Carg21188 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg21188
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	L-arabinokinase
Location	Cucurbita_argyrosperma_scaffold_207 : 472685 .. 476787 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAGTCAACTAGAGGCGGAGGCGGTTTCAGCGTCGAGGAATAGTTAGGTCGTTGCTTACTACATCACCGGCCATGGCTTAGGCTGCGCCACTCGCGTTATTGAGGTCAGTTCCTCCATTACAGAATGTTGATTTCATTTCTGTTGTTTGATTGTGTTTTTTCCGCTGGATATATGCAACAGAGTTTGGATTTTCGTTTCTAATGAGCTTGAATTCTTCGGTTCTCGGAATTGTTGTTTAGAAATTCTGTAAGGATAGTTCTCGCGTTGAATTTCTTTAGTTTTGGAATGTCGATAGATTTATTCGGTGCTGGATCACATTCTAATCTCTTTCTCGAAATATCGATTTGTTTTGATGTGTGTTTTTTTTCCTGTTATGTAACTTCACGAGATCTTTCTGAAACTTCTTAGGTTTCAATTGAATTTGTTATATGCAATGGAGTTTCTTTCTCTAGTTCTGGAATGCCATGAGATTTCTTCGCCGCTTGATCACATTCTCCTCTTTCTCAAAATATAGATATATTTTGATGCGTGTTTTGTTTCCTGTAATGTAACTTCACGAAGTCTCTCTGAAACTTTTTCGTTTCGGTTGAATGTGTTCTATGCAATGGAGTTTTCGATTTCATTCTGTTCTGAGTTTGGATTCTTCAGTTCTTGAATTTGATATCAAGAAATTCTACGAGGTCAGTCTCGCGTCGAATTTCTCTAGTTTTGGAATGTCGTGAGATTTCTTCGGTGCTTTGTCACATTTTCTTCTCTCGCTCAGAATGTCAATTTTTTTTGTTCTGCATTCCTGCTATGCAACTTATTCTGCTATCAGTCTTCTGGAGTCGAAGATCACAAAAATCTTACTGAAATTTCTTCGGTTTTGATTGAATGTGTTCCACTTCTTTTATGCAATGGAGTTTGGATTTCGTTCTGTTACGAGCTTGAATTCTTCCGTTCTCAGATTTGTTGTTTAAAACTTCTGTAAGGCAGTTCTCCTGACGAGTTTCATTAATTTTAGAATTTTGAGAGATTTCTTCTGTGCTTGATCACATTTCCTTCTCTCGCTCGAAGTTTTGGTTATATTGATCTGCATTTCCTGCAATGTTACTTATCCTGCTGAAATTTCTTCTGGTTTGTCTTCGTGGAACTATAGTTCAACTCTTAAGTTTTATGCATTGCTTTACGACATTTTTTATCTTCTTCTTCTTCTTCCCTTGAGAATGCTTGATGATGCAATACATTGTTCTGTGCATAAAGGTTGTTCGACATTTTTTATCTTCTTCTTCTTCCCTTGAGAATGCTTGATAATGCAATACATTGTTCTGCGCATAAAGGTTGTTCGACATTTTTTATCTTCTTCTTCTTCCCTTGAGAATGCTTGATAATGCAATACATTGTTCTGTGCATCAGTTCGACATTTTTTATCTTCTTCTTCTTCCCTTGAGAATGCATGATAATGCAATACATTGTTCTGTGCATAAAAGTTGTTCGACATCTTATACTTGCAGGCCACGAGGTGCACGTGGCCTCCTTTGCCCCTCAGTTTGTTTTTACTTCTGCAATGCTGTCGCCTGGGTTGTTCATTCGAAAGGTAAGTTTGGTCAAGGCTCACGCCTGACTTCTAGTGATTGCCGCTAAGTTAAGCTGTTCATCAGGCCTATTCGTCTCATTGCAAATTTTAGTTTCAATATCTTTCCAATAATTTATCAGTTAAGAGAATTTAATGGATTTTGCTAGTGGATATGATGCAGAAGTTCAATTTTGATTTGTCTTTAGATATTGTAACTCTTACTTTCTATGTGCGCTTCATGGTTCATATTAATATTATTGATTACTGTATTATGTTTTTATGCATCGAGCACCTCCTCTAATTAAGGCTCACATTAATAAAAATATTCATAACTTTGCTAATGTATTTTCTTATTCACTCTTTTATGAATAGTTTTTTAATCTTTATTTTCATGTTTTTGTTAATACATTTATTCTTCTTTTCTTCTCATATGTGTGTATGTATATATATATATATTGTAAATGCTAAACGAACTTGGACAAACAAATGGTGAGTGTACTTTGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGGTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACACCTCCCCTCGAACAAAGTGCGCCTCCCCTTAATCGAGGCTCGACTCCTTTGGAGTCTTAGTCATTTTTGACTGCCTTCGAGGAGGGGCTTGGCTCCTTTTCTTTAGGAGTTCTTTGTTCGATATTTGAGGATTTGAGGATTTACCAATCTATTGGCACGACTAAGTTTAGGGCATGGCTCTGATACCATGTTAGACGAACACGACTCTCCACAATGGTATGATATTGTCCACTTTGAGCATAAGCTCTCATGGCTTTGCTTTGGGCTTCCCCAAAAGGCCTCATACCAATGGAGGTAGTATTCCTCACTTATAAACCCATGATCATTCCCTAAATTAGTCGATGTGGGACTTCCATCATCCAACATACTTGACCAATTTAGATATATAAACCAAAATTTTATAGTTTTATTTAATATAACTTGTTTTTCATGAACTCGTAGAATTTGACATTAAGTTCTTGATTTTTTAGTTTCTTTCCGCATTCCAAATGAGGCTTCAGTTGAACTCCAATCACATTCACGTGGAACATCGTGCAATAATTAGTTGCAAATAAACCTTCGTGTATCTGTTGGATTTATATATTCTTTAATCAATTATAGGAATTGTTGGACTGTGGGGCTGTCCAGACAGATGCAATAACAGTGGATCGCTTGGCATCCTTGGAGTAGGTGAGAAGTTTCTGGCATCCACGATAGTTTTTCCCAATACGAAATACAGAATTTACAAAGTATGACATGTTGTCATCGACCTTTACTAATAATCTACCAGCGTACTACAATTACTATGTTCTTTCCTTATCAGATCGCTTGGGATTTCATCTATGCACAGTATGCCATGGATGCTGGTCATCACCACCGTTCGATAGTTTGGCAGGTGCTTTTTTTTTTTAAACAATATTTTAATCAGTATTTGAGTATCCTTAAATGGTTCACTCTTTCCTAGGACAGAAACTAAATTTGATGGCACCTAGAAATAACTGCATATAATCTCCTTCACCATAATGTTGATTATTATTATCGTCACTATTAGACAATTTTGTATTGAAGAGACTTTTTGCACGTCTAAAACCAAAAAATTTAAATGTGAAAATTGACAGTCTCGTTGAAGTCCGTCCTTCATTTTATGTGTTAGTGTAATTGTATTCTATGATGCTATGAACTCTTAATTGTTCTTGGCATAGACATTGACCTGTTGTGCTGCTTTAAAAGCAGCATTGCAGAAGATTATTCACATTGCGAGTTCCAATCCGCCTCCCAGGATACTGCCCAATTATATTTTCTTGACAGTTATTTTTTACCTTTTTCTGCTACCGTCTTTTTTTGTTGCATTTTTTTTTTTTTTTTTTTTTTTTTAACATTTGTTCTATATTCATTATTTTCTCTTGTTTTTGATAATTTGCCTGCATACGTCTTGCTTCTGCAGTGCCTGCTTTCCATTTGTGATTTTCTTAAGCTAGGTGTGGAACAAACTGGGTATTGGAGATAATGTCAAGTTATCTCCAACACCGTTATGAAGTGGCCGAGCTTATCCAGATGGATATAAACACGTTCACAAATCTTCCATCTTTTTCAGGAAAAGTTGGTTACGGAACCGTTATGAAGCATTGGCATACAGAGTATCCTTTGTTTTTGTCCGAAAGAGATTATTTTAACGAAGAACCATATTTAAGGAATATGCTTGAGGTGCTATAATCTACTTTGTCTTCAATGATACACTCCTGCATCAGTAATTCGAAAAGTTAGCTTATAGGAACCGATTAAATAAGAAATTTGAAAGTTGTTATGATGCAGTGCCATTACTGTTACAGTGCGTGTGGCGGAACAGCTTGTCCATGCGCCGGAGAAATCCAGGTGCTGGAGGGTAG

