Carg20817 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20817
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Blue copper protein
Location	Cucurbita_argyrosperma_scaffold_153 : 152033 .. 153082 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTATGGCTATGGCAAAGAACATTCGGGTCTATGTGTTGATGATCATTGGAGGGCTTGCATTGAGCTGCAATGCCGCGACATACATTGTCGGAGACACTTCTGGTTGGGATATCAGCACCGATCTCGACTCTTGGTCTCAGGGCAAGAGGTTCTATGTGGGAGATGTTCTTGGTACGTGTTCATTTACCTTCGTTTTATGCACGGTTGAGTTTACTGTACTTTCTCTATGTAATTTTTGTTGGAGGATGAAAGTCCCACGTCAACTAATTTAGAAAATGATCATGAGTTTATAATCAAAGAATACTCTCTCCATTGACATGAGGTATTTTGGGGAGTCCAAATCAAAGTTAGGAGAGCTTATGCTTAAAGTGGACAATATCATACTATTGTGGAGAGTCGTGTTCGTCAAACATGGTATCAGAGTCATGCCAATAAAATCGTCAAATGTCGAACAAAGGACTCCAAAAGAAAAAGGAGTCGAGCCTCTTCGAAGGGGAGGCGTACTTTGTTCGAGGGGAGGTGTTGGATGATGAAAATCCACATCGGCTAATTCATGGAAAACCATGAGAGTTTATGCTCAAAGTGGACAATACCATACCATACAATTGTGAGAGTCATGTTCGTCCAACCATATTCTAATTCTCTCTCTCTCTCTCTATACAGTGTTCCAATACTCGTCGTCGCAGAGCTTAAACGAAGTGACGAGAGAGAATTACAATACCTGCAACACCACCAACGTTCTAAAAGCCTACACAAACGGAAACACTACCGTCACGCTGTCACAGCCCGGCCAAAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGAATGAAGATGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCGGCCGCTGCTCCTCAGCCACCGCCGCAATCTAACAGCCTCCCTCGGCCCTCTTCCAAAACCGACAACGATGGCGTTCCGAGCGGCTCGACTCGGCTTGTGATCGGTGGAAAAGAGGCACTTGGGATTGTCTTTGCGTGCTATGTCATCTCCTTGGCCTTTATATAA

mRNA sequence

ATGGCTATGGCTATGGCAAAGAACATTCGGGTCTATGTGTTGATGATCATTGGAGGGCTTGCATTGAGCTGCAATGCCGCGACATACATTGTCGGAGACACTTCTGGTTGGGATATCAGCACCGATCTCGACTCTTGGTCTCAGGGCAAGAGGTTCTATAATTACAATACCTGCAACACCACCAACGTTCTAAAAGCCTACACAAACGGAAACACTACCGTCACGCTGTCACAGCCCGGCCAAAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGAATGAAGATGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCGGCCGCTGCTCCTCAGCCACCGCCGCAATCTAACAGCCTCCCTCGGCCCTCTTCCAAAACCGACAACGATGGCGTTCCGAGCGGCTCGACTCGGCTTGTGATCGGTGGAAAAGAGGCACTTGGGATTGTCTTTGCGTGCTATGTCATCTCCTTGGCCTTTATATAA

Coding sequence (CDS)

ATGGCTATGGCTATGGCAAAGAACATTCGGGTCTATGTGTTGATGATCATTGGAGGGCTTGCATTGAGCTGCAATGCCGCGACATACATTGTCGGAGACACTTCTGGTTGGGATATCAGCACCGATCTCGACTCTTGGTCTCAGGGCAAGAGGTTCTATAATTACAATACCTGCAACACCACCAACGTTCTAAAAGCCTACACAAACGGAAACACTACCGTCACGCTGTCACAGCCCGGCCAAAGATTCTTCGTTTCCGGCAACAGGTTGCTCTGTCTCGGCGGAATGAAGATGCAAGTCAACGTCGAGAACAACCAATCATTCTCCCCGGCCGCTGCTCCTCAGCCACCGCCGCAATCTAACAGCCTCCCTCGGCCCTCTTCCAAAACCGACAACGATGGCGTTCCGAGCGGCTCGACTCGGCTTGTGATCGGTGGAAAAGAGGCACTTGGGATTGTCTTTGCGTGCTATGTCATCTCCTTGGCCTTTATATAA

Protein sequence

MAMAMAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYNYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVENNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISLAFI

Homology

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BLAST of Carg20817 vs. NCBI nr
Match: XP_022929168.1 (stellacyanin [Cucurbita moschata])

HSP 1 Score: 301.2 bits (770), Expect = 2.1e-78
Identity = 159/183 (86.89%), Postives = 160/183 (87.43%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY--------- 62
           MAMAKNIRVY LMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY         
Sbjct: 1   MAMAKNIRVYALMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFYVGDVLVFQY 60

Query: 63  ------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 122
                       NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN
Sbjct: 61  SSSQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 120

Query: 123 VENNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISL 165
           VENNQSFSPAAAPQPPPQS+ LPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISL
Sbjct: 121 VENNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISL 180

[Close]

BLAST of Carg20817 vs. NCBI nr
Match: XP_023549499.1 (stellacyanin-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 300.4 bits (768), Expect = 3.6e-78
Identity = 159/185 (85.95%), Postives = 161/185 (87.03%), Query Frame = 0


Query: 1   MAMAMAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY------- 60
           MAMAMAKNI VYVL+IIGGLALSCNA TYIVGDTSGWDISTDLD+WSQGKRFY       
Sbjct: 1   MAMAMAKNIWVYVLVIIGGLALSCNATTYIVGDTSGWDISTDLDAWSQGKRFYVGDVLVF 60

Query: 61  --------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQ 120
                         NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQ
Sbjct: 61  QYSSSQSLNEVTRENYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQ 120

Query: 121 VNVENNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVI 165
           VNVENNQSFSPAAAPQPPPQSN LPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVI
Sbjct: 121 VNVENNQSFSPAAAPQPPPQSNGLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVI 180

[Close]

BLAST of Carg20817 vs. NCBI nr
Match: XP_022969745.1 (stellacyanin [Cucurbita maxima])

HSP 1 Score: 287.3 bits (734), Expect = 3.2e-74
Identity = 152/183 (83.06%), Postives = 156/183 (85.25%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY--------- 62
           MAMA NI VYVL+IIGGLALSCNAATYIVGDTSGWDISTDLD+WSQGKRFY         
Sbjct: 1   MAMANNIWVYVLVIIGGLALSCNAATYIVGDTSGWDISTDLDTWSQGKRFYVGDVLVFQY 60

Query: 63  ------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 122
                       NYNTCNTT VLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN
Sbjct: 61  SSSQSLNEVTRENYNTCNTTKVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 120

Query: 123 VENNQSFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVISL 165
           VENNQSFSPAAAPQPPPQS+ LPRPSSKTDNDG+PSGSTR VIGGKEALGIV ACYVISL
Sbjct: 121 VENNQSFSPAAAPQPPPQSDGLPRPSSKTDNDGIPSGSTRHVIGGKEALGIVLACYVISL 180

[Close]

BLAST of Carg20817 vs. NCBI nr
Match: XP_011654854.1 (PREDICTED: stellacyanin [Cucumis sativus] >KGN50322.1 hypothetical protein Csa_5G167140 [Cucumis sativus])

HSP 1 Score: 220.7 bits (561), Expect = 3.7e-54
Identity = 122/186 (65.59%), Postives = 141/186 (75.81%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMIIGGLA-LSCNAATYIVGDTSGWDISTDLDSWSQGKRFY-------- 62
           M    NI V VL++I G A + CNA TYIVGDTSGWDISTDLD+WSQGKRF+        
Sbjct: 2   MGNNNNIWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQ 61

Query: 63  -------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQV 122
                        N+N+CNTTNVLKAY++GNTTVTLS+PG RFFVSGNRLLCLGGMK+QV
Sbjct: 62  YSSLASLNEVTRENFNSCNTTNVLKAYSSGNTTVTLSEPGHRFFVSGNRLLCLGGMKLQV 121

Query: 123 NVENNQSFSPAAAPQPP-PQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVI 165
           NVENNQSFSPAAAPQPP  QS++LPRPSSKTDN+ VPS +  +VIGG + L  +F CYVI
Sbjct: 122 NVENNQSFSPAAAPQPPSSQSDALPRPSSKTDNNSVPSAAAGVVIGGNQGLAFLFVCYVI 181

[Close]

BLAST of Carg20817 vs. NCBI nr
Match: XP_008436972.1 (PREDICTED: stellacyanin [Cucumis melo])

