[Close]

BLAST of Carg21429 vs. Swiss-Prot
Match: sp|Q9SUP0|CSPLQ_ARATH (CASP-like protein 1B2 OS=Arabidopsis thaliana OX=3702 GN=At4g20390 PE=2 SV=1)

HSP 1 Score: 194.1 bits (492), Expect = 2.0e-48
Identity = 96/177 (54.24%), Postives = 133/177 (75.14%), Query Frame = 0


Query: 88  LAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARF 147
           + VA   T+ W+  L+ +R+ A  AT +A +VM+LNKE+K++VVAT+GT P+ AT++A+F
Sbjct: 6   IVVAGGTTKSWKL-LLGLRIFAFMATLAAAIVMSLNKETKTLVVATIGTVPIKATLTAKF 65

Query: 148 QHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGA 207
           QHTPAF+FFV+AN + + HN LMI + IF     + G RL  +AILDM    L SA   A
Sbjct: 66  QHTPAFVFFVIANVMVSFHNLLMIVVQIFSRKLEYKGLRLLSIAILDMLNATLVSAAANA 125

Query: 208 ATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL 265
           A F+A LGKNGNKHA+WNK+CD+F+ YCDHGAGA+IA+F G+ L+LL+S++SI +LL
Sbjct: 126 AVFVAELGKNGNKHAKWNKVCDRFTTYCDHGAGAIIAAFAGVILMLLVSAVSISRLL 181

[Close]

BLAST of Carg21429 vs. Swiss-Prot
Match: sp|D7MFJ8|CSPLC_ARALL (CASP-like protein 1B2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT_492822 PE=3 SV=1)

HSP 1 Score: 192.6 bits (488), Expect = 5.8e-48
Identity = 98/177 (55.37%), Postives = 132/177 (74.58%), Query Frame = 0


Query: 88  LAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARF 147
           + VA   T+ W+  L+ +R+ A  AT +A +VM+LNKE+K++VVAT+GT P+ AT++A+F
Sbjct: 6   IVVAGGSTKSWKL-LLGLRVFAFMATLAAAIVMSLNKETKTLVVATIGTLPIKATLTAKF 65

Query: 148 QHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGA 207
           Q TPAF+FFV+AN + + HN LMI L IF     + G RL  +AILDM    L SA   A
Sbjct: 66  QDTPAFVFFVIANVMVSFHNLLMIVLQIFSRKLEYKGVRLLSIAILDMLNATLVSAAANA 125

Query: 208 ATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL 265
           A F+A LGKNGNKHA+WNK+CD+F+ YCDHGAGALIA+F G+ L+LL+SS+SI +LL
Sbjct: 126 AVFVAELGKNGNKHAKWNKVCDRFATYCDHGAGALIAAFAGVILMLLVSSVSISRLL 181

[Close]

BLAST of Carg21429 vs. TrEMBL
Match: tr|A0A1S3C9C0|A0A1S3C9C0_CUCME (CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498288 PE=3 SV=1)

HSP 1 Score: 307.8 bits (787), Expect = 2.5e-80
Identity = 158/193 (81.87%), Postives = 173/193 (89.64%), Query Frame = 0


Query: 82  VGEYNHLAVASPPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTA 141
           VGEYNHLA+     +K  WG +L+RLVASFATASATLVMALNKE+KS+VVAT+GT PLTA
Sbjct: 19  VGEYNHLAM----EKKRNWGFILLRLVASFATASATLVMALNKETKSIVVATIGTDPLTA 78

Query: 142 TISARFQHTPAFIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALA 201
           T+SA F HTPAFIFFVVANG+ATLHNW+MIAL IFGP + F+GFRLPI++ILDMTTVALA
Sbjct: 79  TLSAHFYHTPAFIFFVVANGMATLHNWMMIALHIFGPKFHFNGFRLPIISILDMTTVALA 138

