Carg20989 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20989
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	DNA replication complex GINS protein SLD5
Location	Cucurbita_argyrosperma_scaffold_170 : 207201 .. 210011 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCATCAAGTTTGGGAGGGGCGTCGGTGTCGCAAACAGATGATTTTGAGACGTTCACTCCAACGACAGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAAGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAATTAATGGTATTCCAGAATTCTGCCTTAATGCCTGTTTAGTTCCCAAGGAATTTTAGGGAAAGAAAATCAGTTGCAATATCACAACTGATGCAATCCCGATGTTGTTAATTATGGAATAATTGAATATCACCTCTGGAATTTTAGTAATTCAAGATTTCATTTACATAAAATCCAGTTTCTGAAATTGCAATTTTAGTTCATATATTTGATTCTCAAAATTTATTTTATAAATTTATAAAAAGAATTGGTAATTGTCCGATCAACGCCCTCTTGTTTCACATTCCACACACACAAAATTATCATACAGATTTTCTTGGTAGCAAACTAAAAATACATATTGATACATTGTTCTTAAATTATAATAATTCTTCAATTGTGTGGTCCATTTACCTCATTCATAGATTACTGACATTGATACCATTCTCATCCGTTTTCAGGAAGATACTATAGAGGAGTATTCAAGAAGTGGCATCGATCCCCTAATTGTATCACTCTATCAGATGGATTTAGATAGGACACAGTTCTTGTTAAGATCATATATTAGGATTCGCTTACAGAAGGTACAACCTAACTATAGTTTAGTTTTGTTCGGAGACAGTAGTTATGCTTTTGTTTCTCGTTTTTCCTTTTCTCCATTTTATATTTCATGTAAGTTCATAATGATTTCATTGCGTTTGAAATCATACTTTTGTACATTCCACACAAGCATAGAGAACAGATCATGACCCAACTAGAAAATCGATTTAATTCTCCAACTCAAGTTCCATGTATGCTACTATTTCGCTTCCATAATTCTACTATTTCGCTTCCATAATTCTAAAACAATCTTTCTCCCCCAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAGGAAGAGATAACATTTACTGATAGGTGAATGCTATATCATATTGTTCATTTTCTAATGGTCTAGTTGTTTTCTTCTTCTTCTGACATTCATGTTGTGGCGCAGGTGTAGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAATAAGTGAAGAGGATGACATGGGTACTCAAACACCTTCAAAATAAATTCTTTGATTGTTTACATAAAGCACTGAATCACATGCTCTCTCACCTTTTTTTTTTTTTTTTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTTTTAATGTTCACATTCATGTTATGTATTCCTCAATTTGAATCTGCAGATGGTAATGTATGTGGACACGGTGCAATTCCTTTAGTAAGATCAATCTATTGGGTCTTGGTTCGTTAAAGAGCATTGATGAACTTCTTTGATTAAATAGTTCATAATGGAATTGCAATAATTTTAAGAAGTTAAGGTTCCGAAAGATTTAGCTTCCTTTCAGTATTCCTATCATTGGTGCTTTTCAAAGAACTGCATAGGTGCTCGGAATTAGAACTTATTCGATACTTCCATGCGATGTTCTCTGACAATGTATCGGCACGAGAGTAACTTAAAGTCAATATGTAGAATAGTTCAGATCAATTCTCATGTAGGATTTTTATTTCCAATCTGCCGCCATATTTTTTTTCTCTCCCATGCTTCTTAGTTGGATGTCTCGTCAGATGGTGTGAATTTGTCCTGCTTTATAAACTGTCAGATTTTTTTTTTTGGGTTTAAATACTCTTTGGTCCCTATATTTTTTGCCTTGATTCATTTTGTTTCTTGAACTTTTATCATTGGTTCGTTTTGATTTCTATATTTTCAAAATGTCCATTTTGGTCCCCGTACTTTTAAAAACCTACCATTTTGGTCCATTCATTTTTCTTATATTGATTTGGCTTATTTCTGCATCGTATTCCTTTGGAAGTTATCAGCACGTGTGAAATTTTATTGATGTAAATTTGATTAATTACATGTTATTTGAATGTTCATGATTTTGGTTTTGTCTGATTCAGTTCCAGAACCTCCACTGGACACGTTTGTGGTCTGCAAAAGTAAGGAGTATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAGTGTAACTTTTCTTTTCCCTCTTTTGTATCATTTTACTCCTTTTGTAGTTTCCATTTTTTTTTTTTTTGGCTATTATATATGATTATTTCTAAAGCATATCAAATTCTACAGAGAGGAACCGTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCTATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAGACAATCTCCACAGCAGCTTTCAACATCGGTACCCCTCACCATCTTTATTATCTTGCATCTCGTCTTGGTCAATCGTGTGTGATAAAAGGCATTTTTCAAGTTAGTTTTGGTAGTTTCATGGCCTTAATGGTGGTCACTGTTCCACAAAGCAAATAATGTTAAGAGCAGTTGAAACGTTTGAAAACCGTTCCTGGATGGATTTTCAAGGTAATCAATTGTCCATAATGAACTATGTAGCATCAGTGCAACCAACTGCTAAAATAGTTATGGCATCTGCCTTGAACTTGACTTTTGACATATTTTTATTTGTATACAGATGGTACTGATTTCTTTTATATATATATA

