Carg20864 (gene) Silver-seed gourd

Overview
NameCarg20864
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionUnknown protein
LocationCucurbita_argyrosperma_scaffold_141 : 14834 .. 16986 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCGAGGAGTTAGAGCTTCGAGTTTCTGCTGTCTGGATTCGGTTTAAGGTTTGAAGCTCTGTGGCAATCCTGTTTTAGAAGTATTTGGATCACATTGCACGGTATTTACTCTGTTACGCTCCAACTTAACGATTCTGGTAATATATTATGCTCATGATGCGCTGAAAGTTACTCGGAAAGTTGAATTTGGTGTAGAATTGGAATTCGTATCTTTGCATGATTAGTTACGACTGCTTGATCGATTGAGGTTAGGCGTTAGCAGTATTAGCACATGAATGACAATCGGACATTTGCCTGAGTATGCCTGAATTTGGGGCTTTGTTTTCCTCTTTGAATCACGTTCTTGCTTTGTATGATGATCGCGTAGAACATTGAATACAATCATGTATTATGATCCTTGCAGAAAACAACGTTTATTTGCTACAATGGGAAACTATCGACATTCCAGTATTCTGCATTCATCTCTATAAATGGTCTGATTTTGTCCCAGTTAAGCACAGTTCTTCACTTGCTTCTTTAACTTCTAGTCCATCCATAGGAAACCAATGTTGTCATTCTGGAAGATGGAGACGATCGTTACGTATGTTACTGAAGACTTTAGGATGTCTCAGTCCCATATGCCATAAAGGAGATTCAGCTGAAAATATCTCCTGTGATGTTCAGAGTCAGAACCAATCCCCTCTTGGTTCTTCGTCCATTCATTGGTGTCATCTAGAAAGCTCAATTTATGAAGCAATACTTCACTGCAAAAGGTCAATAGGTGTGTTACACGTTTCTTTCTTTTACAGTTCGTTAAGCTCCAGTTCTTTACTTCATTGTTTCTCATTCTGTTCTTGTTTTAGGGGAATCATGTCCAGAACCAAAAGAAACGGACAATGGAAGGAGATTTCTGGAAGGGTTGTCCTCTTTTTCTATGGCAATATCCCTTTTCCCTTCATTTTCTATGGAGAAATTATATTCTGTTGGTCGTGTGGATGAAAGACTTGGATAGGATCGTAGATTTGTTTATAAACAAAGTATCTCATGCATCCTTGAGTGTGCGTATACCATAGAGTAAGAGAAACGAGTCATTATTCAAGAAAAAACAAGGTATCTGTTGTTGAGGATCGTTGGAAGGAGTCCCACATTGGCTAATTTATAGGTAAGAAATATGAGGCCTATTGGGGAAGTCCAACGCAAAGCCACGAGAGCTTATGCTCAAAGTGGACAATATCATACCACCGTGAAGATCCGTGATTCCTAGCATATGTTCCATTGTTAGTTTCAGTCGTAGGAAATCTGGACGGAAAGCTACAATTTCTGCGTCTAAAGAGTGAAAGAGGAAGAAAGAGTAACGTTAGGCTAGTTGAATGTGAGAGAGGACAGGACATGGACATGGACAAAATGTGTTAGGAAAAAAGCCACGAAGATCAACCTCACAACGTTAGTTTCACAACCTTTTGTTGTTTTCTTTCTTGATCTTTACTGGTTATGGTCTTTGCCCATGGCCATAGGTTATCACCAAAATTCAGTGCACCTTAATCTTGAATTTGATATGGCTTGTTTATGTTATATGAACAGGCGTTGTGTGTTGTGTGTTGTGGAGGATGGTGTTCGAGAACAATGAACAGTTATAGTTGTTCTATAATTGCAGATTTTGTCTTCTTTGGGCTTCCTCTCAAGACTTTAAGAAGAGGTTTCCATACTCTTAAATGCTTTCTTCTTTTCCTCAGCTGATGTGGGATGGGATCTCACAGTGCACTTGCCTAATCACGAAAAATACTTAAACATACAGAAATGAAGCCATCTGTATTAGATGAAAAACAACGAAGTCTGAAGCTAATGTGTCCTACAAAGGCAAAAGAAAAGAAGATAGAAAGAAGAAGAATTCCCCACCACAAAAGGCATTTGGACGGTGAGGAGGACGGAAGACATTGATATGGGAAGCATGTCCCATTTGTCAACAATGAGTAGCTGTTGATGCAATTGATGCGGCGGCAAATGCCCAATATTAAGATCAGATCATCTTTATGTTACTTTGTCCACCTTCTAACTACGATTGAAATCAAATGGGTTTGCATTTTTCGTACAACAAATGATTCCATGTATTTTTATGTAGTTTTATCATAAGCTTGGCTTTACCCATAGGAAGATTAAACCACCCATGCAGTAG

