Carg20946 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAAGCGACCTGTACAATGCCAAAAAGGAACTGGCCAGTTATGTTGGCCCTCAAGCAATGATTCCAATTCTTCAGCCTTCCACTGCCATTATGACCACTAACCCTCAAGGACCCGTCACTAGCCCTTCCTCCTCCGTCCTACTTCCTTACAATATGTCCCCCATGTTTGGGATTCCCTCTTCTGGCGGCGGTGGCTCCTCCCAACAGATGCTCATTCGTGAGTCGCCCCATCAACAACAACAACATCAACACCAGATACAGCAGCAGCAGCAGCAGTTGTTTGAGGCTCAGCAATTGGCTGCGGCAGTAGCGGCCAGAGAGCAGCAAGAAATGTTCAGAGCGTACGAGCAGAAGCAAACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCATTCTCCTTCCCAACGCCAACACGAGCTCTTGAGGTTCAATGGGTTTGACCCGGCTGGTGTTGGTGCCGGTGCCGGTGCTGGTGGGTTTAATAATCAGATGAATTCGCCTTCAGATTTGACATTGGGAACTTTTCCCGACAATAGCTACCAAATTCAAACGCAACCAGAACACTCCCATTCCCATTCCCATTCCCACCATCATCATCCGCTTCAAGTACAGCTATTTCCTCAACCTCAGCAAACTCAGCTTGACCAATCACAGCAACAGCAGCAGCAGCCCCATCCACACCGATCGCAGCAAATCCACAAGCCTGAAGCTACTGCAGATGATGGTAGGAATATTAACATTGGACCCTCTTGTTGA ATGCAAAGCGACCTGTACAATGCCAAAAAGGAACTGGCCAGTTATGTTGGCCCTCAAGCAATGATTCCAATTCTTCAGCCTTCCACTGCCATTATGACCACTAACCCTCAAGGACCCGTCACTAGCCCTTCCTCCTCCGTCCTACTTCCTTACAATATGTCCCCCATGTTTGGGATTCCCTCTTCTGGCGGCGGTGGCTCCTCCCAACAGATGCTCATTCGTGAGTCGCCCCATCAACAACAACAACATCAACACCAGATACAGCAGCAGCAGCAGCAGTTGTTTGAGGCTCAGCAATTGGCTGCGGCAGTAGCGGCCAGAGAGCAGCAAGAAATGTTCAGAGCGTACGAGCAGAAGCAAACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCATTCTCCTTCCCAACGCCAACACGAGCTCTTGAGGTTCAATGGGTTTGACCCGGCTGGTGTTGGTGCCGGTGCCGGTGCTGGTGGGTTTAATAATCAGATGAATTCGCCTTCAGATTTGACATTGGGAACTTTTCCCGACAATAGCTACCAAATTCAAACGCAACCAGAACACTCCCATTCCCATTCCCATTCCCACCATCATCATCCGCTTCAAGTACAGCTATTTCCTCAACCTCAGCAAACTCAGCTTGACCAATCACAGCAACAGCAGCAGCAGCCCCATCCACACCGATCGCAGCAAATCCACAAGCCTGAAGCTACTGCAGATGATGGTAGGAATATTAACATTGGACCCTCTTGTTGA ATGCAAAGCGACCTGTACAATGCCAAAAAGGAACTGGCCAGTTATGTTGGCCCTCAAGCAATGATTCCAATTCTTCAGCCTTCCACTGCCATTATGACCACTAACCCTCAAGGACCCGTCACTAGCCCTTCCTCCTCCGTCCTACTTCCTTACAATATGTCCCCCATGTTTGGGATTCCCTCTTCTGGCGGCGGTGGCTCCTCCCAACAGATGCTCATTCGTGAGTCGCCCCATCAACAACAACAACATCAACACCAGATACAGCAGCAGCAGCAGCAGTTGTTTGAGGCTCAGCAATTGGCTGCGGCAGTAGCGGCCAGAGAGCAGCAAGAAATGTTCAGAGCGTACGAGCAGAAGCAAACCCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAACAGCATTCTCCTTCCCAACGCCAACACGAGCTCTTGAGGTTCAATGGGTTTGACCCGGCTGGTGTTGGTGCCGGTGCCGGTGCTGGTGGGTTTAATAATCAGATGAATTCGCCTTCAGATTTGACATTGGGAACTTTTCCCGACAATAGCTACCAAATTCAAACGCAACCAGAACACTCCCATTCCCATTCCCATTCCCACCATCATCATCCGCTTCAAGTACAGCTATTTCCTCAACCTCAGCAAACTCAGCTTGACCAATCACAGCAACAGCAGCAGCAGCCCCATCCACACCGATCGCAGCAAATCCACAAGCCTGAAGCTACTGCAGATGATGGTAGGAATATTAACATTGGACCCTCTTGTTGA MQSDLYNAKKELASYVGPQAMIPILQPSTAIMTTNPQGPVTSPSSSVLLPYNMSPMFGIPSSGGGGSSQQMLIRESPHQQQQHQHQIQQQQQQLFEAQQLAAAVAAREQQEMFRAYEQKQTQQQQQQQQQQQQHSPSQRQHELLRFNGFDPAGVGAGAGAGGFNNQMNSPSDLTLGTFPDNSYQIQTQPEHSHSHSHSHHHHPLQVQLFPQPQQTQLDQSQQQQQQPHPHRSQQIHKPEATADDGRNINIGPSC
BLAST of Carg20946 vs. NCBI nr
Match: XP_022927995.1 (LOB domain-containing protein 36-like [Cucurbita moschata]) HSP 1 Score: 131.7 bits (330), Expect = 3.5e-27 Identity = 253/256 (98.83%), Postives = 253/256 (98.83%), Query Frame = 0
