Carg20543 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg20543
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Alpha-ketoglutarate-dependent dioxygenase alkB-like protein 2
Location	Cucurbita_argyrosperma_scaffold_113 : 186397 .. 188166 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

TCTTCTTCGCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAATTCTTCCCAATTTGTTTCTTCTTCTTCTTCTTCTTCTTCAATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGGTACTTTCTACATTTTTATCTTTTTCCTTTTCTTCTTTCCTTTCGTCTTCTTCTGCTTATTCTGTTTGTTTTTGTTGTTTTTGTAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGTGAGATCTAAATCGGTTTTGTTCTTGCTTATTTCATTCCTGTTATTTTGGATAATTTTTGTTTCGGTTTCTTTCTTGTGCCGAATTGTGAGTACTGTGAATTGTTAAGGTGGAAACTCGAATGAGCTAATCTGTTTCGTTTCGGTGTTTCCTTGATGTTGAGAAGACTGTTTTGTTCTCTCTCCCTATTTCTCATTCGCTGCTATTTTGTCGCTCTTTTTTAGTTGTGTAGCGCTTGTTGAATTTGTATCATTTCTATAAACCTCCGATCTGCTTGCTTAGTTTGTAAAAATTGGCCAAGTTATTCAAATTTCAAATCTCTATCTCTTCCTCCTTGCGTGGTAATATTCGTTTTGCTCAAATGACTGCTGATTGGATCTCAAATCTGTATTCCTTTCTGGTTTTCAAGGCATTTTCACAAATCTTTGATCAAATTTGTTCGTCCTTCCCGCATCAATTGATTTTAACGTCATTTGAATACAAATTTTCAAGTTGCTCTACAATCTTGAATTTGCTGGAGTCGTTTAGCTTGAGTTTCATATGAGGCGTCTCATTTGTTGTTCAATTTGCAAACACCAGGAAACCCTGTTCTGGATATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGGTATCCATCGAAGAAGATCATCATTTATTGCAGTTTATCTGTGACTGTGGGAAGAATTTGTGTTTGGTTAAGGCTTTTCTAACTTCTATTCTTGACGGCTCGATCAACTGCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATGTAAGTAGTACTCTTCTGATCAAGTAATTTTCAGGATGGAATTCTAGTCATTCTAATTTCTAATACATCCATTGAGAAGGCACACCCCACAAACGACAATTCTCATTTTGCTTAGAAATTACATAATTTAGTGTTAGGTTCTCAGCCATAGCTCGCTTGTTCGTTCGTTCGTTCGTCAGGCTGCATGGATAGATGGGTGTTGCATCAACCAATTTATCTTACTCGTTTGTTTGCATCTTAGTATCCTGATGGGGTTAGAATCTTAATGATGAAATCCTAGG

mRNA sequence

TCTTCTTCGCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAATTCTTCCCAATTTGTTTCTTCTTCTTCTTCTTCTTCTTCAATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGATATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATGTAAGTAGTACTCTTCTGATCAAGTAATTTTCAGGATGGAATTCTAGTCATTCTAATTTCTAATACATCCATTGAGAAGGCACACCCCACAAACGACAATTCTCATTTTGCTTAGAAATTACATAATTTAGTGTTAGGTTCTCAGCCATAGCTCGCTTGTTCGTTCGTTCGTTCGTCAGGCTGCATGGATAGATGGGTGTTGCATCAACCAATTTATCTTACTCGTTTGTTTGCATCTTAGTATCCTGATGGGGTTAGAATCTTAATGATGAAATCCTAGG

Coding sequence (CDS)

TCTTCTTCGCTTCCATTTCTCTCTCTCTCTCTCTCTCTCTCTCTCCTCTGCAATTCTTCCCAATTTGTTTCTTCTTCTTCTTCTTCTTCTTCAATGGACAGAGCTACTCCTGTTCGGAAGCCTCACACCTCTACTGCAGATCTGCTCACTTGGCCGGAAGTTCCGCCGGCTGATTCCTCTGCGCTTTCTTCTTCTGCTTCTCGCTCTGCTCCGAGGTCTCATCAGCCCTCCCCTGGGATTAGTAAGGTCGTCTTTGGAGGTCAGGTCACGGATGAGGAGGTTGAGAGCTTGAACAAAAGGAAACCCTGTTCTGGATATAAAATGAAGGAGATGACTGGCAGTGGCATTTTTGTTGCAAACGAAGAAGATGATGAACTAGAATCTGGAAGCGCCAACCCTTCACAGAATAAAACAGGAATACGTATGTACCAGCAAGCCTTGGCTGGGATTAGTCATATTTCATTCGGTGAAGAAGGAAGTGTTTCTCCTAAAAAACCAACTACTCTACCCGAGGTTGCGAAGCAGCGTGAGCTGAGCGGGAACCTAGAAAGCGATGCCGATGCAATGTTGAAGAAGCAGCTTTCTGATGCTAAATGCAAGGAGCTTAGTGGACATGATATATTCGCGCCTCCTCCTGAGATCTTACCCCGACCAACAACTGCACGCACTTTGGATTTAAAAGGAAGCATTGAGATTGGGGAGCCTGATAATGTAAGTAGTACTCTTCTGATCAAGTAA

