Carg20835 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20835
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AT-hook motif nuclear-localized protein 3-like
Location	Cucurbita_argyrosperma_scaffold_153 : 254825 .. 259868 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GTGAGTTTGTGTTGTTTTGCTTTTGAACCGATCTTTTTTCTTTCTGTCACTGTAAAAATGGAGGAGAAAGAGGGAGTGGATTTTGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTCGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCCGCCGCCGCAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGAAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCTATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTATATTTGAGATCATTTGATGATTTGAAATTCTGTTATGGCGGTCTTGTGTTCTCTCTCTCTGTCTCTCTCTGTCTCTCTCTCTCTTTAATTGTGAGAATCTCCGTACTTGTAGGAAAGATAAGAGGGGTCCGTGTAGTTATATTTGGTGTAGAAAGTGATGGTTTTAAACGTATTTTTTTGGATTTTGTACAGTAGAATCACGAGGGAATGTTTGTTGGGTCTTGATGTGATAGTGATTTCTCTTCAGATCTGCTGTAAATAGTAATTTATGAATCAAAAGTGACTTTGGAGCCTTCTGGAAAATCGATGAACTTTCTCCCTAGGATAGAATAGCCTTTGAGAACATAGCCATTGTTTGTCTGGATCTGGAGAATCTAGACTGAGTGAAGTTTCCAAATTGGCTGCTTATGATAATCAATGGAAAATGGAAGGAAAATTCAGGGAGCAGCATTATTATGAAGTGTTGGTTTAACTTGAAAGTGGATGAAGTGTAGGTATCGGAATATTAGTTTGTTGAAAGTAAATAATTGAAACAATGCTTGGTAGCTCTGTTCTTCATCATTTTTCCCTTTTTCTGCTTCCTTTAATGGAAAATTGAAGTTTAATGCCATGAAAACAGAGTATGGAGTAACAGAGGATAAGATCTCCTCTTTTAAGACTCTAAAAGTTACAGGTCATTGATGGTTTTTTAAGTCCAAGTGTGGATGTTCGCTGATATGACGTCCAGCTAAACGTTTGAACTCTTAACCATTTACATTTTAAACTAGATTCGAGAGATTCATGATATGGGATCTTAATGCATATAGATACAAATGGTCTTATGAGAGAAAAAAAGTCCTACCCTTTTTGGCTGGTTATGTGCGAGGATTTGAACCCTTGAAATTGTGGTTCGTAGCCACGTGCTCTAATCCTTTGAGCTACTGGTCCCACTTCGTCTCCATTGGATTGTTTCCAAGGGTACTCTTAAAAAAGGAATCTTTCCTCTCTCTAGACAATTTGCCATTTCGGGTTAAGAAGATGTCAAAATGCCTCTCTCTGCTTTATTTGATTTTGTTACTCATGCTTAATCAAAAGTGTGGTTGTTTTTAGGATTTGGGTCCGGTATTCACTCAATGGAATTATTTGTTGGACATTCTCGAGATAATAGTTAGGATATGGTTCTTATGAAGGTTTATAAAAAAAAAAAAAAAGCATCAAAATATATTCAGGAAGAGTTACTTGACAAGATTTTTTTTGTCTCTCTTTAAGGGTCATATTAACGTTGACACGAGAAGTTAGGGGGCTTGGATTATTGGATTTTTTCTTTTATTGAAAATTTGAAATGATATTTTCAGGTAATATGTTCTTGGTTTTTCTTGAAATTTATGCTGATTTTTGTCATGGTAAATGAGAATATTTAAAAAGAAATATTGAACAGTACGATCATTATTTAATGGGTATGGTTGTAACTGATGTCATGAATTAATTTTAAAAGTCTGGCCATGCAATTTTAATATAAATGAAGAAACTTCATTTCATTTCTAAGTGGTTCTTACATAATGCATCTGTTACTCAGGTAACAAGGTTGCCTTCATTGCTGGAGCAGATTTCACACCTCACGTGATCACTGTTAATATTGGTGAGGTAAGCCTTGGAATCCCTCGCCAAGAGGCATCTATTCTGTCATCAGGGAATAAGTCTTGTATCAAATAATAATAGGTTAGCTAAATGATTGGAGAAGTGGAATAAAACATTCCTTATAAGGGTGTGAAAACCTCTTCCTAGCGTTTTAAAACTGTGAGGCTGATGGCGGTACGTAACGTGCCAAAGCGAACAATGTCTGCTAACGGTGGACTTGGTCTGTTACAAATAGTATCAGAGCCAGACACTGAGCTATGTGCCAGTGAGGATGTTGGGCCCTCCCAAAGAGGGTGGATTGTGAGATCACACATCGGTTGGAGAGGGGAACGAAGCATTCCTTGTAAGAGTGTGGAAACCTCCCCTAGTAGACGTGTTTTATAACCGTGAGGCCGATGGCTATATGTAATAGGCCAACGCGAACAATATCTGCTAATGGTGGGCTTGGGCTGTTACAAATGATCTCTTTTAACTCCTATTTGTTCTTAATGCCTAGTTGCCAATTGTTCCTAACGCCCATTTCCTGCCGTTTTAGGATGTTAACTTGAAAATCATGTCATTTTCTCAACAAGGATCTCGGGCAATTTTTATACTCTCTGCTAATGGTATGGTTTCGAATGTTACACTTCGGCAGTCAACATCTTCTGGGGGCACGCTAACGTATGAGGTAGGTCGTCGCCTTCCTTGATATACATACCATCTAAGCTCCTCTATATTGATGAATTTGAAGTCTATAGGTCTGCAAAATGCATCTTCTATATGATGAAGGCATGTTTGATCTTATTGCTCATCCCACACTTTATTTCTAATTCAAATGTCTGACTGCAGTAAGATCTGATTGTTTTGTTTCCCATGTCATTTTTTATGCATGCTCATTGACACTTGAGGATAATATACTTCTTGTACTGTTTGCATTTGACCAAGTTGAATATTTTTCTTTTATCTTCTGGAATACACCTTCAAAACATTTGAAATGATCTTGATGCTAGTTGTCTTGTACAAATACTCAAATCAACTGTTTTTCGGCTGGGATCGATTTATTGCTTGCTTGTTTCGCCCGTCCTGTCTCATGTCAATAAATAAGTAAAATGGTAGCTTTCCAGAATCAGTCTCACATTTTGACTTAGAATTTCGAACCATATATAGCCATAAGTTCTTTTTCAGCAAATGTATAGGAATTTTGAGAAAGAACTGAAATTTTGCACATGTTCATACAAGAGAAAATCACTGGCAAAGTTGGGCCTATTTGGTAGGCAATCTGGATTTTGTTTTATGTTTCATTTAGTAAGCAATCTAGATTCTGTTGATTAAAACTATTTTTGGATTTTGTGATCTAGATTTTGAATTTAAAATTTTAAAATGCAGGATAATGTTAAAAAAAGATAAAAATGTTAATAAATATAGTATTTCATGTTATAAATAATTTATTCATGTTAAATTAAAATATTGATTATACAAAATAGTTATCACACAGTTTTTTGTAACTTAAAACATGTTCATAAATATATTAATAATTGTTTAGTGGGCAATTATGACTAGTTTTATGGTTTATAGATATATTATTTCATACAATTTAAACAATAGAATCCTCCCCTTAATCGAGGCTCGACTCCTTTCTTTGGAGCCCTGGAACAAAGTACACCATTTGTTCGACACTTTAGTCACTTTTGACTACACATTTGAGACTCACAATTCTTTGTTCGATATTTGAGGATTCTATTGACATAGTTAAATTTAGGGAGACATAGTTTAGGGCGTGGCTTTGATACCATGTTATGAATCACCACTCTCCATAATGGTATGATATTGTCCAATTTGAGCATAGGCTCTCATGTCTTTGCTTTGGACTTACCCATAGCATAAGCTCTCATGTCTTTGCTTTGGACTTCCCCAAAAGGACCAATGGAGATAGTATTCCCCACTTGTAAACTCATGATCTTCCACTAAATTAACCAATGTGGGACTCACTCCCAATAATCCTCGACAATTATGGCTAGTTTTATGGTTTATAGATATATTATTTCATACAATTTAAACAATTGTTTAAATTGGAATTCAACTCTTGAATCTTCCACCAAATACAGAACATGAAATTCAGATAGTTTATTACTTCTCCTTCATATATTGAGTTCTTTTTCATTTAAACAACTATGATTATGAGATCCCACGTCGGTTGGGGGAACAAAACATTCTTTACAAGAGTGTGAAAATCTCTCATTAATAGACGCATTTTAAAAACCTTGAGGGAAAACTTGTAAGGAAAAGCCCAAAGAGGACAATATCTGCTAGCGGTGCGTTTGGGTTGTTAAAACGATTGTCTCAAATGTTACTTGTTATTGTTAGCCGCTCTATGCAAATGTATCCCTGCATCTTATCAACTGTCATGGTAGAACATCCTGATCTGTTCTTGATTATTAGGGTCGATTTGAGATACTTTCGTTGTCTGGATCATATATGCCTTCTGAGAGCAGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTACAGGTATCATTTTCTCCATCTCCATATGAGTTAGTACAACTTTTATGTTAGTGCATATGAATATAATTCTAAACCATCAGCTTCAGTATCAATTTGTTCAATACAAAGTATTACTGTATAACTACATGATCACAGGTGGTGGTGGGCAGTTTCCTACCCCCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAATGCAATTTTACCTCCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAATTGAAGATAAACCAACCTCTTTAGACCAAAATCCAGCTTCTAAAACTCCACAAGTCAACGAAAAGTTACCATTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA

mRNA sequence

GTGAGTTTGTGTTGTTTTGCTTTTGAACCGATCTTTTTTCTTTCTGTCACTGTAAAAATGGAGGAGAAAGAGGGAGTGGATTTTGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTCGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCCGCCGCCGCAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGAAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCTATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTAACAAGGTTGCCTTCATTGCTGGAGCAGATTTCACACCTCACTCAACATCTTCTGGGGGCACGCTAACGTATGAGGGTCGATTTGAGATACTTTCGTTGTCTGGATCATATATGCCTTCTGAGAGCAGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTACAGGTGGTGGTGGGCAGTTTCCTACCCCCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAATGCAATTTTACCTCCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAATTGAAGATAAACCAACCTCTTTAGACCAAAATCCAGCTTCTAAAACTCCACAAGTCAACGAAAAGTTACCATTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA

Coding sequence (CDS)

GTGAGTTTGTGTTGTTTTGCTTTTGAACCGATCTTTTTTCTTTCTGTCACTGTAAAAATGGAGGAGAAAGAGGGAGTGGATTTTGGATTTGCAGTAGAAGTGAGCCAAGCTCCAGAGAGCTTAGGAATGATGGATTCGAGACCTGAAAATACAAGCACAGATAGTGAGTCACCGCCGCCGCCGCCGCCGCAGCCGCTGGCGAGTGTTCCAACGGTGGCGGCTACAGATGGGAAGAAGAAAAGAGGAAGGCCGAGAAAGTACGGTCCCAATGGGACTGTAGCTCCAACTTTGTCGCCAATGCCGATTTCGTCTTCTATTCCGCTGAGTGGAGAATTTCCGGTTTGGAAACGGGGAAGAGGGCGGTCAGTAGAGTCGATTAAGAAGCCGCGACGAGGGTACGAATTTGAGATTCCAGGTAACAAGGTTGCCTTCATTGCTGGAGCAGATTTCACACCTCACTCAACATCTTCTGGGGGCACGCTAACGTATGAGGGTCGATTTGAGATACTTTCGTTGTCTGGATCATATATGCCTTCTGAGAGCAGTGGAACAAAGAGCCGATCTCGAGGGGTGAGTGTTTCTTTGGCTGGCTCAGATGGCCGAGTGATGGGTGGAGAACTTGCCGGCATGCTGATAGCAGCTGGTCCAGTACAGGTGGTGGTGGGCAGTTTCCTACCCCCAGTTCACCAGAAGGAACATAAACCAAAGAAGAGTAGGATGGAACCTAAATCGAATGCAATTTTACCTCCAGCCGATGTTCTTTCTGGCGAAGGGACGAACGGAGTCCTTGGCGGAGTGGAGGCCATAGTCCCATCTACTCTAATTGAAGATAAACCAACCTCTTTAGACCAAAATCCAGCTTCTAAAACTCCACAAGTCAACGAAAAGTTACCATTTCCACAAGAATCAAGAGGTGTACTCAACCATTCAAACCATGAGGTTTCTTGTTGA