HSP 1 Score: 216.9 bits (551), Expect = 5.3e-53
Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 8   NIRVYVLMIIGGLA-LSCNAATYIVGDTSGWDISTDLDSWSQGKRFY------------- 67
           N  V VL++I G A + CNA TYIVGDTSGWDISTDLD+WSQGKRF+             
Sbjct: 8   NTWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA 67

Query: 68  --------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVENN 127
                   N+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVENN
Sbjct: 68  SLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENN 127

Query: 128 QSFSPAAAPQPPPQSNS--LPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVIS 161
           QSFSPAAAPQPPP S+S  LPRPSSKTDN+ VP+ +   V+ GK+A  I+F C VIS
Sbjct: 128 QSFSPAAAPQPPPSSHSDDLPRPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVIS 184

[Close]

BLAST of Carg20817 vs. TAIR10
Match: AT5G07475.1 (Cupredoxin superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.5e-28
Identity = 80/183 (43.72%), Postives = 105/183 (57.38%), Query Frame = 0


Query: 11  VYVLMIIGGLAL--SCNAATYIVGDTSGWDISTDLDSWSQGKRFY--------------- 70
           ++ L II G+ +   CNA TY VGD+SGWDIS+DL+SW+ GKRF                
Sbjct: 10  LFNLCIIFGVVVIRRCNATTYFVGDSSGWDISSDLESWTSGKRFSPGDVLMFQYSSTHSV 69

Query: 71  ------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVENNQS 130
                 NY  CNTT+ ++ +TNGNTTV LS+PG RFFV GNRL C  GM++ VNVE N  
Sbjct: 70  YEVAKDNYQNCNTTDAIRTFTNGNTTVALSKPGNRFFVCGNRLHCFAGMRLLVNVEGN-- 129

Query: 131 FSPAAAPQPPPQ--SNSLPRPSSKTDN--DGVPSGSTRLV--IGGKEALGIVFACYVISL 165
             P+ AP   PQ  ++ + +PSSK +N   GV S + R V   G +  +GI     V + 
Sbjct: 130 -GPSQAPVGSPQAATSGILQPSSKKNNPATGVASSAARFVGDSGWRGTMGIFVYFMVFAF 189

[Close]

BLAST of Carg20817 vs. TAIR10
Match: AT3G17675.1 (Cupredoxin superfamily protein)

HSP 1 Score: 55.1 bits (131), Expect = 4.8e-08
Identity = 28/103 (27.18%), Postives = 48/103 (46.60%), Query Frame = 0


Query: 22  LSCNAATYIVGDTSGWDISTDLDSWSQGKRFY----------------------NYNTCN 81
           L      +IVGD++GW++ T+  +W+QG+ F+                       Y  C 
Sbjct: 2   LKSEGTEHIVGDSNGWELFTNYTNWTQGREFHVGDVLVFNYKSDQHNVMQVNSTAYTDCG 61

Query: 82  TTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNV 103
             N    +T GN ++ LS+ G+ +F+ G    C+ G K+ +NV
Sbjct: 62  LDNYTTLFTKGNDSIILSEVGKLWFICGVDDHCVNGQKLSINV 104

[Close]

BLAST of Carg20817 vs. TAIR10
Match: AT2G32300.1 (uclacyanin 1)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 39/147 (26.53%), Postives = 65/147 (44.22%), Query Frame = 0


Query: 5   MAKNIRVYVLMIIGGLALSCNAAT-YIVGDTSGWDISTDLDSWSQGKRFY---------- 64
           MA    + ++ ++    +    AT + +G  SGW +   L +W+ G+ F           
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYP 60

Query: 65  ------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 124
                        +++C     L  + NGN+ V L+ PG+R+F+ G    C  GMK++VN
Sbjct: 61  AAFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVN 120

Query: 125 VENNQSFSPAA-APQPPPQSNSLPRPS 128
           V    + +P A  P   P  N+ P PS
Sbjct: 121 VVPTATVAPTAPLPNTVPSLNA-PSPS 146

[Close]

BLAST of Carg20817 vs. TAIR10
Match: AT4G28365.1 (early nodulin-like protein 3)

HSP 1 Score: 53.1 bits (126), Expect = 1.8e-07
Identity = 40/127 (31.50%), Postives = 57/127 (44.88%), Query Frame = 0