mRNA sequence

ATGTGGAGTCAACTAGAGGCGGAGGCGGTTTCAGCGTCGAGGAATAGCCACGAGGTGCACGTGGCCTCCTTTGCCCCTCAGTTTGTTTTTACTTCTGCAATGCTGTCGCCTGGGTTGTTCATTCGAAAGGAATTGTTGGACTGTGGGGCTGTCCAGACAGATGCAATAACAATCGCTTGGGATTTCATCTATGCACAGTATGCCATGGATGCTGGTCATCACCACCGTTCGATAGTTTGGCAGTGCGTGTGGCGGAACAGCTTGTCCATGCGCCGGAGAAATCCAGGTGCTGGAGGGTAG

Coding sequence (CDS)

ATGTGGAGTCAACTAGAGGCGGAGGCGGTTTCAGCGTCGAGGAATAGCCACGAGGTGCACGTGGCCTCCTTTGCCCCTCAGTTTGTTTTTACTTCTGCAATGCTGTCGCCTGGGTTGTTCATTCGAAAGGAATTGTTGGACTGTGGGGCTGTCCAGACAGATGCAATAACAATCGCTTGGGATTTCATCTATGCACAGTATGCCATGGATGCTGGTCATCACCACCGTTCGATAGTTTGGCAGTGCGTGTGGCGGAACAGCTTGTCCATGCGCCGGAGAAATCCAGGTGCTGGAGGGTAG

Protein sequence

MWSQLEAEAVSASRNSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITIAWDFIYAQYAMDAGHHHRSIVWQCVWRNSLSMRRRNPGAGG

Homology

[Close]

BLAST of Carg21188 vs. NCBI nr
Match: XP_008466276.1 (PREDICTED: L-arabinokinase-like isoform X1 [Cucumis melo])

HSP 1 Score: 91.3 bits (225), Expect = 2.0e-15
Identity = 53/126 (42.06%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                  
Sbjct: 42  HEVHVVSAAPEFVFTSAIQSPRLFIRKVLLDCGAVQTDALTVDRLASLEKYHETAVVHRH 101

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 102 TILETEAEWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYIMDAGHHH 161

[Close]

BLAST of Carg21188 vs. NCBI nr
Match: XP_022936884.1 (L-arabinokinase-like [Cucurbita moschata])

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15
Identity = 52/126 (41.27%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 40  HEVHVVSAAPEFVFTSAIQSPRLFIRKVLLDCGAVQADALTVDRLASLKKYHETAVVPRF 99

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 100 TILETEVKWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMDAGHHH 159

[Close]

BLAST of Carg21188 vs. NCBI nr
Match: XP_022976245.1 (L-arabinokinase-like [Cucurbita maxima])

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15
Identity = 52/126 (41.27%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 40  HEVHVVSAAPEFVFTSAIQSPRLFIRKVLLDCGAVQADALTVDRLASLKKYHETAVVPRC 99

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 100 TILETEVKWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMDAGHHH 159

[Close]