mRNA sequence

ATGGCATCAAGTTTGGGAGGGGCGTCGGTGTCGCAAACAGATGATTTTGAGACGTTCACTCCAACGACAGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAAGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAATTAATGGAAGATACTATAGAGGAGTATTCAAGAAGTGGCATCGATCCCCTAATTGTATCACTCTATCAGATGGATTTAGATAGGACACAGTTCTTGTTAAGATCATATATTAGGATTCGCTTACAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAGGAAGAGATAACATTTACTGATAGGTGTAGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAATAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACGTTTGTGGTCTGCAAAAGTAAGGAGTATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAGTAGAGGAACCGTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCTATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAGACAATCTCCACAGCAGCTTTCAACATCGGTACCCCTCACCATCTTTATTATCTTGCATCTCGTCTTGGTCAATCGTGTGTGATAAAAGGCATTTTTCAAGTTAGTTTTGGTAGTTTCATGGCCTTAATGGTGGTCACTGTTCCACAAAGCAAATAATGTTAAGAGCAGTTGAAACGTTTGAAAACCGTTCCTGGATGGATTTTCAAGGTAATCAATTGTCCATAATGAACTATGTAGCATCAGTGCAACCAACTGCTAAAATAGTTATGGCATCTGCCTTGAACTTGACTTTTGACATATTTTTATTTGTATACAGATGGTACTGATTTCTTTTATATATATATA

Coding sequence (CDS)

ATGGCATCAAGTTTGGGAGGGGCGTCGGTGTCGCAAACAGATGATTTTGAGACGTTCACTCCAACGACAGATGTTGAGCCTCTAAAGAGGGCCTGGCGTAATGAAAAAGCTGCTCCTGAGATTCTACCCTTTGAGGCATCTTTGGTTGGGAGAATCAAAGAGCAGATTCAATTAATGGAAGATACTATAGAGGAGTATTCAAGAAGTGGCATCGATCCCCTAATTGTATCACTCTATCAGATGGATTTAGATAGGACACAGTTCTTGTTAAGATCATATATTAGGATTCGCTTACAGAAGATTGAGAAGTACATGCTCTATATCTTGAAGTCAGATGAACTTTTCAGACGTCTTTCTGAGGAAGAGATAACATTTACTGATAGGTGTAGTCATGATATGAAAAAACATTTTGATGAGAGTGTTCTATCAAAATTGCCAAATAATTATCAGGACATTTTGAGGCAATCTATAATAAGTGAAGAGGATGACATGGTTCCAGAACCTCCACTGGACACGTTTGTGGTCTGCAAAAGTAAGGAGTATCTTGAACATATACAGCTTGAGGATGAGGAAGAGAGGGCATCTAGTAGAGTAGAGGAACCGTTTGAGATGGAGGCCAATGTATTACACATTATTCGCTACAAGCCTATAAAATCACTTGTAGAGAGCGGGAGAATTGATTTGCTGTAG

Protein sequence

MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSEEEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL

Homology

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BLAST of Carg20989 vs. NCBI nr
Match: XP_022924491.1 (DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924492.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924493.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924494.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924495.1 DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022980813.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980814.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980816.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980817.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_022980818.1 DNA replication complex GINS protein SLD5 [Cucurbita maxima] >XP_023526386.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo] >XP_023526387.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo] >XP_023526388.1 DNA replication complex GINS protein SLD5 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 442.2 bits (1136), Expect = 1.1e-120
Identity = 229/229 (100.00%), Postives = 229/229 (100.00%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME
Sbjct: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 229