mRNA sequence

ATGCGAGGAGTTAGAGCTTCGAAAAACAACGTTTATTTGCTACAATGGGAAACTATCGACATTCCAGTATTCTGCATTCATCTCTATAAATGGTCTGATTTTGTCCCAGTTAAGCACAGTTCTTCACTTGCTTCTTTAACTTCTAGTCCATCCATAGGAAACCAATGTTGTCATTCTGGAAGATGGAGACGATCGTTACGTATGTTACTGAAGACTTTAGGATGTCTCAGTCCCATATGCCATAAAGGAGATTCAGCTGAAAATATCTCCTGTGATGTTCAGAGTCAGAACCAATCCCCTCTTGGTTCTTCGTCCATTCATTGGTGTCATCTAGAAAGCTCAATTTATGAAGCAATACTTCACTGCAAAAGGGGAATCATGTCCAGAACCAAAAGAAACGGACAATGGAAGGAGATTTCTGGAAGGTTTTATCATAAGCTTGGCTTTACCCATAGGAAGATTAAACCACCCATGCAGTAG

Coding sequence (CDS)

ATGCGAGGAGTTAGAGCTTCGAAAAACAACGTTTATTTGCTACAATGGGAAACTATCGACATTCCAGTATTCTGCATTCATCTCTATAAATGGTCTGATTTTGTCCCAGTTAAGCACAGTTCTTCACTTGCTTCTTTAACTTCTAGTCCATCCATAGGAAACCAATGTTGTCATTCTGGAAGATGGAGACGATCGTTACGTATGTTACTGAAGACTTTAGGATGTCTCAGTCCCATATGCCATAAAGGAGATTCAGCTGAAAATATCTCCTGTGATGTTCAGAGTCAGAACCAATCCCCTCTTGGTTCTTCGTCCATTCATTGGTGTCATCTAGAAAGCTCAATTTATGAAGCAATACTTCACTGCAAAAGGGGAATCATGTCCAGAACCAAAAGAAACGGACAATGGAAGGAGATTTCTGGAAGGTTTTATCATAAGCTTGGCTTTACCCATAGGAAGATTAAACCACCCATGCAGTAG

Protein sequence

MRGVRASKNNVYLLQWETIDIPVFCIHLYKWSDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKGDSAENISCDVQSQNQSPLGSSSIHWCHLESSIYEAILHCKRGIMSRTKRNGQWKEISGRFYHKLGFTHRKIKPPMQ
Homology
[Close]
BLAST of Carg20864 vs. NCBI nr
Match: XP_022147281.1 (probable membrane-associated kinase regulator 6 [Momordica charantia] >XP_022147282.1 probable membrane-associated kinase regulator 6 [Momordica charantia])

HSP 1 Score: 126.3 bits (316), Expect = 9.1e-26
Identity = 68/110 (61.82%), Postives = 77/110 (70.00%), Query Frame = 0 

