Carg20545 (gene) Silver-seed gourd

Overview
NameCarg20545
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
Descriptionnucleolar GTP-binding protein 2
LocationCucurbita_argyrosperma_scaffold_113 : 189863 .. 191201 (-)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAATCCATGAAATCAAGAACTTCCAAATCCAAACCCACTGCTCCGCCGGCCGACCTTCTCGTCTGCTTTCCGGCACGTTCCCCTCTCACCCTTTTACCAAAGCCCATCTGCAGTCCGGCCAGACCGCCGTCGGAATCCCACCGTCGCCACCAGAAAAGGCCAACGCCGGTTGGAGCCGCCCAAGCTAGCCCTCTGCTCTGGGCCAAGGAGTTGGCGTCGGAGCCGACATCGCCGAAGGTCACATGTGCCGGCAAGATCAAAATCCGACCCGCCACCAAGAATTGGCGATCAGTTATGGAAGAAATCGAGCGAATTCACAAGAAGAAGAAGAAGAAATTACCCAATCAAAATCAAAACCCACTTCGATTCAGAAGAGAAATCGTTAATATTCTGTCGTGTTTTCGCGGCTTCCGCTTCGATTTCCGTTGCTTCAGAGGCTTCCATCAGTCCGTAATCACATCGGAAGAAGAACAAGAAGACGGCGGCGGCGACCGCGACGGCGAGTGCGAATCGGAAGAAGAACCCACCAAAGGTTCGAGAAGAACAATGTTCGCGGAATGGTTCATGATTGTACACGAAAAAGAAGAAACCAAACCCAGAAACAATATCGGTTGCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGTTGCAGATCAGTCGGGTGGATCGAGCGGAAACCAAAAGAAGAACAAGAAGAAAAACAATCCAAAATCAGTCACAATCCATTGCTGAGAACTCGGAGTCGGAGTTAAATCACGACTCTCCACAATGGTATGTCCACTTTGAGCATAAGCTCTCATGTGCACACTATAAGCCTCCCCTGAGGCTTATGGAGCTCTCGAATAGCCTCCCCTTAATTGAGGCTCGACTCCTTTCTCTGGAGCCCTCGAACAAAGTACACCATTTGTTCGACATGTTAGTCACTTTTTGACTACACCTTCGAGGCTCGCCATTCTTTGTTCGCATATTTGAAGGATTCTATTGGCATGGTTAAGTTTAGGGCATGGCTCTAATAGATGTTAGGAATCACGGAAAACAATGATGATTATGAGCATTCTCATGGCCTTTGGGCTTCCCCAAAAGGGCCTCATACCATGGAGATAGTATTCCTCACTTAAACCCATGATCTCCACTAAATTAACTGTGGACATCAATAATCTCAACAAAAGATGTAAAGAGGGAAAAAGAATTATGATTATGCCCACTAATCATGATTATCCCTTTTAATTTGGTTTTAATTTCTGCTCTTAATCACCTCTGTCCTTGATATTTCATTTTTCTATTTCTTCATATATATATATATATATATATGAAAGAAAAAATAATAATTAA

mRNA sequence

ATGAAATCCATGAAATCAAGAACTTCCAAATCCAAACCCACTGCTCCGCCGGCCGACCTTCTCGTCTGCTTTCCGGCACGTTCCCCTCTCACCCTTTTACCAAAGCCCATCTGCAGTCCGGCCAGACCGCCGTCGGAATCCCACCGTCGCCACCAGAAAAGGCCAACGCCGGTTGGAGCCGCCCAAGCTAGCCCTCTGCTCTGGGCCAAGGAGTTGGCGTCGGAGCCGACATCGCCGAAGGTCACATGTGCCGGCAAGATCAAAATCCGACCCGCCACCAAGAATTGGCGATCAGTTATGGAAGAAATCGAGCGAATTCACAAGAAGAAGAAGAAGAAATTACCCAATCAAAATCAAAACCCACTTCGATTCAGAAGAGAAATCGTTAATATTCTGTCGTGTTTTCGCGGCTTCCGCTTCGATTTCCGTTGCTTCAGAGGCTTCCATCAGTCCGTAATCACATCGGAAGAAGAACAAGAAGACGGCGGCGGCGACCGCGACGGCGAGTGCGAATCGGAAGAAGAACCCACCAAAGGTTCGAGAAGAACAATGTTCGCGGAATGGTTCATGATTGTACACGAAAAAGAAGAAACCAAACCCAGAAACAATATCGGTTGCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGTTGCAGATCAGTCGGAAAAAATAATAATTAA