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BLAST of Carg20989 vs. NCBI nr
Match: XP_008438015.1 (PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >XP_008438016.1 PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >XP_008438017.1 PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo])

HSP 1 Score: 422.9 bits (1086), Expect = 6.8e-115
Identity = 215/229 (93.89%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           D+IEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELFRRLS+
Sbjct: 61  DSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSK 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQD+L+QSI SEEDDMVPEPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

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BLAST of Carg20989 vs. NCBI nr
Match: XP_004134322.2 (PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus] >XP_011650740.1 PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus] >KGN56501.1 hypothetical protein Csa_3G121760 [Cucumis sativus])

HSP 1 Score: 422.2 bits (1084), Expect = 1.2e-114
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           DTIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF RLS 
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQDIL+QSI SEEDDMVPEPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

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BLAST of Carg20989 vs. NCBI nr
Match: XP_022147485.1 (DNA replication complex GINS protein SLD5 [Momordica charantia])

HSP 1 Score: 409.1 bits (1050), Expect = 1.0e-110
Identity = 210/229 (91.70%), Postives = 219/229 (95.63%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MASSLGGA++SQTDDFE  TPT DVEPLKRAWRNEKAAPEILPFEASL+GRIKEQIQLME
Sbjct: 2   MASSLGGATMSQTDDFEASTPTNDVEPLKRAWRNEKAAPEILPFEASLIGRIKEQIQLME 61

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           +TIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLY+LKSDELF RLSE
Sbjct: 62  ETIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYMLKSDELFGRLSE 121

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EE  F +RC HD+K HFDESVLSKLPNNYQ ILRQSIISEEDDMVPEPPLDTFVVCKSKE
Sbjct: 122 EERVFAERCCHDVKSHFDESVLSKLPNNYQSILRQSIISEEDDMVPEPPLDTFVVCKSKE 181

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDE+ERASSR+EEPFEMEANVLHIIRYKPIKSLVESGRIDLL
Sbjct: 182 YLEHIQLEDEDERASSRLEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230

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BLAST of Carg20989 vs. NCBI nr
Match: XP_016899073.1 (PREDICTED: DNA replication complex GINS protein SLD5 isoform X2 [Cucumis melo])

HSP 1 Score: 315.1 bits (806), Expect = 2.0e-82
Identity = 161/174 (92.53%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 56  IQLMEDTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELF 115
           I   ED+IEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF
Sbjct: 28  IHSQEDSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELF 87

Query: 116 RRLSEEEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVV 175
           RRLS+EEITFTDRC HDMKKHFDESVLSKLPNNYQD+L+QSI SEEDDMVPEPPLDTFVV
Sbjct: 88  RRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVV 147

Query: 176 CKSKEYLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           CKSKEYLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 148 CKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 201

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BLAST of Carg20989 vs. TAIR10
Match: AT5G49010.1 (DNA replication protein-related)

HSP 1 Score: 249.2 bits (635), Expect = 2.4e-66
Identity = 134/227 (59.03%), Postives = 170/227 (74.89%), Query Frame = 0


Query: 3   SSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDT 62
           S  GG++     D+ET   T+DVE LKRAWRNEKAAPEIL +E +LV R KEQI+L+E+T
Sbjct: 5   SEAGGSA-----DYETLMSTSDVELLKRAWRNEKAAPEILQYEGALVDRAKEQIELVEET 64

Query: 63  IEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSEEE 122
           IE+Y  +GIDPL+VSLYQMDLDR QFLLRSY+R+RL KIEK+M + L S+E  RRLSE+E
Sbjct: 65  IEDYVENGIDPLVVSLYQMDLDRAQFLLRSYLRVRLLKIEKFMFHNLNSEEAERRLSEQE 124

Query: 123 ITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKEYL 182
             F  RC+ D+ KHF+E+VL KLP NYQ +L+QS+ISE DDMVP+P LDTFVVC+SK ++
Sbjct: 125 KVFATRCADDLAKHFEETVLLKLPENYQSVLKQSLISEVDDMVPQPHLDTFVVCRSKNFV 184

Query: 183 EHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
             + L +E E       E  EME   L+ IRYK +K  +ESG+IDL+
Sbjct: 185 S-LNLYEEGES-----PETVEMERGDLYFIRYKIVKRAIESGQIDLI 220

