Carg21011 (gene) Silver-seed gourd

Overview
NameCarg21011
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionATP-dependent RNA helicase
LocationCucurbita_argyrosperma_scaffold_170 : 326922 .. 332639 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTTATCCGCCATGGGATTACGATAATTGGTGGATTTTTGGTCATGTATAAATTGTAGGCTTCGTTAGTGAACTTGAGCGAAACCCTTTTGTAGCCGATTATTGTCCTTTCTATCTTCTTGGTAGTTTTCGTTAGATTTCTTATTTGTTTTTGTCGTCATTCAATCAATCGATCGGAAACCCTAGCTCCCGTTTTTTTTATAACGTCGTTAGGGTCTCGAGTCTTGATCATTGTGTCTAGTGATGAACAATAGGGGAAGGTATCCACCTGGGATCGGCGCTGGACGGGGCGGAGGCGTGAATGCGAACCCTTCGTTTCAGTCAAGACCACACCAGCAGCAATACGTACAAAGAAATTTGGTGCCGAATCAGCAGTATCAACAACAGCACCATCAGAACCAGCACCAACACCAGCAGCTTCAACAACACCAACAATGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCCGATTCCAACGTTGACGAGGTTGAGAAGACCGTGCAGTCTGAGGCTGTTGATTCGAGGTTTGTGTTAAATACGCGAAGGAGTTGGTGTTTATTTTTATGCATTATATTGTATGGGCGTTTACATAAAATGATTGGATTAATTTCTCTGTATGCTCATACCGGAGGTTGATTTATGATTTTGTAATGGGGTTGCAATTGGATGCTTGGTTTTCTGTCGAAGGGGGCACATGGTTAACTTATTAATTATGGTTGATCCCATTCGCTAAAAGCATCGGGTATGGTAGAAAAATTTGGGTCTCTGCTCCTTGTTTATCTTTCTTTCTGACCCGCCACTTGTGTTGTTTTGCGCATATTTCATGTGACTGAGGATGTTGAGCATACAGATGATCTTATGTTAAGAAACTTTTGTATCTCATCAAAATTCTATTGCCAAGAGGATAGGTTTTGAATTTTGGTAAGTTGTATTGCCTGCCATGCGTAGAAACTGATTATTATCATTTATGCCTTTTCTCTTCCGTGCAGTTCACAAGATTGGAAGGCAAGGCTAAAGATTCCACCACCCGATACACGCTATAGAACAGAGGTATGGTTCTAATGATCTTCTTAAGGCTTTACAACCAGTTTATAAAATATTAATCGCTGCATGCTGATTTATCCCTATGCACAGGCTTGGCAGATAAGTGCTATTATAATATTCTCATTCTTTAGTCAGTTTTCTGTGAATCTCATTCAAATTTGAAATACTCACGGTCTCTGTATAAGACATGCCTAACTTTGTTAGCATCTGGTCGTTTCATTTTCAGGATGTGACAGCTACGAAAGGAAATGAATTCGAGGACTATTTTTTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCAATTGCTTTAACCGGTAGTGATATTCTTGCTAGAGCAAAAAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTGGAAAAGATTGATCAGGATAACAATGTAATCCAAGGTTTGTTTTTTTACCAGTCATTATCAATCTTATATTATTTTTATGAGCAGGTCGATTCTCTAAATTCCAAATCGATGAGATTCCTTCATATTCAATTTCTAATTAGCTCCATTGCCATCCAAACATTCTCAATGTGCTGTAGTTTAATCCAAGTTTTTTCAACAGGCTAGAAATTATACACAACAAAATTCTTGCTGTGTTGTTTCCTTTGACCAGTACATTAATTCTTCCCACTAAATCGGTGCTCGTGTTGAATATCATACTTGAGGTCTTCTGGTGAAAACAATATCTTCTTAATGTGTAAAAAGAAATAAATGTCACTTTCAAGTTGTAAATTCATCAGATAGATTCTATTCTTTCCCAGAATAATAATACCCTTCCACAAGACAAGACTAGCCTCTTGAGTTCTTTGCATCAACCTACTTAGTATTTCCACCCTCACGGCATCTTTGCCTATGGCTTGCCCCACTTTCCTACTGTTATTTTTTCTGACCCAATAATTTATTCCACGACTTTAATTTTAACATGTGTCATATCATTCTTCTACTAAGGCGCTGGGAACGTGTGATTTTCTTTTTATTCATGTTCTCTAAATGCTGCTATGCCATGTTTCTATGGCAATATTGATTCCTATATCATTTTGTTTGGTTCACTCATTTGACATTTGTTTTTCCTTTTTATATGAACAGTTGTTATCCTTGTTCCAACACGAGAGTTGGCTCTTCAGACTTCACAAGTTTGTAAGGAACTCGGGAAGAATTTGAATATTCAAGTTATGGTTACGACAGGTGGTACCAGCTTAAAGGATGATATCATGCGATTATATCAACCAGTTCATTTATTAGTTGGAACTCCTGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGACTGTTCTATGCTTATTATGGATGAGGTAATCACCTGAGATATGAACGACATTATATTCAGTTTCTGGTTATCATAAATTAGTTGCTTTATTGTCAATATCATTTTTGTTTCCGTAGGAATTTGTCCTATAATATTACAGTAGTGGGGTCATGTAATCTAAATGATTTTATGACTATAGATTGATAATTGAACAATGATATTTACGGCAGATATCAATTGCTTTTCCATCCTTATGTACTTGAGAATGATATTGAAAAGGAAGTCATACAACTTAGCAGGATATGTAAACACATTTTATATTTTCAATCGTGAGTTATTGCTTGTAGTACTGATATACCTGGACGACTTTCACTTTTGTTTGTGATTATTCTCTCCCTGCCTTTGTCACCCTCCCATCCGTATGCTTAAGCATTATCCTGTATGTTATACGTGTTGCATAGTAGTGTGAACTGTCTAATTTTATGTTGTTTCCTTACCAAGTTCCCATTTTCCCCAAAGAGGTAGTGCATGGGTTCCTATTACTGAAAGAAAGACTTCAAATTCTGGGGTAAATTTAAATCTTTGGGTTAGTTCTAGCAGTTATGGTTACCACATTCAGAAAAGTATACCGGTTGCTTTAATTTATCTTAACTCATTAATTTAGGTTTTTAGTTTGAGGAGTAAGTTAACATGATAAAAAATAATGAAAACCATTTCAAACTTCTATGATTGTACGTATCCTATTTTATATTTAACCATTTTCTTGGGTCACATGCTCTTGGGTTTAGTATCGATTAATAATATAGTATTGGGAGGTACTGTGTTGTTAACTCATTGCGAAAAGCTAACCTTTTGTTGTTCTGTTTCTCAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCTTCAATAGAGCATTTGATTCGCTTTTTGCCTTCAAATCGGCAGATTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAAGCCCTATATTATAAACTTAATGGATGAGCTCACTTTGAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTTCACTGCCTTAATACTCTTTTCTCTAAGGTTTGATTCCGAGGAAGCTAATTCTTTTTCTTGGTTTTCTTCCCTAGATTCTCTTTTCCTTTGTAAATCACAAAGTTAATGTTTCTATCTGCAGCTGCAAATTAACCAGTCGATTATCTTCTGCAATTCCGTAAATCGAGTCGAGTTGTTAGCCAAGAAAATAACGGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAATAGAGTATTTCATGACTTCCGAAATGGTGCATGTAGAAATCTTGTTTGTACTGGTATGTTATTTCTCGGTGCATAATTATTCATGCGTACATAAGCTTGATAAGGATGCCTCTATCTATCTATTTGTTTATTTGTTGAAAGTTAAACCATCCTTTCTTTACTGCATCTTGTTTACTCTACATATTTCTTCTCCCTTCTTGAATAAGCATGTCTTTTACCCAGTATGTCAAAAGAAAATCCGTGAAACTATCCCACTTTTCCTGAACTAATTTCTTATAATGTGGGATGCAATTGCAGATTTATTTACAAGAGGAATTGACATTCAAGCAGTAAATGTTGTTATTAACTTTGATTTTCCCAAGAATTCTGAGACATATCTGCACAGGGTATGTGTCACATTCAGTTCCTGTCGAATCTTTCGATTTACCTCTCAAACATTTAAAAATGTTTTCATTTGCAGGTTGGAAGATCTGGAAGGTTTGGACATCTTGGATTAGCTGTGAATTTAATCACTTATGAGGATCGTTTCAATTTGTATGTATTCTAAAAGATGTTTTATTTGATGACTGCCATCGTCATATATTCAAATGCACTGAAATGTGATTTTCTGTATAACAGGTACAGGATTGAGCAAGAACTTGGAACTGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCAGTAATTTGTGGTGGGCACTGGATCCTAGGTAAACGATTGGCAGGTAAGAACCGTACCGTGCTACCAAATTCCCCTTCATTATATGTACACACACAGACACATAGGCATGTACATATATATTTAACAAATGGTAGGAGTACCCGTAAGGTATTGATGTTAGAAAAACTGAGTTGTTTCATTATACAAGAATCCAAAAAGGAATTCCTACATCTGGGGATGGCAGGCATTGAAAAGTTCGAAACATAATTAGATTGTACCAATCTAATTAAGCACCTTTAGTTAGTTAACGCCTAAATATAGTTTTCTGGTATATCTGGATTGCTACAACTGTGCGTAAATCATTTGCATCAACAAATATTGATGGATTTTTCATTTTTGTTTCCTTAAGGTGAATGAAGCTCCTTGAAAGAGCGGTATCTGGCTACGATGGAGGCGTGTTTTCTGAGTCAATATGAGAGAAGACTCAGCTTGTGCAGAGTGTTGGGTTGGAATTTTCTATTAGTTAGAAAGCTATAGGCGTGAAGACATTTAACAGGAGATTAGGATAGAATGTAGACTGGTGGGTGATCTATAAAAATCCCAGAGGCGGTTGAATTCTGGGTCCCCAGTTATTTGGCTTATCTTTATCAGCTGACCTGTTTGTTTCTGCTCTCTCTGTGTTTGTTTTCTCCTCGTTTGCTCTCATCAACATCTCATCTCTTCCCTTCCAACTTTCTGCCATGTATTGTAATCTCTCCGTTTTTTCTCCCTTGAAAAAACTCTCATCCTCCCCTGCCCTTCCTCTTTTTATGCACTTTCTAGACTCCTAAATTTAGAACTTTTGCTTTCTCCCCGACCCCTCGGTTGTTTCGAATACTTGGAAGTTCAATGGACAGTTGCTTTTGTACCCTTCCTCGGCCACACTTTCGTACTTGGTAATTGTTCTTTTTTCTTCATTCGTGTTATTTAGCTTCAGTTCAAATGCGTTTAAATTAGGGTATGTCTGGAATGACTTCTCTCGAGTGTTTCCATCTGAAAAATAGGACCTCACAGAAGGTTGGTTTTGCTTGCATTTTGTAGCGTAATTTGTATGTGAAGGGACTTTGTGCAATTTTATTAAATGCGTTGTTGGAGCATTGCTTTTGCTTTAGGGTCGCCGCCGACAGATATGCGAGTAGAAAGCTGGAGGCTTTGTTTCACGCAACCTTACTATTAGACACACCATTCTGTGTGCCTAATTTATTGCTGAGGCCATCCGCTGTCTATGCTTTTTTTGGGTATCAGACGTATTTATGATCTTTCCTTTTTTTTTT