Coding sequence (CDS)

ATGAAATCCATGAAATCAAGAACTTCCAAATCCAAACCCACTGCTCCGCCGGCCGACCTTCTCGTCTGCTTTCCGGCACGTTCCCCTCTCACCCTTTTACCAAAGCCCATCTGCAGTCCGGCCAGACCGCCGTCGGAATCCCACCGTCGCCACCAGAAAAGGCCAACGCCGGTTGGAGCCGCCCAAGCTAGCCCTCTGCTCTGGGCCAAGGAGTTGGCGTCGGAGCCGACATCGCCGAAGGTCACATGTGCCGGCAAGATCAAAATCCGACCCGCCACCAAGAATTGGCGATCAGTTATGGAAGAAATCGAGCGAATTCACAAGAAGAAGAAGAAGAAATTACCCAATCAAAATCAAAACCCACTTCGATTCAGAAGAGAAATCGTTAATATTCTGTCGTGTTTTCGCGGCTTCCGCTTCGATTTCCGTTGCTTCAGAGGCTTCCATCAGTCCGTAATCACATCGGAAGAAGAACAAGAAGACGGCGGCGGCGACCGCGACGGCGAGTGCGAATCGGAAGAAGAACCCACCAAAGGTTCGAGAAGAACAATGTTCGCGGAATGGTTCATGATTGTACACGAAAAAGAAGAAACCAAACCCAGAAACAATATCGGTTGCTCTGTTCCGCCGCCAAATGCTCTGTTACTGATGCGTTGCAGATCAGTCGGAAAAAATAATAATTAA

Protein sequence

MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGAAQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEEQEDGGGDRDGECESEEEPTKGSRRTMFAEWFMIVHEKEETKPRNNIGCSVPPPNALLLMRCRSVGKNNN
Homology
[Close]
BLAST of Carg20545 vs. NCBI nr
Match: XP_022951866.1 (uncharacterized protein LOC111454598 [Cucurbita moschata])

HSP 1 Score: 392.5 bits (1007), Expect = 9.7e-106
Identity = 206/223 (92.38%), Postives = 207/223 (92.83%), Query Frame = 0 

Query: 1   MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGA 60
           MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARP SESHRRHQKRPTPVGA
Sbjct: 1   MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPSSESHRRHQKRPTPVGA 60

Query: 61  AQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQN 120
           +QASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQN
Sbjct: 61  SQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQN 120

Query: 121 PLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTKGS 180
           PLRFRREIVNILSCFRGFRFDFRCFRGFHQ VITSE  XXXXXX            TKGS
Sbjct: 121 PLRFRREIVNILSCFRGFRFDFRCFRGFHQYVITSE--XXXXXXXXXXXXXXXXXXTKGS 180

Query: 181 RRTMFAEWFMIVHEKEETKPRNNIGCSVPPPNALLLMRCRSVG 224
           RRTMFAEWFMIVHEKEETKPRNNIGCSVPPPNALLLMRCRSVG
Sbjct: 181 RRTMFAEWFMIVHEKEETKPRNNIGCSVPPPNALLLMRCRSVG 221

[Close]
BLAST of Carg20545 vs. NCBI nr
Match: XP_023537819.1 (uncharacterized protein LOC111798734 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 388.7 bits (997), Expect = 1.4e-104
Identity = 204/223 (91.48%), Postives = 205/223 (91.93%), Query Frame = 0 

Query: 1   MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGA 60
           MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGA
Sbjct: 1   MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGA 60

Query: 61  AQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQN 120
           AQASPLLWAKELASEPTSPKVTCAGKIKIRP TKNWRSVMEEIERIHKKKKKKLPNQNQN
Sbjct: 61  AQASPLLWAKELASEPTSPKVTCAGKIKIRPTTKNWRSVMEEIERIHKKKKKKLPNQNQN 120

Query: 121 PLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTKGS 180
           PLRF+REIVNILSCFRGFRFDFRCFRGFHQSVITSE  XXXXXX             KGS
Sbjct: 121 PLRFKREIVNILSCFRGFRFDFRCFRGFHQSVITSE--XXXXXXXXXXXXXXXXXXXKGS 180

