Carg20861 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20861
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Late embryogenesis abundant protein
Location	Cucurbita_argyrosperma_scaffold_141 : 2959 .. 3987 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TTCTGCATATCCATTTCTCCGTCTTTGCTCTGTATTTCTTCATCTTCTTGCAATTCTCTTCAATCTCCTTGCGAAAATGGCAGGTTTGATCGACAGAGCGAAGAACTATGTCTCCACGAAGGTCGCTAACATGCCGAAGCCAGAGGCCTCCGTCACCGACGTCGATTTCAAGCGTTTGAGCCGCGATTCCGTCGAGTATTTGGCCTATGTTTCCGTCTCCAATCCTTACAGCCACGCCATTCCTATCTGTGAGATTTCTTACAATCTCAAAAGCGACGGCAGGTTCGTTCGTTCGTTTACTCGCATTTTCAAATTTACTCTGTTTTTTGATTTCGTAAATTAGGTCACAATCTCACGATCGATTAGTACGTATATATTGAATCGATCGATTAGACGATCTCGATTCGTTCAATAGGAAAGAAGAAATGAAATGTTGTTGTTGTTGTTGTTGAGATCGTGTGATTGATGGATCGATCGAATGTGCAGATCGGTTGTGACAGGGACGGTGCCAGATCCAGGATCTCTGAAAGCGAGCGGCTCGACGATGGTGGAAGTAGGGGTGAAGGTGCCGCACTCGGTAATGATAAGCTTAGCGAAGGACATCGGGCGAGATTGGGATATTGATTACGAGTTGCTGATCGGACTCACCATTGACCTTCCGGTCATTGGAGACTTCACCATTCCTCTGTCTACAAAAGGCGAGATCAAGCTCCCTACCTTCTCTGACATGTTCAAATAGCTATATTTCTTTCTTTCTTCGGTTAATTTATGTTTAATCAAATGTTACAAGTTCCAAATCACGCTTACGTGATGGATAATAAGGTTTCTTGTTAGCAAGAGCAACATCATCTCCCTACCATATCTATATTCTCTTAACAGTTTGCGTCCAGTTCTATATATATATATCCAACCCTAAAATACTTGAGATGAGTTTTTTTTTTTTTTTTTCAACAATATAAAACTAACCAATAATTCTCTAAATAGCCTCCCTTTAATTCGTTTCTCTGGAGCCTTAGAACAAAGTATCAT

mRNA sequence

TTCTGCATATCCATTTCTCCGTCTTTGCTCTGTATTTCTTCATCTTCTTGCAATTCTCTTCAATCTCCTTGCGAAAATGGCAGGTTTGATCGACAGAGCGAAGAACTATGTCTCCACGAAGGTCGCTAACATGCCGAAGCCAGAGGCCTCCGTCACCGACGTCGATTTCAAGCGTTTGAGCCGCGATTCCGTCGAGTATTTGGCCTATGTTTCCGTCTCCAATCCTTACAGCCACGCCATTCCTATCTGTGAGATTTCTTACAATCTCAAAAGCGACGGCAGATCGGTTGTGACAGGGACGGTGCCAGATCCAGGATCTCTGAAAGCGAGCGGCTCGACGATGGTGGAAGTAGGGGTGAAGGTGCCGCACTCGGTAATGATAAGCTTAGCGAAGGACATCGGGCGAGATTGGGATATTGATTACGAGTTGCTGATCGGACTCACCATTGACCTTCCGGTCATTGGAGACTTCACCATTCCTCTGTCTACAAAAGGCGAGATCAAGCTCCCTACCTTCTCTGACATGTTCAAATAGCTATATTTCTTTCTTTCTTCGGTTAATTTATGTTTAATCAAATGTTACAAGTTCCAAATCACGCTTACGTGATGGATAATAAGGTTTCTTGTTAGCAAGAGCAACATCATCTCCCTACCATATCTATATTCTCTTAACAGTTTGCGTCCAGTTCTATATATATATATCCAACCCTAAAATACTTGAGATGAGTTTTTTTTTTTTTTTTTCAACAATATAAAACTAACCAATAATTCTCTAAATAGCCTCCCTTTAATTCGTTTCTCTGGAGCCTTAGAACAAAGTATCAT