Query: 202 SAGDGAATFMAALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISII 261
           SAGDGAATFMAALGKNGNKHARWNKICDKFS YCDHGAGALIASFVGLCLLLLIS+ISII
Sbjct: 139 SAGDGAATFMAALGKNGNKHARWNKICDKFSTYCDHGAGALIASFVGLCLLLLISAISII 198

Query: 262 KLLHKPRPSIASP 275
           K LHK   S ASP
Sbjct: 199 KPLHKSNNSFASP 207

[Close]

BLAST of Carg21429 vs. TrEMBL
Match: tr|A0A059DCI5|A0A059DCI5_EUCGR (CASP-like protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A00513 PE=3 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 5.6e-56
Identity = 112/173 (64.74%), Postives = 149/173 (86.13%), Query Frame = 0


Query: 102 LVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVVANG 161
           L+++RLVA FATA+AT+VMALNKE+K++VVAT+G+ P+ AT++A+FQ TPAF+FFV+ANG
Sbjct: 27  LLVLRLVAFFATAAATIVMALNKETKTIVVATIGSTPINATLTAKFQDTPAFVFFVIANG 86

Query: 162 VATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNGNKH 221
           +A+LHN LM+ ++I+G  + + G RL ++A+LDM TVALAS GDGAATFMA LGK GN H
Sbjct: 87  MASLHNLLMVVVEIWGHKFDYKGLRLAMIAVLDMMTVALASGGDGAATFMAELGKKGNSH 146

Query: 222 ARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPRPSIASP 275
           ARWNKICDKF  +CDHGAGA+I+SFVGL LL+LI+++SI +L+ KPRP+  SP
Sbjct: 147 ARWNKICDKFGTFCDHGAGAIISSFVGLLLLVLITALSIGRLV-KPRPATLSP 198

[Close]

BLAST of Carg21429 vs. TrEMBL
Match: tr|A0A072TGS8|A0A072TGS8_MEDTR (CASP-like protein OS=Medicago truncatula OX=3880 GN=25480267 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.6e-56
Identity = 117/180 (65.00%), Postives = 144/180 (80.00%), Query Frame = 0


Query: 96  RKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIF 155
           +K  W L+ +R+VA FATA+ATLVMALNK++KS V+ TVG  PLTAT+SA+F  TPAF+F
Sbjct: 22  KKNDWILLSLRVVAFFATAAATLVMALNKQTKSFVIGTVGNTPLTATLSAKFNQTPAFVF 81

Query: 156 FVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALG 215
           FV+ANG A+LHN +MIALDI GP Y + G RL ++AILDM T+ALASAGDGAATFM+ALG
Sbjct: 82  FVIANGNASLHNLVMIALDILGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSALG 141

Query: 216 KNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL------HKPRP 270
           +NGN HARW+KICDKF +YC+ G GALIASF+G  LLL+I+ +SI KLL      H P P
Sbjct: 142 RNGNSHARWDKICDKFESYCNRGGGALIASFIGFILLLIITVMSISKLLKPNRINHAPSP 201

[Close]

BLAST of Carg21429 vs. TrEMBL
Match: tr|A0A2K3PNU3|A0A2K3PNU3_TRIPR (CASP-like protein OS=Trifolium pratense OX=57577 GN=L195_g013699 PE=3 SV=1)

HSP 1 Score: 226.1 bits (575), Expect = 9.6e-56
Identity = 114/177 (64.41%), Postives = 143/177 (80.79%), Query Frame = 0


Query: 100 WGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPAFIFFVVA 159
           W L+ +R+VA FATA+AT VMALNK++KS++V T+G+ P+TAT+SA+F  TPAF+FFV+A
Sbjct: 26  WILLSLRVVAFFATAAATFVMALNKQTKSLIVGTIGSTPITATLSAKFNQTPAFVFFVIA 85

Query: 160 NGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMAALGKNGN 219
           NG A+LHN +MIALDI GP Y + G RL ++AILDM T+ALASAGDGAATFM+ LG+NGN
Sbjct: 86  NGNASLHNLVMIALDILGPQYDYKGLRLALIAILDMLTMALASAGDGAATFMSELGRNGN 145