Query: 181 RRTMFAEWFMIVHEKEETKPRNNIGCSVPPPNALLLMRCRSVG 224
           RRTMFAEWFMIV EKEETKPRNNI CSVPPPNALLLMRCRSVG
Sbjct: 181 RRTMFAEWFMIVQEKEETKPRNNISCSVPPPNALLLMRCRSVG 221

[Close]
BLAST of Carg20545 vs. NCBI nr
Match: XP_023002876.1 (uncharacterized protein LOC111496612 [Cucurbita maxima])

HSP 1 Score: 376.3 bits (965), Expect = 7.2e-101
Identity = 198/231 (85.71%), Postives = 207/231 (89.61%), Query Frame = 0 

Query: 1   MKSMKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGA 60
           MKSMKSRTSKSKPTAPP+DLLVCFPARSPLTLLPKPICSPA+P SESHRRHQK+PTPVGA
Sbjct: 1   MKSMKSRTSKSKPTAPPSDLLVCFPARSPLTLLPKPICSPAKPASESHRRHQKKPTPVGA 60

Query: 61  AQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQN 120
           AQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIH+KKK+KLPNQNQN
Sbjct: 61  AQASPLLWAKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHQKKKRKLPNQNQN 120

Query: 121 PLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTKGS 180
           PLRF+REIVNILSC RGFRFDFRCFRGFHQSVITSE XXXXXXX            ++GS
Sbjct: 121 PLRFKREIVNILSCLRGFRFDFRCFRGFHQSVITSEXXXXXXXXXXXXXXXXXXXXSRGS 180

Query: 181 RRTMFAEWFMIVHEKEETKPRNNIGCS--------VPPPNALLLMRCRSVG 224
           RRTMF+EWFMIVHEKEETKPRNNI CS        VPPPNALLLMRCRSVG
Sbjct: 181 RRTMFSEWFMIVHEKEETKPRNNIDCSSLDLRRCDVPPPNALLLMRCRSVG 231

[Close]
BLAST of Carg20545 vs. NCBI nr
Match: XP_023546364.1 (uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.3 bits (630), Expect = 5.0e-62
Identity = 152/240 (63.33%), Postives = 171/240 (71.25%), Query Frame = 0 

Query: 4   MKSR-TSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGAAQ 63
           MKSR  +K K  APPADLLVCFPAR+ LTLLPKP CSPAR  +E HRRHQK+  P   +Q
Sbjct: 1   MKSRNNTKPKSIAPPADLLVCFPARARLTLLPKPTCSPARASAEPHRRHQKKAPPPSQSQ 60

Query: 64  ASPLLWAKELASEPTSPKVTCAGKIKIRP----ATKNWRSVMEEIERIHKKKKKKLPN-- 123
           ASPLLWAKE+ASEPTSPKVTCAG+IKI+P    +TKNW+SVMEEIERIH  KKKK+PN  
Sbjct: 61  ASPLLWAKEMASEPTSPKVTCAGQIKIKPHARRSTKNWQSVMEEIERIH--KKKKIPNWG 120

Query: 124 ---QNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQS-VITSEE---XXXXXXXDRDGE 183
              Q+QNP  F+REIVN LSC RGFRFDFRCFRGF +S  IT+EE   XXXXXXX     
Sbjct: 121 NQIQDQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPESDDITTEEXXXXXXXXXXXXXXX 180

Query: 184 CESEEEPTKGSRRTMFAEWFMI----VHEKEETKPRNNIG----CSVPPPNALLLMRCRS 222
                      RRTMF++WFM+            PRN+ G    CSVPPPNALLLMRCRS
Sbjct: 181 XXXXXXXXXXXRRTMFSKWFMVXXXXXXXXXXXXPRNDTGELQPCSVPPPNALLLMRCRS 238

[Close]
BLAST of Carg20545 vs. NCBI nr
Match: XP_008445342.2 (PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo])

HSP 1 Score: 237.7 bits (605), Expect = 4.0e-59
Identity = 150/238 (63.03%), Postives = 167/238 (70.17%), Query Frame = 0 

Query: 4   MKSRT-SKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGAAQ 63
           MK R  SKSKPTAPPADLLVCFPAR+ LTLLP    SPAR P+E HRRH ++      AQ
Sbjct: 1   MKRRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRK------AQ 60