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BLAST of Carg20989 vs. Swiss-Prot
Match: sp|Q99LZ3|SLD5_MOUSE (DNA replication complex GINS protein SLD5 OS=Mus musculus OX=10090 GN=Gins4 PE=1 SV=1)

HSP 1 Score: 112.5 bits (280), Expect = 6.4e-24
Identity = 76/217 (35.02%), Postives = 119/217 (54.84%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLY 79
           TP   +E L++AW NEK APE+L  +A +V  + EQ++ ME+ +    R+    L VS++
Sbjct: 22  TPAELIEKLEQAWMNEKFAPELLESKAEIVECVMEQLEHMEENLR---RAKKGDLKVSIH 81

Query: 80  QMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRR-----LSEEEITFTDRCSHDMK 139
           +M+++R +++L SY+R RL KIEK+  +IL+ +++        LS EE  F        +
Sbjct: 82  RMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKVRSEGEPSSLSPEEFVFAKEYMDHTE 141

Query: 140 KHFDESVLSKLPNNYQ--DILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEE 199
            HF    L  +P N Q  D+LR          VP+P LD++V  + KE  E+I +E E +
Sbjct: 142 THFKNVALKHMPPNLQKVDLLR---------AVPKPDLDSYVFLRVKERQENILVEPEAD 201

Query: 200 RASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
                V    ++E    H+IRYK I  LV SG + L+
Sbjct: 202 EQRDYV---IDLEVGSQHLIRYKTIAPLVASGAVQLI 223

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BLAST of Carg20989 vs. Swiss-Prot
Match: sp|Q499W2|SLD5_RAT (DNA replication complex GINS protein SLD5 OS=Rattus norvegicus OX=10116 GN=Gins4 PE=1 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 7.1e-23
Identity = 76/232 (32.76%), Postives = 122/232 (52.59%), Query Frame = 0


Query: 5   LGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIE 64
           L G    +  +    TP   +E L++AW NEK APE+L  ++ +V  + EQ++ ME+ + 
Sbjct: 7   LHGQDSDEGSEEVVLTPAELIERLEQAWMNEKFAPELLESKSEIVECVMEQLEHMEENLR 66

Query: 65  EYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELF-----RRLS 124
              R+    L VS+++M+++R +++L SY+R RL KIEK+  +IL+ ++         LS
Sbjct: 67  ---RAKKGDLKVSIHRMEMERIRYVLSSYLRCRLMKIEKFFPHILEKEKTRPAGEPSSLS 126

Query: 125 EEEITFTDRCSHDMKKHFDESVLSKLPNNYQ--DILRQSIISEEDDMVPEPPLDTFVVCK 184
            EE  F        + HF    L  +P N Q  D++R          VP+P LD++V  +
Sbjct: 127 PEEFVFAKEYMDHTETHFKNVALKHMPPNLQKVDLMR---------AVPKPDLDSYVFLR 186

Query: 185 SKEYLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
            KE  E+I +E E +     V    ++E    H+IRYK I  LV SG + L+
Sbjct: 187 VKERQENILVEPEADEQRDYV---IDLEEGSQHLIRYKTIAPLVASGAVQLI 223

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BLAST of Carg20989 vs. Swiss-Prot
Match: sp|A2VE40|SLD5_BOVIN (DNA replication complex GINS protein SLD5 OS=Bos taurus OX=9913 GN=GINS4 PE=2 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 2.1e-22
Identity = 72/217 (33.18%), Postives = 121/217 (55.76%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLY 79
           TP   ++ L++AW NEK APE+L  ++ +V  + EQ++ ME+ ++   R+    L VS++
Sbjct: 22  TPAELIDRLEQAWMNEKFAPELLENKSEIVECVMEQLEHMEENLK---RAKKGDLKVSIH 81

Query: 80  QMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRR-----LSEEEITFTDRCSHDMK 139
           QM+++R +F+L SY+R RL KIEK+  + L+ ++  R      LS EE+ F      + +
Sbjct: 82  QMEMERIRFVLSSYLRCRLMKIEKFFPHTLEKEKTRREEEPPILSPEELVFAKEFLANTE 141

Query: 140 KHFDESVLSKLPNNYQ--DILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEE 199
            +  ++ L  +P N Q  D+LR          VP+P LD +V  + KE  E+I +E E +
Sbjct: 142 TYLKDTALKHMPPNLQKVDLLR---------TVPKPDLDAYVFLRVKERQENILVEPEND 201