Protein sequence

VSLCCFAFEPIFFLSVTVKMEEKEGVDFGFAVEVSQAPESLGMMDSRPENTSTDSESPPPPPPQPLASVPTVAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPGNKVAFIAGADFTPHSTSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDKPTSLDQNPASKTPQVNEKLPFPQESRGVLNHSNHEVSC

Homology

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BLAST of Carg20835 vs. NCBI nr
Match: XP_022928888.1 (AT-hook motif nuclear-localized protein 3-like [Cucurbita moschata])

HSP 1 Score: 524.6 bits (1350), Expect = 2.3e-145
Identity = 295/338 (87.28%), Postives = 295/338 (87.28%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGKK 79
           MEEKEGVDFGFAVEVSQAPESLGMMDSRPENT XXXXXXXXXXXXXX SVPTVAATDGKK
Sbjct: 1   MEEKEGVDFGFAVEVSQAPESLGMMDSRPENT-XXXXXXXXXXXXXXASVPTVAATDGKK 60

Query: 80  KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG 139
           KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG
Sbjct: 61  KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG 120

Query: 140 NKVAFIAGADFTPH-----------------------------------------STSSG 199
           NKVAFIAGADFTPH                                         STSSG
Sbjct: 121 NKVAFIAGADFTPHVITVNIGEDVNLKIMSFSQQGSRAIFILSANGMVSNVTLRQSTSSG 180

Query: 200 GTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ 259
           GTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ
Sbjct: 181 GTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ 240

Query: 260 VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDK 317
           VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDK
Sbjct: 241 VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDK 300

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BLAST of Carg20835 vs. NCBI nr
Match: XP_023550576.1 (AT-hook motif nuclear-localized protein 3-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 516.9 bits (1330), Expect = 4.8e-143
Identity = 277/338 (81.95%), Postives = 277/338 (81.95%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGKK 79
           MEEKEGVDFGFAVEVSQAPESLGMMDSRPENT                SVPTVAATDGKK
Sbjct: 1   MEEKEGVDFGFAVEVSQAPESLGMMDSRPENT---STDSESPPPQPLASVPTVAATDGKK 60

Query: 80  KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG 139
           KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG
Sbjct: 61  KRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIPG 120

Query: 140 NKVAFIAGADFTPH-----------------------------------------STSSG 199
           NKVAFIAGADFTPH                                         STSSG
Sbjct: 121 NKVAFIAGADFTPHVITVNIGEDVNLKIMSFSQQGSRAIFILSANGMVSNVTLRQSTSSG 180

Query: 200 GTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ 259
           GTLTYEGRFEILSLSGSYMPSES GTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ
Sbjct: 181 GTLTYEGRFEILSLSGSYMPSESGGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQ 240

Query: 260 VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIEDK 317
           VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTL EDK
Sbjct: 241 VVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLTEDK 300

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BLAST of Carg20835 vs. NCBI nr
Match: XP_022969936.1 (AT-hook motif nuclear-localized protein 3-like [Cucurbita maxima])

HSP 1 Score: 512.3 bits (1318), Expect = 1.2e-141
Identity = 290/343 (84.55%), Postives = 290/343 (84.55%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENT-----XXXXXXXXXXXXXXXXSVPTVAA 79
           MEEKEGVDFGFAVEVSQAPESLGMMD RPENT     XXXXXXXXXXXXXX  SVPTVAA
Sbjct: 1   MEEKEGVDFGFAVEVSQAPESLGMMDLRPENTXXXXXXXXXXXXXXXXXXXLASVPTVAA 60

Query: 80  TDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYE 139
           TDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYE
Sbjct: 61  TDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYE 120

Query: 140 FEIPGNKVAFIAGADFTPH----------------------------------------- 199
           FEIPGNKVAFIAGADFTPH                                         
Sbjct: 121 FEIPGNKVAFIAGADFTPHVITVNIGEDVNLKIMSFSQQGSRAIFILSANGMVSNVTLRQ 180

Query: 200 STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIA 259
           STSSGGTLTYEGRFEILSLSGSYMPSES GTKSRSRGVSVSLAGSDGRVMGGELAG LIA
Sbjct: 181 STSSGGTLTYEGRFEILSLSGSYMPSESGGTKSRSRGVSVSLAGSDGRVMGGELAGRLIA 240

Query: 260 AGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPST 317
           AGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPST
Sbjct: 241 AGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPST 300

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BLAST of Carg20835 vs. NCBI nr
Match: XP_008467286.1 (PREDICTED: AT-hook motif nuclear-localized protein 3-like [Cucumis melo])

HSP 1 Score: 420.2 bits (1079), Expect = 6.1e-114
Identity = 234/339 (69.03%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 20  MEEKE-GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGK 79
           MEEKE GVDFGFAV+VSQAPES GMMDSRPEN+                SVP+  A DGK
Sbjct: 1   MEEKEGGVDFGFAVKVSQAPESFGMMDSRPENS---STDGETPPQQPPASVPSAGAADGK 60

Query: 80  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIP 139
           KKRGRPRKYGP+GTVAPTLSPMPISSSIPL GEF  WKRGRGRSVESIKK R+ +E+EIP
Sbjct: 61  KKRGRPRKYGPDGTVAPTLSPMPISSSIPLPGEFAGWKRGRGRSVESIKKSRK-FEYEIP 120

Query: 140 GNKVAFIAGADFTPH-----------------------------------------STSS 199
           GNKVAF AGADFTPH                                         STSS
Sbjct: 121 GNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSS 180

Query: 200 GGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPV 259
           GGTLTYEGRFEILSLSGSYMPSE  GTKSRS G+SVSLAG DGRVMGG LAGMLIAAGPV
Sbjct: 181 GGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPV 240