Coding sequence (CDS)

ATGGCAGGTTTGATCGACAGAGCGAAGAACTATGTCTCCACGAAGGTCGCTAACATGCCGAAGCCAGAGGCCTCCGTCACCGACGTCGATTTCAAGCGTTTGAGCCGCGATTCCGTCGAGTATTTGGCCTATGTTTCCGTCTCCAATCCTTACAGCCACGCCATTCCTATCTGTGAGATTTCTTACAATCTCAAAAGCGACGGCAGATCGGTTGTGACAGGGACGGTGCCAGATCCAGGATCTCTGAAAGCGAGCGGCTCGACGATGGTGGAAGTAGGGGTGAAGGTGCCGCACTCGGTAATGATAAGCTTAGCGAAGGACATCGGGCGAGATTGGGATATTGATTACGAGTTGCTGATCGGACTCACCATTGACCTTCCGGTCATTGGAGACTTCACCATTCCTCTGTCTACAAAAGGCGAGATCAAGCTCCCTACCTTCTCTGACATGTTCAAATAG

Protein sequence

MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEISYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLIGLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK

Homology

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BLAST of Carg20861 vs. NCBI nr
Match: XP_022933415.1 (desiccation protectant protein Lea14 homolog [Cucurbita moschata])

HSP 1 Score: 302.4 bits (773), Expect = 8.9e-79
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI
Sbjct: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK 153
           GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK
Sbjct: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK 152

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BLAST of Carg20861 vs. NCBI nr
Match: XP_022974652.1 (desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975028.1 desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975577.1 desiccation protectant protein Lea14 homolog [Cucurbita maxima])

HSP 1 Score: 298.1 bits (762), Expect = 1.7e-77
Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI
Sbjct: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SYNLKSDGR+VVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI
Sbjct: 61  SYNLKSDGRTVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK 153
            LTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK
Sbjct: 121 RLTIDLPVIGDFTIPLSTKGEIKLPTFSDMFK 152

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BLAST of Carg20861 vs. NCBI nr
Match: XP_022147435.1 (desiccation protectant protein Lea14 homolog [Momordica charantia])

HSP 1 Score: 256.9 bits (655), Expect = 4.3e-65
Identity = 125/151 (82.78%), Postives = 139/151 (92.05%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MAGLID+AK +V+ KVANMPKPEASVTDVDFK LSRDS EYLA V+VSNPYSH+IPICEI
Sbjct: 1   MAGLIDKAKEFVAEKVANMPKPEASVTDVDFKDLSRDSAEYLAKVTVSNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKSDGR +V+GTVPDPGSLKAS ST++EVGVKVPHS+++SL KDIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIVSGTVPDPGSLKASDSTLLEVGVKVPHSILLSLVKDIGRDWDIDYELDI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLPV+G+FTIPLSTKGEIKLPT SD F
Sbjct: 121 GLTIDLPVVGNFTIPLSTKGEIKLPTISDFF 151

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BLAST of Carg20861 vs. NCBI nr
Match: XP_022979582.1 (desiccation protectant protein Lea14 homolog [Cucurbita maxima])

HSP 1 Score: 254.2 bits (648), Expect = 2.8e-64
Identity = 127/151 (84.11%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA LID+AKN+ + KVA++PKPEASVTDVDFKRLS DSVEYLA VSVSNPYS AIPICEI
Sbjct: 1   MADLIDKAKNFFADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSSAIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKSDGR + TGTVPDPGSLKAS STM+EV VKVPH+V+ISLA+DIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLARDIGRDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLPVIG FTIPLSTKGE+KLPTFSDMF
Sbjct: 121 GLTIDLPVIGSFTIPLSTKGEMKLPTFSDMF 151