Query: 200 RASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
                V    ++E    H++RY+ +  LV SG I L+
Sbjct: 202 EQRDYV---IDLEEGSQHLMRYRTVAPLVASGAIQLI 223

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BLAST of Carg20989 vs. Swiss-Prot
Match: sp|Q9BRT9|SLD5_HUMAN (DNA replication complex GINS protein SLD5 OS=Homo sapiens OX=9606 GN=GINS4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 2.3e-21
Identity = 70/217 (32.26%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 20  TPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLY 79
           TP   +E L++AW NEK APE+L  +  +V  + EQ++ ME+ +    R   + L VS++
Sbjct: 22  TPAELIERLEQAWMNEKFAPELLESKPEIVECVMEQLEHMEENLRRAKR---EDLKVSIH 81

Query: 80  QMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELF-----RRLSEEEITFTDRCSHDMK 139
           QM+++R +++L SY+R RL KIEK+  ++L+ ++         LS EE+ F      + +
Sbjct: 82  QMEMERIRYVLSSYLRCRLMKIEKFFPHVLEKEKTRPEGEPSSLSPEELAFAREFMANTE 141

Query: 140 KHFDESVLSKLPNNYQ--DILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEE 199
            +     L  +P N Q  D+ R          VP+P LD++V  + +E  E+I +E + +
Sbjct: 142 SYLKNVALKHMPPNLQKVDLFR---------AVPKPDLDSYVFLRVRERQENILVEPDTD 201

Query: 200 RASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
                V    ++E    H+IRYK I  LV SG + L+
Sbjct: 202 EQRDYV---IDLEKGSQHLIRYKTIAPLVASGAVQLI 223

[Close]

BLAST of Carg20989 vs. Swiss-Prot
Match: sp|Q55EA2|SLD5_DICDI (DNA replication complex GINS protein SLD5 OS=Dictyostelium discoideum OX=44689 GN=gins4 PE=3 SV=2)

HSP 1 Score: 91.7 bits (226), Expect = 1.2e-17
Identity = 57/210 (27.14%), Postives = 116/210 (55.24%), Query Frame = 0


Query: 25  VEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEYSRSGIDPLIVSLYQMDLD 84
           ++ LK+AW NEK AP +L +E  ++  + E+I+  E        +       ++Y+M+++
Sbjct: 20  LDKLKKAWINEKYAPNLLNYEDVIIKEVMEKIEEKESLCASAISNINLQFTANIYEMEIE 79

Query: 85  RTQFLLRSYIRIRLQKIEKY---MLYILKSDEL--FRRLSEEEITFTDRCSHDMKKHFDE 144
           R +++++ Y+  R++KI+K+   +L  +++DE   ++ LSE EI +  +    M  +F  
Sbjct: 80  RLKYIIKCYLVQRIKKIDKFYSSILLEIENDEYDSYKLLSEFEINYCQKYKALMDGYFKN 139

Query: 145 SVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQLEDEEERASSRVE 204
           ++L+ +P ++Q +        + + +  P L+TFV CK +E L    ++D          
Sbjct: 140 TLLNSIPKDFQKM--------DSNSINRPFLNTFVFCKPREDLGDFLVDD---------- 199

Query: 205 EPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           E  + +   ++ ++Y PIKSLVE G++DL+
Sbjct: 200 ETIDFKKTSIYFLKYLPIKSLVEGGKMDLI 211

[Close]

BLAST of Carg20989 vs. TrEMBL
Match: tr|A0A1S3AVG5|A0A1S3AVG5_CUCME (DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC103483259 PE=3 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 4.5e-115
Identity = 215/229 (93.89%), Postives = 224/229 (97.82%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           D+IEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELFRRLS+
Sbjct: 61  DSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELFRRLSK 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQD+L+QSI SEEDDMVPEPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Carg20989 vs. TrEMBL
Match: tr|A0A0A0L8W0|A0A0A0L8W0_CUCSA (DNA replication complex GINS protein SLD5 OS=Cucumis sativus OX=3659 GN=Csa_3G121760 PE=3 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 7.6e-115
Identity = 216/229 (94.32%), Postives = 222/229 (96.94%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MAS+LGGAS+SQTDDFETFTPTTDVEPLKRAWRNEKAAPEILP+EASLVGRIKEQIQ ME
Sbjct: 1   MASNLGGASISQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPYEASLVGRIKEQIQAME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           DTIEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF RLS 
Sbjct: 61  DTIEEYSRSGIDPLIVSLYQMDLDRVQFLLRSYIRSRLQKIEKYMLYILKSDELFGRLSR 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           EEITFTDRC HDMKKHFDESVLSKLPNNYQDIL+QSI SEEDDMVPEPPLDTFVVCKSKE
Sbjct: 121 EEITFTDRCRHDMKKHFDESVLSKLPNNYQDILKQSITSEEDDMVPEPPLDTFVVCKSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 181 YLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 229