Query: 32  SDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKG-------- 91
           SDFVPV H+SSLASL  SP+I N+ CHSGRWRRSL ML K LGCLSPICHKG        
Sbjct: 115 SDFVPVLHNSSLASLNLSPAIQNRSCHSGRWRRSLCMLQKYLGCLSPICHKGHPGDITWV 174

Query: 92  DSAENISCDVQSQNQSP-------LGSSSIHWCHLESSIYEAILHCKRGI 127
           D  ++ S DV+S++ SP         SSS  WCHLESSIYEAILHCK+ I
Sbjct: 175 DDIKHKSRDVKSRHHSPRVSPQRNSSSSSGDWCHLESSIYEAILHCKKSI 224

[Close]
BLAST of Carg20864 vs. NCBI nr
Match: XP_004134316.2 (PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis sativus] >KGN56472.1 hypothetical protein Csa_3G120510 [Cucumis sativus])

HSP 1 Score: 124.8 bits (312), Expect = 2.6e-25
Identity = 68/110 (61.82%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 32  SDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKGDSAE---- 91
           SDFVPV+ +SSL+SLTSSP+I N+ CHSGRWR++L ML K+LGCLSPICHK D AE    
Sbjct: 93  SDFVPVELNSSLSSLTSSPAIENR-CHSGRWRKTLCMLQKSLGCLSPICHKVDPAEVNLD 152

Query: 92  ----NISCDVQSQNQSP-------LGSSSIHWCHLESSIYEAILHCKRGI 127
                 S DV+SQ QSP       +G SS  WCHLE+SIYEAILHCK+ I
Sbjct: 153 DDIKQKSSDVRSQRQSPRVSPQSNIGPSSGDWCHLENSIYEAILHCKKSI 201

[Close]
BLAST of Carg20864 vs. NCBI nr
Match: XP_016898942.1 (PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis melo])

HSP 1 Score: 120.9 bits (302), Expect = 3.8e-24
Identity = 64/110 (58.18%), Postives = 78/110 (70.91%), Query Frame = 0 

Query: 32  SDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKGDSAE---- 91
           SDFV  +  SSL+SLTSSP+I N+ CHSG+WR++L ML K+LGCLSPICHK D AE    
Sbjct: 93  SDFVSAELDSSLSSLTSSPAIENR-CHSGKWRKTLCMLQKSLGCLSPICHKVDPAEVNWV 152

Query: 92  ----NISCDVQSQNQSP-------LGSSSIHWCHLESSIYEAILHCKRGI 127
                 SCD+++Q QSP       +G SS  WCHLE+SIYEAILHCK+ I
Sbjct: 153 DDIKQKSCDIRNQRQSPRVSPQSNIGPSSGDWCHLENSIYEAILHCKKSI 201

[Close]
BLAST of Carg20864 vs. NCBI nr
Match: XP_012083287.1 (probable membrane-associated kinase regulator 6 [Jatropha curcas] >XP_020538482.1 probable membrane-associated kinase regulator 6 [Jatropha curcas] >KDP28549.1 hypothetical protein JCGZ_14320 [Jatropha curcas])

HSP 1 Score: 67.0 bits (162), Expect = 6.5e-08
Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 0 

Query: 40  SSSLASLTSSPSIGNQCCHSGRWRRSL-RMLLKTLGCLSPICHKGDSAENISC------- 99
           +SSL S T  P++  QC    RWR+S  R+LLK  G L P+C+K   + N +        
Sbjct: 108 TSSLFSRTVVPTVHVQCHIFKRWRKSSERILLKCFGYLRPLCYKITGSRNSTSVDDIDRR 167

Query: 100 ------DVQSQNQSP-----LGSSSIHWCHLESSIYEAILHCKRGI 127
                  V+S + SP     + +S   WC +ESSIYEA+LHCKR I
Sbjct: 168 VDRRVRQVKSWSNSPQESPGISNSRTDWCDIESSIYEAVLHCKRSI 213