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BLAST of Carg20861 vs. NCBI nr
Match: XP_022924605.1 (desiccation protectant protein Lea14 homolog [Cucurbita moschata] >XP_022924606.1 desiccation protectant protein Lea14 homolog [Cucurbita moschata])

HSP 1 Score: 253.4 bits (646), Expect = 4.7e-64
Identity = 126/151 (83.44%), Postives = 138/151 (91.39%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA LID+AKN+++ KVA++PKPEASVTDVDFKRLS DSVEYLA VSVSNPYS AIPICEI
Sbjct: 1   MADLIDKAKNFIADKVADIPKPEASVTDVDFKRLSCDSVEYLANVSVSNPYSCAIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKSDGR + TGTVPDPGSLKAS STM+EV VKVPH+V+ISL +DIGRDWDIDYEL I
Sbjct: 61  SYTLKSDGRVIATGTVPDPGSLKASDSTMLEVAVKVPHTVLISLVRDIGRDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLPVIG FTIPLSTKGE+KLPTFSDMF
Sbjct: 121 GLTIDLPVIGSFTIPLSTKGEMKLPTFSDMF 151

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BLAST of Carg20861 vs. TAIR10
Match: AT1G01470.1 (Late embryogenesis abundant protein)

HSP 1 Score: 208.8 bits (530), Expect = 2.4e-54
Identity = 97/151 (64.24%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+D+AK++V+ K+  +PKPE SVTDVD K ++RDSVEYLA VSV+NPYSH+IPICEI
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           S+   S GR +  G +PDPGSLKA   T +++ V VP+S++ +LA+D+G DWDIDYEL I
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLPV+G+FTIP+S+KGEIKLPTF D F
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151

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BLAST of Carg20861 vs. TAIR10
Match: AT2G46140.1 (Late embryogenesis abundant protein)

HSP 1 Score: 191.0 bits (484), Expect = 5.2e-49
Identity = 89/151 (58.94%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           ++ L+D+AK + + K+AN+P PEA+V DVDFK ++RD V+Y A VSV NPYS +IPIC+I
Sbjct: 16  ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKS  R++ +GT+PDPGSL  SG+T+++V VKV +S+ +SL KD+  DWDIDY+L I
Sbjct: 76  SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLT D+PV+GD TIP+ST+GEIKLP+  D F
Sbjct: 136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166

[Close]

BLAST of Carg20861 vs. TAIR10
Match: AT2G44060.1 (Late embryogenesis abundant protein, group 2)

HSP 1 Score: 88.2 bits (217), Expect = 4.8e-18
Identity = 46/154 (29.87%), Postives = 83/154 (53.90%), Query Frame = 0


Query: 3   GLIDRAKNYVS------TKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIP 62
           G +D+ K+++              KP A V+ +   +++ +  + +  V V NP    IP
Sbjct: 41  GFLDKVKDFIHDIGEKLEGTIGFGKPTADVSAIHIPKINLERADIVVDVLVKNPNPVPIP 100

Query: 63  ICEISYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDY 122
           + +++Y ++SDGR +V+G +PD G+LKA G   V++ + + +  + S   DI     I Y
Sbjct: 101 LIDVNYLVESDGRKLVSGLIPDAGTLKAHGEETVKIPLTLIYDDIKSTYNDINPGMIIPY 160

Query: 123 ELLIGLTIDLPVIGDFTIPLSTKGEIKLPTFSDM 151
            + + L +D+PV+G  T+PL   GEI +P   D+
Sbjct: 161 RIKVDLIVDVPVLGRLTLPLEKCGEIPIPKKPDV 194