[Close]

BLAST of Carg20989 vs. TrEMBL
Match: tr|A0A1S4DSZ1|A0A1S4DSZ1_CUCME (DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC103483259 PE=3 SV=1)

HSP 1 Score: 315.1 bits (806), Expect = 1.3e-82
Identity = 161/174 (92.53%), Postives = 167/174 (95.98%), Query Frame = 0


Query: 56  IQLMEDTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELF 115
           I   ED+IEEYSRSGIDPLIVSLYQMDLDR QFLLRSYIR RLQKIEKYMLYILKSDELF
Sbjct: 28  IHSQEDSIEEYSRSGIDPLIVSLYQMDLDRIQFLLRSYIRSRLQKIEKYMLYILKSDELF 87

Query: 116 RRLSEEEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVV 175
           RRLS+EEITFTDRC HDMKKHFDESVLSKLPNNYQD+L+QSI SEEDDMVPEPPLDTFVV
Sbjct: 88  RRLSKEEITFTDRCRHDMKKHFDESVLSKLPNNYQDVLKQSITSEEDDMVPEPPLDTFVV 147

Query: 176 CKSKEYLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           CKSKEYLEHIQLEDEEERASSR+EEPFEMEANVLHIIRY+PIKSLVESGRIDLL
Sbjct: 148 CKSKEYLEHIQLEDEEERASSRIEEPFEMEANVLHIIRYRPIKSLVESGRIDLL 201

[Close]

BLAST of Carg20989 vs. TrEMBL
Match: tr|W9S410|W9S410_9ROSA (DNA replication complex GINS protein SLD5 OS=Morus notabilis OX=981085 GN=L484_009270 PE=3 SV=1)

HSP 1 Score: 293.1 bits (749), Expect = 5.4e-76
Identity = 151/228 (66.23%), Postives = 183/228 (80.26%), Query Frame = 0


Query: 7   GASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLMEDTIEEY 66
           G++V + DD+E+   TTDVE LKR WR EKAAPEI  FE++L+GRIKEQIQL E+T+EE+
Sbjct: 8   GSTVPKMDDYESLISTTDVEHLKRVWRREKAAPEIFQFESALIGRIKEQIQLTEETVEEF 67

Query: 67  SRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSEEEITFT 126
             +  DPL VSLYQMDLDRTQFLLRSY+RIRLQKIEKYM +ILK DELF RLS+EE +F 
Sbjct: 68  VEAKTDPLTVSLYQMDLDRTQFLLRSYLRIRLQKIEKYMFHILKMDELFNRLSKEEKSFA 127

Query: 127 DRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKEYLEHIQ 186
           +RC  D+K H ++ VLS+LP+NYQ IL+QSIISEE DMVP+P LDTFVVCK+K YL HIQ
Sbjct: 128 ERCCDDLKMHLEDCVLSRLPDNYQSILKQSIISEETDMVPKPQLDTFVVCKTKYYLGHIQ 187

Query: 187 LED-----EEERASSR-VEEPFEMEANVLHIIRYKPIKSLVESGRIDL 229
           LED      ++R + R +EEPFEME NVL+ +RYKPIK  VE G+IDL
Sbjct: 188 LEDGDNGNPDDRGNQRHLEEPFEMEPNVLYFVRYKPIKKFVEEGKIDL 235

[Close]

BLAST of Carg20989 vs. TrEMBL
Match: tr|V7ASF9|V7ASF9_PHAVU (DNA replication complex GINS protein SLD5 OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G140100g PE=3 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 2.3e-71
Identity = 149/229 (65.07%), Postives = 180/229 (78.60%), Query Frame = 0