mRNA sequence

TTTATCCGCCATGGGATTACGATAATTGGTGGATTTTTGGTCATGTATAAATTGTAGGCTTCGTTAGTGAACTTGAGCGAAACCCTTTTGTAGCCGATTATTGTCCTTTCTATCTTCTTGGTAGTTTTCGTTAGATTTCTTATTTGTTTTTGTCGTCATTCAATCAATCGATCGGAAACCCTAGCTCCCGTTTTTTTTATAACGTCGTTAGGGTCTCGAGTCTTGATCATTGTGTCTAGTGATGAACAATAGGGGAAGGTATCCACCTGGGATCGGCGCTGGACGGGGCGGAGGCGTGAATGCGAACCCTTCGTTTCAGTCAAGACCACACCAGCAGCAATACGTACAAAGAAATTTGGTGCCGAATCAGCAGTATCAACAACAGCACCATCAGAACCAGCACCAACACCAGCAGCTTCAACAACACCAACAATGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCCGATTCCAACGTTGACGAGGTTGAGAAGACCGTGCAGTCTGAGGCTGTTGATTCGAGTTCACAAGATTGGAAGGCAAGGCTAAAGATTCCACCACCCGATACACGCTATAGAACAGAGGATGTGACAGCTACGAAAGGAAATGAATTCGAGGACTATTTTTTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCAATTGCTTTAACCGGTAGTGATATTCTTGCTAGAGCAAAAAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTGGAAAAGATTGATCAGGATAACAATGTAATCCAAGTTGTTATCCTTGTTCCAACACGAGAGTTGGCTCTTCAGACTTCACAAGTTTGTAAGGAACTCGGGAAGAATTTGAATATTCAAGTTATGGTTACGACAGGTGGTACCAGCTTAAAGGATGATATCATGCGATTATATCAACCAGTTCATTTATTAGTTGGAACTCCTGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGACTGTTCTATGCTTATTATGGATGAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCTTCAATAGAGCATTTGATTCGCTTTTTGCCTTCAAATCGGCAGATTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAAGCCCTATATTATAAACTTAATGGATGAGCTCACTTTGAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTTCACTGCCTTAATACTCTTTTCTCTAAGCTGCAAATTAACCAGTCGATTATCTTCTGCAATTCCGTAAATCGAGTCGAGTTGTTAGCCAAGAAAATAACGGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAATAGAGTATTTCATGACTTCCGAAATGGTGCATGTAGAAATCTTGTTTGTACTGATTTATTTACAAGAGGAATTGACATTCAAGCAGTAAATGTTGTTATTAACTTTGATTTTCCCAAGAATTCTGAGACATATCTGCACAGGGTTGGAAGATCTGGAAGGTTTGGACATCTTGGATTAGCTGTGAATTTAATCACTTATGAGGATCGTTTCAATTTGTACAGGATTGAGCAAGAACTTGGAACTGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCAGTAATTTGTGGTGGGCACTGGATCCTAGGTAAACGATTGGCAGGTGAATGAAGCTCCTTGAAAGAGCGGTATCTGGCTACGATGGAGGCGTGTTTTCTGAGTCAATATGAGAGAAGACTCAGCTTGTGCAGAGTGTTGGGTTGGAATTTTCTATTAGTTAGAAAGCTATAGGCGTGAAGACATTTAACAGGAGATTAGGATAGAATGTAGACTGGTGGGTGATCTATAAAAATCCCAGAGGCGGTTGAATTCTGGGTCCCCAGTTATTTGGCTTATCTTTATCAGCTGACCTGTTTGTTTCTGCTCTCTCTGTGTTTGTTTTCTCCTCGTTTGCTCTCATCAACATCTCATCTCTTCCCTTCCAACTTTCTGCCATGTATTGTAATCTCTCCGTTTTTTCTCCCTTGAAAAAACTCTCATCCTCCCCTGCCCTTCCTCTTTTTATGCACTTTCTAGACTCCTAAATTTAGAACTTTTGCTTTCTCCCCGACCCCTCGGTTGTTTCGAATACTTGGAAGTTCAATGGACAGTTGCTTTTGTACCCTTCCTCGGCCACACTTTCGTACTTGGTAATTGTTCTTTTTTCTTCATTCGTGTTATTTAGCTTCAGTTCAAATGCGTTTAAATTAGGGTATGTCTGGAATGACTTCTCTCGAGTGTTTCCATCTGAAAAATAGGACCTCACAGAAGGTTGGTTTTGCTTGCATTTTGTAGCGTAATTTGTATGTGAAGGGACTTTGTGCAATTTTATTAAATGCGTTGTTGGAGCATTGCTTTTGCTTTAGGGTCGCCGCCGACAGATATGCGAGTAGAAAGCTGGAGGCTTTGTTTCACGCAACCTTACTATTAGACACACCATTCTGTGTGCCTAATTTATTGCTGAGGCCATCCGCTGTCTATGCTTTTTTTGGGTATCAGACGTATTTATGATCTTTCCTTTTTTTTTT