BLAST of Carg21188 vs. NCBI nr
Match: XP_023536088.1 (L-arabinokinase-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 89.7 bits (221), Expect = 5.9e-15
Identity = 52/126 (41.27%), Postives = 58/126 (46.03%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 40  HEVHVVSAAPEFVFTSAIQSPRLFIRKVLLDCGAVQADALTVDRLASLKKYHETAVVPRF 99

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 100 TILETEVKWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMDAGHHH 159

[Close]

BLAST of Carg21188 vs. NCBI nr
Match: XP_004136439.1 (PREDICTED: L-arabinokinase-like isoform X1 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 3.8e-14
Identity = 51/126 (40.48%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP L IRK LLDCGAVQ DA+T+                  
Sbjct: 42  HEVHVVSAAPEFVFTSAIQSPRLIIRKVLLDCGAVQADALTVDRLASLEKYHETAVVHRH 101

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 102 TILETEAEWLKSIKADLVVSDVVPVACRAAANAGIRSVCVTNFSWDFIYAEYIMDAGHHH 161

[Close]

BLAST of Carg21188 vs. TAIR10
Match: AT3G42850.1 (Mevalonate/galactokinase family protein)

HSP 1 Score: 79.0 bits (193), Expect = 1.9e-15
Identity = 46/128 (35.94%), Postives = 55/128 (42.97%), Query Frame = 0


Query: 15  NSHEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI---------------- 74
           + H VHV S AP+FVFT  + SP LFIRK LLDCG+VQ DA+++                
Sbjct: 41  SGHRVHVVSAAPEFVFTMEIHSPNLFIRKVLLDCGSVQADALSVDRRASLEKYCEIAVEP 100

Query: 75  ---------------------------------------------AWDFIYAQYAMDAGH 82
                                                        +WDFIYA+Y M AGH
Sbjct: 101 RDSILATEAEWLKSIKANLVVSDVVPIACRAAANAGIRSVCVTNFSWDFIYAEYVMAAGH 160

[Close]

BLAST of Carg21188 vs. TAIR10
Match: AT4G16130.1 (arabinose kinase)

HSP 1 Score: 75.5 bits (184), Expect = 2.1e-14
Identity = 46/126 (36.51%), Postives = 54/126 (42.86%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           H+VHV + AP FVFTS + SP L IRK LLDCGAVQ DA+T+                  
Sbjct: 95  HDVHVVTGAPDFVFTSEIQSPRLKIRKVLLDCGAVQADALTVDRLASLEKYVETAVVPRA 154

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y M AG+HH
Sbjct: 155 EILETEVEWLHSIKADFVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGYHH 214

[Close]

BLAST of Carg21188 vs. Swiss-Prot
Match: sp|O23461|ARAK_ARATH (L-arabinokinase OS=Arabidopsis thaliana OX=3702 GN=ARA1 PE=1 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 3.7e-13
Identity = 46/126 (36.51%), Postives = 54/126 (42.86%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           H+VHV + AP FVFTS + SP L IRK LLDCGAVQ DA+T+                  
Sbjct: 95  HDVHVVTGAPDFVFTSEIQSPRLKIRKVLLDCGAVQADALTVDRLASLEKYVETAVVPRA 154

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y M AG+HH
Sbjct: 155 EILETEVEWLHSIKADFVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGYHH 214

[Close]

BLAST of Carg21188 vs. TrEMBL
Match: tr|A0A1S3CQV5|A0A1S3CQV5_CUCME (L-arabinokinase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503733 PE=4 SV=1)

HSP 1 Score: 91.3 bits (225), Expect = 1.3e-15
Identity = 53/126 (42.06%), Postives = 59/126 (46.83%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP LFIRK LLDCGAVQTDA+T+                  
Sbjct: 42  HEVHVVSAAPEFVFTSAIQSPRLFIRKVLLDCGAVQTDALTVDRLASLEKYHETAVVHRH 101