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BLAST of Carg20861 vs. Swiss-Prot
Match: sp|P46519|LEA14_SOYBN (Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 5.1e-62
Identity = 115/151 (76.16%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           M+ L+D+AKNYV+ KV NMPKPEASVTDVDFKR+SRDSVEYLA VSVSNPYS  IPICEI
Sbjct: 1   MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
            Y+LKS G+ + +GT+PDPGSLKAS +TM++V VKVPHS+++SLAKDIG DWDIDY+L +
Sbjct: 61  KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLS KGEIKLPT SDMF
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 151

[Close]

BLAST of Carg20861 vs. Swiss-Prot
Match: sp|P46518|LEA14_GOSHI (Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA14-A PE=2 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 1.9e-56
Identity = 103/151 (68.21%), Postives = 131/151 (86.75%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           M+ L+++AK++V  KVAN+ KPEASV+DVD K +SR+ VEY A VSVSNPYSH+IPICEI
Sbjct: 1   MSQLLEKAKDFVVDKVANIKKPEASVSDVDLKHVSRECVEYGAKVSVSNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SYN +S GR + +GT+PDPGSLKAS +TM++V VKVP+++++SL KDIG DWDIDYEL +
Sbjct: 61  SYNFRSAGRGIASGTIPDPGSLKASDTTMLDVPVKVPYNILVSLVKDIGADWDIDYELEL 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLP++G+FTIPLS KGEIKLPT SD+F
Sbjct: 121 GLTIDLPIVGNFTIPLSQKGEIKLPTLSDIF 151

[Close]

BLAST of Carg20861 vs. Swiss-Prot
Match: sp|O03983|LEA14_ARATH (Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LEA14 PE=1 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 4.4e-53
Identity = 97/151 (64.24%), Postives = 124/151 (82.12%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+D+AK++V+ K+  +PKPE SVTDVD K ++RDSVEYLA VSV+NPYSH+IPICEI
Sbjct: 1   MASLLDKAKDFVADKLTAIPKPEGSVTDVDLKDVNRDSVEYLAKVSVTNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           S+   S GR +  G +PDPGSLKA   T +++ V VP+S++ +LA+D+G DWDIDYEL I
Sbjct: 61  SFTFHSAGREIGKGKIPDPGSLKAKDMTALDIPVVVPYSILFNLARDVGVDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLTIDLPV+G+FTIP+S+KGEIKLPTF D F
Sbjct: 121 GLTIDLPVVGEFTIPISSKGEIKLPTFKDFF 151

[Close]

BLAST of Carg20861 vs. Swiss-Prot
Match: sp|O82355|LEA2R_ARATH (Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g46140 PE=1 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 9.4e-48
Identity = 89/151 (58.94%), Postives = 121/151 (80.13%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           ++ L+D+AK + + K+AN+P PEA+V DVDFK ++RD V+Y A VSV NPYS +IPIC+I
Sbjct: 16  ISSLLDKAKGFFAEKLANIPTPEATVDDVDFKGVTRDGVDYHAKVSVKNPYSQSIPICQI 75

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKS  R++ +GT+PDPGSL  SG+T+++V VKV +S+ +SL KD+  DWDIDY+L I
Sbjct: 76  SYILKSATRTIASGTIPDPGSLVGSGTTVLDVPVKVAYSIAVSLMKDMCTDWDIDYQLDI 135

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GLT D+PV+GD TIP+ST+GEIKLP+  D F
Sbjct: 136 GLTFDIPVVGDITIPVSTQGEIKLPSLRDFF 166

[Close]

BLAST of Carg20861 vs. Swiss-Prot
Match: sp|P22241|DRPD_CRAPL (Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 SV=1)

