Carg20914 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CACAGCCATGTTCAACTGGGTTCATTCCAACTTCCACTACACCCCTCTTAAAGGTTTGATTTTCTTTTTTTCATACTATTTTTTCTACTGTTGAATCATTTTGTCCTCTATCTCGTTACACTTTTAAAATTGTGTTAAATACATGTAATGTGTTTCTAAACTTTAAATGTTAACGTATCCAATGAATCGAGTCAAATAATATAAATTTTGACCTGACTAAGAGTGTTTGTAGGTTGAGTTAGATCTATATGGACATTTTTTAGACCCAACTTAATGAATTGAATCATAAAATTTTCAACCAAAACGAACCTTATTAAATAACGAATCCAATTCAACTGAACCAAAAAATTAAGTTGGATTGGTTCGAGCAGTTTAAAATTAAAAATAAATTTAGTTTTAGAATAGAAATAAGTTTCTAACTCAATTCAATTCGAATAGTATTGGTTGCTTTGGGTTAGTCGAATTTTTTGGGTTATCAAATTTTTGAACACCCCTAAACCCGACTCAATCTAACTCGTGTAATACATTCCTATTACAACGATGAATTTTTCTGTAAATTGTTAGCTTCGAGGAAGAAAAGTGAATCTATCGAAAAGGAGGCCAAAAGGCAAGGATTATCAAAGCAAGTGGATGAGATGGTTGATGTTCTTGATGATTGGAGGATCAATGGCTGTCGTCTTACCATTTTCTTCATGGGCTTTGACAAATCATCAAAATCCAGAAATTATAAACCCCAATATTTCAATTTGAAGGAGGGAAAGAGAGACAAAATTGACGACGACGATAACGACAACGACAACGACGGTTTGAGCCCGTTAATGGCAACGACGTTCCCCAACAACTTCGACGACAATGGTGAGTTTTGTACTGAATTCGACAAGTCCCGAGTTGTCGTGGCCATTGAGCGACATGTCGCTCGACTCCACCGAAGAGTGACGTTGGCAGATCTGCTCATGATGGATGCCGATGGGAAGGCGAAGCTGGATTTGAAGGAGGATTTGCCGGAAGTTGAGATGGCCGACGGCTCCTGTTTCGCCAAAAAGCCGGAGATGGAGGCGGCGCCACCTGCGACAAATCTCCGGAAAGTAAGCCACTGCCCATCTTACACTCGTTTACACTAAATAATATATATTATTATAGTTCATTGTCACACGATTTCAGGTCTCAATTTTTATTTTAAAAATAACCTTACTTTTAAAATGATAATGAAATAAATGGTTGAATATTATATTATCCAAAATCTAAAAATAATTGTGAAAGTTGAACGTGGAAAAGTGAAAATTCAACTCAAATTTTAACCCATTTAATTGTTTTTCTCCGAATTATTCTTAAAAAATAAGCTAATGAGGAAAATGACGAGGAGAAAGATTCATACCGAGCGGGACAATGAGCAAATGCTTGGAGAAAAAAAGATTAACTATAGCTCACAAACTAAAAGGAAAGGCCTTTGGACAACCAACCTCTCTTCTTCGATTCAAGGTATAATTAAGTACGTTCAAATTTAGGGTTCGTTCGGTAATATTTTTCATTTCTTACTTTTCATTTTTTCGATTTTTTTTTATTAAAAAAAAAAATTAGGGTTCATCTTTTCGTCCCAATCCCATGTTATTTTATTTGCTCAAATATCAAAATGTTTGGTCGAATTTGATGAAAATGTTTTAAAATGGTGAAAATTCAATTTTAAAATTTAGAAAACAATCTGAAAAAGAAAATTATATATATATATATATAACCAAAATTGCAAATAAATTTAAGAATTTTAAATAATCCTCCTTAAATAAAAATTAATTTGAAGAATATTCATTTCTATATTTAAGAATATTCTTTTTTGGTTGCAGCTGCTTCTCCTTGAGATCCCATCAATGGAGTTCCTTTTTTTTGTCTTTATTTTATTTTATTTTCCCTATTTTAAGGTTGTAAATGAGCCATTTCAAAGCCATGTTTTTCACTTCTCTTCAGCTTTGTGGTATCTCTTTTTATTATTATAATAATAATTATTGTGGATTATCTTGATT CACAGCCATGTTCAACTGGGTTCATTCCAACTTCCACTACACCCCTCTTAAAGCTTCGAGGAAGAAAAGTGAATCTATCGAAAAGGAGGCCAAAAGGCAAGGATTATCAAAGCAAGTGGATGAGATGGTTGATGTTCTTGATGATTGGAGGATCAATGGCTGTCGTCTTACCATTTTCTTCATGGGCTTTGACAAATCATCAAAATCCAGAAATTATAAACCCCAATATTTCAATTTGAAGGAGGGAAAGAGAGACAAAATTGACGACGACGATAACGACAACGACAACGACGGTTTGAGCCCGTTAATGGCAACGACGTTCCCCAACAACTTCGACGACAATGGTGAGTTTTGTACTGAATTCGACAAGTCCCGAGTTGTCGTGGCCATTGAGCGACATGTCGCTCGACTCCACCGAAGAGTGACGTTGGCAGATCTGCTCATGATGGATGCCGATGGGAAGGCGAAGCTGGATTTGAAGGAGGATTTGCCGGAAGTTGAGATGGCCGACGGCTCCTGTTTCGCCAAAAAGCCGGAGATGGAGGCGGCGCCACCTGCGACAAATCTCCGGAAACTAATGAGGAAAATGACGAGGAGAAAGATTCATACCGAGCGGGACAATGAGCAAATGCTTGGAGAAAAAAAGATTAACTATAGCTCACAAACTAAAAGGAAAGGCCTTTGGACAACCAACCTCTCTTCTTCGATTCAAGCTGCTTCTCCTTGAGATCCCATCAATGGAGTTCCTTTTTTTTGTCTTTATTTTATTTTATTTTCCCTATTTTAAGGTTGTAAATGAGCCATTTCAAAGCCATGTTTTTCACTTCTCTTCAGCTTTGTGGTATCTCTTTTTATTATTATAATAATAATTATTGTGGATTATCTTGATT