Query: 1   MAMAMAKNIRVYVLMIIG-GLALSCNAATYIVGDTSGW--DISTDLDSWSQGKRF----- 60
           M + M  ++ +  +M++G G  +S N   + VG   GW    S D   WS   RF     
Sbjct: 1   MGLVMRFDLYLMFVMLMGLGFTIS-NGYKFYVGGKDGWVPTPSEDYSHWSHRNRFQVNDT 60

Query: 61  -----------------YNYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGG 103
                              YNTCNTT+ L + ++G++   LS  G  FF+SGN   CL G
Sbjct: 61  LHFKYAKGKDSVLEVTEQEYNTCNTTHPLTSLSDGDSLFLLSHSGSYFFISGNSQNCLKG 120

[Close]

BLAST of Carg20817 vs. TAIR10
Match: AT4G32490.1 (early nodulin-like protein 4)

HSP 1 Score: 50.8 bits (120), Expect = 9.1e-07
Identity = 41/128 (32.03%), Postives = 56/128 (43.75%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMI-IGGLALS---CNAATYIVGDTSGWDI--STDLDSWSQGKRFY--- 62
           M   K   VY++++ + GL  S    N   + VG   GW +  S D   WS   RF    
Sbjct: 1   MVFVKMTDVYLMIVMLMGLGFSIELSNGHKFYVGGRDGWVLTPSEDYSHWSHRNRFQVND 60

Query: 63  -------------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLG 103
                               YNTCNTT+ L + ++G++   LS+    FFVSGN   CL 
Sbjct: 61  TLYFKYVKGKDSVLEVSEKEYNTCNTTHPLTSLSDGDSLFLLSRSDPFFFVSGNSGSCLK 120

[Close]

BLAST of Carg20817 vs. Swiss-Prot
Match: sp|O82081|UCC1_ARATH (Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.3e-06
Identity = 39/147 (26.53%), Postives = 65/147 (44.22%), Query Frame = 0


Query: 5   MAKNIRVYVLMIIGGLALSCNAAT-YIVGDTSGWDISTDLDSWSQGKRFY---------- 64
           MA    + ++ ++    +    AT + +G  SGW +   L +W+ G+ F           
Sbjct: 1   MASREMLIIISVLATTLIGLTVATDHTIGGPSGWTVGASLRTWAAGQTFAVGDNLVFSYP 60

Query: 65  ------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVN 124
                        +++C     L  + NGN+ V L+ PG+R+F+ G    C  GMK++VN
Sbjct: 61  AAFHDVVEVTKPEFDSCQAVKPLITFANGNSLVPLTTPGKRYFICGMPGHCSQGMKLEVN 120

Query: 125 VENNQSFSPAA-APQPPPQSNSLPRPS 128
           V    + +P A  P   P  N+ P PS
Sbjct: 121 VVPTATVAPTAPLPNTVPSLNA-PSPS 146

[Close]

BLAST of Carg20817 vs. Swiss-Prot
Match: sp|Q8LC95|ENL3_ARATH (Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 SV=2)

HSP 1 Score: 46.6 bits (109), Expect = 3.1e-04
Identity = 46/172 (26.74%), Postives = 71/172 (41.28%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDI----STDLDSWSQGKRF------ 62
           MA    +  + L+      L C+    + G TS W I    S  L+ W++  RF      
Sbjct: 1   MAQRTLVATFFLIFFLLTNLVCSKEIIVGGKTSSWKIPSSPSESLNKWAESLRFRVGDTL 60

Query: 63  ---YN-------------YNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGM 122
              Y+             Y  CNTTN    Y+NG+T V L + G  FF+SG++  C+ G 
Sbjct: 61  VWKYDEEKDSVLQVTKDAYINCNTTNPAANYSNGDTKVKLERSGPYFFISGSKSNCVEGE 120

Query: 123 KMQVNVENNQ-----SFSPAAAPQPPPQSNSLPRPSSKTDNDGVPSGSTRLV 144
           K+ + V +++      F   ++P        L  P+    + G  S  TR V
Sbjct: 121 KLHIVVMSSRGGHTGGFFTGSSPXXXXXXXLLGAPTVAPASGGSASSLTRQV 172

[Close]

BLAST of Carg20817 vs. Swiss-Prot
Match: sp|Q9SK27|ENL1_ARATH (Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 SV=2)

HSP 1 Score: 46.2 bits (108), Expect = 4.0e-04
Identity = 26/62 (41.94%), Postives = 35/62 (56.45%), Query Frame = 0