HSP 1 Score: 186.8 bits (473), Expect = 1.8e-46
Identity = 90/151 (59.60%), Postives = 115/151 (76.16%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+++AKN+V+ KVAN+ KP+ASV DVD K + R  + YL  + V NPYS +IP+ EI
Sbjct: 1   MAQLMNKAKNFVAEKVANVEKPKASVEDVDLKDVGRHGITYLTRICVENPYSASIPVGEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
            Y LKS GR +V+G +PDPGSLK +  TM+E  +KVPHS ++SL KDIG D DIDY L +
Sbjct: 61  KYTLKSAGRVIVSGNIPDPGSLKGNDKTMLEPAIKVPHSALVSLIKDIGADMDIDYVLEL 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL +DLPVIG+FTIPLS KGE+KLP  SD+F
Sbjct: 121 GLVVDLPVIGNFTIPLSHKGEMKLPGLSDIF 151

[Close]

BLAST of Carg20861 vs. TrEMBL
Match: tr|A0A1S3AVW5|A0A1S3AVW5_CUCME (desiccation protectant protein Lea14 homolog OS=Cucumis melo OX=3656 GN=LOC103483241 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 1.9e-61
Identity = 121/151 (80.13%), Postives = 135/151 (89.40%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+D+A +YVS KVANMPKPEASVT+VD K +S  SVEYLA VSVSNPYSH+IPICEI
Sbjct: 1   MANLVDKAMDYVSEKVANMPKPEASVTNVDLKGISFGSVEYLANVSVSNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY+LKSDGR + TG VPDPGSLKAS STM++VGV VPHSV+ISLA+DIGRDWDIDYEL I
Sbjct: 61  SYSLKSDGRVIATGKVPDPGSLKASDSTMLDVGVNVPHSVLISLARDIGRDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLSTKGEIKLPT SD+F
Sbjct: 121 GLVIDLPVIGNFTIPLSTKGEIKLPTMSDVF 151

[Close]

BLAST of Carg20861 vs. TrEMBL
Match: tr|A0A0A0L3C1|A0A0A0L3C1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121560 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 1.2e-60
Identity = 121/151 (80.13%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+D+A NYVS KVANMPKPEASVT+VD K LS  SVEYLA VSV+NPYSH+IPICEI
Sbjct: 1   MANLVDKAMNYVSEKVANMPKPEASVTNVDLKGLSFGSVEYLANVSVTNPYSHSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
           SY LKSDGR + TG VPDPGSLKAS STM++V V VPHSV+ISLA+DIGRDWDIDYEL I
Sbjct: 61  SYILKSDGRDIATGKVPDPGSLKASDSTMLDVVVNVPHSVLISLARDIGRDWDIDYELQI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLSTKGEIKLPT SD+F
Sbjct: 121 GLVIDLPVIGNFTIPLSTKGEIKLPTMSDVF 151

[Close]

BLAST of Carg20861 vs. TrEMBL
Match: tr|C6T430|C6T430_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=547837 PE=2 SV=1)

HSP 1 Score: 239.6 bits (610), Expect = 4.7e-60
Identity = 116/151 (76.82%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           MA L+D+AKNYV+ KV NMPKPEASVTDVDFKR+SRDSVEYLA VSVSNPYS  IPICEI
Sbjct: 1   MAELLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
            Y+LKS G+ + +GT+PDPGSLKAS +TM++V VKVPHS+++SLAKDIG DWDIDY+L +
Sbjct: 61  KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLS KGEIKLPT SDMF
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 151

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BLAST of Carg20861 vs. TrEMBL
Match: tr|C6T1L4|C6T1L4_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=547837 PE=2 SV=1)

HSP 1 Score: 238.4 bits (607), Expect = 1.0e-59
Identity = 115/151 (76.16%), Postives = 134/151 (88.74%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           M+ L+D+AKNYV+ KV NMPKPEASVTDVDFKR+SRDSVEYLA VSVSNPYS  IPICEI
Sbjct: 25  MSQLLDKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVSNPYSTPIPICEI 84

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
            Y+LKS G+ + +GT+PDPGSLKAS +TM++V VKVPHS+++SLAKDIG DWDIDY+L +
Sbjct: 85  KYSLKSAGKEIASGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDL 144