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 102 TILETEAEWLKSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYIMDAGHHH 161

[Close]

BLAST of Carg21188 vs. TrEMBL
Match: tr|A0A0A0LGT8|A0A0A0LGT8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G883000 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 2.5e-14
Identity = 51/126 (40.48%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           HEVHV S AP+FVFTSA+ SP L IRK LLDCGAVQ DA+T+                  
Sbjct: 42  HEVHVVSAAPEFVFTSAIQSPRLIIRKVLLDCGAVQADALTVDRLASLEKYHETAVVHRH 101

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y MDAGHHH
Sbjct: 102 TILETEAEWLKSIKADLVVSDVVPVACRAAANAGIRSVCVTNFSWDFIYAEYIMDAGHHH 161

[Close]

BLAST of Carg21188 vs. TrEMBL
Match: tr|A0A1S3C2J4|A0A1S3C2J4_CUCME (L-arabinokinase OS=Cucumis melo OX=3656 GN=LOC103495738 PE=4 SV=1)

HSP 1 Score: 85.1 bits (209), Expect = 9.6e-14
Identity = 50/126 (39.68%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           H+VHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 47  HDVHVVSGAPEFVFTSAIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYHETAVVPRA 106

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y M AGHHH
Sbjct: 107 TILATEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 166

[Close]

BLAST of Carg21188 vs. TrEMBL
Match: tr|A0A0A0KZ62|A0A0A0KZ62_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G098720 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 4.8e-13
Identity = 49/126 (38.89%), Postives = 57/126 (45.24%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           H+VHV S AP+FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 47  HDVHVVSGAPEFVFTSAIQSPRLFIRKVLLDCGAVQADALTVDRLASLEKYHETAVVPRA 106

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y M AGH+H
Sbjct: 107 SILATEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHYH 166

[Close]

BLAST of Carg21188 vs. TrEMBL
Match: tr|A0A2G5CS39|A0A2G5CS39_AQUCA (Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03900193v1 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 8.1e-13
Identity = 49/126 (38.89%), Postives = 56/126 (44.44%), Query Frame = 0


Query: 17  HEVHVASFAPQFVFTSAMLSPGLFIRKELLDCGAVQTDAITI------------------ 76
           H+VHV + AP FVFTSA+ SP LFIRK LLDCGAVQ DA+T+                  
Sbjct: 45  HDVHVVTGAPAFVFTSAIDSPRLFIRKVLLDCGAVQADALTVDRLASLKMYSETAVIPRD 104

Query: 77  -------------------------------------------AWDFIYAQYAMDAGHHH 82
                                                      +WDFIYA+Y M AGHHH
Sbjct: 105 SILATEVEWLNSIKADLVVSDVVPVACRAAADAGIRSVCVTNFSWDFIYAEYVMAAGHHH 164

The following BLAST results are available for this feature:

BLAST of Carg21188 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_008466276.1	2.0e-15	42.06	PREDICTED: L-arabinokinase-like isoform X1 [Cucumis melo]	[more]
XP_022936884.1	5.9e-15	41.27	L-arabinokinase-like [Cucurbita moschata]	[more]
XP_022976245.1	5.9e-15	41.27	L-arabinokinase-like [Cucurbita maxima]	[more]
XP_023536088.1	5.9e-15	41.27	L-arabinokinase-like [Cucurbita pepo subsp. pepo]	[more]
XP_004136439.1	3.8e-14	40.48	PREDICTED: L-arabinokinase-like isoform X1 [Cucumis sativus]	[more]

BLAST of Carg21188 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G42850.1	1.9e-15	35.94	Mevalonate/galactokinase family protein	[more]
AT4G16130.1	2.1e-14	36.51	arabinose kinase	[more]

BLAST of Carg21188 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O23461\|ARAK_ARATH	3.7e-13	36.51	L-arabinokinase OS=Arabidopsis thaliana OX=3702 GN=ARA1 PE=1 SV=1	[more]

