Carg20924 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTATCTTTTCTCACAACTTCATATGATATTCACGTGTTAATATATGTATTTTACTTTACAGGAAGAAAAAGTTGACAGATCACTGGAAAAAGTTTATAAGTCCTGTGACGTGGCGGTGTCGATGGTTAGAATTGAAAATTAGGAAACTTCAGTCTCAATCGTCTAAATATGATAGGGAACTTGCATTATATGATCAAAGAAAGCAGTCTGTCTATGAGCAATTCTCAACGGAAGATTTTGATGTGAAGTCAACAGGATTCTCAAGTCACACTCAAAGAGACAGAATAATGAAAAGAAAGAAAAGGAAGAAAAATGAAGAGACAACTGAAGTAGCTTCATATATGGCACATCACAATTTGTTTTCATATTATGGTATCAAGTCCTCAACTATTTCTATGCTAGTCCTTTTTTCCTAGTGTCTCCCTCTATGACATTGTAGTATTCTTTTGTTATTCCAGAGAAGAAGGGGTCTGTCGCTGACGACATATCTTCAGAAGGTACTTCTCTTAAATTAAGTAAGTGAAGTTATTATTTCGGTTGATATCATTAAATTGTACATTGTTGAATAGGATTTTGCGGTGGATTAATAATAAATGGAGGAGTGAAAGCGATTTTAAGTCTTTGACTGTTAGATGAATTAGCTCTACACTTGATATTTGATTATTAAAAATTTATGTTTATCTTCATTTCTTTTTTTTTTTTTAAAGGTATGTGATATTGTTATCCTTTTTCTTTTCTCCATATGTGGGTTTGACGTTTGATCCGAATGAACCTACAATCTTTATGGAGATGCTTCCAAGAGAGATAACAAAACTTAGAACCTCCCAATTATTTTCCTTCTCTTAGATGATAGTTTTAACAATATTGAGCCATAAAATCAGCTTTTCTTTTTCTAGGATCGCCAGAAAGAATCTCAATACATAAATTTTTTGGCGTTTCTAGGGTGTTAGGATGGACTAGGTGGGTTTCGGGGTGAACTAGTGTTAGGGATATTAGTAGGGAAATATTAAGAATATTAATAGGATATTAGGAAGGCATTTTTGTATCATCGGGAGATGGTTTATGAAAGGTATTGAAAGTTTGGAGGTAGAGAGAAATCGGAGTATAGTTATTTTTGGAGGCTCCACATCTTTTCTTTTATCATTTCTATACTAACTTTCTACGAATTTCCACTGCAAAATTAGTTCCTACCTATCATGTTGGAAACCATTTCCAAGCCAAAGATATTAAAATTAAGCCTTCATAGATCAAGAGAATAAGAACATCATAAGAAAGTGATGTGATGCCTTACAAAGGAGACCTGCTTAGAGAGGATCAGCCCAGCAAGATGCTGAAATTATAACGTCTTCATAAGACTTCATGATAAGACTGACTTAACAATATTTACAGACCATGCTGCTAATAGAAAAGAAACTCATGCAAAGACCTGACTGTCAATCTGTCAAAGCCTATTTTGGAGATCTTTAATATGAGAGTGATGCCTTTTTTTCCTTTTTTTTTTTTTTTTTTTTTTCCTGAGGCAGTACCAACTTTCATTGAGAAAAATGAAAGAATACCTGCGCATAAAGCCCATAAAAGGAAGTCCCATTAAAGAAGGGGACTCCAATCCAGTAAGATAAGTTAAAGAGTAATTACAAAAAAGCTATTAGGTACCCAAATATGTAGAAAAAGACGAGATAATTTTGCAATATCGAAGAGAAACTGCAATATAACAATACCTTTTGAGAAGACTATCTCTCTCCCAAGTCCCAGAACGGACGCTCCACCAAAATGCTCTGCACCTTTTAAGGTCCCCAACACTCCTATTTATAACCAAGACACCCTTAACTAATTGCCACTATGCCTAACATGCTACTAAATCTCCATATATATTCCATAGCATACCATACTAGTACTCTCACAAAAGTTTCGTCACTAATGCCCAAAGAAACATTTAACCTCACAAAGGACCACGCCTTAGAATGGTTCCGTTCAACTCCTCGAAAGATTCTATTTTTCTCTCACCCAAATCCCCATATCAAGGCGCACAACCCAACTTGCCACGAAAACCTTCCCTTCTCACGAAAATCCAGATGGAAAAGGACTCCTCAAATCATCACCCTACCTATCTGCTGGCACACTGAAAACCAAACACCTAAAAAATATCTCTAACGGACAGGATGAAATCACATCTCCACTTGATACATCCACGTCTTCTTAAGCCTTCTAACAAATTATGCAACACAACAGACCAACCAATTAAGATATCTTCCTTATATATCTATCAAGGGTATTCACTCTTCCAGGGATAACTTGTTAGATGAAGAATTTAATCTTTTATGGAACTTTAACTTTCCACAAATGAAAAAAAAAAAAAAAAAAAAAAAAAAGACTCGTGAGGAGGAGAGAGATTCAACAACCAATGAAAGAACAAGCTACAAGAAAAGCCCTTAGACGTGCTAAGACTCCATAAATGAAAATCCCTCCTCCTAGGCATAAACTCTAACTCTTCAATGAAAGAAAGGAGAGTTAGAACCTCTGTCGTCTCCCTATCAAACAATGCATGATGCAACCCAAACAAAAAGAAAGAGATCTCCCAGAAAAACGCAAAACATTAGCCACAATGCGACCTTTCAGAGAAGATAAATGATATAAACAAGGAAGCGTAGAGCGGAGGGGAAGATAAATGATATGACAGTGATGTATATTTTCTGGAATATATGTAACCATCCAACGGATTTTCCAATTTTATTGGTAGCTGATATACATCTATTGCACTTGGGTTTTGGAAGAAGCATCTTATGCCACATACATGTCACTCTGGAAATATTCTATTTCTAGATAGATTGTTAGGTGGAATCTATGTGGATAATGAGGAAGTTCTAGATTAGGAAACTAGGCATAACTACTGCTTTTGGGTGGCCATTAACCTGCATAGGTAGCCTTCGGAGGGGAGGCTATATCATGGACCATGGTAGAAATTGGAAACTCATGTACCATGGTAGAAAGGAACCTGACAAGCTAGCTAGATAGAAAAATATGGCTCCCTCTAGAGGAGGCTATATCACTTTGTTACAATCAAGCCTTATCAGCATACCAATAATAATTTTTTATCCCTTTCCTAGATTTTTGAGTATGGTTGTCAATATTATTGAAGGGAAAATGTGAAAGTGGCACGCTGCTCTCTGCATTGACGTAGGCTGCTTGAGCTTGAGAAACCTAAGCGAGAATATTCTTGCTTTCTTAATGAACGTGTTGATCTTAATACAAACTGGATTCCTTACGGCTCTGTTATAGCTAGCAAATTATGAAGTCGATGGATTTTCTGGTTTTCTGCTATTAATAATGGGATTAGCGGAAGAGGTTGGACGTTCCTAAAAGTTTATGTTGGATGATGGATGATGTACTGTTTTTTGGGAGATTTGTGGATTACTAATCAGCCCTTGAAAACATGGTCCCCAGATTTTTTATCAAAAAAAAAAAAGGTATAGTCCCCAGATTCTTCAAACTGGCTAGTTTGAAAACCTTTTTCATAAAAGATTCTTGGAATCCTATAAGAAGGGGGATGAAGTCTTTTATTTAGAATGACTTAAATTGAAATAGAATTGGAGGAGTACGAATAGGCAATCTTGGTGAGTATTCTTGATGGTTGTTAACTTAACCAACAGAGACATACCATCTTATGGACAAGTCTCGTAATTATTCCTGTAAATCATTTGCTGCCCATCTTACTAAAAATTGTGAAACCTTTGTAAACCTTTTTAAGGACTATTTGGAAGAAAATTTACAGAAAATTCAAGGTTATTCTTTGGTCCCTAGTTTTCAGGGGGTTAACCGTTACGGGCATGGTGCAATTAAGACATCCTTACATGCTAGGTATTATCTCTGCTAACAGAATTTGGAAGACCTAGACCTCGTCTTTCTCCACTACTCTATACTTCCAAATGCTGGGGTTAGAATATGTTGGATGTGTAGTCTCTCCTTATCTTACCGAAAAATGTTAAAGATTTTGTTGGAAACCTGGACAGTCATTTTGTGGGCATCCCTGGAGACAAAAACCTAAAACCGTTTCAAAATGTGAATTCTGATGACATTTCTATGAGAAGTGGTTGGAAAGATACGAAAGAACTATCCAAAAGTTTCAATCTTAGCTGGGTCTTTCCCATTAATAATTTATTGTCCCTTTCCAAGATCCTTTGCTACAATGTGGTGGTGGCCTTCTTTTGGAGACATTTGACGGAAACAACATGATTTTTCAAGGGGAACACTCACCTCGCTACTTGGTGTTCTCTTTACAAAGAGTTTATAGAGCTTTGTAATTGTGGTTTGATGCATATTTCTGCCCATTGAGAGCCCTTTTTTTAAATCCCCTTGGCTTTATTGGGACATCTCCTCTATTTTTTGTACATGGTCAATTATATCATTTTGTTTTGAAACGAATCCAATGTTTGTAACGACACTTTTGACTTATTCGTGCTTCACAACAACACTTTTGAGCTTCTTGTAACCGTGCCTTCTTTATTTATGCTAATTAGAGTAATCTTCATGATCATGTCCGGTACTTTTTTTACCCTTATTTTGAGTTTCCATTGTTATAGATGTTCTTAATAAACAAATAAGCCTGTATCTCATAGTTAAAAGAATAGCCCATTGGAAGTTTGAAAAGACAGTATATGTACGGAGAGCTCTTGGTAACAGTAGTCAGTTTGATTCTCTGCTCTGTTCTGTACAGACAAGACAAAGAATTTGAGACATGATGGCATCAATGACTTCCGGACAATTGCAACTGACGGATGGCCATCTTCTATGTTAGGAGATAATGATAATAATTTGGAAGAGATGTTTCTAAAAATTGAAGCTGCGCAGTCAAGAGTTCATGAGTTGAAGAACAGAATTGACAAGGTGGTGAATGAAAATCCCATGAAGTTTTCTTCAATCAATCAGATATACATGCTTGCATCAAGTGACGATCCCGCTTCACCTGAAGATGGAAATGATGTGTTCGTTAGGTCTTTGCATGAAGCATCACAACACATGTCTGAGGACGCATTTGATGTTCTTATGCCTGAAAATGCAATTACGAGTCATGGAGAGGTCATGCTACTTCCTGATATGATTCAGAATGCGGATTGTGGAAGAAGTGTAAGTTTCCTCTACTACATTGCAATATATCACCCAATATATGAAACTCTTTGGTTTCATTCCAATCAAAGTTAAGAAATAATGGCTTTGCCTACATCAACTTGCAACAAATATGATCTTTGATAAGTACAGACCGAGGGACTAATACTGAGCTGAAGTTTTATATCGGTCACCACCTTATATGGACTTGCAACATGGTAGCTCTAAACATGGAATTCACTTGTATGTTTGCAGACTAAGAAAGTTCTGGTGCAAGATTCTGCAGCCAAGGAAGAGGCGCAAATTCATGAAGAGGTTAATGGTCAGTTTATTGAGCAGACTCTGAAATTGGAGGAGCAAATCACTTCTCCAGCTGACTTAGCCTCAGGAATCCAGGAGCCTGACATGCAACACAAGACAGAAACCCCTTCTGCTGCCAAACCTAGTTCATCTAAGAAAACTAGAAAGCGGGGAAGGCGAAAATTCGGGATGAGGAAACAGAAACGTAAAGTGACAGGTTAGCTGGATGAATGGGACTAGCAGATGGTTGTTTTGCTTCTTATTTGGTCGATGGAGGTTAGAATTTTGTTAGTGGTTATTGTTCTTCTTCTACTGTATATTTTCCATGCCATGCTCCTCCCCCCTCTCACCTGCACAGATCAACTCAATCATTTGTATATGCTGCA ATGTTATCTTTTCTCACAACTTCATATGATATTCACGTGAAGAAAAAGTTGACAGATCACTGGAAAAAGTTTATAAGTCCTGTGACGTGGCGGTGTCGATGGTTAGAATTGAAAATTAGGAAACTTCAGTCTCAATCGTCTAAATATGATAGGGAACTTGCATTATATGATCAAAGAAAGCAGTCTGTCTATGAGCAATTCTCAACGGAAGATTTTGATGTGAAGTCAACAGGATTCTCAAGTCACACTCAAAGAGACAGAATAATGAAAAGAAAGAAAAGGAAGAAAAATGAAGAGACAACTGAAGTAGCTTCATATATGGCACATCACAATTTGTTTTCATATTATGACAAGACAAAGAATTTGAGACATGATGGCATCAATGACTTCCGGACAATTGCAACTGACGGATGGCCATCTTCTATGTTAGGAGATAATGATAATAATTTGGAAGAGATGTTTCTAAAAATTGAAGCTGCGCAGTCAAGAGTTCATGAGTTGAAGAACAGAATTGACAAGGTGGTGAATGAAAATCCCATGAAGTTTTCTTCAATCAATCAGATATACATGCTTGCATCAAGTGACGATCCCGCTTCACCTGAAGATGGAAATGATGTGTTCGTTAGGTCTTTGCATGAAGCATCACAACACATGTCTGAGGACGCATTTGATGTTCTTATGCCTGAAAATGCAATTACGAGTCATGGAGAGGTCATGCTACTTCCTGATATGATTCAGAATGCGGATTGTGGAAGAAGTACTAAGAAAGTTCTGGTGCAAGATTCTGCAGCCAAGGAAGAGGCGCAAATTCATGAAGAGGTTAATGGTCAGTTTATTGAGCAGACTCTGAAATTGGAGGAGCAAATCACTTCTCCAGCTGACTTAGCCTCAGGAATCCAGGAGCCTGACATGCAACACAAGACAGAAACCCCTTCTGCTGCCAAACCTAGTTCATCTAAGAAAACTAGAAAGCGGGGAAGGCGAAAATTCGGGATGAGGAAACAGAAACGTAAAGTGACAGGTTAGCTGGATGAATGGGACTAGCAGATGGTTGTTTTGCTTCTTATTTGGTCGATGGAGGTTAGAATTTTGTTAGTGGTTATTGTTCTTCTTCTACTGTATATTTTCCATGCCATGCTCCTCCCCCCTCTCACCTGCACAGATCAACTCAATCATTTGTATATGCTGCA