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLS KGEIKLPT SDMF
Sbjct: 145 GLVIDLPVIGNFTIPLSQKGEIKLPTLSDMF 175

[Close]

BLAST of Carg20861 vs. TrEMBL
Match: tr|C6TI71|C6TI71_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1)

HSP 1 Score: 236.5 bits (602), Expect = 3.9e-59
Identity = 114/151 (75.50%), Postives = 133/151 (88.08%), Query Frame = 0


Query: 1   MAGLIDRAKNYVSTKVANMPKPEASVTDVDFKRLSRDSVEYLAYVSVSNPYSHAIPICEI 60
           M+ L+++AKNYV+ KV NMPKPEASVTDVDFKR+SRDSVEYLA VSV NPYS +IPICEI
Sbjct: 1   MSQLLEKAKNYVAEKVTNMPKPEASVTDVDFKRVSRDSVEYLAKVSVQNPYSTSIPICEI 60

Query: 61  SYNLKSDGRSVVTGTVPDPGSLKASGSTMVEVGVKVPHSVMISLAKDIGRDWDIDYELLI 120
            Y+LKS GR +  GT+PDPGSLKAS +TM++V VKVPHS+++SLAKDIG DWDIDY+L I
Sbjct: 61  KYSLKSAGREIAAGTIPDPGSLKASDTTMLDVPVKVPHSILLSLAKDIGADWDIDYQLDI 120

Query: 121 GLTIDLPVIGDFTIPLSTKGEIKLPTFSDMF 152
           GL IDLPVIG+FTIPLS KGEIKLPT +DMF
Sbjct: 121 GLVIDLPVIGNFTIPLSQKGEIKLPTLTDMF 151

The following BLAST results are available for this feature:

BLAST of Carg20861 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022933415.1	8.9e-79	100.00	desiccation protectant protein Lea14 homolog [Cucurbita moschata]	[more]
XP_022974652.1	1.7e-77	98.68	desiccation protectant protein Lea14 homolog [Cucurbita maxima] >XP_022975028.1 ...	[more]
XP_022147435.1	4.3e-65	82.78	desiccation protectant protein Lea14 homolog [Momordica charantia]	[more]
XP_022979582.1	2.8e-64	84.11	desiccation protectant protein Lea14 homolog [Cucurbita maxima]	[more]
XP_022924605.1	4.7e-64	83.44	desiccation protectant protein Lea14 homolog [Cucurbita moschata] >XP_022924606....	[more]

BLAST of Carg20861 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G01470.1	2.4e-54	64.24	Late embryogenesis abundant protein	[more]
AT2G46140.1	5.2e-49	58.94	Late embryogenesis abundant protein	[more]
AT2G44060.1	4.8e-18	29.87	Late embryogenesis abundant protein, group 2	[more]

BLAST of Carg20861 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|P46519\|LEA14_SOYBN	5.1e-62	76.16	Desiccation protectant protein Lea14 homolog OS=Glycine max OX=3847 PE=2 SV=1	[more]
sp\|P46518\|LEA14_GOSHI	1.9e-56	68.21	Late embryogenesis abundant protein Lea14-A OS=Gossypium hirsutum OX=3635 GN=LEA...	[more]
sp\|O03983\|LEA14_ARATH	4.4e-53	64.24	Probable desiccation-related protein LEA14 OS=Arabidopsis thaliana OX=3702 GN=LE...	[more]
sp\|O82355\|LEA2R_ARATH	9.4e-48	58.94	Desiccation-related protein At2g46140 OS=Arabidopsis thaliana OX=3702 GN=At2g461...	[more]
sp\|P22241\|DRPD_CRAPL	1.8e-46	59.60	Desiccation-related protein PCC27-45 OS=Craterostigma plantagineum OX=4153 PE=2 ...	[more]