Query: 64  ASPLLWAKELASEPTSPKVTCAGKIKIRP----ATKNWRSVMEEIERIHKKKKKKLPNQN 123
            SPL WAKE++SEPTSPKVTCAG+IKIRP    +TKNW+SVMEEIERIH KKK   P +N
Sbjct: 61  PSPLPWAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKKN--PIRN 120

Query: 124 QNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTK 183
           QNPL F+REIVN LSC RGFRFDFRCFRGF QS IT++ XXXXXXX              
Sbjct: 121 QNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXX 180

Query: 184 GSR----RTMFAEWFMIV-HEKEETKPRNN----------IGCSVPPPNALLLMRCRS 222
                  RTMF+EWFM++  E+EETKP NN             SVPPPNALLLMRCRS
Sbjct: 181 XXXXXRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRS 226

[Close]
BLAST of Carg20545 vs. TAIR10
Match: AT1G78110.1 (unknown protein)

HSP 1 Score: 116.7 bits (291), Expect = 1.9e-26
Identity = 93/246 (37.80%), Postives = 117/246 (47.56%), Query Frame = 0 

Query: 18  ADLLVCFPARSPLTLLPKPICSPARPPS-------ESHRRHQKRPTPVGAAQASPLLWAK 77
           ADLLVCFP+R+ L L PKPICSP+RP                           SP+LWAK
Sbjct: 18  ADLLVCFPSRTHLALTPKPICSPSRPSDXXXXXXXXXXXXXXXXXXXXXXXXXSPVLWAK 77

Query: 78  ELAS---------EPTSPKVTCAGKIKIRPAT-----KNWRSVMEEIERIHKKKKKKLPN 137
           + +S         EPTSPKVTCAG+IK+RP+      KNW+SVMEEIERIH        N
Sbjct: 78  QASSKNMGGDEIAEPTSPKVTCAGQIKVRPSKCGGRGKNWQSVMEEIERIH-------DN 137

Query: 138 QNQNP-LRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEE 197
           ++Q+     +++++  L+C R  +FDFRCF  F  + +T   XXXXXXX           
Sbjct: 138 RSQSKFFGLKKDVMGFLTCLRNIKFDFRCFGDFRHADVTXXXXXXXXXXXXXXXXXXXXX 197

Query: 198 PTKGSRRTMFAEWFMIVH--------------------EKEETKPRNNIGCSVPPPNALL 222
                                                 E  ET+P      +VPPPNALL
Sbjct: 198 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLEDTETEP------AVPPPNALL 250

[Close]
BLAST of Carg20545 vs. TAIR10
Match: AT1G22230.1 (unknown protein)

HSP 1 Score: 89.7 bits (221), Expect = 2.4e-18
Identity = 78/233 (33.48%), Postives = 107/233 (45.92%), Query Frame = 0 

Query: 12  KPTAPPADLLVCFPARSPLTLLPKPICSPA-----RPPSESHRRHQKRPTPVGAAQASPL 71
           K +   ADL+VCFP+R+ L+L  K I SP+                              
Sbjct: 8   KSSGYSADLMVCFPSRAHLSLPSKSISSPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 67

Query: 72  LWAKELASEPTSPKVTCAGKIKIRPAT-----KNWRSVMEEIERIHKKKKKKLPNQNQNP 131
                    PTSPKVTCAG+IK+R +      KNW+S+M EIE+IH+ K +         
Sbjct: 68  XXXXXXXXXPTSPKVTCAGQIKVRSSKRDGGGKNWQSLMAEIEKIHRSKSE------SKF 127

Query: 132 LRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTKGSR 191
              +R+++  L+C R   FDFRCF  F    I     XXXXXX                 
Sbjct: 128 FGIKRDVMGFLTCLRD--FDFRCFGAFPPVDI----IXXXXXXXXXXXXXXXXXXXXXXX 187

Query: 192 RTMFAEWFMIVHEKEETKP--------RNNIGCSVPPPNALLLMRCRSVGKNN 227
              F++W M++HEK+  +          +++  +VPPPNALLLMRCRS    N
Sbjct: 188 XXXFSKWLMVLHEKQNNEECVDGKENVFSDVETAVPPPNALLLMRCRSAPVKN 228