Protein sequence

SSSLPFLSLSLSLSLLCNSSQFVSSSSSSSSMDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTDEEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGISHISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPPPEILPRPTTARTLDLKGSIEIGEPDNVSSTLLIK

Homology

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BLAST of Carg20543 vs. NCBI nr
Match: XP_022951840.1 (uncharacterized protein LOC111454570 [Cucurbita moschata] >XP_023002695.1 uncharacterized protein LOC111496478 [Cucurbita maxima] >XP_023537292.1 uncharacterized protein LOC111798406 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110
Identity = 206/208 (99.04%), Postives = 208/208 (100.00%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD
Sbjct: 1   MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP
Sbjct: 121 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDNVS 240
           PEILPRPTTARTLDLKGSIEIGEPDN++
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDNIN 208

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BLAST of Carg20543 vs. NCBI nr
Match: XP_004142997.1 (PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] >KGN62250.1 hypothetical protein Csa_2G345910 [Cucumis sativus])

HSP 1 Score: 385.2 bits (988), Expect = 1.7e-103
Identity = 194/206 (94.17%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDR TPVRKPHTSTADLLTWPE+PPADS AL SSASRSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFV NE D+ELESGSANPSQNKTGIRMYQQ LAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPSQNKTGIRMYQQTLAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTT+PEVAKQRELSGNLESDADA LKKQLSDAKCKELSGHDIFAPP
Sbjct: 121 HISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDN 238
           PEILPRPTTARTLDLKGSIEIGEPD+
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDS 206

[Close]

BLAST of Carg20543 vs. NCBI nr
Match: XP_008445341.1 (PREDICTED: uncharacterized protein LOC103488402 [Cucumis melo])

HSP 1 Score: 383.3 bits (983), Expect = 6.4e-103
Identity = 194/208 (93.27%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDR TPVRKPHTSTADLLTWPE+PPADS AL SSASRSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFV NE D+ELESGSANP QNKTGIRMYQQ LAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPLQNKTGIRMYQQTLAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTT+PEVAKQRELSGNLESDADA LKKQLSDAKCKELSGHDIFAPP
Sbjct: 121 HISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDNVS 240
           PEILPRPTTARTLDLKGSIEIGEPD+ S
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDSRS 208

[Close]

BLAST of Carg20543 vs. NCBI nr
Match: XP_022132174.1 (uncharacterized protein LOC111005096 [Momordica charantia])

HSP 1 Score: 376.7 bits (966), Expect = 6.0e-101
Identity = 190/204 (93.14%), Postives = 196/204 (96.08%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDR TPVRKPHTSTADLLTWPEVP ADS AL SSA+RSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPEVPAADSPALPSSATRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVE+LNKRKPCSGYKMKEMTGSGIFVANE DDELESGSANP+QNKTGIRMYQQA+AGIS
Sbjct: 61  EEVETLNKRKPCSGYKMKEMTGSGIFVANEGDDELESGSANPAQNKTGIRMYQQAMAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTT+PEVAKQRELSGNLESD+DA LKKQLSDAKCKELSGHDIFA P
Sbjct: 121 HISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDSDAKLKKQLSDAKCKELSGHDIFAAP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEP 236
           PEILPRPTTARTLDLKGSIEIGEP
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEP 204

[Close]