Query: 55  YNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNV--ENNQSFSPAA 114
           YN+CNTTN L  YT+G T V L + G  +F+SG    C  G K+ + V    +   SPA 
Sbjct: 84  YNSCNTTNPLANYTDGETKVKLDRSGPFYFISGANGHCEKGQKLSLVVISPRHSVISPAP 143

[Close]

BLAST of Carg20817 vs. TrEMBL
Match: tr|A0A0A0KPG5|A0A0A0KPG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140 PE=4 SV=1)

HSP 1 Score: 220.7 bits (561), Expect = 2.4e-54
Identity = 122/186 (65.59%), Postives = 141/186 (75.81%), Query Frame = 0


Query: 3   MAMAKNIRVYVLMIIGGLA-LSCNAATYIVGDTSGWDISTDLDSWSQGKRFY-------- 62
           M    NI V VL++I G A + CNA TYIVGDTSGWDISTDLD+WSQGKRF+        
Sbjct: 2   MGNNNNIWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQ 61

Query: 63  -------------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQV 122
                        N+N+CNTTNVLKAY++GNTTVTLS+PG RFFVSGNRLLCLGGMK+QV
Sbjct: 62  YSSLASLNEVTRENFNSCNTTNVLKAYSSGNTTVTLSEPGHRFFVSGNRLLCLGGMKLQV 121

Query: 123 NVENNQSFSPAAAPQPP-PQSNSLPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVI 165
           NVENNQSFSPAAAPQPP  QS++LPRPSSKTDN+ VPS +  +VIGG + L  +F CYVI
Sbjct: 122 NVENNQSFSPAAAPQPPSSQSDALPRPSSKTDNNSVPSAAAGVVIGGNQGLAFLFVCYVI 181

[Close]

BLAST of Carg20817 vs. TrEMBL
Match: tr|A0A1S3AT20|A0A1S3AT20_CUCME (stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1)

HSP 1 Score: 216.9 bits (551), Expect = 3.5e-53
Identity = 118/177 (66.67%), Postives = 135/177 (76.27%), Query Frame = 0


Query: 8   NIRVYVLMIIGGLA-LSCNAATYIVGDTSGWDISTDLDSWSQGKRFY------------- 67
           N  V VL++I G A + CNA TYIVGDTSGWDISTDLD+WSQGKRF+             
Sbjct: 8   NTWVCVLVVIFGFAFIRCNATTYIVGDTSGWDISTDLDTWSQGKRFFVGDVLVFQYSSSA 67

Query: 68  --------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVENN 127
                   N+NTCNTTNVLKAY++GNTTVTLS+PGQRFFVSGNRLLCLGGMK+QVNVENN
Sbjct: 68  SLNEVTRENFNTCNTTNVLKAYSSGNTTVTLSKPGQRFFVSGNRLLCLGGMKLQVNVENN 127

Query: 128 QSFSPAAAPQPPPQSNS--LPRPSSKTDNDGVPSGSTRLVIGGKEALGIVFACYVIS 161
           QSFSPAAAPQPPP S+S  LPRPSSKTDN+ VP+ +   V+ GK+A  I+F C VIS
Sbjct: 128 QSFSPAAAPQPPPSSHSDDLPRPSSKTDNNSVPNTAAGFVMEGKQARAILFVCCVIS 184

[Close]

BLAST of Carg20817 vs. TrEMBL
Match: tr|A0A2N9E7B8|A0A2N9E7B8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10413 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 4.6e-37
Identity = 88/166 (53.01%), Postives = 121/166 (72.89%), Query Frame = 0


Query: 7   KNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY------------- 66
           K ++VYVL+I+  LAL+C A TY+VGD+SGWDISTDL++W + K FY             
Sbjct: 4   KQLQVYVLVIL-SLALTCTATTYVVGDSSGWDISTDLETWEKNKTFYVGDALQFQFSSSN 63

Query: 67  --------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVENN 126
                   N+NTC+TTNVLK+YTNGNTT++LS+PG R+F+SGN+L CLGGMK+QVNVENN
Sbjct: 64  SLDEVTQQNFNTCSTTNVLKSYTNGNTTISLSKPGPRYFISGNKLYCLGGMKLQVNVENN 123

Query: 127 QSFSPAAAPQPPPQSNSL-PRPSSKTDNDGVPSGSTRLVIGGKEAL 151
           Q++SPA+APQP   S +  P+PSSK++   +P+ S+ ++ GG + L
Sbjct: 124 QAYSPASAPQPATGSGATHPQPSSKSN---IPT-SSGVMHGGWDTL 164