Query: 260 QVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIED 317
           QVVVGSFLPP HQ+E+KP+KSRMEP  NAI PPAD+LSGEGT  V GGV+ IVPSTL  D
Sbjct: 241 QVVVGSFLPPGHQQENKPRKSRMEPTLNAISPPADILSGEGTKEVFGGVKPIVPSTLNGD 300

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BLAST of Carg20835 vs. NCBI nr
Match: XP_004143720.1 (PREDICTED: AT-hook motif nuclear-localized protein 3 [Cucumis sativus] >KGN50374.1 hypothetical protein Csa_5G169100 [Cucumis sativus])

HSP 1 Score: 411.8 bits (1057), Expect = 2.2e-111
Identity = 232/339 (68.44%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 20  MEEKE-GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGK 79
           MEEKE GVDFGFAV+VSQAPES GMMD+RPEN+                SVPT  A DGK
Sbjct: 1   MEEKEGGVDFGFAVKVSQAPESFGMMDTRPENS---STDGETPPQQPPASVPTAGAADGK 60

Query: 80  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIP 139
           KKRGRPRKYGP+GTVAPTLSPMPISSSIPL+GEF  WKRGRGRSVESIKK R+ +E+EIP
Sbjct: 61  KKRGRPRKYGPDGTVAPTLSPMPISSSIPLAGEFAGWKRGRGRSVESIKKSRK-FEYEIP 120

Query: 140 GNKVAFIAGADFTPH-----------------------------------------STSS 199
           GNKVAF AGADFTPH                                         STSS
Sbjct: 121 GNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSS 180

Query: 200 GGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPV 259
           GGTLTYEGRFEILSLSGSYMPSE  GTKSRS G+SVSLAG DGRVMGG LAGMLIAAGPV
Sbjct: 181 GGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPV 240

Query: 260 QVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIED 317
           QVVVGSFLPP HQ+E+KP+KSRMEP  NA  PPA++LSGEGTN V GGV+ IV STL  D
Sbjct: 241 QVVVGSFLPPGHQQENKPRKSRMEPTLNASSPPANILSGEGTNEVFGGVKPIVASTLNGD 300

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BLAST of Carg20835 vs. TAIR10
Match: AT4G25320.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 159.5 bits (402), Expect = 3.5e-39
Identity = 101/223 (45.29%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 68  SVPT--VAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVES 127
           ++PT   +A   KKKRGRPRKY P+GT+  TLSPMPISSS+PL+ EFP  KRGRGR   +
Sbjct: 74  TMPTENTSAEQLKKKRGRPRKYNPDGTLVVTLSPMPISSSVPLTSEFPPRKRGRGRGKSN 133

Query: 128 --IKK------PRRGYEFEIPGNKVAFIAGADFTPH------------------------ 187
             +KK       R   +  + G   A   GA+FTPH                        
Sbjct: 134 RWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRA 193

Query: 188 -----------------STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLA 240
                            S +SGGTLTYEGRFEILSL+GS+M ++S GT+SR+ G+SV LA
Sbjct: 194 ICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLA 253

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BLAST of Carg20835 vs. TAIR10
Match: AT5G62260.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 142.5 bits (358), Expect = 4.4e-34
Identity = 93/210 (44.29%), Postives = 121/210 (57.62%), Query Frame = 0


Query: 83  RPRKYGPNGT-----VAPTLSPMPISSSIPLSGEFPVWKRGRGRS----VESIKKPRRGY 142
           RPRKY P+G+     + PTLSP PISSSIPLSG++  WKRG+ +     +E +KK  + +
Sbjct: 81  RPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSGDYQ-WKRGKAQQQHQPLEFVKKSHK-F 140

Query: 143 EFEIPGNK-----VAFIAGADFTPHS---------------------------------- 202
           E+  P        ++   GA+FT H                                   
Sbjct: 141 EYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSIS 200

Query: 203 -------TSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGEL 238
                  T++GGTLTYEGRFEILSLSGS+MP+E+ GTK R+ G+S+SLAG +G + GG L
Sbjct: 201 NVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGGGL 260

[Close]

BLAST of Carg20835 vs. TAIR10
Match: AT4G22770.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 140.6 bits (353), Expect = 1.7e-33
Identity = 122/289 (42.21%), Postives = 152/289 (52.60%), Query Frame = 0


Query: 25  GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDG------K 84
           G D G  V  S AP    M      + XXXXXXXXXXXXXXXX     AA DG      K
Sbjct: 13  GSDGGVTVVRSNAPSDFHMAPRSETSXXXXXXXXXXXXXXXXXXFTPSAAMDGFSSGPIK 72

Query: 85  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSG---EFPVWKRGRGRSVESIKKP----RR 144
           K+RGRPRKYG +G  A TLSP PISS+ P +    +F      RG+   +   P    R 
Sbjct: 73  KRRGRPRKYGHDG-AAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFIRP 132

Query: 145 GYEFEIPGNKVAFIAGADFTPH-------------------------------------- 204
            Y+ E  G      A A+FTPH                                      
Sbjct: 133 KYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSVT 192

Query: 205 ---STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGM 260
                SSGGTLTYEGRFEILSLSG++MPS+S GT+SR+ G+SVSLA  DGRV+GG +AG+
Sbjct: 193 LRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGGGVAGL 252

[Close]

BLAST of Carg20835 vs. TAIR10
Match: AT4G12080.1 (AT-hook motif nuclear-localized protein 1)

HSP 1 Score: 135.6 bits (340), Expect = 5.4e-32
Identity = 101/269 (37.55%), Postives = 133/269 (49.44%), Query Frame = 0


Query: 81  RGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFP-----------VWKRGRGRSVESIKKP 140
           RGRPRKYGP+GTV   LSP PISS+ P     P             KR + +   S  + 
Sbjct: 92  RGRPRKYGPDGTVV-ALSPKPISSA-PAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRT 151

Query: 141 RRGYEFEIPGNKVAFIAGADFTPH------------------------------------ 200
           +  ++ E  G       G +FTPH                                    
Sbjct: 152 KYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISS 211