BLAST of Carg20543 vs. NCBI nr
Match: XP_023547326.1 (uncharacterized protein LOC111806182 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 371.7 bits (953), Expect = 1.9e-99
Identity = 189/206 (91.75%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDRATPVRKPHTSTADLLTWPE+PPADS A  SSASRSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRATPVRKPHTSTADLLTWPELPPADSPAFPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFV NE DDE ESGSANPSQ+KTGIRMYQQ LAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDDEQESGSANPSQSKTGIRMYQQTLAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEG VSPKKPTTLPEVAKQRELSGNL SDAD  LKKQLSDAK +ELSGHDIFAPP
Sbjct: 121 HISFGEEGGVSPKKPTTLPEVAKQRELSGNLVSDADEKLKKQLSDAKYQELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDN 238
           PEILPRPTTARTLDLKGSIEIGEPD+
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDD 206

[Close]

BLAST of Carg20543 vs. TAIR10
Match: AT1G35780.1 (unknown protein)

HSP 1 Score: 255.4 bits (651), Expect = 3.6e-68
Identity = 139/205 (67.80%), Postives = 154/205 (75.12%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M++ TPVRKPH STADLLTWPE  P +S A  S  SRSA RSHQPS GISKVVFGGQVTD
Sbjct: 1   MEKNTPVRKPHMSTADLLTWPENQPFESPAAVS--SRSAARSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCS YKMKE+TGSGIF   EE+D+ E  SAN + N       Q   A +S
Sbjct: 61  EEVESLNKRKPCSNYKMKEITGSGIFSVYEENDDSELASANSATNGKSRTFQQPPAAIMS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEE  V+PKKP T+PEVAKQRELSG LE  +DA L KQ SDAKCKELSGH+IFAPP
Sbjct: 121 HISFGEEEIVTPKKPATVPEVAKQRELSGTLEYQSDAKLNKQFSDAKCKELSGHNIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPD 237
           PEI  RP T R L  K + ++GE D
Sbjct: 181 PEIKLRP-TVRALAYKDNFDLGESD 202

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BLAST of Carg20543 vs. TAIR10
Match: AT1G78150.3 (unknown protein)

HSP 1 Score: 237.3 bits (604), Expect = 1.0e-62
Identity = 136/231 (58.87%), Postives = 157/231 (67.97%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M+R+TPVRKPHTSTADLLTW EVPP DS    SSASRSA RSHQPS GISKVVFGGQVTD
Sbjct: 1   MERSTPVRKPHTSTADLLTWSEVPPPDS---PSSASRSAVRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNK-----------------------------RKPCSGYKMKEMTGSGIFVANEE 151
           EEVESLN+                             RKPCS +KMKE+TGSGIF  NE+
Sbjct: 61  EEVESLNRRILDDAFDSFMRLVIYTNVKTCENVYDVIRKPCSEHKMKEITGSGIFSRNEK 120

Query: 152 DDELESGSANPSQNKTGIRMYQQALAGISHISFGEEGSVSPKKPTTLPEVAKQRELSGNL 211
           DD  E            + +YQQA+ GIS ISFGEE ++SPKKP T+PEVAKQRELSG +
Sbjct: 121 DDASEP-----------LPVYQQAVNGISQISFGEEENLSPKKPATVPEVAKQRELSGTM 180

Query: 212 ESDADAMLKKQLSDAKCKELSGHDIFAPPPEILPRPTTARTLDLKGSIEIG 234
           E+++   L+KQLSDAK KE+SG +IFAPPPEI PR  T R L LK +  +G
Sbjct: 181 ENESANKLQKQLSDAKYKEISGQNIFAPPPEIKPRSGTNRALALKDNFNLG 217

[Close]

BLAST of Carg20543 vs. TAIR10
Match: AT4G39860.1 (unknown protein)

HSP 1 Score: 222.2 bits (565), Expect = 3.4e-58
Identity = 119/204 (58.33%), Postives = 145/204 (71.08%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M+R TPVR PHTSTADLL+W E P        S+A     RSHQPS GISK++ GGQ+TD
Sbjct: 1   MERNTPVRNPHTSTADLLSWSETPXXXXXXTPSAA-----RSHQPSDGISKILGGGQITD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EE +SLNK K CSGYK+KEMTGSGIF    +  ++ S S   +  KTG+R YQQ L G+S
Sbjct: 61  EEAQSLNKLKNCSGYKLKEMTGSGIFT---DKGKVGSESDATTDPKTGLRYYQQTLNGMS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
            ISF  +G+VSPKKPTTL EVAKQRELSGNL ++AD    KQ+S AK +E+SGHDIFAPP
Sbjct: 121 QISFSADGNVSPKKPTTLTEVAKQRELSGNLLTEADLKSNKQISSAKIEEISGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEP 236
            EI PR   A   + +G+ ++GEP
Sbjct: 181 SEIQPRSLVAAQQEARGNRDMGEP 196