Coding sequence (CDS)

ATGAACAATAGGGGAAGGTATCCACCTGGGATCGGCGCTGGACGGGGCGGAGGCGTGAATGCGAACCCTTCGTTTCAGTCAAGACCACACCAGCAGCAATACGTACAAAGAAATTTGGTGCCGAATCAGCAGTATCAACAACAGCACCATCAGAACCAGCACCAACACCAGCAGCTTCAACAACACCAACAATGGCTGAAAAGGAACCAGTTAGGTGGCGGTCCTGCCGATTCCAACGTTGACGAGGTTGAGAAGACCGTGCAGTCTGAGGCTGTTGATTCGAGTTCACAAGATTGGAAGGCAAGGCTAAAGATTCCACCACCCGATACACGCTATAGAACAGAGGATGTGACAGCTACGAAAGGAAATGAATTCGAGGACTATTTTTTAAAACGTGAATTACTCATGGGAATCTATGAGAAAGGCTTTGAAAGACCATCTCCTATTCAAGAAGAAAGTATTCCAATTGCTTTAACCGGTAGTGATATTCTTGCTAGAGCAAAAAACGGAACTGGAAAGACAGCTGCATTTTGCATTCCCGCCTTGGAAAAGATTGATCAGGATAACAATGTAATCCAAGTTGTTATCCTTGTTCCAACACGAGAGTTGGCTCTTCAGACTTCACAAGTTTGTAAGGAACTCGGGAAGAATTTGAATATTCAAGTTATGGTTACGACAGGTGGTACCAGCTTAAAGGATGATATCATGCGATTATATCAACCAGTTCATTTATTAGTTGGAACTCCTGGAAGAATATTAGATCTTGCAAAAAAGGGTGTTTGTGTACTGAAAGACTGTTCTATGCTTATTATGGATGAGGCTGACAAGCTCTTGTCTCCAGAGTTCCAACCTTCAATAGAGCATTTGATTCGCTTTTTGCCTTCAAATCGGCAGATTCTTATGTATTCCGCTACCTTTCCTGTTACTGTGAAGGACTTCAAAGATAGATATCTTCACAAGCCCTATATTATAAACTTAATGGATGAGCTCACTTTGAAGGGTATCACCCAATTCTATGCATTTGTTGAAGAAAGACAAAAAGTTCACTGCCTTAATACTCTTTTCTCTAAGCTGCAAATTAACCAGTCGATTATCTTCTGCAATTCCGTAAATCGAGTCGAGTTGTTAGCCAAGAAAATAACGGAACTTGGTTATTCTTGTTTCTATATTCATGCAAAGATGCTGCAAGATCATCGTAATAGAGTATTTCATGACTTCCGAAATGGTGCATGTAGAAATCTTGTTTGTACTGATTTATTTACAAGAGGAATTGACATTCAAGCAGTAAATGTTGTTATTAACTTTGATTTTCCCAAGAATTCTGAGACATATCTGCACAGGGTTGGAAGATCTGGAAGGTTTGGACATCTTGGATTAGCTGTGAATTTAATCACTTATGAGGATCGTTTCAATTTGTACAGGATTGAGCAAGAACTTGGAACTGAAATAAAACAAATACCACCCCATATTGACCAGGCAATCTACTGCCAGTAA

Protein sequence

MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQQYQQQHHQNQHQHQQLQQHQQWLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ
Homology
[Close]
BLAST of Carg21011 vs. NCBI nr
Match: XP_022924437.1 (DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata] >XP_022980274.1 DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita maxima] >XP_023526747.1 DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 948.3 bits (2450), Expect = 1.0e-272
Identity = 497/497 (100.00%), Postives = 497/497 (100.00%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYCQ
Sbjct: 481 TEIKQIPPHIDQAIYCQ 497

[Close]
BLAST of Carg21011 vs. NCBI nr
Match: XP_004133869.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus] >XP_011650758.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus])

HSP 1 Score: 939.9 bits (2428), Expect = 3.6e-270
Identity = 487/497 (97.99%), Postives = 491/497 (98.79%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN-----QXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPTNRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg21011 vs. NCBI nr
Match: XP_008438061.1 (PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo] >XP_008438062.1 PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo])

HSP 1 Score: 939.9 bits (2428), Expect = 3.6e-270
Identity = 487/497 (97.99%), Postives = 491/497 (98.79%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN-----QXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPANRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg21011 vs. NCBI nr
Match: KGN56528.1 (Dead box ATP-dependent RNA helicase [Cucumis sativus])

HSP 1 Score: 939.9 bits (2428), Expect = 3.6e-270
Identity = 487/497 (97.99%), Postives = 491/497 (98.79%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN-----QXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPTNRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg21011 vs. NCBI nr
Match: XP_022940370.1 (DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata])

HSP 1 Score: 933.3 bits (2411), Expect = 3.3e-268
Identity = 491/503 (97.61%), Postives = 496/503 (98.61%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN------XXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNQXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRT 120
           XXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+T
Sbjct: 61  XXXXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKT 120

Query: 121 EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 180
           EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT
Sbjct: 121 EDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKT 180

Query: 181 AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDD 240
           AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDD
Sbjct: 181 AAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDD 240

Query: 241 IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP 300
           IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIE LIRFLP
Sbjct: 241 IMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEQLIRFLP 300

Query: 301 SNRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTL 360
           +NRQ+LMYSATFPVTVKDFKDRYLH+PYIINLMDELTLKGITQFYAFVEERQKVHCLNTL
Sbjct: 301 ANRQVLMYSATFPVTVKDFKDRYLHRPYIINLMDELTLKGITQFYAFVEERQKVHCLNTL 360