BLAST of Carg20861 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3AVW5\|A0A1S3AVW5_CUCME	1.9e-61	80.13	desiccation protectant protein Lea14 homolog OS=Cucumis melo OX=3656 GN=LOC10348...	[more]
tr\|A0A0A0L3C1\|A0A0A0L3C1_CUCSA	1.2e-60	80.13	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G121560 PE=4 SV=1	[more]
tr\|C6T430\|C6T430_SOYBN	4.7e-60	76.82	Uncharacterized protein OS=Glycine max OX=3847 GN=547837 PE=2 SV=1	[more]
tr\|C6T1L4\|C6T1L4_SOYBN	1.0e-59	76.16	Uncharacterized protein OS=Glycine max OX=3847 GN=547837 PE=2 SV=1	[more]
tr\|C6TI71\|C6TI71_SOYBN	3.9e-59	75.50	Uncharacterized protein OS=Glycine max OX=3847 PE=2 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Biological Process**
Term	Definition
GO:0009269	response to desiccation

Vocabulary: **INTERPRO**
Term	Definition
IPR004864	LEA_2
IPR013990	WHy-dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009269	response to desiccation
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20861-RA	Carg20861-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013990	Water stress and hypersensitive response domain	SMART	SM00769	why	coord: 24..141 e-value: 5.2E-33 score: 125.6
IPR004864	Late embryogenesis abundant protein, LEA_2 subgroup	PFAM	PF03168	LEA_2	coord: 45..140 e-value: 1.9E-16 score: 60.3
None	No IPR available	GENE3D	G3DSA:2.60.40.1820		coord: 1..151 e-value: 2.8E-61 score: 207.5
None	No IPR available	PANTHER	PTHR31459	FAMILY NOT NAMED	coord: 1..152
None	No IPR available	PANTHER	PTHR31459:SF3	DESICCATION-RELATED PROTEIN LEA14-RELATED	coord: 1..152
None	No IPR available	PRODOM	PD010978		coord: 5..151 e-value: 7.0E-63 score: 606.0
None	No IPR available	SUPERFAMILY	SSF117070	LEA14-like	coord: 4..150

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20861	Cla021202	Watermelon (97103) v1	carwmB0992
Carg20861	Csa3G121560	Cucumber (Chinese Long) v2	carcuB1007
Carg20861	MELO3C006079	Melon (DHL92) v3.5.1	carmeB0968
Carg20861	ClCG05G001200	Watermelon (Charleston Gray)	carwcgB0968
Carg20861	CSPI03G08470	Wild cucumber (PI 183967)	carcpiB1031
Carg20861	Cucsa.258720	Cucumber (Gy14) v1	carcgyB1110
Carg20861	CmaCh06G010220	Cucurbita maxima (Rimu)	carcmaB1375
Carg20861	CmaCh14G020690	Cucurbita maxima (Rimu)	carcmaB1373
Carg20861	CmaCh00G003420	Cucurbita maxima (Rimu)	carcmaB1372
Carg20861	CmoCh14G021280	Cucurbita moschata (Rifu)	carcmoB1330
Carg20861	CmoCh06G010790	Cucurbita moschata (Rifu)	carcmoB1332
Carg20861	Lsi05G020740	Bottle gourd (USVL1VR-Ls)	carlsiB907
Carg20861	Cp4.1LG03g16530	Cucurbita pepo (Zucchini)	carcpeB1379
Carg20861	Cp4.1LG08g01240	Cucurbita pepo (Zucchini)	carcpeB1380
Carg20861	CsGy3G008570	Cucumber (Gy14) v2	carcgybB0980
Carg20861	MELO3C006079.2	Melon (DHL92) v3.6.1	carmedB0978
Carg20861	CsaV3_3G008590	Cucumber (Chinese Long) v3	carcucB1037
Carg20861	Cla97C05G081520	Watermelon (97103) v2	carwmbB1047

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20861	Carg20975	Silver-seed gourd	carcarB477

The following block(s) are covering this gene:

None