[Close]

BLAST of Carg20817 vs. TrEMBL
Match: tr|A0A2I4FHL8|A0A2I4FHL8_9ROSI (stellacyanin OS=Juglans regia OX=51240 GN=LOC108998870 PE=4 SV=1)

HSP 1 Score: 159.1 bits (401), Expect = 8.6e-36
Identity = 90/169 (53.25%), Postives = 116/169 (68.64%), Query Frame = 0


Query: 5   MAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY----------- 64
           MAK ++V+VL+ +  LAL+C A TY+VGD SGWDISTDLDSW++GKRF            
Sbjct: 1   MAKQLQVFVLVAL-SLALTCTATTYVVGDNSGWDISTDLDSWTKGKRFVVGDVLLFQFSS 60

Query: 65  ----------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124
                     N+N CNTTNVLK+YTNGNTTVTLS+PG R+F+SGN+L CLGGMK+QVNVE
Sbjct: 61  SNSLEEVTKENFNNCNTTNVLKSYTNGNTTVTLSKPGPRYFISGNKLYCLGGMKLQVNVE 120

Query: 125 -NNQSFSPAAAPQPPPQS----NSLPRPSSKTD---NDGVPSGSTRLVI 145
            NNQ +SPA AP P   S    ++LPR S+K++   ++GV  G    ++
Sbjct: 121 DNNQEYSPAGAPLPADASDQGGDALPRSSTKSNVPISNGVVHGGWHTLV 168

[Close]

BLAST of Carg20817 vs. TrEMBL
Match: tr|B9GK42|B9GK42_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G080700v3 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 2.8e-34
Identity = 86/182 (47.25%), Postives = 120/182 (65.93%), Query Frame = 0


Query: 5   MAKNIRVYVLMIIGGLALSCNAATYIVGDTSGWDISTDLDSWSQGKRFY----------- 64
           MAK + VY L+++ GLAL+CNAATY+VGD SGWDISTDLD+W+Q K F            
Sbjct: 1   MAKLVLVYSLVVL-GLALTCNAATYMVGDNSGWDISTDLDTWAQSKTFVVGDLLSFQYSS 60

Query: 65  ----------NYNTCNTTNVLKAYTNGNTTVTLSQPGQRFFVSGNRLLCLGGMKMQVNVE 124
                     ++++CNTTNV + +TNGNTTV L++PG R+FV GN+L CLGGMK+QVNVE
Sbjct: 61  SHSLEEVKKEDFDSCNTTNVARTFTNGNTTVPLTEPGTRYFVCGNQLHCLGGMKLQVNVE 120

Query: 125 NNQSFSPAAAPQPPPQSNSLPRPSSKTDND-GVPSGSTRLVIGGKEALGIVFACYVISLA 165
           +NQ+  P  APQ  P   +L +PSSK++N   V   S   V GG++ + + F  +V ++ 
Sbjct: 121 DNQANPPIGAPQAQPAGGTLTQPSSKSNNPASVIPTSAGSVYGGRDCIVMAFLGFVATMF 180

The following BLAST results are available for this feature:

BLAST of Carg20817 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022929168.1	2.1e-78	86.89	stellacyanin [Cucurbita moschata]	[more]
XP_023549499.1	3.6e-78	85.95	stellacyanin-like [Cucurbita pepo subsp. pepo]	[more]
XP_022969745.1	3.2e-74	83.06	stellacyanin [Cucurbita maxima]	[more]
XP_011654854.1	3.7e-54	65.59	PREDICTED: stellacyanin [Cucumis sativus] >KGN50322.1 hypothetical protein Csa_5...	[more]
XP_008436972.1	5.3e-53	66.67	PREDICTED: stellacyanin [Cucumis melo]	[more]

BLAST of Carg20817 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G07475.1	2.5e-28	43.72	Cupredoxin superfamily protein	[more]
AT3G17675.1	4.8e-08	27.18	Cupredoxin superfamily protein	[more]
AT2G32300.1	1.8e-07	26.53	uclacyanin 1	[more]
AT4G28365.1	1.8e-07	31.50	early nodulin-like protein 3	[more]
AT4G32490.1	9.1e-07	32.03	early nodulin-like protein 4	[more]