ATGTTCAACTGGGTTCATTCCAACTTCCACTACACCCCTCTTAAAGCTTCGAGGAAGAAAAGTGAATCTATCGAAAAGGAGGCCAAAAGGCAAGGATTATCAAAGCAAGTGGATGAGATGGTTGATGTTCTTGATGATTGGAGGATCAATGGCTGTCGTCTTACCATTTTCTTCATGGGCTTTGACAAATCATCAAAATCCAGAAATTATAAACCCCAATATTTCAATTTGAAGGAGGGAAAGAGAGACAAAATTGACGACGACGATAACGACAACGACAACGACGGTTTGAGCCCGTTAATGGCAACGACGTTCCCCAACAACTTCGACGACAATGGTGAGTTTTGTACTGAATTCGACAAGTCCCGAGTTGTCGTGGCCATTGAGCGACATGTCGCTCGACTCCACCGAAGAGTGACGTTGGCAGATCTGCTCATGATGGATGCCGATGGGAAGGCGAAGCTGGATTTGAAGGAGGATTTGCCGGAAGTTGAGATGGCCGACGGCTCCTGTTTCGCCAAAAAGCCGGAGATGGAGGCGGCGCCACCTGCGACAAATCTCCGGAAACTAATGAGGAAAATGACGAGGAGAAAGATTCATACCGAGCGGGACAATGAGCAAATGCTTGGAGAAAAAAAGATTAACTATAGCTCACAAACTAAAAGGAAAGGCCTTTGGACAACCAACCTCTCTTCTTCGATTCAAGCTGCTTCTCCTTGA MFNWVHSNFHYTPLKASRKKSESIEKEAKRQGLSKQVDEMVDVLDDWRINGCRLTIFFMGFDKSSKSRNYKPQYFNLKEGKRDKIDDDDNDNDNDGLSPLMATTFPNNFDDNGEFCTEFDKSRVVVAIERHVARLHRRVTLADLLMMDADGKAKLDLKEDLPEVEMADGSCFAKKPEMEAAPPATNLRKLMRKMTRRKIHTERDNEQMLGEKKINYSSQTKRKGLWTTNLSSSIQAASP
BLAST of Carg20914 vs. NCBI nr
Match: XP_022927881.1 (uncharacterized protein LOC111434343 [Cucurbita moschata]) HSP 1 Score: 394.0 bits (1011), Expect = 3.5e-106 Identity = 212/225 (94.22%), Postives = 213/225 (94.67%), Query Frame = 0
BLAST of Carg20914 vs. NCBI nr
Match: XP_023540247.1 (uncharacterized protein LOC111800673 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 372.1 bits (954), Expect = 1.4e-99 Identity = 203/226 (89.82%), Postives = 210/226 (92.92%), Query Frame = 0
BLAST of Carg20914 vs. NCBI nr
Match: XP_022974851.1 (uncharacterized protein LOC111473621 [Cucurbita maxima]) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 190/228 (83.33%), Postives = 203/228 (89.04%), Query Frame = 0
BLAST of Carg20914 vs. NCBI nr
Match: XP_022975272.1 (uncharacterized protein LOC111474406 [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 7.1e-75 Identity = 160/191 (83.77%), Postives = 172/191 (90.05%), Query Frame = 0
BLAST of Carg20914 vs. NCBI nr
Match: XP_023521995.1 (bystin-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 266.2 bits (679), Expect = 1.1e-67 Identity = 146/161 (90.68%), Postives = 151/161 (93.79%), Query Frame = 0
BLAST of Carg20914 vs. TrEMBL
Match: tr|A0A1S4DSI3|A0A1S4DSI3_CUCME (uncharacterized protein LOC103483155 OS=Cucumis melo OX=3656 GN=LOC103483155 PE=4 SV=1) HSP 1 Score: 167.5 bits (423), Expect = 3.5e-38 Identity = 113/224 (50.45%), Postives = 143/224 (63.84%), Query Frame = 0
BLAST of Carg20914 vs. TrEMBL
Match: tr|A0A2P4KRW0|A0A2P4KRW0_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_37650 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.4e-10 Identity = 86/255 (33.73%), Postives = 115/255 (45.10%), Query Frame = 0
BLAST of Carg20914 vs. TrEMBL
Match: tr|A0A2I4GSA7|A0A2I4GSA7_9ROSI (uncharacterized protein LOC109010404 OS=Juglans regia OX=51240 GN=LOC109010404 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 9.1e-10 Identity = 88/244 (36.07%), Postives = 122/244 (50.00%), Query Frame = 0
BLAST of Carg20914 vs. TrEMBL
Match: tr|A0A0L9VQN5|A0A0L9VQN5_PHAAN (Uncharacterized protein (Fragment) OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g020900 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09 Identity = 75/256 (29.30%), Postives = 114/256 (44.53%), Query Frame = 0
BLAST of Carg20914 vs. TrEMBL
Match: tr|A0A0S3SZ53|A0A0S3SZ53_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.09G176900 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 2.0e-09 Identity = 75/256 (29.30%), Postives = 114/256 (44.53%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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