[Close]

BLAST of Carg20543 vs. TAIR10
Match: AT2G22270.1 (unknown protein)

HSP 1 Score: 110.5 bits (275), Expect = 1.4e-24
Identity = 91/217 (41.94%), Postives = 117/217 (53.92%), Query Frame = 0


Query: 41  PHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVV-FGGQVTDEEVESLN- 100
           PH STADLL+W E+   D S        +A RS+QPS G++ V+  GGQ+T+ E +SLN 
Sbjct: 8   PHHSTADLLSWSEIRRPDYST-------AANRSNQPSDGMNDVLGGGGQITNAETKSLNT 67

Query: 101 ---KRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGISHISF 160
               RK CSG+K+KEMTGS IF     DD    G  +P+ ++T I  +Q  L   S ISF
Sbjct: 68  NVSHRKNCSGHKLKEMTGSDIF----SDD----GKYDPN-HQTRIHYHQDQL---SQISF 127

Query: 161 -GEEGSVSP---------------------------------KKPTTLPEVAKQRELSGN 218
            GEE + +P                                 KKPTTL E AKQ+ELS  
Sbjct: 128 SGEENATTPMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKKPTTLNEAAKQKELSRT 187

[Close]

BLAST of Carg20543 vs. TAIR10
Match: AT2G22260.1 (oxidoreductase, 2OG-Fe(II) oxygenase family protein)

HSP 1 Score: 52.4 bits (124), Expect = 4.7e-07
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 67  SRSAPRSHQPSPGISKVVFGGQVTDEEVESLNKRKPCSGYKMKEMTGSGIFVANEEDD 125
           S +A RS+QPS   S  +  GQ+T+EE ESL  +K CSG+K+KE+T S  F  N +DD
Sbjct: 7   STAANRSNQPS---SDGISDGQITNEEAESLINKKNCSGHKLKEVTDSDTFSDNGKDD 61

[Close]

BLAST of Carg20543 vs. Swiss-Prot
Match: sp|Q9SIE0|ALKB2_ARATH (DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 SV=2)

HSP 1 Score: 52.4 bits (124), Expect = 8.4e-06
Identity = 29/58 (50.00%), Postives = 39/58 (67.24%), Query Frame = 0


Query: 67  SRSAPRSHQPSPGISKVVFGGQVTDEEVESLNKRKPCSGYKMKEMTGSGIFVANEEDD 125
           S +A RS+QPS   S  +  GQ+T+EE ESL  +K CSG+K+KE+T S  F  N +DD
Sbjct: 7   STAANRSNQPS---SDGISDGQITNEEAESLINKKNCSGHKLKEVTDSDTFSDNGKDD 61

[Close]

BLAST of Carg20543 vs. TrEMBL
Match: tr|A0A0A0LK08|A0A0A0LK08_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345910 PE=4 SV=1)

HSP 1 Score: 385.2 bits (988), Expect = 1.1e-103
Identity = 194/206 (94.17%), Postives = 198/206 (96.12%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDR TPVRKPHTSTADLLTWPE+PPADS AL SSASRSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFV NE D+ELESGSANPSQNKTGIRMYQQ LAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPSQNKTGIRMYQQTLAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTT+PEVAKQRELSGNLESDADA LKKQLSDAKCKELSGHDIFAPP
Sbjct: 121 HISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDN 238
           PEILPRPTTARTLDLKGSIEIGEPD+
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDS 206

[Close]

BLAST of Carg20543 vs. TrEMBL
Match: tr|A0A1S3BD79|A0A1S3BD79_CUCME (uncharacterized protein LOC103488402 OS=Cucumis melo OX=3656 GN=LOC103488402 PE=4 SV=1)

HSP 1 Score: 383.3 bits (983), Expect = 4.2e-103
Identity = 194/208 (93.27%), Postives = 198/208 (95.19%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           MDR TPVRKPHTSTADLLTWPE+PPADS AL SSASRSAPRSHQPS GISKVVFGGQVTD
Sbjct: 1   MDRTTPVRKPHTSTADLLTWPELPPADSPALPSSASRSAPRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPSQNKTGIRMYQQALAGIS 151
           EEVESLNKRKPCSGYKMKEMTGSGIFV NE D+ELESGSANP QNKTGIRMYQQ LAGIS
Sbjct: 61  EEVESLNKRKPCSGYKMKEMTGSGIFVGNEGDEELESGSANPLQNKTGIRMYQQTLAGIS 120