BLAST of Carg21188 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CQV5\|A0A1S3CQV5_CUCME	1.3e-15	42.06	L-arabinokinase-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503733 PE=4 SV=...	[more]
tr\|A0A0A0LGT8\|A0A0A0LGT8_CUCSA	2.5e-14	40.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G883000 PE=4 SV=1	[more]
tr\|A0A1S3C2J4\|A0A1S3C2J4_CUCME	9.6e-14	39.68	L-arabinokinase OS=Cucumis melo OX=3656 GN=LOC103495738 PE=4 SV=1	[more]
tr\|A0A0A0KZ62\|A0A0A0KZ62_CUCSA	4.8e-13	38.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G098720 PE=4 SV=1	[more]
tr\|A0A2G5CS39\|A0A2G5CS39_AQUCA	8.1e-13	38.89	Uncharacterized protein OS=Aquilegia coerulea OX=218851 GN=AQUCO_03900193v1 PE=4...	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg21188-RA	Carg21188-RA	mRNA

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg21188	Cla009985	Watermelon (97103) v1	carwmB0550
Carg21188	Csa3G883000	Cucumber (Chinese Long) v2	carcuB0582
Carg21188	MELO3C003601	Melon (DHL92) v3.5.1	carmeB0558
Carg21188	ClCG05G026320	Watermelon (Charleston Gray)	carwcgB0537
Carg21188	CSPI03G44850	Wild cucumber (PI 183967)	carcpiB0588
Carg21188	Cucsa.311220	Cucumber (Gy14) v1	carcgyB0630
Carg21188	CmoCh09G005310	Cucurbita moschata (Rifu)	carcmoB0746
Carg21188	Lsi04G022110	Bottle gourd (USVL1VR-Ls)	carlsiB499
Carg21188	Cp4.1LG06g04460	Cucurbita pepo (Zucchini)	carcpeB0782
Carg21188	CsGy3G042340	Cucumber (Gy14) v2	carcgybB0558
Carg21188	MELO3C003601.2	Melon (DHL92) v3.6.1	carmedB0564
Carg21188	CsaV3_3G047280	Cucumber (Chinese Long) v3	carcucB0589
Carg21188	Cla97C05G108560	Watermelon (97103) v2	carwmbB0578
Carg21188	Bhi09G002032	Wax gourd	carwgoB0662

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg21188	Carg02952	Silver-seed gourd	carcarB511

The following block(s) are covering this gene:


Gene	Organism	Block
Carg21188	Silver-seed gourd	carcarB513
Carg21188	Cucumber (Gy14) v2	carcgybB0557
Carg21188	Cucumber (Gy14) v1	carcgyB0628
Carg21188	Cucurbita maxima (Rimu)	carcmaB0767
Carg21188	Cucurbita maxima (Rimu)	carcmaB0770
Carg21188	Cucurbita maxima (Rimu)	carcmaB0771
Carg21188	Cucurbita moschata (Rifu)	carcmoB0748
Carg21188	Cucurbita moschata (Rifu)	carcmoB0749
Carg21188	Cucurbita pepo (Zucchini)	carcpeB0780
Carg21188	Cucurbita pepo (Zucchini)	carcpeB0784
Carg21188	Wild cucumber (PI 183967)	carcpiB0587
Carg21188	Cucumber (Chinese Long) v2	carcuB0581
Carg21188	Cucumber (Chinese Long) v3	carcucB0588
Carg21188	Bottle gourd (USVL1VR-Ls)	carlsiB502
Carg21188	Melon (DHL92) v3.5.1	carmeB0556
Carg21188	Melon (DHL92) v3.6.1	carmedB0562
Carg21188	Watermelon (Charleston Gray)	carwcgB0539
Carg21188	Watermelon (97103) v1	carwmB0547
Carg21188	Watermelon (97103) v2	carwmbB0580
Carg21188	Wax gourd	carwgoB0661