Query: 361 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 420
           FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL
Sbjct: 361 FSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNL 420

Query: 421 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR 480
           VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR
Sbjct: 421 VCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYR 480

Query: 481 IEQELGTEIKQIPPHIDQAIYCQ 498
           IEQELGTEIKQIPPHIDQAIYC+
Sbjct: 481 IEQELGTEIKQIPPHIDQAIYCR 503

[Close]
BLAST of Carg21011 vs. TAIR10
Match: AT4G00660.2 (RNAhelicase-like 8)

HSP 1 Score: 827.0 bits (2135), Expect = 6.1e-240
Identity = 440/506 (86.96%), Postives = 463/506 (91.50%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQY--------VQRNLVPNXXXXXXXXXX 60
           MNNRGRYPPGIGAGR G  N NP++QSR   QQ+                XXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGR-GAFNPNPNYQSRSGYQQHXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSN-VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 120
           XXXXXXXXXXXX L+R Q+ GG ++ + V EVEKTVQSE +D +S+DWKARLK+P PDTR
Sbjct: 61  XXXXXXXXXXXXWLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTR 120

Query: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180
           YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGT
Sbjct: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 180

Query: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSL 240
           GKTAAFCIP LEKIDQDNNVIQ VI+VPTRELALQTSQVCKELGK+L IQVMVTTGGTSL
Sbjct: 181 GKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 240

Query: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIR 300
           KDDIMRLYQPVHLLVGTPGRILDL KKGVCVLKDCS+L+MDEADKLLS EFQPS+EHLI 
Sbjct: 241 KDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLIS 300

Query: 301 FLPSNRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCL 360
           FLP +RQILM+SATFPVTVKDFKDR+L  PY+INLMDELTLKGITQFYAFVEERQK+HCL
Sbjct: 301 FLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCL 360

Query: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420
           NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
Sbjct: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420

Query: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480
           RNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFN
Sbjct: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480

Query: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 498
           LYRIEQELGTEIKQIPPHIDQAIYCQ
Sbjct: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 505

[Close]
BLAST of Carg21011 vs. TAIR10
Match: AT3G61240.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 758.8 bits (1958), Expect = 2.0e-219
Identity = 406/502 (80.88%), Postives = 443/502 (88.25%), Query Frame = 0 

Query: 3   NRGRYPPGIGAGRGGGVNANPSF------QSRPHQQQYVQRNLVPNXXXXXXXXXXXXXX 62
           NRGRYPPG+G GR  G   NP +      Q  P  QQYVQR     XXXXXXXXXXXXXX
Sbjct: 4   NRGRYPPGVGTGR--GAPPNPDYHQSYRQQQPPQDQQYVQRGYXXXXXXXXXXXXXXXXX 63

Query: 63  XXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEA-VDSSSQDWKARLKIPPPDTRYRTE 122
           XXXXXXXX     QL G  +++N + V++T Q EA  D++ QDWKA L++PPPDTRY+T 
Sbjct: 64  XXXXXXXXP----QLPGNASNAN-EVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTA 123

Query: 123 DVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 182
           DVTATKGNEFEDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT 
Sbjct: 124 DVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTG 183

Query: 183 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDI 242
           AFCIP LEKID +NNVIQ +ILVPTRELALQTSQVCKEL K LNIQVMVTTGGTSL+DDI
Sbjct: 184 AFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDI 243

Query: 243 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPS 302
           MRL+QPVHLLVGTPGRILDL KKGVCVLKDC+ML+MDEADKLLS EFQPS+E LI+FLP 
Sbjct: 244 MRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ 303

Query: 303 NRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLF 362
           NRQ LM+SATFPVTVK FKDR+L KPY+INLMD+LTL G+TQ+YAFVEERQKVHCLNTLF
Sbjct: 304 NRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLF 363

Query: 363 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 422
           SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLV
Sbjct: 364 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 423

Query: 423 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 482
           CTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ 
Sbjct: 424 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 483

Query: 483 EQELGTEIKQIPPHIDQAIYCQ 498
           EQELGTEIK IP +IDQAIYCQ
Sbjct: 484 EQELGTEIKPIPSNIDQAIYCQ 498

[Close]
BLAST of Carg21011 vs. TAIR10
Match: AT2G45810.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 755.4 bits (1949), Expect = 2.3e-218
Identity = 374/432 (86.57%), Postives = 402/432 (93.06%), Query Frame = 0 

Query: 67  KRNQLGGGPADSNVDEVEKTVQSEAV-DSSSQDWKARLKIPPPDTRYRTEDVTATKGNEF 126
           +R QL G P  S +DEVEKTVQSEA+ DS+++DWKA LK+PP D RY+TEDVTATKGNEF
Sbjct: 99  RRAQLPGDP--SYIDEVEKTVQSEAISDSNNEDWKATLKLPPRDNRYQTEDVTATKGNEF 158

Query: 127 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 186
           EDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT AFCIP LEKI
Sbjct: 159 EDYFLKRDLLRGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTGAFCIPTLEKI 218

Query: 187 DQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL 246
           D +NNVIQ VILVPTRELALQTSQVCKEL K L I+VMVTTGGTSL+DDIMRLYQPVHLL
Sbjct: 219 DPENNVIQAVILVPTRELALQTSQVCKELSKYLKIEVMVTTGGTSLRDDIMRLYQPVHLL 278

Query: 247 VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMYSAT 306
           VGTPGRILDLAKKGVCVLKDC+ML+MDEADKLLS EFQPSIE LI+FLP +RQILM+SAT
Sbjct: 279 VGTPGRILDLAKKGVCVLKDCAMLVMDEADKLLSVEFQPSIEELIQFLPESRQILMFSAT 338

Query: 307 FPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 366
           FPVTVK FKDRYL KPYIINLMD+LTL G+TQ+YAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 339 FPVTVKSFKDRYLKKPYIINLMDQLTLMGVTQYYAFVEERQKVHCLNTLFSKLQINQSII 398

Query: 367 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 426
           FCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 399 FCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHDFRNGACRNLVCTDLFTRGID 458

Query: 427 IQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 486
           IQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ EQELGTEIK 
Sbjct: 459 IQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQTEQELGTEIKP 518

Query: 487 IPPHIDQAIYCQ 498
           IP  ID+AIYCQ
Sbjct: 519 IPSLIDKAIYCQ 528

[Close]
BLAST of Carg21011 vs. TAIR10
Match: AT3G19760.1 (eukaryotic initiation factor 4A-III)

HSP 1 Score: 290.0 bits (741), Expect = 2.7e-78
Identity = 145/372 (38.98%), Postives = 233/372 (62.63%), Query Frame = 0 

Query: 125 FEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEK 184
           F D  +K ++L G+YE GFE+PS IQ+ ++   L G D++A+A++GTGKT+   +   + 
Sbjct: 37  FNDMGIKEDVLRGVYEYGFEKPSAIQQRAVMPILQGRDVIAQAQSGTGKTSMIALSVCQV 96

Query: 185 IDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHL 244
           +D  +  +Q +IL PTRELA QT +  + +G + NIQ     GG S+ +DI +L   VH+
Sbjct: 97  VDTSSREVQALILSPTRELATQTEKTIQAIGLHANIQAHACIGGNSVGEDIRKLEHGVHV 156