Query: 152 HISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAPP 211
           HISFGEEGSVSPKKPTT+PEVAKQRELSGNLESDADA LKKQLSDAKCKELSGHDIFAPP
Sbjct: 121 HISFGEEGSVSPKKPTTVPEVAKQRELSGNLESDADAKLKKQLSDAKCKELSGHDIFAPP 180

Query: 212 PEILPRPTTARTLDLKGSIEIGEPDNVS 240
           PEILPRPTTARTLDLKGSIEIGEPD+ S
Sbjct: 181 PEILPRPTTARTLDLKGSIEIGEPDSRS 208

[Close]

BLAST of Carg20543 vs. TrEMBL
Match: tr|W9S3B2|W9S3B2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021568 PE=4 SV=1)

HSP 1 Score: 339.7 bits (870), Expect = 5.3e-90
Identity = 175/208 (84.13%), Postives = 187/208 (89.90%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M+RATPVRKPHTSTADLLTW E PPADS A++S ASRSA RSHQPS GISKVVFGGQVTD
Sbjct: 1   MERATPVRKPHTSTADLLTWSETPPADSPAVASGASRSAARSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESG--SANPSQNKTGIRMYQQALAG 151
           EE + LNKRKPCSGYKMKEMTGSGIFVAN E+DE ESG  SA P+ NKTG+RMYQQA+AG
Sbjct: 61  EEAQDLNKRKPCSGYKMKEMTGSGIFVANGENDEAESGIDSATPN-NKTGVRMYQQAIAG 120

Query: 152 ISHISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFA 211
           ISHISFG+E SVSPKKP TLPEVAKQRELSG L+SDADA LKKQLSDAKCKELSGHDIFA
Sbjct: 121 ISHISFGDEESVSPKKPATLPEVAKQRELSGTLDSDADAKLKKQLSDAKCKELSGHDIFA 180

Query: 212 PPPEILPRPTTARTLDLKGSIEIGEPDN 238
            PPEILPRPTTARTLDLKGSI+IG+  N
Sbjct: 181 APPEILPRPTTARTLDLKGSIDIGDSSN 207

[Close]

BLAST of Carg20543 vs. TrEMBL
Match: tr|A0A2P5G1T8|A0A2P5G1T8_9ROSA (N-lysine methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_003000 PE=4 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 7.2e-87
Identity = 168/205 (81.95%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M+R+TPVRKPHTSTADLLTW E PPADS A++S+ASRS  RSHQPS GISKVVFGGQVTD
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPADSPAVASAASRSGARSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPS-QNKTGIRMYQQALAGI 151
           EE +SLNKRKPCSGYKMKEMTGSGIFVAN E +E E+G A+ +  N+TGIRMYQQA+AGI
Sbjct: 61  EEAQSLNKRKPCSGYKMKEMTGSGIFVANGESEEPEAGDASATPNNRTGIRMYQQAIAGI 120

Query: 152 SHISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAP 211
           SHISF EE SVSPK+PTT+PEVAKQRELSG LES+ DA LKKQLSDAKCKELSGHDIFAP
Sbjct: 121 SHISFAEEESVSPKRPTTIPEVAKQRELSGTLESE-DAKLKKQLSDAKCKELSGHDIFAP 180

Query: 212 PPEILPRPTTARTLDLKGSIEIGEP 236
           PPEILPRPTTARTLDL+G I+IGEP
Sbjct: 181 PPEILPRPTTARTLDLRGHIDIGEP 204

[Close]

BLAST of Carg20543 vs. TrEMBL
Match: tr|A0A2P5CKL7|A0A2P5CKL7_PARAD (N-lysine methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_144840 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 9.4e-87
Identity = 168/205 (81.95%), Postives = 185/205 (90.24%), Query Frame = 0


Query: 32  MDRATPVRKPHTSTADLLTWPEVPPADSSALSSSASRSAPRSHQPSPGISKVVFGGQVTD 91
           M+R+TPVRKPHTSTADLLTW E PPADS A++S+ASRS  RSHQPS GISKVVFGGQVTD
Sbjct: 1   MERSTPVRKPHTSTADLLTWSETPPADSPAVASAASRSGSRSHQPSDGISKVVFGGQVTD 60

Query: 92  EEVESLNKRKPCSGYKMKEMTGSGIFVANEEDDELESGSANPS-QNKTGIRMYQQALAGI 151
           EE +SLNKRKPCSGYKMKEMTGSGIFVAN E +E E+G A+ +  N+TGIRMYQQA+AGI
Sbjct: 61  EEAQSLNKRKPCSGYKMKEMTGSGIFVANGESEEPEAGDASATPNNRTGIRMYQQAVAGI 120