BLAST of Carg20946 vs. NCBI nr
Match: XP_022971742.1 (LOB domain-containing protein 36-like [Cucurbita maxima] >XP_022971743.1 LOB domain-containing protein 36-like [Cucurbita maxima]) HSP 1 Score: 127.1 bits (318), Expect = 8.5e-26 Identity = 247/258 (95.74%), Postives = 248/258 (96.12%), Query Frame = 0
BLAST of Carg20946 vs. NCBI nr
Match: XP_023513194.1 (LOB domain-containing protein 36-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 121.3 bits (303), Expect = 4.7e-24 Identity = 61/61 (100.00%), Postives = 61/61 (100.00%), Query Frame = 0
BLAST of Carg20946 vs. NCBI nr
Match: XP_015890048.1 (LOB domain-containing protein 36-like [Ziziphus jujuba] >XP_015868740.1 LOB domain-containing protein 36-like [Ziziphus jujuba]) HSP 1 Score: 73.9 bits (180), Expect = 8.6e-10 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 0
BLAST of Carg20946 vs. NCBI nr
Match: XP_018856691.1 (PREDICTED: LOB domain-containing protein 36-like [Juglans regia]) HSP 1 Score: 71.6 bits (174), Expect = 4.2e-09 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of Carg20946 vs. TAIR10
Match: AT5G66870.1 (ASYMMETRIC LEAVES 2-like 1) HSP 1 Score: 45.8 bits (107), Expect = 4.5e-05 Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Carg20946 vs. Swiss-Prot
Match: sp|Q9FKZ3|LBD36_ARATH (LOB domain-containing protein 36 OS=Arabidopsis thaliana OX=3702 GN=LBD36 PE=2 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 8.2e-04 Identity = 24/34 (70.59%), Postives = 27/34 (79.41%), Query Frame = 0
BLAST of Carg20946 vs. TrEMBL
Match: tr|A0A2I4HKK4|A0A2I4HKK4_9ROSI (LOB domain-containing protein 36-like OS=Juglans regia OX=51240 GN=LOC109018950 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 2.8e-09 Identity = 39/61 (63.93%), Postives = 48/61 (78.69%), Query Frame = 0
BLAST of Carg20946 vs. TrEMBL
Match: tr|M5W6J8|M5W6J8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G137900 PE=4 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 3.1e-08 Identity = 36/61 (59.02%), Postives = 44/61 (72.13%), Query Frame = 0
BLAST of Carg20946 vs. TrEMBL
Match: tr|A0A2P4MRQ3|A0A2P4MRQ3_QUESU (Lob domain-containing protein 36 OS=Quercus suber OX=58331 GN=CFP56_35987 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08 Identity = 40/63 (63.49%), Postives = 48/63 (76.19%), Query Frame = 0
BLAST of Carg20946 vs. TrEMBL
Match: tr|A0A2R6R6B4|A0A2R6R6B4_ACTCH (LOB domain-containing protein OS=Actinidia chinensis var. chinensis OX=1590841 GN=CEY00_Acc10608 PE=4 SV=1) HSP 1 Score: 67.8 bits (164), Expect = 4.1e-08 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 0
BLAST of Carg20946 vs. TrEMBL
Match: tr|A0A2N9FMU2|A0A2N9FMU2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19988 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 5.3e-08 Identity = 34/61 (55.74%), Postives = 45/61 (73.77%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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