Query: 220 KHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLL------HKPRPS 271
            HARWNKICDKF +YC+ G GALIASF+G  LLL+I+ +SI KLL      H P PS
Sbjct: 146 SHARWNKICDKFESYCNRGGGALIASFIGFILLLIIAVMSIAKLLKPNRINHAPSPS 202

[Close]

BLAST of Carg21429 vs. TrEMBL
Match: tr|A0A2K2CD38|A0A2K2CD38_POPTR (CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G442300v3 PE=3 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.8e-55
Identity = 113/177 (63.84%), Postives = 144/177 (81.36%), Query Frame = 0


Query: 93  PPTRKWRWGLVLVRLVASFATASATLVMALNKESKSVVVATVGTAPLTATISARFQHTPA 152
           P TRK  W L+++R++A FATA+AT+VM LNKE+K++VVATVG+ P+ A+++A+FQHTPA
Sbjct: 18  PKTRK--WVLLMLRVLAFFATAAATVVMGLNKETKTLVVATVGSTPIKASLAAKFQHTPA 77

Query: 153 FIFFVVANGVATLHNWLMIALDIFGPDYRFHGFRLPIVAILDMTTVALASAGDGAATFMA 212
           F+FFV+ANG+A++HN +MI  D+FG    + G RL ++AILDM TVAL S G  AA FMA
Sbjct: 78  FVFFVIANGLASIHNLVMIMGDLFGQKLDYKGLRLAMIAILDMMTVALVSGGVSAAAFMA 137

Query: 213 ALGKNGNKHARWNKICDKFSAYCDHGAGALIASFVGLCLLLLISSISIIKLLHKPRP 270
            LGKNGN HARWNKICDKF  +CDHG GALIASF GL L+L+IS +SIIKLL KP+P
Sbjct: 138 ELGKNGNSHARWNKICDKFETFCDHGGGALIASFAGLILMLIISVMSIIKLLIKPKP 192

The following BLAST results are available for this feature:

BLAST of Carg21429 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022927401.1	6.7e-101	99.48	CASP-like protein 1B2 [Cucurbita moschata]	[more]
XP_023519194.1	4.8e-99	97.41	CASP-like protein 1B2 [Cucurbita pepo subsp. pepo]	[more]
XP_023001374.1	1.4e-98	96.89	CASP-like protein 1B2 [Cucurbita maxima]	[more]
XP_022142567.1	1.7e-80	81.22	CASP-like protein 1B2 [Momordica charantia]	[more]
XP_008459066.1	3.8e-80	81.87	PREDICTED: CASP-like protein 1B2 [Cucumis melo] >XP_008459067.1 PREDICTED: CASP-...	[more]

BLAST of Carg21429 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G20390.1	1.1e-49	54.24	Uncharacterised protein family (UPF0497)	[more]
AT5G44550.1	1.2e-48	58.86	Uncharacterised protein family (UPF0497)	[more]
AT4G15610.1	3.4e-14	32.54	Uncharacterised protein family (UPF0497)	[more]
AT4G03540.1	1.9e-12	31.48	Uncharacterised protein family (UPF0497)	[more]
AT4G15620.1	9.2e-12	28.13	Uncharacterised protein family (UPF0497)	[more]

BLAST of Carg21429 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|B9GIE4\|CSPL5_POPTR	1.4e-57	63.84	CASP-like protein 1B2 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_798217 PE=3 S...	[more]
sp\|B9I0U9\|CSPLB_POPTR	5.4e-54	62.94	CASP-like protein 1B1 OS=Populus trichocarpa OX=3694 GN=POPTRDRAFT_823125 PE=3 S...	[more]
sp\|C6TG62\|CSPL9_SOYBN	1.6e-53	60.80	CASP-like protein 1B1 OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|Q9SUP0\|CSPLQ_ARATH	2.0e-48	54.24	CASP-like protein 1B2 OS=Arabidopsis thaliana OX=3702 GN=At4g20390 PE=2 SV=1	[more]
sp\|D7MFJ8\|CSPLC_ARALL	5.8e-48	55.37	CASP-like protein 1B2 OS=Arabidopsis lyrata subsp. lyrata OX=81972 GN=ARALYDRAFT...	[more]