Query: 245 LVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMYSA 304
           + GTPGR+ D+ K+     +   +LI+DE+D++LS  F+  I  + R+LP + Q+ + SA
Sbjct: 157 VSGTPGRVCDMIKRRSLRTRAIKLLILDESDEMLSRGFKDQIYDVYRYLPPDLQVCLVSA 216

Query: 305 TFPVTVKDFKDRYLHKPY-IINLMDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQINQ 364
           T P  + +   +++ +P  I+   DELTL+GI QF+  VE E  K   L  L+  L I Q
Sbjct: 217 TLPHEILEMTSKFMTEPVKILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQ 276

Query: 365 SIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTR 424
           ++IFCN+  +V+ L++K+    ++   +H  M Q  R+ + ++FR+G  R L+ TD++ R
Sbjct: 277 AVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWAR 336

Query: 425 GIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTE 484
           GID+Q V++VIN+D P N E Y+HR+GRSGRFG  G+A+N +  +D   L  IEQ   T+
Sbjct: 337 GIDVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKSDDIKILRDIEQYYSTQ 396

Query: 485 IKQIPPHIDQAI 495
           I ++P ++   I
Sbjct: 397 IDEMPMNVADLI 408

[Close]
BLAST of Carg21011 vs. TAIR10
Match: AT1G72730.1 (DEA(D/H)-box RNA helicase family protein)

HSP 1 Score: 276.6 bits (706), Expect = 3.1e-74
Identity = 146/370 (39.46%), Postives = 224/370 (60.54%), Query Frame = 0 

Query: 123 NEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPAL 182
           + F+   L+ +LL GIY  GFE+PS IQ+  I     G D++ +A++GTGKTA FC   L
Sbjct: 41  DSFDAMELQPDLLRGIYAYGFEKPSAIQQRGIIPFCKGLDVIQQAQSGTGKTATFCSGVL 100

Query: 183 EKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPV 242
           +++D      Q ++L PTRELA Q  +V + LG  L ++     GGTS+++D   L   V
Sbjct: 101 QQLDISLVQCQALVLAPTRELAQQIEKVMRALGDYLGVKAQACVGGTSVREDQRVLQSGV 160

Query: 243 HLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMY 302
           H++VGTPGR+ DL ++         M ++DEAD++LS  F+  I  + + LPS  Q+ ++
Sbjct: 161 HVVVGTPGRVFDLLRRQSLRADAIKMFVLDEADEMLSRGFKDQIYDIFQLLPSKVQVGVF 220

Query: 303 SATFPVTVKDFKDRYLHKPY-IINLMDELTLKGITQFYAFVE-ERQKVHCLNTLFSKLQI 362
           SAT P    +   ++++KP  I+   DELTL+GI QFY  V+ E  K+  L  L+  L I
Sbjct: 221 SATMPPEALEITRKFMNKPVRILVKRDELTLEGIKQFYVNVDKEEWKLETLCDLYETLAI 280

Query: 363 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 422
            QS+IF N+  +V+ L  K+    ++    H  M Q+ R+ +  +FR+G+ R L+ TDL 
Sbjct: 281 TQSVIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLL 340

Query: 423 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 482
            RGID+Q V++VINFD P   E YLHR+GRSGRFG  G+A+N +T ED   +  I++   
Sbjct: 341 ARGIDVQQVSLVINFDLPTQPENYLHRIGRSGRFGRKGVAINFMTSEDERMMADIQRFYN 400

Query: 483 TEIKQIPPHI 491
             ++++P ++
Sbjct: 401 VVVEELPSNV 410

[Close]
BLAST of Carg21011 vs. Swiss-Prot
Match: sp|Q8RXK6|RH8_ARATH (DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=2 SV=1)

HSP 1 Score: 827.0 bits (2135), Expect = 1.1e-238
Identity = 440/506 (86.96%), Postives = 463/506 (91.50%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQY--------VQRNLVPNXXXXXXXXXX 60
           MNNRGRYPPGIGAGR G  N NP++QSR   QQ+                XXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGR-GAFNPNPNYQSRSGYQQHXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXXXXXLKRNQLGGGPADSN-VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTR 120
           XXXXXXXXXXXX L+R Q+ GG ++ + V EVEKTVQSE +D +S+DWKARLK+P PDTR
Sbjct: 61  XXXXXXXXXXXXWLRRGQIPGGNSNGDAVVEVEKTVQSEVIDPNSEDWKARLKLPAPDTR 120

Query: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGT 180
           YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTG DILARAKNGT
Sbjct: 121 YRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGRDILARAKNGT 180

Query: 181 GKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSL 240
           GKTAAFCIP LEKIDQDNNVIQ VI+VPTRELALQTSQVCKELGK+L IQVMVTTGGTSL
Sbjct: 181 GKTAAFCIPVLEKIDQDNNVIQAVIIVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSL 240

Query: 241 KDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIR 300
           KDDIMRLYQPVHLLVGTPGRILDL KKGVCVLKDCS+L+MDEADKLLS EFQPS+EHLI 
Sbjct: 241 KDDIMRLYQPVHLLVGTPGRILDLTKKGVCVLKDCSVLVMDEADKLLSQEFQPSVEHLIS 300

Query: 301 FLPSNRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCL 360
           FLP +RQILM+SATFPVTVKDFKDR+L  PY+INLMDELTLKGITQFYAFVEERQK+HCL
Sbjct: 301 FLPESRQILMFSATFPVTVKDFKDRFLTNPYVINLMDELTLKGITQFYAFVEERQKIHCL 360

Query: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420
           NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC
Sbjct: 361 NTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGAC 420

Query: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480
           RNLVCTDLFTRGIDIQAVNVVINFDFPKN+ETYLHRVGRSGRFGHLGLAVNLITYEDRFN
Sbjct: 421 RNLVCTDLFTRGIDIQAVNVVINFDFPKNAETYLHRVGRSGRFGHLGLAVNLITYEDRFN 480

Query: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 498
           LYRIEQELGTEIKQIPPHIDQAIYCQ
Sbjct: 481 LYRIEQELGTEIKQIPPHIDQAIYCQ 505

[Close]
BLAST of Carg21011 vs. Swiss-Prot
Match: sp|Q7XMK8|RH6_ORYSJ (DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0533000 PE=2 SV=1)

HSP 1 Score: 783.1 bits (2021), Expect = 1.8e-225
Identity = 387/432 (89.58%), Postives = 410/432 (94.91%), Query Frame = 0 

Query: 66  LKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEF 125
           L+RNQ+    A ++  E +    ++ +DSSSQDWKA+LK+PP DTRYRTEDVTATKGNEF
Sbjct: 69  LRRNQIAAEAAGAS--EQKAPPVADGIDSSSQDWKAQLKLPPQDTRYRTEDVTATKGNEF 128

Query: 126 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 185
           EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI
Sbjct: 129 EDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKI 188

Query: 186 DQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLL 245
           DQD N IQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLKDDI+RLYQPVHLL
Sbjct: 189 DQDKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGTSLKDDIVRLYQPVHLL 248

Query: 246 VGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMYSAT 305
           VGTPGRILDL KKGVCVLK+CSML+MDEADKLLSPEFQPSI+ LIR+LPSNRQILM+SAT
Sbjct: 249 VGTPGRILDLTKKGVCVLKNCSMLVMDEADKLLSPEFQPSIQELIRYLPSNRQILMFSAT 308