ATGTTATCTTTTCTCACAACTTCATATGATATTCACGTGAAGAAAAAGTTGACAGATCACTGGAAAAAGTTTATAAGTCCTGTGACGTGGCGGTGTCGATGGTTAGAATTGAAAATTAGGAAACTTCAGTCTCAATCGTCTAAATATGATAGGGAACTTGCATTATATGATCAAAGAAAGCAGTCTGTCTATGAGCAATTCTCAACGGAAGATTTTGATGTGAAGTCAACAGGATTCTCAAGTCACACTCAAAGAGACAGAATAATGAAAAGAAAGAAAAGGAAGAAAAATGAAGAGACAACTGAAGTAGCTTCATATATGGCACATCACAATTTGTTTTCATATTATGACAAGACAAAGAATTTGAGACATGATGGCATCAATGACTTCCGGACAATTGCAACTGACGGATGGCCATCTTCTATGTTAGGAGATAATGATAATAATTTGGAAGAGATGTTTCTAAAAATTGAAGCTGCGCAGTCAAGAGTTCATGAGTTGAAGAACAGAATTGACAAGGTGGTGAATGAAAATCCCATGAAGTTTTCTTCAATCAATCAGATATACATGCTTGCATCAAGTGACGATCCCGCTTCACCTGAAGATGGAAATGATGTGTTCGTTAGGTCTTTGCATGAAGCATCACAACACATGTCTGAGGACGCATTTGATGTTCTTATGCCTGAAAATGCAATTACGAGTCATGGAGAGGTCATGCTACTTCCTGATATGATTCAGAATGCGGATTGTGGAAGAAGTACTAAGAAAGTTCTGGTGCAAGATTCTGCAGCCAAGGAAGAGGCGCAAATTCATGAAGAGGTTAATGGTCAGTTTATTGAGCAGACTCTGAAATTGGAGGAGCAAATCACTTCTCCAGCTGACTTAGCCTCAGGAATCCAGGAGCCTGACATGCAACACAAGACAGAAACCCCTTCTGCTGCCAAACCTAGTTCATCTAAGAAAACTAGAAAGCGGGGAAGGCGAAAATTCGGGATGAGGAAACAGAAACGTAAAGTGACAGGTTAG MLSFLTTSYDIHVKKKLTDHWKKFISPVTWRCRWLELKIRKLQSQSSKYDRELALYDQRKQSVYEQFSTEDFDVKSTGFSSHTQRDRIMKRKKRKKNEETTEVASYMAHHNLFSYYDKTKNLRHDGINDFRTIATDGWPSSMLGDNDNNLEEMFLKIEAAQSRVHELKNRIDKVVNENPMKFSSINQIYMLASSDDPASPEDGNDVFVRSLHEASQHMSEDAFDVLMPENAITSHGEVMLLPDMIQNADCGRSTKKVLVQDSAAKEEAQIHEEVNGQFIEQTLKLEEQITSPADLASGIQEPDMQHKTETPSAAKPSSSKKTRKRGRRKFGMRKQKRKVTG
BLAST of Carg20924 vs. NCBI nr
Match: XP_022946542.1 (uncharacterized protein LOC111450568 isoform X2 [Cucurbita moschata]) HSP 1 Score: 532.7 bits (1371), Expect = 9.0e-148 Identity = 311/341 (91.20%), Postives = 312/341 (91.50%), Query Frame = 0
BLAST of Carg20924 vs. NCBI nr
Match: XP_022946550.1 (uncharacterized protein LOC111450568 isoform X3 [Cucurbita moschata]) HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147 Identity = 307/347 (88.47%), Postives = 311/347 (89.63%), Query Frame = 0
BLAST of Carg20924 vs. NCBI nr
Match: XP_022946534.1 (uncharacterized protein LOC111450568 isoform X1 [Cucurbita moschata]) HSP 1 Score: 531.9 bits (1369), Expect = 1.5e-147 Identity = 307/347 (88.47%), Postives = 311/347 (89.63%), Query Frame = 0
BLAST of Carg20924 vs. NCBI nr