Query: 201 -----STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELA 260
                  SSGGTLTYEGRFEILSLSGS+MP++S GT+SR+ G+SVSLA  DGRV+GG LA
Sbjct: 212 VTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLA 271

Query: 261 GMLIAAGPVQVVVGSFLPPVHQKEHKPKKSR---MEPKSNAILPPADVLSGEGTNGVLGG 295
           G+L+AA PVQVVVGSFL     ++ KPKK++   M     A +P    +S    +  +  
Sbjct: 272 GLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIP----ISSAADHRTIHS 331

[Close]

BLAST of Carg20835 vs. TAIR10
Match: AT5G51590.1 (AT hook motif DNA-binding family protein)

HSP 1 Score: 134.4 bits (337), Expect = 1.2e-31
Identity = 92/223 (41.26%), Postives = 114/223 (51.12%), Query Frame = 0


Query: 73  AATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEF-------------------- 132
           ++++ KKKRGRPRKY P+G++A TLSPMPISSS+PL+ EF                    
Sbjct: 73  SSSELKKKRGRPRKYNPDGSLAVTLSPMPISSSVPLTSEFGSXXXXXXXXXXXXXXXXXX 132

Query: 133 ----PVWKRGRGRSVESIKKPRRGYEFE-----IPGNKVAFIAGADFTPH---------- 192
                            +K P+  +EF        G   A I    FTPH          
Sbjct: 133 XXXXXXXXXXXXXXXXWLKNPQM-FEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDV 192

Query: 193 -------------------------------STSSGGTLTYEGRFEILSLSGSYMPSESS 226
                                          S +SGGTLTYEG FEILSL+GS++PSES 
Sbjct: 193 TMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESG 252

[Close]

BLAST of Carg20835 vs. Swiss-Prot
Match: sp|Q9SB31|AHL3_ARATH (AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL3 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 6.3e-38
Identity = 101/223 (45.29%), Postives = 128/223 (57.40%), Query Frame = 0


Query: 68  SVPT--VAATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVES 127
           ++PT   +A   KKKRGRPRKY P+GT+  TLSPMPISSS+PL+ EFP  KRGRGR   +
Sbjct: 74  TMPTENTSAEQLKKKRGRPRKYNPDGTLVVTLSPMPISSSVPLTSEFPPRKRGRGRGKSN 133

Query: 128 --IKK------PRRGYEFEIPGNKVAFIAGADFTPH------------------------ 187
             +KK       R   +  + G   A   GA+FTPH                        
Sbjct: 134 RWLKKSQMFQFDRSPVDTNLAGVGTADFVGANFTPHVLIVNAGEDVTMKIMTFSQQGSRA 193

Query: 188 -----------------STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLA 240
                            S +SGGTLTYEGRFEILSL+GS+M ++S GT+SR+ G+SV LA
Sbjct: 194 ICILSANGPISNVTLRQSMTSGGTLTYEGRFEILSLTGSFMQNDSGGTRSRAGGMSVCLA 253

[Close]

BLAST of Carg20835 vs. Swiss-Prot
Match: sp|Q9LVB0|AHL6_ARATH (AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL6 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 8.0e-33
Identity = 93/210 (44.29%), Postives = 121/210 (57.62%), Query Frame = 0


Query: 83  RPRKYGPNGT-----VAPTLSPMPISSSIPLSGEFPVWKRGRGRS----VESIKKPRRGY 142
           RPRKY P+G+     + PTLSP PISSSIPLSG++  WKRG+ +     +E +KK  + +
Sbjct: 81  RPRKYAPDGSLNPRFLRPTLSPTPISSSIPLSGDYQ-WKRGKAQQQHQPLEFVKKSHK-F 140

Query: 143 EFEIPGNK-----VAFIAGADFTPHS---------------------------------- 202
           E+  P        ++   GA+FT H                                   
Sbjct: 141 EYGSPAPTPPLPGLSCYVGANFTTHQFTVNGGEDVTMKVMPYSQQGSRAICILSATGSIS 200

Query: 203 -------TSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGEL 238
                  T++GGTLTYEGRFEILSLSGS+MP+E+ GTK R+ G+S+SLAG +G + GG L
Sbjct: 201 NVTLGQPTNAGGTLTYEGRFEILSLSGSFMPTENGGTKGRAGGMSISLAGPNGNIFGGGL 260

[Close]

BLAST of Carg20835 vs. Swiss-Prot
Match: sp|O49658|AHL2_ARATH (AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL2 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 3.0e-32
Identity = 122/289 (42.21%), Postives = 152/289 (52.60%), Query Frame = 0


Query: 25  GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDG------K 84
           G D G  V  S AP    M      + XXXXXXXXXXXXXXXX     AA DG      K
Sbjct: 13  GSDGGVTVVRSNAPSDFHMAPRSETSXXXXXXXXXXXXXXXXXXFTPSAAMDGFSSGPIK 72

Query: 85  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSG---EFPVWKRGRGRSVESIKKP----RR 144
           K+RGRPRKYG +G  A TLSP PISS+ P +    +F      RG+   +   P    R 
Sbjct: 73  KRRGRPRKYGHDG-AAVTLSPNPISSAAPTTSHVIDFSTTSEKRGKMKPATPTPSSFIRP 132

Query: 145 GYEFEIPGNKVAFIAGADFTPH-------------------------------------- 204
            Y+ E  G      A A+FTPH                                      
Sbjct: 133 KYQVENLGEWSPSSAAANFTPHIITVNAGEDVTKRIISFSQQGSLAICVLCANGVVSSVT 192

Query: 205 ---STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGM 260
                SSGGTLTYEGRFEILSLSG++MPS+S GT+SR+ G+SVSLA  DGRV+GG +AG+
Sbjct: 193 LRQPDSSGGTLTYEGRFEILSLSGTFMPSDSDGTRSRTGGMSVSLASPDGRVVGGGVAGL 252

[Close]

BLAST of Carg20835 vs. Swiss-Prot
Match: sp|Q8VYJ2|AHL1_ARATH (AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL1 PE=1 SV=1)

HSP 1 Score: 135.6 bits (340), Expect = 9.7e-31
Identity = 101/269 (37.55%), Postives = 133/269 (49.44%), Query Frame = 0