[Close]
BLAST of Carg20864 vs. NCBI nr
Match: OAY49085.1 (hypothetical protein MANES_05G028200 [Manihot esculenta])

HSP 1 Score: 66.2 bits (160), Expect = 1.1e-07
Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 29  YKWSDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRS-LRMLLKTLGCLSPICHK-GDSA 88
           Y   D V   HSS   S    P++   C    RWR++ LR+L K    L P+CHK   S 
Sbjct: 101 YSSLDLVSKMHSSFSTSAV-VPTVHIHCHIFRRWRKAPLRILQKCFRYLRPLCHKISGSI 160

Query: 89  ENISCD--------VQSQNQSPLGS-SSIHWCHLESSIYEAILHCKRGI 127
           ++ S D        ++ QN SP  S  +  W H+ESSIYEA+LHCKR I
Sbjct: 161 QSTSTDDIDGRARQIKGQNNSPQASPGTTDWSHIESSIYEAVLHCKRSI 208

[Close]
BLAST of Carg20864 vs. TrEMBL
Match: tr|A0A0A0L7B1|A0A0A0L7B1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120510 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 1.8e-25
Identity = 68/110 (61.82%), Postives = 80/110 (72.73%), Query Frame = 0 

Query: 32  SDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKGDSAE---- 91
           SDFVPV+ +SSL+SLTSSP+I N+ CHSGRWR++L ML K+LGCLSPICHK D AE    
Sbjct: 93  SDFVPVELNSSLSSLTSSPAIENR-CHSGRWRKTLCMLQKSLGCLSPICHKVDPAEVNLD 152

Query: 92  ----NISCDVQSQNQSP-------LGSSSIHWCHLESSIYEAILHCKRGI 127
                 S DV+SQ QSP       +G SS  WCHLE+SIYEAILHCK+ I
Sbjct: 153 DDIKQKSSDVRSQRQSPRVSPQSNIGPSSGDWCHLENSIYEAILHCKKSI 201

[Close]
BLAST of Carg20864 vs. TrEMBL
Match: tr|A0A1S4DSG7|A0A1S4DSG7_CUCME (probable membrane-associated kinase regulator 6 OS=Cucumis melo OX=3656 GN=LOC103483234 PE=4 SV=1)

HSP 1 Score: 120.9 bits (302), Expect = 2.5e-24
Identity = 64/110 (58.18%), Postives = 78/110 (70.91%), Query Frame = 0 

Query: 32  SDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKTLGCLSPICHKGDSAE---- 91
           SDFV  +  SSL+SLTSSP+I N+ CHSG+WR++L ML K+LGCLSPICHK D AE    
Sbjct: 93  SDFVSAELDSSLSSLTSSPAIENR-CHSGKWRKTLCMLQKSLGCLSPICHKVDPAEVNWV 152

Query: 92  ----NISCDVQSQNQSP-------LGSSSIHWCHLESSIYEAILHCKRGI 127
                 SCD+++Q QSP       +G SS  WCHLE+SIYEAILHCK+ I
Sbjct: 153 DDIKQKSCDIRNQRQSPRVSPQSNIGPSSGDWCHLENSIYEAILHCKKSI 201

[Close]
BLAST of Carg20864 vs. TrEMBL
Match: tr|A0A067K9Q3|A0A067K9Q3_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14320 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 4.3e-08
Identity = 42/106 (39.62%), Postives = 57/106 (53.77%), Query Frame = 0 

Query: 40  SSSLASLTSSPSIGNQCCHSGRWRRSL-RMLLKTLGCLSPICHKGDSAENISC------- 99
           +SSL S T  P++  QC    RWR+S  R+LLK  G L P+C+K   + N +        
Sbjct: 108 TSSLFSRTVVPTVHVQCHIFKRWRKSSERILLKCFGYLRPLCYKITGSRNSTSVDDIDRR 167