BLAST of Carg20817 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O82081\|UCC1_ARATH	3.3e-06	26.53	Uclacyanin 1 OS=Arabidopsis thaliana OX=3702 GN=UCC1 PE=1 SV=1	[more]
sp\|Q8LC95\|ENL3_ARATH	3.1e-04	26.74	Early nodulin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=At5g25090 PE=2 S...	[more]
sp\|Q9SK27\|ENL1_ARATH	4.0e-04	41.94	Early nodulin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=At2g25060 PE=2 S...	[more]

BLAST of Carg20817 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KPG5\|A0A0A0KPG5_CUCSA	2.4e-54	65.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G167140 PE=4 SV=1	[more]
tr\|A0A1S3AT20\|A0A1S3AT20_CUCME	3.5e-53	66.67	stellacyanin OS=Cucumis melo OX=3656 GN=LOC103482542 PE=4 SV=1	[more]
tr\|A0A2N9E7B8\|A0A2N9E7B8_FAGSY	4.6e-37	53.01	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS10413 PE=4 SV=1	[more]
tr\|A0A2I4FHL8\|A0A2I4FHL8_9ROSI	8.6e-36	53.25	stellacyanin OS=Juglans regia OX=51240 GN=LOC108998870 PE=4 SV=1	[more]
tr\|B9GK42\|B9GK42_POPTR	2.8e-34	47.25	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_001G080700v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0009055	electron carrier activity

Vocabulary: **INTERPRO**
Term	Definition
IPR039391	Phytocyanin
IPR003245	Phytocyanin_dom
IPR008972	Cupredoxin

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0009055	electron carrier activity

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20817-RA	Carg20817-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	G3DSA:2.60.40.420		coord: 53..115 e-value: 3.2E-13 score: 51.2
IPR008972	Cupredoxin	SUPERFAMILY	SSF49503	Cupredoxins	coord: 26..102
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 26..96 e-value: 6.2E-10 score: 38.9
IPR003245	Phytocyanin domain	PRODOM	PD003122		coord: 54..103 e-value: 2.0E-15 score: 198.0
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 1..104 score: 14.63
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 107..139
None	No IPR available	PANTHER	PTHR33021:SF70	SUBFAMILY NOT NAMED	coord: 5..52 coord: 54..161
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0
None	No IPR available	CDD	cd04216	Phytocyanin	coord: 27..102 e-value: 1.89216E-26 score: 96.5604
IPR039391	Phytocyanin	PANTHER	PTHR33021	FAMILY NOT NAMED	coord: 5..52 coord: 54..161

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20817	Cla003616	Watermelon (97103) v1	carwmB1036
Carg20817	Csa5G167140	Cucumber (Chinese Long) v2	carcuB1049
Carg20817	MELO3C005463	Melon (DHL92) v3.5.1	carmeB1002
Carg20817	ClCG01G004730	Watermelon (Charleston Gray)	carwcgB1008
Carg20817	CSPI05G07480	Wild cucumber (PI 183967)	carcpiB1071
Carg20817	Cucsa.129300	Cucumber (Gy14) v1	carcgyB1150
Carg20817	CmaCh15G013630	Cucurbita maxima (Rimu)	carcmaB1432
Carg20817	CmoCh15G014240	Cucurbita moschata (Rifu)	carcmoB1387
Carg20817	Lsi09G004920	Bottle gourd (USVL1VR-Ls)	carlsiB943
Carg20817	Cp4.1LG13g00780	Cucurbita pepo (Zucchini)	carcpeB1438
Carg20817	CsGy5G004940	Cucumber (Gy14) v2	carcgybB1018
Carg20817	MELO3C005463.2	Melon (DHL92) v3.6.1	carmedB1014
Carg20817	CsaV3_5G004920	Cucumber (Chinese Long) v3	carcucB1081
Carg20817	Cla97C01G004950	Watermelon (97103) v2	carwmbB1093
Carg20817	Cla97C11G220350	Watermelon (97103) v2	carwmbB1095
Carg20817	BhiUN395G17	Wax gourd	carwgoB1213
Carg20817	Bhi09G002092	Wax gourd	carwgoB1214

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg20817	Silver-seed gourd	carcarB586
Carg20817	Cucurbita maxima (Rimu)	carcmaB1434
Carg20817	Cucurbita moschata (Rifu)	carcmoB1389
Carg20817	Cucurbita pepo (Zucchini)	carcpeB1440
Carg20817	Wax gourd	carwgoB1211