Query: 81  RGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFP-----------VWKRGRGRSVESIKKP 140
           RGRPRKYGP+GTV   LSP PISS+ P     P             KR + +   S  + 
Sbjct: 92  RGRPRKYGPDGTVV-ALSPKPISSA-PAPSHLPPPSSHVIDFSASEKRSKVKPTNSFNRT 151

Query: 141 RRGYEFEIPGNKVAFIAGADFTPH------------------------------------ 200
           +  ++ E  G       G +FTPH                                    
Sbjct: 152 KYHHQVENLGEWAPCSVGGNFTPHIITVNTGEDVTMKIISFSQQGPRSICVLSANGVISS 211

Query: 201 -----STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELA 260
                  SSGGTLTYEGRFEILSLSGS+MP++S GT+SR+ G+SVSLA  DGRV+GG LA
Sbjct: 212 VTLRQPDSSGGTLTYEGRFEILSLSGSFMPNDSGGTRSRTGGMSVSLASPDGRVVGGGLA 271

Query: 261 GMLIAAGPVQVVVGSFLPPVHQKEHKPKKSR---MEPKSNAILPPADVLSGEGTNGVLGG 295
           G+L+AA PVQVVVGSFL     ++ KPKK++   M     A +P    +S    +  +  
Sbjct: 272 GLLVAASPVQVVVGSFLAGTDHQDQKPKKNKHDFMLSSPTAAIP----ISSAADHRTIHS 331

[Close]

BLAST of Carg20835 vs. Swiss-Prot
Match: sp|Q9FHM5|AHL4_ARATH (AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL4 PE=1 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 2.2e-30
Identity = 92/223 (41.26%), Postives = 114/223 (51.12%), Query Frame = 0


Query: 73  AATDGKKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEF-------------------- 132
           ++++ KKKRGRPRKY P+G++A TLSPMPISSS+PL+ EF                    
Sbjct: 73  SSSELKKKRGRPRKYNPDGSLAVTLSPMPISSSVPLTSEFGSXXXXXXXXXXXXXXXXXX 132

Query: 133 ----PVWKRGRGRSVESIKKPRRGYEFE-----IPGNKVAFIAGADFTPH---------- 192
                            +K P+  +EF        G   A I    FTPH          
Sbjct: 133 XXXXXXXXXXXXXXXXWLKNPQM-FEFNNNTPTSGGGGPAEIVSPSFTPHVLTVNAGEDV 192

Query: 193 -------------------------------STSSGGTLTYEGRFEILSLSGSYMPSESS 226
                                          S +SGGTLTYEG FEILSL+GS++PSES 
Sbjct: 193 TMKIMTFSQQGSRAICILSANGPISNVTLRQSMTSGGTLTYEGHFEILSLTGSFIPSESG 252

[Close]

BLAST of Carg20835 vs. TrEMBL
Match: tr|A0A1S3CTE0|A0A1S3CTE0_CUCME (AT-hook motif nuclear-localized protein 3-like OS=Cucumis melo OX=3656 GN=LOC103504671 PE=4 SV=1)

HSP 1 Score: 420.2 bits (1079), Expect = 4.0e-114
Identity = 234/339 (69.03%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 20  MEEKE-GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGK 79
           MEEKE GVDFGFAV+VSQAPES GMMDSRPEN+                SVP+  A DGK
Sbjct: 1   MEEKEGGVDFGFAVKVSQAPESFGMMDSRPENS---STDGETPPQQPPASVPSAGAADGK 60

Query: 80  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIP 139
           KKRGRPRKYGP+GTVAPTLSPMPISSSIPL GEF  WKRGRGRSVESIKK R+ +E+EIP
Sbjct: 61  KKRGRPRKYGPDGTVAPTLSPMPISSSIPLPGEFAGWKRGRGRSVESIKKSRK-FEYEIP 120

Query: 140 GNKVAFIAGADFTPH-----------------------------------------STSS 199
           GNKVAF AGADFTPH                                         STSS
Sbjct: 121 GNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSS 180

Query: 200 GGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPV 259
           GGTLTYEGRFEILSLSGSYMPSE  GTKSRS G+SVSLAG DGRVMGG LAGMLIAAGPV
Sbjct: 181 GGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPV 240

Query: 260 QVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIED 317
           QVVVGSFLPP HQ+E+KP+KSRMEP  NAI PPAD+LSGEGT  V GGV+ IVPSTL  D
Sbjct: 241 QVVVGSFLPPGHQQENKPRKSRMEPTLNAISPPADILSGEGTKEVFGGVKPIVPSTLNGD 300

[Close]

BLAST of Carg20835 vs. TrEMBL
Match: tr|A0A0A0KN92|A0A0A0KN92_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169100 PE=4 SV=1)

HSP 1 Score: 411.8 bits (1057), Expect = 1.4e-111
Identity = 232/339 (68.44%), Postives = 249/339 (73.45%), Query Frame = 0


Query: 20  MEEKE-GVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGK 79
           MEEKE GVDFGFAV+VSQAPES GMMD+RPEN+                SVPT  A DGK
Sbjct: 1   MEEKEGGVDFGFAVKVSQAPESFGMMDTRPENS---STDGETPPQQPPASVPTAGAADGK 60

Query: 80  KKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRRGYEFEIP 139
           KKRGRPRKYGP+GTVAPTLSPMPISSSIPL+GEF  WKRGRGRSVESIKK R+ +E+EIP
Sbjct: 61  KKRGRPRKYGPDGTVAPTLSPMPISSSIPLAGEFAGWKRGRGRSVESIKKSRK-FEYEIP 120

Query: 140 GNKVAFIAGADFTPH-----------------------------------------STSS 199
           GNKVAF AGADFTPH                                         STSS
Sbjct: 121 GNKVAFFAGADFTPHVITVNIGEDVNLKVMSFSQQGSRAICILSANGMVSNVTLRQSTSS 180

Query: 200 GGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPV 259
           GGTLTYEGRFEILSLSGSYMPSE  GTKSRS G+SVSLAG DGRVMGG LAGMLIAAGPV
Sbjct: 181 GGTLTYEGRFEILSLSGSYMPSEIGGTKSRSGGMSVSLAGPDGRVMGGGLAGMLIAAGPV 240