Match: XP_022974818.1 (uncharacterized protein LOC111473601 isoform X2 [Cucurbita maxima]) HSP 1 Score: 527.7 bits (1358), Expect = 2.9e-146 Identity = 308/341 (90.32%), Postives = 311/341 (91.20%), Query Frame = 0
BLAST of Carg20924 vs. NCBI nr
Match: XP_022974820.1 (uncharacterized protein LOC111473601 isoform X3 [Cucurbita maxima]) HSP 1 Score: 526.9 bits (1356), Expect = 5.0e-146 Identity = 304/347 (87.61%), Postives = 310/347 (89.34%), Query Frame = 0
BLAST of Carg20924 vs. TAIR10
Match: AT4G37440.1 (unknown protein) HSP 1 Score: 137.9 bits (346), Expect = 1.2e-32 Identity = 81/223 (36.32%), Postives = 122/223 (54.71%), Query Frame = 0
BLAST of Carg20924 vs. TAIR10
Match: AT3G59670.1 (unknown protein) HSP 1 Score: 131.3 bits (329), Expect = 1.1e-30 Identity = 110/343 (32.07%), Postives = 172/343 (50.15%), Query Frame = 0
BLAST of Carg20924 vs. TAIR10
Match: AT3G50040.1 (unknown protein) HSP 1 Score: 104.4 bits (259), Expect = 1.4e-22 Identity = 64/188 (34.04%), Postives = 99/188 (52.66%), Query Frame = 0
BLAST of Carg20924 vs. TrEMBL
Match: tr|A0A0A0L704|A0A0A0L704_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G118120 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 1.9e-109 Identity = 215/325 (66.15%), Postives = 251/325 (77.23%), Query Frame = 0
BLAST of Carg20924 vs. TrEMBL
Match: tr|A0A1S3AUK2|A0A1S3AUK2_CUCME (uncharacterized protein LOC103483139 OS=Cucumis melo OX=3656 GN=LOC103483139 PE=4 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 1.1e-104 Identity = 203/302 (67.22%), Postives = 233/302 (77.15%), Query Frame = 0
BLAST of Carg20924 vs. TrEMBL
Match: tr|A0A2N9FWG3|A0A2N9FWG3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19367 PE=4 SV=1) HSP 1 Score: 231.1 bits (588), Expect = 3.7e-57 Identity = 137/328 (41.77%), Postives = 199/328 (60.67%), Query Frame = 0
BLAST of Carg20924 vs. TrEMBL
Match: tr|A0A2P4H5A0|A0A2P4H5A0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_27180 PE=4 SV=1) HSP 1 Score: 214.9 bits (546), Expect = 2.8e-52 Identity = 145/344 (42.15%), Postives = 195/344 (56.69%), Query Frame = 0
BLAST of Carg20924 vs. TrEMBL
Match: tr|A0A2P5DA91|A0A2P5DA91_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_257540 PE=4 SV=1) HSP 1 Score: 211.5 bits (537), Expect = 3.1e-51 Identity = 128/303 (42.24%), Postives = 185/303 (61.06%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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