Query: 306 FPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 365
           FPVTVK+FKD+YL KPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII
Sbjct: 309 FPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSII 368

Query: 366 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 425
           FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID
Sbjct: 369 FCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGID 428

Query: 426 IQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQ 485
           IQAVNVVINFDFPK++ETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK 
Sbjct: 429 IQAVNVVINFDFPKSAETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKP 488

Query: 486 IPPHIDQAIYCQ 498
           IPP ID+AIYCQ
Sbjct: 489 IPPQIDRAIYCQ 498

[Close]
BLAST of Carg21011 vs. Swiss-Prot
Match: sp|Q6H7S2|RH8_ORYSJ (DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0641800 PE=2 SV=2)

HSP 1 Score: 777.7 bits (2007), Expect = 7.7e-224
Identity = 419/508 (82.48%), Postives = 442/508 (87.01%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           M+ R RYPPGIG GRGG  N                      XXXXXXXXXXXXXXXXXX
Sbjct: 1   MDPRARYPPGIGNGRGGNPNYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLK-----------RNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPD 120
           XXXXX               +  G   +S    V ++   + +DSSSQDWKA+LK+PP D
Sbjct: 61  XXXXXXXXXXXXXXXXQIAREAAGTDRNSEPKAVAQSPAVDGIDSSSQDWKAQLKLPPQD 120

Query: 121 TRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180
           TRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN
Sbjct: 121 TRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKN 180

Query: 181 GTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGT 240
           GTGKTAAFCIPALEKIDQ+ N IQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGT
Sbjct: 181 GTGKTAAFCIPALEKIDQEKNAIQVVILVPTRELALQTSQVCKELGKHLKIQVMVTTGGT 240

Query: 241 SLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHL 300
           SLKDDI+RLYQPVHLLVGTPGRILDL KKG+C+LKDCSMLIMDEADKLLSPEFQPS+E L
Sbjct: 241 SLKDDIIRLYQPVHLLVGTPGRILDLTKKGICILKDCSMLIMDEADKLLSPEFQPSVEQL 300

Query: 301 IRFLPSNRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVH 360
           IR+LP++RQILM+SATFPVTVK+FKD+YL KPY+INLMDELTLKGITQFYAFVEERQKVH
Sbjct: 301 IRYLPASRQILMFSATFPVTVKEFKDKYLPKPYVINLMDELTLKGITQFYAFVEERQKVH 360

Query: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420
           CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG
Sbjct: 361 CLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNG 420

Query: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDR 480
           ACRNLVCTDLFTRGIDIQAVNVVINFDFPK +ETYLHRVGRSGRFGHLGLAVNLITYEDR
Sbjct: 421 ACRNLVCTDLFTRGIDIQAVNVVINFDFPKTAETYLHRVGRSGRFGHLGLAVNLITYEDR 480

Query: 481 FNLYRIEQELGTEIKQIPPHIDQAIYCQ 498
           FNLYRIEQELGTEIK IPP IDQAIYCQ
Sbjct: 481 FNLYRIEQELGTEIKPIPPQIDQAIYCQ 508

[Close]
BLAST of Carg21011 vs. Swiss-Prot
Match: sp|Q109G2|RH12_ORYSJ (DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0503700 PE=2 SV=2)

HSP 1 Score: 771.9 bits (1992), Expect = 4.2e-222
Identity = 377/410 (91.95%), Postives = 395/410 (96.34%), Query Frame = 0 

Query: 88  QSEAVDSSSQDWKARLKIPPPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS 147
           Q EAVDSSS+DWKA+L +P PDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS
Sbjct: 112 QLEAVDSSSEDWKAQLNLPAPDTRYRTEDVTATKGNEFEDYFLKRELLMGIYEKGFERPS 171

Query: 148 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDQDNNVIQVVILVPTRELALQT 207
           PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKID + N IQVVILVPTRELALQT
Sbjct: 172 PIQEESIPIALTGSDILARAKNGTGKTAAFCIPALEKIDPEKNAIQVVILVPTRELALQT 231

Query: 208 SQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQPVHLLVGTPGRILDLAKKGVCVLKDCS 267
           SQVCKELGK LNIQVMV+TGGTSLKDDIMRLYQPVHLLVGTPGRILDL +KG+CVLKDCS
Sbjct: 232 SQVCKELGKYLNIQVMVSTGGTSLKDDIMRLYQPVHLLVGTPGRILDLTRKGICVLKDCS 291

Query: 268 MLIMDEADKLLSPEFQPSIEHLIRFLPSNRQILMYSATFPVTVKDFKDRYLHKPYIINLM 327
           ML+MDEADKLL+PEFQPSIE LI FLP+NRQ+LM+SATFPVTVKDFK++YL +PY+INLM
Sbjct: 292 MLVMDEADKLLAPEFQPSIEQLIHFLPANRQLLMFSATFPVTVKDFKEKYLPRPYVINLM 351

Query: 328 DELTLKGITQFYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 387
           DELTLKGITQ+YAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC
Sbjct: 352 DELTLKGITQYYAFVEERQKVHCLNTLFSKLQINQSIIFCNSVNRVELLAKKITELGYSC 411

Query: 388 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKNSETYLHR 447
           FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPK SETYLHR
Sbjct: 412 FYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLFTRGIDIQAVNVVINFDFPKTSETYLHR 471

Query: 448 VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKQIPPHIDQAIYCQ 498
           VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIK IPP ID A+YCQ
Sbjct: 472 VGRSGRFGHLGLAVNLITYEDRFNLYRIEQELGTEIKTIPPQIDLAVYCQ 521

[Close]
BLAST of Carg21011 vs. Swiss-Prot
Match: sp|Q9M2E0|RH12_ARATH (DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana OX=3702 GN=RH12 PE=2 SV=1)

HSP 1 Score: 758.8 bits (1958), Expect = 3.7e-218
Identity = 406/502 (80.88%), Postives = 443/502 (88.25%), Query Frame = 0 

Query: 3   NRGRYPPGIGAGRGGGVNANPSF------QSRPHQQQYVQRNLVPNXXXXXXXXXXXXXX 62
           NRGRYPPG+G GR  G   NP +      Q  P  QQYVQR     XXXXXXXXXXXXXX
Sbjct: 4   NRGRYPPGVGTGR--GAPPNPDYHQSYRQQQPPQDQQYVQRGYXXXXXXXXXXXXXXXXX 63

Query: 63  XXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEA-VDSSSQDWKARLKIPPPDTRYRTE 122
           XXXXXXXX     QL G  +++N + V++T Q EA  D++ QDWKA L++PPPDTRY+T 
Sbjct: 64  XXXXXXXXP----QLPGNASNAN-EVVQQTTQPEASSDANGQDWKATLRLPPPDTRYQTA 123

Query: 123 DVTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTA 182
           DVTATKGNEFEDYFLKR+LL GIYEKGFE+PSPIQEESIPIALTGSDILARAKNGTGKT 
Sbjct: 124 DVTATKGNEFEDYFLKRDLLKGIYEKGFEKPSPIQEESIPIALTGSDILARAKNGTGKTG 183

Query: 183 AFCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDI 242
           AFCIP LEKID +NNVIQ +ILVPTRELALQTSQVCKEL K LNIQVMVTTGGTSL+DDI
Sbjct: 184 AFCIPVLEKIDPNNNVIQAMILVPTRELALQTSQVCKELSKYLNIQVMVTTGGTSLRDDI 243