Query: 260 QVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIVPSTLIED 317
           QVVVGSFLPP HQ+E+KP+KSRMEP  NA  PPA++LSGEGTN V GGV+ IV STL  D
Sbjct: 241 QVVVGSFLPPGHQQENKPRKSRMEPTLNASSPPANILSGEGTNEVFGGVKPIVASTLNGD 300

[Close]

BLAST of Carg20835 vs. TrEMBL
Match: tr|A0A2N9GG64|A0A2N9GG64_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29409 PE=4 SV=1)

HSP 1 Score: 253.4 bits (646), Expect = 6.5e-64
Identity = 160/348 (45.98%), Postives = 197/348 (56.61%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDGKK 79
           MEEKE    G AV VS+APES  +       T                + P   +T+ KK
Sbjct: 1   MEEKESSGSGVAVTVSEAPESYRVAPRTENPTQLAGAPVIAAASPVSVAAP---STEVKK 60

Query: 80  KRGRPRKYGP--------NGTVAPTLSPMPISSSIPLSGEFPVWKRGRGRSVESIKKPRR 139
           KRGRPRKYGP        +G V+  LSPMPISSSIPL+G+F  WKRGRGR ++S+KK  +
Sbjct: 61  KRGRPRKYGPDGARAGPASGAVSLALSPMPISSSIPLTGDFSAWKRGRGRPIDSVKKSHK 120

Query: 140 GYEFEIPGNKVAFIAGADFTPH-------------------------------------- 199
             E+E PG ++A+  GA+FTPH                                      
Sbjct: 121 S-EYESPGERIAYSVGANFTPHVLTVNAGEDVTMKVMSFSQQGARAICILSANGTISNVT 180

Query: 200 ---STSSGGTLTYEGRFEILSLSGSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGM 259
               TSSGGTLTYEGRFEILSL GS+MP++S GTKSRS G+SVSLAG DGRV+GG LAG+
Sbjct: 181 LRQPTSSGGTLTYEGRFEILSLCGSFMPTDSGGTKSRSGGMSVSLAGPDGRVVGGGLAGL 240

Query: 260 LIAAGPVQVVVGSFLPPVHQKEHKPKKSRMEPKSNAILPPADVLSGEGTNGVLGGVEAIV 317
           L+AAGPVQVVVGSFLP  HQ+E KPKK R+EP S   + PA+ L  E T GV GGV+ I+
Sbjct: 241 LVAAGPVQVVVGSFLPG-HQQEQKPKKQRIEPTSTITITPANPLCDEETRGVYGGVKPII 300

[Close]

BLAST of Carg20835 vs. TrEMBL
Match: tr|A0A2P5CG23|A0A2P5CG23_9ROSA (PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_286150 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 7.9e-62
Identity = 171/384 (44.53%), Postives = 204/384 (53.12%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDG-- 79
           MEEKE    G AV   +AP+S   +  R EN+                S PT+AA     
Sbjct: 1   MEEKESSASGVAVSSEEAPDSY-RVAPRNENS------------SGQFSGPTMAAPASTA 60

Query: 80  -----------------KKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRG 139
                            KKKRGRPRKYGP+GTVA  LSPMPISSSIPL+GEF  WKRGRG
Sbjct: 61  SPXXXXXXXXXXXXXXTKKKRGRPRKYGPDGTVALALSPMPISSSIPLTGEFSAWKRGRG 120

Query: 140 RSVESIKKPRRGYE-FEIP-------------------------GNKVAFIAGADFTPH- 199
           + V+SIKK +  YE +E P                         G K+A+  GA+FTPH 
Sbjct: 121 KPVDSIKKSQNKYEAYEPPDESDFFGVKVESGSAKWGDTDWDYYGEKIAYSVGANFTPHV 180

Query: 200 ----------------------------------------STSSGGTLTYEGRFEILSLS 259
                                                    TSSGGTLTYEGRFEILSLS
Sbjct: 181 LTVNAGEDVTMKVMSFSQQGARAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLS 240

Query: 260 GSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQVVVGSFLPPVHQKEH 317
           GSYMP+E++GTKSRS G+SVSLAG DGRV+GG LAG+LIAAGPVQVVVGSFLP  HQ+E 
Sbjct: 241 GSYMPTENAGTKSRSGGMSVSLAGPDGRVVGGGLAGLLIAAGPVQVVVGSFLPG-HQQEQ 300

[Close]

BLAST of Carg20835 vs. TrEMBL
Match: tr|A0A2P5D9Q2|A0A2P5D9Q2_PARAD (PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_084780 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 168/384 (43.75%), Postives = 201/384 (52.34%), Query Frame = 0


Query: 20  MEEKEGVDFGFAVEVSQAPESLGMMDSRPENTXXXXXXXXXXXXXXXXSVPTVAATDG-- 79
           MEEKE    G AV   + P+S   +  R EN+                S PT+AA     
Sbjct: 1   MEEKESSASGVAVSSEEGPDSY-RVAPRNENS------------SGQFSGPTMAAPASTA 60

Query: 80  -----------------KKKRGRPRKYGPNGTVAPTLSPMPISSSIPLSGEFPVWKRGRG 139
                            KKKRGRPRKYGP+GTVA  +SPMPISSSIPL+GEF  WKRGRG
Sbjct: 61  SPXXXXXXXXXXXXXVTKKKRGRPRKYGPDGTVALAISPMPISSSIPLTGEFSAWKRGRG 120

Query: 140 RSVESIKKPRRGYE-FEIP-------------------------GNKVAFIAGADFTPH- 199
           + V+ IKK +  YE +E P                         G K+A+  GA+FTPH 
Sbjct: 121 KPVDPIKKSQNKYEAYEPPDESDIFGVKVESGSAKWGDTDWDYYGEKIAYSVGANFTPHV 180

Query: 200 ----------------------------------------STSSGGTLTYEGRFEILSLS 259
                                                    TSSGGTLTYEGRFEILSLS
Sbjct: 181 LTVNAGEDVTMKVMSFSQQGARAICILSANGTISNVTLRQPTSSGGTLTYEGRFEILSLS 240