[Close]
BLAST of Carg20545 vs. TAIR10
Match: AT5G03110.1 (FUNCTIONS IN: molecular_function unknown)

HSP 1 Score: 42.4 bits (98), Expect = 4.5e-04
Identity = 42/154 (27.27%), Postives = 63/154 (40.91%), Query Frame = 0 

Query: 69  AKELASEPTSPKVTCAGKIKIRPATKNWRSVMEEIERIHKKKKKKLPNQNQNPLRFRREI 128
           A  +A EP+SPKVTC G++                 R+++ K K  P    NP R R E 
Sbjct: 58  AAAVAQEPSSPKVTCMGQV-----------------RVNRSKPKIKPESRDNPTRRRCEW 117

Query: 129 VNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTKGSRRTMFAEW 188
           +   S +  F    +    + +  + S         ++D      + PT  S R +  E 
Sbjct: 118 LRNASFYNKFAGKIKTMTFWPKWRLCSFSCACRNLKEKDSPRSQLDHPTTESVREIKEE- 177

Query: 189 FMIVHEKEETKPRNNIG-CSVPPPNALLLMRCRS 222
             I  E+    P+  +   + PP NALLL R RS
Sbjct: 178 --IEGEENFEIPKLFVSPATTPPINALLLTRSRS 191

[Close]
BLAST of Carg20545 vs. TrEMBL
Match: tr|A0A1S3BDB9|A0A1S3BDB9_CUCME (uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=4 SV=1)

HSP 1 Score: 237.7 bits (605), Expect = 2.6e-59
Identity = 150/238 (63.03%), Postives = 167/238 (70.17%), Query Frame = 0 

Query: 4   MKSRT-SKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVGAAQ 63
           MK R  SKSKPTAPPADLLVCFPAR+ LTLLP    SPAR P+E HRRH ++      AQ
Sbjct: 1   MKRRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARAPAEPHRRHYRK------AQ 60

Query: 64  ASPLLWAKELASEPTSPKVTCAGKIKIRP----ATKNWRSVMEEIERIHKKKKKKLPNQN 123
            SPL WAKE++SEPTSPKVTCAG+IKIRP    +TKNW+SVMEEIERIH KKK   P +N
Sbjct: 61  PSPLPWAKEMSSEPTSPKVTCAGQIKIRPHAHRSTKNWQSVMEEIERIHNKKKN--PIRN 120

Query: 124 QNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECESEEEPTK 183
           QNPL F+REIVN LSC RGFRFDFRCFRGF QS IT++ XXXXXXX              
Sbjct: 121 QNPLGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXXXXX 180

Query: 184 GSR----RTMFAEWFMIV-HEKEETKPRNN----------IGCSVPPPNALLLMRCRS 222
                  RTMF+EWFM++  E+EETKP NN             SVPPPNALLLMRCRS
Sbjct: 181 XXXXXRGRTMFSEWFMVLQEEEEETKPINNDAVSSLEFQPSSVSVPPPNALLLMRCRS 226

[Close]
BLAST of Carg20545 vs. TrEMBL
Match: tr|A0A0A0LMI6|A0A0A0LMI6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1)

HSP 1 Score: 221.9 bits (564), Expect = 1.5e-54
Identity = 139/215 (64.65%), Postives = 158/215 (73.49%), Query Frame = 0 

Query: 1   MKSMKSRT-SKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPSESHRRHQKRPTPVG 60
           M+SMK R  SKSKPTAPPADLLVCFPAR+ LTLLP    SPARPP+E HRRH ++     
Sbjct: 1   MRSMKRRNHSKSKPTAPPADLLVCFPARAHLTLLP----SPARPPAEPHRRHYRK----- 60

Query: 61  AAQASPLLWAKELASEPTSPKVTCAGKIKIRP----ATKNWRSVMEEIERIHKKKKKKLP 120
            AQ SPL WAKE++SEPTSPKVTCAG+IKIRP    +TKNW+SVMEEIERIH KKK   P
Sbjct: 61  -AQPSPLPWAKEMSSEPTSPKVTCAGQIKIRPHSHRSTKNWQSVMEEIERIHNKKKN--P 120

Query: 121 NQNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSE------EXXXXXXXDRDGE 180
            +NQNP  F+REIVN LSC RGFRFDFRCFRGF QS IT++       XXXXXXX     
Sbjct: 121 IRNQNPFGFKREIVNFLSCLRGFRFDFRCFRGFPQSDITTDXXXXXXXXXXXXXXXXXXX 180