Query: 1   MASSLGGASVSQTDDFETFTPTTDVEPLKRAWRNEKAAPEILPFEASLVGRIKEQIQLME 60
           MASS  GA  +  DD+++   TTDVE LKRAWRNEKAAPEIL FE  L+ R+KEQIQLME
Sbjct: 1   MASS-SGAEGASLDDYDSLIATTDVELLKRAWRNEKAAPEILRFEFHLISRVKEQIQLME 60

Query: 61  DTIEEYSRSGIDPLIVSLYQMDLDRTQFLLRSYIRIRLQKIEKYMLYILKSDELFRRLSE 120
           +T+EE S  G +PL VSLYQMDLDRT FLLRSY+RIR+QKIEKYM +ILK++EL+ RLS+
Sbjct: 61  ETVEEKSSGGNNPLSVSLYQMDLDRTLFLLRSYLRIRIQKIEKYMFHILKTEELWNRLSK 120

Query: 121 EEITFTDRCSHDMKKHFDESVLSKLPNNYQDILRQSIISEEDDMVPEPPLDTFVVCKSKE 180
           +E  F   C+ D+ +H +E+VLSKLP NYQ +L+QS+ISEEDDMVPEP LDTFV+C+SKE
Sbjct: 121 DEKDFARTCTGDLNRHLEETVLSKLPENYQSVLKQSVISEEDDMVPEPELDTFVLCRSKE 180

Query: 181 YLEHIQLEDEEERASSRVEEPFEMEANVLHIIRYKPIKSLVESGRIDLL 230
           YL  IQLED      S++   FEME  VLH I YK IK+LVESG+IDLL
Sbjct: 181 YLTGIQLEDGPADDRSKL---FEMEPGVLHFICYKSIKALVESGKIDLL 225

The following BLAST results are available for this feature:

BLAST of Carg20989 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022924491.1	1.1e-120	100.00	DNA replication complex GINS protein SLD5 [Cucurbita moschata] >XP_022924492.1 D...	[more]
XP_008438015.1	6.8e-115	93.89	PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis melo] >...	[more]
XP_004134322.2	1.2e-114	94.32	PREDICTED: DNA replication complex GINS protein SLD5 isoform X1 [Cucumis sativus...	[more]
XP_022147485.1	1.0e-110	91.70	DNA replication complex GINS protein SLD5 [Momordica charantia]	[more]
XP_016899073.1	2.0e-82	92.53	PREDICTED: DNA replication complex GINS protein SLD5 isoform X2 [Cucumis melo]	[more]

BLAST of Carg20989 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G49010.1	2.4e-66	59.03	DNA replication protein-related	[more]

BLAST of Carg20989 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q99LZ3\|SLD5_MOUSE	6.4e-24	35.02	DNA replication complex GINS protein SLD5 OS=Mus musculus OX=10090 GN=Gins4 PE=1...	[more]
sp\|Q499W2\|SLD5_RAT	7.1e-23	32.76	DNA replication complex GINS protein SLD5 OS=Rattus norvegicus OX=10116 GN=Gins4...	[more]
sp\|A2VE40\|SLD5_BOVIN	2.1e-22	33.18	DNA replication complex GINS protein SLD5 OS=Bos taurus OX=9913 GN=GINS4 PE=2 SV...	[more]
sp\|Q9BRT9\|SLD5_HUMAN	2.3e-21	32.26	DNA replication complex GINS protein SLD5 OS=Homo sapiens OX=9606 GN=GINS4 PE=1 ...	[more]
sp\|Q55EA2\|SLD5_DICDI	1.2e-17	27.14	DNA replication complex GINS protein SLD5 OS=Dictyostelium discoideum OX=44689 G...	[more]

BLAST of Carg20989 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVG5\|A0A1S3AVG5_CUCME	4.5e-115	93.89	DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC10348325...	[more]
tr\|A0A0A0L8W0\|A0A0A0L8W0_CUCSA	7.6e-115	94.32	DNA replication complex GINS protein SLD5 OS=Cucumis sativus OX=3659 GN=Csa_3G12...	[more]
tr\|A0A1S4DSZ1\|A0A1S4DSZ1_CUCME	1.3e-82	92.53	DNA replication complex GINS protein SLD5 OS=Cucumis melo OX=3656 GN=LOC10348325...	[more]
tr\|W9S410\|W9S410_9ROSA	5.4e-76	66.23	DNA replication complex GINS protein SLD5 OS=Morus notabilis OX=981085 GN=L484_0...	[more]
tr\|V7ASF9\|V7ASF9_PHAVU	2.3e-71	65.07	DNA replication complex GINS protein SLD5 OS=Phaseolus vulgaris OX=3885 GN=PHAVU...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0006261	DNA-dependent DNA replication