Query: 243 MRLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPS 302
           MRL+QPVHLLVGTPGRILDL KKGVCVLKDC+ML+MDEADKLLS EFQPS+E LI+FLP 
Sbjct: 244 MRLHQPVHLLVGTPGRILDLTKKGVCVLKDCAMLVMDEADKLLSAEFQPSLEELIQFLPQ 303

Query: 303 NRQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLF 362
           NRQ LM+SATFPVTVK FKDR+L KPY+INLMD+LTL G+TQ+YAFVEERQKVHCLNTLF
Sbjct: 304 NRQFLMFSATFPVTVKAFKDRHLRKPYVINLMDQLTLMGVTQYYAFVEERQKVHCLNTLF 363

Query: 363 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLV 422
           SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKM+QDHRNRVFH+FRNGACRNLV
Sbjct: 364 SKLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMVQDHRNRVFHEFRNGACRNLV 423

Query: 423 CTDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRI 482
           CTDLFTRGIDIQAVNVVINFDFP+ SE+YLHRVGRSGRFGHLGLAVNL+TYEDRF +Y+ 
Sbjct: 424 CTDLFTRGIDIQAVNVVINFDFPRTSESYLHRVGRSGRFGHLGLAVNLVTYEDRFKMYQT 483

Query: 483 EQELGTEIKQIPPHIDQAIYCQ 498
           EQELGTEIK IP +IDQAIYCQ
Sbjct: 484 EQELGTEIKPIPSNIDQAIYCQ 498

[Close]
BLAST of Carg21011 vs. TrEMBL
Match: tr|A0A1S3AVG3|A0A1S3AVG3_CUCME (DEAD-box ATP-dependent RNA helicase 8 OS=Cucumis melo OX=3656 GN=LOC103483283 PE=3 SV=1)

HSP 1 Score: 939.9 bits (2428), Expect = 2.4e-270
Identity = 487/497 (97.99%), Postives = 491/497 (98.79%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN-----QXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPANRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg21011 vs. TrEMBL
Match: tr|A0A0A0L495|A0A0A0L495_CUCSA (Dead box ATP-dependent RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G122520 PE=3 SV=1)

HSP 1 Score: 939.9 bits (2428), Expect = 2.4e-270
Identity = 487/497 (97.99%), Postives = 491/497 (98.79%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN      XXXXXXXXXXXX
Sbjct: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN-----QXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TEDVTAT
Sbjct: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPTNRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           MYSATFPVTVKDFKDRYLHKPY+INLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MYSATFPVTVKDFKDRYLHKPYVINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 492

[Close]
BLAST of Carg21011 vs. TrEMBL
Match: tr|A0A061DTF1|A0A061DTF1_THECC (RNAhelicase-like 8 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005373 PE=3 SV=1)

HSP 1 Score: 891.7 bits (2303), Expect = 7.4e-256
Identity = 473/501 (94.41%), Postives = 483/501 (96.41%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPN----XXXXXXXXXXXXXX 60
           MN+RGRYPPGIG GRGGGVNANPSFQSRP QQ YVQRNLV N    XXXXXXXXXXXXXX
Sbjct: 1   MNSRGRYPPGIGVGRGGGVNANPSFQSRPLQQHYVQRNLVQNHXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTED 120
           XXXXXXXXX +RN L GG   S VDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRY+TED
Sbjct: 61  XXXXXXXXXXRRNLLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYKTED 120

Query: 121 VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA 180
           VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA
Sbjct: 121 VTATKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAA 180

Query: 181 FCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIM 240
           FCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLKDDIM
Sbjct: 181 FCIPALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIM 240

Query: 241 RLYQPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSN 300
           RLYQPVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPS+E LIRFL +N
Sbjct: 241 RLYQPVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSVEQLIRFLSAN 300

Query: 301 RQILMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFS 360
           RQILM+SATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQ+YAFVEERQKVHCLNTLFS
Sbjct: 301 RQILMFSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFS 360

Query: 361 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 420
           KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC
Sbjct: 361 KLQINQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVC 420

Query: 421 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIE 480
           TDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIE
Sbjct: 421 TDLFTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIE 480

Query: 481 QELGTEIKQIPPHIDQAIYCQ 498
           QELGTEIKQIPPHIDQAIYC+
Sbjct: 481 QELGTEIKQIPPHIDQAIYCR 501

[Close]
BLAST of Carg21011 vs. TrEMBL
Match: tr|A0A0B0NJ32|A0A0B0NJ32_GOSAR (DEAD-box ATP-dependent RNA helicase 8-like protein OS=Gossypium arboreum OX=29729 GN=F383_18451 PE=3 SV=1)

HSP 1 Score: 886.3 bits (2289), Expect = 3.1e-254
Identity = 468/498 (93.98%), Postives = 478/498 (95.98%), Query Frame = 0 

Query: 1   MNNRGRY-PPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXX 60
           MN+RGRY PPGIG GRGGGVNANPSFQSRP QQ YVQRNLV     XXXXXXXXXXXXXX
Sbjct: 1   MNSRGRYPPPGIGVGRGGGVNANPSFQSRPSQQHYVQRNLV-----XXXXXXXXXXXXXX 60

Query: 61  XXXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTA 120
           XXXXX L+RN L GG   S +DEVEKTVQSEAVDSSSQDWKARLKIPP DTRY+TEDVTA
Sbjct: 61  XXXXXWLRRNHLPGGNDSSVIDEVEKTVQSEAVDSSSQDWKARLKIPPADTRYKTEDVTA 120

Query: 121 TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI 180
           TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI
Sbjct: 121 TKGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCI 180

Query: 181 PALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLY 240
           PALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLKDDIMRLY
Sbjct: 181 PALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLY 240

Query: 241 QPVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQI 300
           QPVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPSIE LIRFLP+NRQI
Sbjct: 241 QPVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQI 300

Query: 301 LMYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQ 360
           LM+SATFPVTVKDFKDRYL KPYIINLMDELTLKGITQ+YAFVEERQKVHCLNTLFSKLQ
Sbjct: 301 LMFSATFPVTVKDFKDRYLKKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQ 360

Query: 361 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 420
           INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL
Sbjct: 361 INQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDL 420

Query: 421 FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 480
           FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL
Sbjct: 421 FTRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQEL 480

Query: 481 GTEIKQIPPHIDQAIYCQ 498
           GTEIKQIPPHIDQAIYC+
Sbjct: 481 GTEIKQIPPHIDQAIYCR 493

[Close]
BLAST of Carg21011 vs. TrEMBL
Match: tr|A0A1U8PAN1|A0A1U8PAN1_GOSHI (DEAD-box ATP-dependent RNA helicase 8-like OS=Gossypium hirsutum OX=3635 GN=LOC107957248 PE=3 SV=1)

HSP 1 Score: 886.3 bits (2289), Expect = 3.1e-254
Identity = 469/497 (94.37%), Postives = 481/497 (96.78%), Query Frame = 0 

Query: 1   MNNRGRYPPGIGAGRGGGVNANPSFQSRPHQQQYVQRNLVPNXXXXXXXXXXXXXXXXXX 60
           MN+RGRYPPGIG GRGGGVNANPSFQSRP QQ YVQRNL   XXXXXXXXXXXXXXXXXX
Sbjct: 1   MNSRGRYPPGIGVGRGGGVNANPSFQSRPSQQHYVQRNL-XXXXXXXXXXXXXXXXXXXX 60