BLAST of Carg21429 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3C9C0\|A0A1S3C9C0_CUCME	2.5e-80	81.87	CASP-like protein OS=Cucumis melo OX=3656 GN=LOC103498288 PE=3 SV=1	[more]
tr\|A0A059DCI5\|A0A059DCI5_EUCGR	5.6e-56	64.74	CASP-like protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_A00513 PE=3 SV=1	[more]
tr\|A0A072TGS8\|A0A072TGS8_MEDTR	9.6e-56	65.00	CASP-like protein OS=Medicago truncatula OX=3880 GN=25480267 PE=3 SV=1	[more]
tr\|A0A2K3PNU3\|A0A2K3PNU3_TRIPR	9.6e-56	64.41	CASP-like protein OS=Trifolium pratense OX=57577 GN=L195_g013699 PE=3 SV=1	[more]
tr\|A0A2K2CD38\|A0A2K2CD38_POPTR	2.8e-55	63.84	CASP-like protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G442300v3 PE=3 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006459	CASP/CASPL
IPR006702	CASP_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21429-RA	Carg21429-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006702	Casparian strip membrane protein domain	PFAM	PF04535	DUF588	coord: 96..250 e-value: 2.0E-32 score: 112.0
IPR006459	Casparian strip membrane protein	TIGRFAM	TIGR01569	TIGR01569	coord: 104..262 e-value: 1.5E-44 score: 149.5
None	No IPR available	PANTHER	PTHR11615	NITRATE, FROMATE, IRON DEHYDROGENASE	coord: 90..266
None	No IPR available	PANTHER	PTHR11615:SF120	CASP-LIKE PROTEIN 1B1-RELATED	coord: 90..266

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21429	Cla009174	Watermelon (97103) v1	carwmB0395
Carg21429	Csa1G716260	Cucumber (Chinese Long) v2	carcuB0429
Carg21429	MELO3C021781	Melon (DHL92) v3.5.1	carmeB0399
Carg21429	ClCG01G008950	Watermelon (Charleston Gray)	carwcgB0390
Carg21429	CSPI01G34890	Wild cucumber (PI 183967)	carcpiB0433
Carg21429	Cucsa.236680	Cucumber (Gy14) v1	carcgyB0465
Carg21429	CmaCh13G004530	Cucurbita maxima (Rimu)	carcmaB0551
Carg21429	CmoCh13G004880	Cucurbita moschata (Rifu)	carcmoB0536
Carg21429	Lsi02G010080	Bottle gourd (USVL1VR-Ls)	carlsiB362
Carg21429	Cp4.1LG20g06000	Cucurbita pepo (Zucchini)	carcpeB0553
Carg21429	MELO3C021781.2	Melon (DHL92) v3.6.1	carmedB0403
Carg21429	CsaV3_1G046760	Cucumber (Chinese Long) v3	carcucB0431
Carg21429	Cla97C01G009190	Watermelon (97103) v2	carwmbB0421
Carg21429	Bhi08G000787	Wax gourd	carwgoB0484

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21429	Cucurbita pepo (Zucchini)	carcpeB0551
Carg21429	Silver-seed gourd	carcarB420
Carg21429	Cucurbita maxima (Rimu)	carcmaB0552
Carg21429	Cucurbita maxima (Rimu)	carcmaB0553
Carg21429	Cucurbita moschata (Rifu)	carcmoB0537
Carg21429	Melon (DHL92) v3.5.1	carmeB0400
Carg21429	Melon (DHL92) v3.6.1	carmedB0404