Vocabulary: **INTERPRO**
Term	Definition
IPR036224	GINS_bundle-like_dom_sf
IPR038749	Sld5_GINS_A
IPR008591	GINS_Sld5
IPR021151	GINS_A
IPR031633	SLD5_C

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006261	DNA-dependent DNA replication
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20989-RA	Carg20989-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 49..69
None	No IPR available	GENE3D	G3DSA:1.20.58.1030		coord: 11..219 e-value: 3.1E-58 score: 198.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
None	No IPR available	SUPERFAMILY	SSF160059	PriA/YqbF domain	coord: 170..229
IPR031633	DNA replication complex GINS protein SLD5, C-terminal	PFAM	PF16922	SLD5_C	coord: 168..229 e-value: 7.7E-14 score: 51.5
IPR021151	GINS subunit, domain A	PFAM	PF05916	Sld5	coord: 75..123 e-value: 8.5E-6 score: 26.1
IPR008591	GINS complex subunit Sld5	PIRSF	PIRSF007764	GINS_Sld5	coord: 1..229 e-value: 2.8E-61 score: 205.1
IPR008591	GINS complex subunit Sld5	PANTHER	PTHR21206	SLD5 PROTEIN	coord: 22..229
IPR038749	GINS complex protein Sld5, alpha-helical domain	CDD	cd11711	GINS_A_Sld5	coord: 24..142 e-value: 3.28305E-45 score: 148.142
IPR036224	GINS, helical bundle-like domain superfamily	SUPERFAMILY	SSF158573	GINS helical bundle-like	coord: 20..154

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20989	Cla021224	Watermelon (97103) v1	carwmB0487
Carg20989	Csa3G121760	Cucumber (Chinese Long) v2	carcuB0522
Carg20989	MELO3C006096	Melon (DHL92) v3.5.1	carmeB0497
Carg20989	ClCG05G001400	Watermelon (Charleston Gray)	carwcgB0474
Carg20989	CSPI03G08650	Wild cucumber (PI 183967)	carcpiB0529
Carg20989	Cucsa.258510	Cucumber (Gy14) v1	carcgyB0564
Carg20989	CmaCh14G020490	Cucurbita maxima (Rimu)	carcmaB0683
Carg20989	CmoCh14G021130	Cucurbita moschata (Rifu)	carcmoB0664
Carg20989	Lsi05G020520	Bottle gourd (USVL1VR-Ls)	carlsiB445
Carg20989	Cp4.1LG03g16700	Cucurbita pepo (Zucchini)	carcpeB0691
Carg20989	CsGy3G008730	Cucumber (Gy14) v2	carcgybB0499
Carg20989	MELO3C006096.2	Melon (DHL92) v3.6.1	carmedB0503
Carg20989	CsaV3_3G008790	Cucumber (Chinese Long) v3	carcucB0528
Carg20989	Cla97C05G081760	Watermelon (97103) v2	carwmbB0513

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20989	Carg24657	Silver-seed gourd	carcarB409

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20989	Wax gourd	carwgoB0594
Carg20989	Cucumber (Gy14) v1	carcgyB0563
Carg20989	Cucurbita maxima (Rimu)	carcmaB0684
Carg20989	Cucurbita moschata (Rifu)	carcmoB0665
Carg20989	Cucurbita moschata (Rifu)	carcmoB0666
Carg20989	Cucurbita pepo (Zucchini)	carcpeB0692
Carg20989	Cucurbita pepo (Zucchini)	carcpeB0690
Carg20989	Cucurbita pepo (Zucchini)	carcpeB0693
Carg20989	Wild cucumber (PI 183967)	carcpiB0530
Carg20989	Bottle gourd (USVL1VR-Ls)	carlsiB444
Carg20989	Melon (DHL92) v3.5.1	carmeB0496
Carg20989	Melon (DHL92) v3.5.1	carmeB0498
Carg20989	Melon (DHL92) v3.6.1	carmedB0502
Carg20989	Watermelon (Charleston Gray)	carwcgB0475
Carg20989	Watermelon (Charleston Gray)	carwcgB0476
Carg20989	Watermelon (97103) v1	carwmB0488