Query: 61  XXXXXLKRNQLGGGPADSNVDEVEKTVQSEAVDSSSQDWKARLKIPPPDTRYRTEDVTAT 120
           XXXXX +R+QL GG   S VDEVEKTVQSEAVDSSSQDWKARL +PPPDTRY+TEDVTAT
Sbjct: 61  XXXXXXRRDQLPGGNDSSVVDEVEKTVQSEAVDSSSQDWKARLNVPPPDTRYKTEDVTAT 120

Query: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180
           KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP
Sbjct: 121 KGNEFEDYFLKRELLMGIYEKGFERPSPIQEESIPIALTGSDILARAKNGTGKTAAFCIP 180

Query: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKNLNIQVMVTTGGTSLKDDIMRLYQ 240
           ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGK+L IQVMVTTGGTSLKDDIMRLYQ
Sbjct: 181 ALEKIDQDNNVIQVVILVPTRELALQTSQVCKELGKHLQIQVMVTTGGTSLKDDIMRLYQ 240

Query: 241 PVHLLVGTPGRILDLAKKGVCVLKDCSMLIMDEADKLLSPEFQPSIEHLIRFLPSNRQIL 300
           PVHLLVGTPGRILDLAKKGVC+LKDCSMLIMDEADKLLSPEFQPSIE LIRFLP+NRQIL
Sbjct: 241 PVHLLVGTPGRILDLAKKGVCILKDCSMLIMDEADKLLSPEFQPSIEQLIRFLPANRQIL 300

Query: 301 MYSATFPVTVKDFKDRYLHKPYIINLMDELTLKGITQFYAFVEERQKVHCLNTLFSKLQI 360
           M+SATFPVTVKDFKD+YL KPYIINLMDELTLKGITQ+YAFVEERQKVHCLNTLFSKLQI
Sbjct: 301 MFSATFPVTVKDFKDKYLKKPYIINLMDELTLKGITQYYAFVEERQKVHCLNTLFSKLQI 360

Query: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420
           NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF
Sbjct: 361 NQSIIFCNSVNRVELLAKKITELGYSCFYIHAKMLQDHRNRVFHDFRNGACRNLVCTDLF 420

Query: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480
           TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG
Sbjct: 421 TRGIDIQAVNVVINFDFPKNSETYLHRVGRSGRFGHLGLAVNLITYEDRFNLYRIEQELG 480

Query: 481 TEIKQIPPHIDQAIYCQ 498
           TEIKQIPPHIDQAIYC+
Sbjct: 481 TEIKQIPPHIDQAIYCR 496

The following BLAST results are available for this feature:
BLAST of Carg21011 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022924437.11.0e-272100.00DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata] >XP_022980274.1 ... [more]
XP_004133869.13.6e-27097.99PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis sativus] >XP_011650758... [more]
XP_008438061.13.6e-27097.99PREDICTED: DEAD-box ATP-dependent RNA helicase 8 [Cucumis melo] >XP_008438062.1 ... [more]
KGN56528.13.6e-27097.99Dead box ATP-dependent RNA helicase [Cucumis sativus][more]
XP_022940370.13.3e-26897.61DEAD-box ATP-dependent RNA helicase 8-like [Cucurbita moschata][more]
BLAST of Carg21011 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G00660.26.1e-24086.96RNAhelicase-like 8[more]
AT3G61240.12.0e-21980.88DEA(D/H)-box RNA helicase family protein[more]
AT2G45810.12.3e-21886.57DEA(D/H)-box RNA helicase family protein[more]
AT3G19760.12.7e-7838.98eukaryotic initiation factor 4A-III[more]
AT1G72730.13.1e-7439.46DEA(D/H)-box RNA helicase family protein[more]
BLAST of Carg21011 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q8RXK6|RH8_ARATH1.1e-23886.96DEAD-box ATP-dependent RNA helicase 8 OS=Arabidopsis thaliana OX=3702 GN=RH8 PE=... [more]
sp|Q7XMK8|RH6_ORYSJ1.8e-22589.58DEAD-box ATP-dependent RNA helicase 6 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|Q6H7S2|RH8_ORYSJ7.7e-22482.48DEAD-box ATP-dependent RNA helicase 8 OS=Oryza sativa subsp. japonica OX=39947 G... [more]
sp|Q109G2|RH12_ORYSJ4.2e-22291.95DEAD-box ATP-dependent RNA helicase 12 OS=Oryza sativa subsp. japonica OX=39947 ... [more]
sp|Q9M2E0|RH12_ARATH3.7e-21880.88DEAD-box ATP-dependent RNA helicase 12 OS=Arabidopsis thaliana OX=3702 GN=RH12 P... [more]
BLAST of Carg21011 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3AVG3|A0A1S3AVG3_CUCME2.4e-27097.99DEAD-box ATP-dependent RNA helicase 8 OS=Cucumis melo OX=3656 GN=LOC103483283 PE... [more]
tr|A0A0A0L495|A0A0A0L495_CUCSA2.4e-27097.99Dead box ATP-dependent RNA helicase OS=Cucumis sativus OX=3659 GN=Csa_3G122520 P... [more]
tr|A0A061DTF1|A0A061DTF1_THECC7.4e-25694.41RNAhelicase-like 8 isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005373 PE=3 SV=1[more]
tr|A0A0B0NJ32|A0A0B0NJ32_GOSAR3.1e-25493.98DEAD-box ATP-dependent RNA helicase 8-like protein OS=Gossypium arboreum OX=2972... [more]
tr|A0A1U8PAN1|A0A1U8PAN1_GOSHI3.1e-25494.37DEAD-box ATP-dependent RNA helicase 8-like OS=Gossypium hirsutum OX=3635 GN=LOC1... [more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
GO:0005524ATP binding
Vocabulary: INTERPRO
TermDefinition
IPR027417P-loop_NTPase
IPR014014RNA_helicase_DEAD_Q_motif
IPR000629RNA-helicase_DEAD-box_CS
IPR011545DEAD/DEAH_box_helicase_dom
IPR001650Helicase_C
IPR014001Helicase_ATP-bd
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0005524 ATP binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg21011-RACarg21011-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 42..62
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 328..497
e-value: 2.8E-54
score: 184.9
NoneNo IPR availableGENE3DG3DSA:3.40.50.300coord: 82..327
e-value: 1.7E-66
score: 226.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 20..68
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 37..497
NoneNo IPR availablePANTHERPTHR24031:SF555DEAD-BOX ATP-DEPENDENT RNA HELICASE 8coord: 37..497
NoneNo IPR availableCDDcd00268DEADccoord: 125..325
e-value: 4.47837E-96
score: 290.925
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 142..338
e-value: 8.6E-57
score: 204.7
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 154..324
score: 28.793
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 374..455
e-value: 1.3E-30
score: 117.7
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 349..455
e-value: 6.8E-28
score: 97.2
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 334..494
score: 24.133
IPR001650Helicase, C-terminalCDDcd00079HELICccoord: 335..463
e-value: 1.72333E-39
score: 139.295
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 148..312
e-value: 8.9E-44
score: 149.2
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 270..278
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 123..151
score: 10.097
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILYSSF52540P-loop containing nucleoside triphosphate hydrolasescoord: 193..477