Query: 100 ------DVQSQNQSP-----LGSSSIHWCHLESSIYEAILHCKRGI 127
                  V+S + SP     + +S   WC +ESSIYEA+LHCKR I
Sbjct: 168 VDRRVRQVKSWSNSPQESPGISNSRTDWCDIESSIYEAVLHCKRSI 213

[Close]
BLAST of Carg20864 vs. TrEMBL
Match: tr|A0A2C9VSR6|A0A2C9VSR6_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G028200 PE=4 SV=1)

HSP 1 Score: 66.2 bits (160), Expect = 7.4e-08
Identity = 44/109 (40.37%), Postives = 57/109 (52.29%), Query Frame = 0 

Query: 29  YKWSDFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRS-LRMLLKTLGCLSPICHK-GDSA 88
           Y   D V   HSS   S    P++   C    RWR++ LR+L K    L P+CHK   S 
Sbjct: 101 YSSLDLVSKMHSSFSTSAV-VPTVHIHCHIFRRWRKAPLRILQKCFRYLRPLCHKISGSI 160

Query: 89  ENISCD--------VQSQNQSPLGS-SSIHWCHLESSIYEAILHCKRGI 127
           ++ S D        ++ QN SP  S  +  W H+ESSIYEA+LHCKR I
Sbjct: 161 QSTSTDDIDGRARQIKGQNNSPQASPGTTDWSHIESSIYEAVLHCKRSI 208

[Close]
BLAST of Carg20864 vs. TrEMBL
Match: tr|A0A2C9WQE4|A0A2C9WQE4_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G251500 PE=4 SV=1)

HSP 1 Score: 65.5 bits (158), Expect = 1.3e-07
Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0 

Query: 33  DFVPVKHSSSLASLTSSPSIGNQCCHSGRWRRSLRMLLKT-LGCLSPICHK--------- 92
           D +P K  SS  S    P++  +CC+  RWR+S + +L+   G L P+CHK         
Sbjct: 105 DLLP-KMQSSFPSSAVIPAVHIRCCNFERWRKSSKRILQNCFGYLRPLCHKIPGSRRSTR 164

Query: 93  GDSAENISCDVQSQNQSPLGS-----SSIHWCHLESSIYEAILHCKRGI 127
            D  +  +  V+S ++SP  S     SS   C +E+SIYEA+LHCKR I
Sbjct: 165 VDDIDRRARQVKSWSKSPRASPGITYSSTDCCDIENSIYEAVLHCKRSI 212

The following BLAST results are available for this feature:
BLAST of Carg20864 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022147281.19.1e-2661.82probable membrane-associated kinase regulator 6 [Momordica charantia] >XP_022147... [more]
XP_004134316.22.6e-2561.82PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis sativus] >KG... [more]
XP_016898942.13.8e-2458.18PREDICTED: probable membrane-associated kinase regulator 6 [Cucumis melo][more]
XP_012083287.16.5e-0839.62probable membrane-associated kinase regulator 6 [Jatropha curcas] >XP_020538482.... [more]
OAY49085.11.1e-0740.37hypothetical protein MANES_05G028200 [Manihot esculenta][more]
BLAST of Carg20864 vs. TAIR10
Match NameE-valueIdentityDescription
BLAST of Carg20864 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg20864 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0L7B1|A0A0A0L7B1_CUCSA1.8e-2561.82Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G120510 PE=4 SV=1[more]
tr|A0A1S4DSG7|A0A1S4DSG7_CUCME2.5e-2458.18probable membrane-associated kinase regulator 6 OS=Cucumis melo OX=3656 GN=LOC10... [more]
tr|A0A067K9Q3|A0A067K9Q3_JATCU4.3e-0839.62Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_14320 PE=4 SV=1[more]
tr|A0A2C9VSR6|A0A2C9VSR6_MANES7.4e-0840.37Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_05G028200 PE=4 SV=... [more]
tr|A0A2C9WQE4|A0A2C9WQE4_MANES1.3e-0737.61Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_01G251500 PE=4 SV=... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20864-RACarg20864-RAmRNA