Query: 181 CESEEEPTKGSRRTMFAEWFMIVHE-KEETKPRNN 204
                  T+G  RTMF+EWFM++ E +EETKP NN
Sbjct: 181 XXXXXXXTRG--RTMFSEWFMVLQEGEEETKPINN 201

[Close]
BLAST of Carg20545 vs. TrEMBL
Match: tr|F6H0W4|F6H0W4_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05370 PE=4 SV=1)

HSP 1 Score: 178.3 bits (451), Expect = 1.9e-41
Identity = 115/253 (45.45%), Postives = 142/253 (56.13%), Query Frame = 0 

Query: 4   MKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPAR-------------PPSESHRR 63
           MK R  K+   AP ADLLVCFP+R+ LTL+PKPICSPAR                     
Sbjct: 1   MKGREGKA---APSADLLVCFPSRAHLTLMPKPICSPARXXXXXXXXXXXXXXXXXXXXX 60

Query: 64  HQKRPTPVGAAQASPLLWAKEL-----ASEPTSPKVTCAGKIKIRPAT---KNWRSVMEE 123
             K+ +     QASPLLWAK        SEPTSPKVTCAG+IK+R  T   KNW+SVMEE
Sbjct: 61  XXKKSSTRNGGQASPLLWAKTKPMGTEISEPTSPKVTCAGQIKVRHKTSSCKNWQSVMEE 120

Query: 124 IERIHKKKKKKLPNQNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXX 183
           IERIH  KK K        L F++EI+  L+C R  RFDFRCF  F +S  TS++     
Sbjct: 121 IERIHNNKKHKKRPTWVEALGFKKEIMQFLTCLRSIRFDFRCFGSFPESGNTSDDEEEDG 180

Query: 184 XXDRDGECESEEEPTKGSRRTMFAEWFMIVHE-------KEETKPRNN-------IGCSV 222
              +  +   EE     + RT+F++WFM++ E       KEE K ++        +  SV
Sbjct: 181 DQYQHNQVGVEESDDNETSRTIFSKWFMVLQENQSCGSNKEEIKEKSKSYGEESAVAPSV 240

[Close]
BLAST of Carg20545 vs. TrEMBL
Match: tr|A0A1U8A4G2|A0A1U8A4G2_NELNU (uncharacterized protein LOC104600126 OS=Nelumbo nucifera OX=4432 GN=LOC104600126 PE=4 SV=1)

HSP 1 Score: 171.8 bits (434), Expect = 1.8e-39
Identity = 115/247 (46.56%), Postives = 144/247 (58.30%), Query Frame = 0 

Query: 4   MKSRTSKSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPS---ESHRRHQKRPTPVGA 63
           MK R +K   TAPPADLLVCFP+R+ LTL+PKPICSPARP                    
Sbjct: 1   MKGRENK---TAPPADLLVCFPSRAHLTLMPKPICSPARPTEXXXXXXXXXXXXXXXXXX 60

Query: 64  AQASPLLWAKEL------ASEPTSPKVTCAGKIKIRP--ATKNWRSVMEEIERIHKKKKK 123
            QASPLLWAK         +EPTSPKVTCAG+IK+RP  ++KNW+SVMEEIER+H  +K+
Sbjct: 61  GQASPLLWAKNKQQAGTEIAEPTSPKVTCAGQIKVRPKSSSKNWQSVMEEIERLHNSRKQ 120

Query: 124 KLPNQNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGECES 183
           K        L F+++I+  L+C R  RFD RCF  FH S +    XXXXXXX        
Sbjct: 121 KKKPTWLETLGFKKDIMQFLTCLRSLRFDLRCFGSFHGSDVXXXXXXXXXXXXXXXXXXX 180

Query: 184 EEEPTKGS--RRTMFAEWFMIVHE--------KEETKPRNNIGC--------SVPPPNAL 222
               + GS   RT+F++WFM++ E        +E+     ++ C        S PPPNAL
Sbjct: 181 XXXXSDGSGASRTIFSKWFMVLQENQNNTFSKEEKCGEERDLSCDEGSVAAPSAPPPNAL 240