Query: 260 GSYMPSESSGTKSRSRGVSVSLAGSDGRVMGGELAGMLIAAGPVQVVVGSFLPPVHQKEH 317
           GSYMP+E++GTKSRS G+SVSLAG DGRV+GG LAG+LIAAGPVQVVVGSFLP  HQ+E 
Sbjct: 241 GSYMPTENAGTKSRSGGMSVSLAGPDGRVVGGGLAGLLIAAGPVQVVVGSFLPG-HQQEQ 300

The following BLAST results are available for this feature:

BLAST of Carg20835 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022928888.1	2.3e-145	87.28	AT-hook motif nuclear-localized protein 3-like [Cucurbita moschata]	[more]
XP_023550576.1	4.8e-143	81.95	AT-hook motif nuclear-localized protein 3-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969936.1	1.2e-141	84.55	AT-hook motif nuclear-localized protein 3-like [Cucurbita maxima]	[more]
XP_008467286.1	6.1e-114	69.03	PREDICTED: AT-hook motif nuclear-localized protein 3-like [Cucumis melo]	[more]
XP_004143720.1	2.2e-111	68.44	PREDICTED: AT-hook motif nuclear-localized protein 3 [Cucumis sativus] >KGN50374...	[more]

BLAST of Carg20835 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G25320.1	3.5e-39	45.29	AT hook motif DNA-binding family protein	[more]
AT5G62260.1	4.4e-34	44.29	AT hook motif DNA-binding family protein	[more]
AT4G22770.1	1.7e-33	42.21	AT hook motif DNA-binding family protein	[more]
AT4G12080.1	5.4e-32	37.55	AT-hook motif nuclear-localized protein 1	[more]
AT5G51590.1	1.2e-31	41.26	AT hook motif DNA-binding family protein	[more]

BLAST of Carg20835 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SB31\|AHL3_ARATH	6.3e-38	45.29	AT-hook motif nuclear-localized protein 3 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9LVB0\|AHL6_ARATH	8.0e-33	44.29	AT-hook motif nuclear-localized protein 6 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|O49658\|AHL2_ARATH	3.0e-32	42.21	AT-hook motif nuclear-localized protein 2 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q8VYJ2\|AHL1_ARATH	9.7e-31	37.55	AT-hook motif nuclear-localized protein 1 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]
sp\|Q9FHM5\|AHL4_ARATH	2.2e-30	41.26	AT-hook motif nuclear-localized protein 4 OS=Arabidopsis thaliana OX=3702 GN=AHL...	[more]

BLAST of Carg20835 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CTE0\|A0A1S3CTE0_CUCME	4.0e-114	69.03	AT-hook motif nuclear-localized protein 3-like OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0KN92\|A0A0A0KN92_CUCSA	1.4e-111	68.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G169100 PE=4 SV=1	[more]
tr\|A0A2N9GG64\|A0A2N9GG64_FAGSY	6.5e-64	45.98	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS29409 PE=4 SV=1	[more]
tr\|A0A2P5CG23\|A0A2P5CG23_9ROSA	7.9e-62	44.53	PPC domain containing protein OS=Trema orientalis OX=63057 GN=TorRG33x02_286150 ...	[more]
tr\|A0A2P5D9Q2\|A0A2P5D9Q2_PARAD	2.6e-60	43.75	PPC domain containing protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_084...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR005175	PPC_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20835-RA	Carg20835-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005175	PPC domain	PFAM	PF03479	DUF296	coord: 161..224 e-value: 1.4E-14 score: 54.3
IPR005175	PPC domain	PROSITE	PS51742	PPC	coord: 105..245 score: 18.943
IPR005175	PPC domain	CDD	cd11378	DUF296	coord: 152..224 e-value: 4.08882E-16 score: 71.4626
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 275..316
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 277..297
None	No IPR available	PANTHER	PTHR31500:SF18	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 6	coord: 20..154
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 20..154
None	No IPR available	PANTHER	PTHR31500:SF18	AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 6	coord: 154..303
None	No IPR available	PANTHER	PTHR31500	FAMILY NOT NAMED	coord: 154..303
None	No IPR available	SUPERFAMILY	SSF117856	AF0104/ALDC/Ptd012-like	coord: 155..238

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20835	Cla003576	Watermelon (97103) v1	carwmB1036
Carg20835	Csa5G169100	Cucumber (Chinese Long) v2	carcuB1049
Carg20835	MELO3C005419	Melon (DHL92) v3.5.1	carmeB1002
Carg20835	ClCG01G005100	Watermelon (Charleston Gray)	carwcgB1008
Carg20835	CSPI05G07950	Wild cucumber (PI 183967)	carcpiB1071
Carg20835	Cucsa.128840	Cucumber (Gy14) v1	carcgyB1150
Carg20835	CmaCh02G010070	Cucurbita maxima (Rimu)	carcmaB1434
Carg20835	CmaCh15G013810	Cucurbita maxima (Rimu)	carcmaB1432
Carg20835	CmoCh02G010220	Cucurbita moschata (Rifu)	carcmoB1389
Carg20835	CmoCh15G014440	Cucurbita moschata (Rifu)	carcmoB1387
Carg20835	Lsi09G005390	Bottle gourd (USVL1VR-Ls)	carlsiB943
Carg20835	Cp4.1LG13g00830	Cucurbita pepo (Zucchini)	carcpeB1438
Carg20835	Cp4.1LG05g07180	Cucurbita pepo (Zucchini)	carcpeB1440
Carg20835	CsGy5G005350	Cucumber (Gy14) v2	carcgybB1018
Carg20835	MELO3C005419.2	Melon (DHL92) v3.6.1	carmedB1014
Carg20835	CsaV3_5G005390	Cucumber (Chinese Long) v3	carcucB1081
Carg20835	Cla97C01G005330	Watermelon (97103) v2	carwmbB1093
Carg20835	Bhi12G000507	Wax gourd	carwgoB1210

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20835	Carg08470	Silver-seed gourd	carcarB586

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20835	Watermelon (97103) v2	carwmbB1095
Carg20835	Wax gourd	carwgoB1214