[Close]
BLAST of Carg20545 vs. TrEMBL
Match: tr|A0A2I4G1A9|A0A2I4G1A9_9ROSI (uncharacterized protein LOC109003828 isoform X1 OS=Juglans regia OX=51240 GN=LOC109003828 PE=4 SV=1)

HSP 1 Score: 169.1 bits (427), Expect = 1.2e-38
Identity = 110/251 (43.82%), Postives = 147/251 (58.57%), Query Frame = 0 

Query: 10  KSKPTAPPADLLVCFPARSPLTLLPKPICSPARPPS-----ESHRRHQ-----KRPTPVG 69
           ++   AP ADLLVCFP+R+ LTL+PKPICSPARP        SHR H+     KR +  G
Sbjct: 5   EANKAAPSADLLVCFPSRAHLTLMPKPICSPARPSETNKRHHSHRHHRGGQLMKRTSTRG 64

Query: 70  AAQASPLLWAK-----ELASEPTSPKVTCAGKIKIRPAT---KNWRSVMEEIERIH-KKK 129
             Q SPLLW+K        SEPTSPKVTCAG+IK+R  T    +W+SVMEE+E+IH   K
Sbjct: 65  GVQDSPLLWSKTKPMGSEISEPTSPKVTCAGQIKVRSKTSSCNSWQSVMEEVEKIHVNGK 124

Query: 130 KKKLPNQNQNPLRFRREIVNILSCFRGFRFDFRCFRGFHQSVITSEEXXXXXXXDRDGEC 189
            KK P+     +  +++I+  LSC R  RFD RCF  F +S IT+E+       + DGE 
Sbjct: 125 HKKRPSW----VEAKKDIMQFLSCLRSIRFDCRCFGTFRKSDITTED----EDGEEDGEY 184

Query: 190 ESEEEPTKGS------RRTMFAEWFMIVH------------EKEETKPRNNIGCSV--PP 222
              +   +GS       RT F++WF+++             E+E  +P ++  C++  PP
Sbjct: 185 RENQVGFEGSTDGNEASRTAFSKWFVVLQENQNNMLCKEDDEREIERPSDDHECNIAAPP 244

The following BLAST results are available for this feature:
BLAST of Carg20545 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022951866.19.7e-10692.38uncharacterized protein LOC111454598 [Cucurbita moschata][more]
XP_023537819.11.4e-10491.48uncharacterized protein LOC111798734 [Cucurbita pepo subsp. pepo][more]
XP_023002876.17.2e-10185.71uncharacterized protein LOC111496612 [Cucurbita maxima][more]
XP_023546364.15.0e-6263.33uncharacterized protein LOC111805493 [Cucurbita pepo subsp. pepo][more]
XP_008445342.24.0e-5963.03PREDICTED: uncharacterized protein LOC103488403 [Cucumis melo][more]
BLAST of Carg20545 vs. TAIR10
Match NameE-valueIdentityDescription
AT1G78110.11.9e-2637.80unknown protein[more]
AT1G22230.12.4e-1833.48unknown protein[more]
AT5G03110.14.5e-0427.27FUNCTIONS IN: molecular_function unknown[more]
BLAST of Carg20545 vs. Swiss-Prot
Match NameE-valueIdentityDescription
BLAST of Carg20545 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3BDB9|A0A1S3BDB9_CUCME2.6e-5963.03uncharacterized protein LOC103488403 OS=Cucumis melo OX=3656 GN=LOC103488403 PE=... [more]
tr|A0A0A0LMI6|A0A0A0LMI6_CUCSA1.5e-5464.65Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345900 PE=4 SV=1[more]
tr|F6H0W4|F6H0W4_VITVI1.9e-4145.45Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_18s0001g05370 PE=4 SV=... [more]
tr|A0A1U8A4G2|A0A1U8A4G2_NELNU1.8e-3946.56uncharacterized protein LOC104600126 OS=Nelumbo nucifera OX=4432 GN=LOC104600126... [more]
tr|A0A2I4G1A9|A0A2I4G1A9_9ROSI1.2e-3843.82uncharacterized protein LOC109003828 isoform X1 OS=Juglans regia OX=51240 GN=LOC... [more]
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg20545-RACarg20545-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 155..179
NoneNo IPR availablePANTHERPTHR33448FAMILY NOT NAMEDcoord: 8..222
NoneNo IPR availablePANTHERPTHR33448:SF3SUBFAMILY NOT NAMEDcoord: 8..222