Query: 152 SHISFGEEGSVSPKKPTTLPEVAKQRELSGNLESDADAMLKKQLSDAKCKELSGHDIFAP 211
           SHISF EE SVSPK+PTT+PEVAKQRELSG LES+ DA LKKQLSDAKCKELSGHDIFAP
Sbjct: 121 SHISFAEEESVSPKRPTTIPEVAKQRELSGTLESE-DAKLKKQLSDAKCKELSGHDIFAP 180

Query: 212 PPEILPRPTTARTLDLKGSIEIGEP 236
           PPEILPRPTTARTLDL+G I+IGEP
Sbjct: 181 PPEILPRPTTARTLDLRGHIDIGEP 204

The following BLAST results are available for this feature:

BLAST of Carg20543 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022951840.1	1.1e-110	99.04	uncharacterized protein LOC111454570 [Cucurbita moschata] >XP_023002695.1 unchar...	[more]
XP_004142997.1	1.7e-103	94.17	PREDICTED: uncharacterized protein LOC101215119 [Cucumis sativus] >KGN62250.1 hy...	[more]
XP_008445341.1	6.4e-103	93.27	PREDICTED: uncharacterized protein LOC103488402 [Cucumis melo]	[more]
XP_022132174.1	6.0e-101	93.14	uncharacterized protein LOC111005096 [Momordica charantia]	[more]
XP_023547326.1	1.9e-99	91.75	uncharacterized protein LOC111806182 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Carg20543 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G35780.1	3.6e-68	67.80	unknown protein	[more]
AT1G78150.3	1.0e-62	58.87	unknown protein	[more]
AT4G39860.1	3.4e-58	58.33	unknown protein	[more]
AT2G22270.1	1.4e-24	41.94	unknown protein	[more]
AT2G22260.1	4.7e-07	50.00	oxidoreductase, 2OG-Fe(II) oxygenase family protein	[more]

BLAST of Carg20543 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SIE0\|ALKB2_ARATH	8.4e-06	50.00	DNA oxidative demethylase ALKBH2 OS=Arabidopsis thaliana OX=3702 GN=ALKBH2 PE=2 ...	[more]

BLAST of Carg20543 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LK08\|A0A0A0LK08_CUCSA	1.1e-103	94.17	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345910 PE=4 SV=1	[more]
tr\|A0A1S3BD79\|A0A1S3BD79_CUCME	4.2e-103	93.27	uncharacterized protein LOC103488402 OS=Cucumis melo OX=3656 GN=LOC103488402 PE=...	[more]
tr\|W9S3B2\|W9S3B2_9ROSA	5.3e-90	84.13	Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_021568 PE=4 SV=1	[more]
tr\|A0A2P5G1T8\|A0A2P5G1T8_9ROSA	7.2e-87	81.95	N-lysine methyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_003000 PE=...	[more]
tr\|A0A2P5CKL7\|A0A2P5CKL7_PARAD	9.4e-87	81.95	N-lysine methyltransferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_144840...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR025131	DUF4057

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg20543-RA	Carg20543-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025131	Domain of unknown function DUF4057	PFAM	PF13266	DUF4057	coord: 34..237 e-value: 2.1E-102 score: 342.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 22..86
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..76
None	No IPR available	PANTHER	PTHR31132:SF2	EXPRESSED PROTEIN	coord: 32..238
None	No IPR available	PANTHER	PTHR31132	FAMILY NOT NAMED	coord: 32..238

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg20543	Cla022090	Watermelon (97103) v1	carwmB0649
Carg20543	Cla014145	Watermelon (97103) v1	carwmB0650
Carg20543	Csa6G500430	Cucumber (Chinese Long) v2	carcuB0672
Carg20543	MELO3C007758	Melon (DHL92) v3.5.1	carmeB0650
Carg20543	MELO3C011358	Melon (DHL92) v3.5.1	carmeB0649
Carg20543	ClCG01G018780	Watermelon (Charleston Gray)	carwcgB0631
Carg20543	ClCG08G011050	Watermelon (Charleston Gray)	carwcgB0633
Carg20543	CSPI06G30240	Wild cucumber (PI 183967)	carcpiB0682
Carg20543	Cucsa.104390	Cucumber (Gy14) v1	carcgyB0725
Carg20543	CmaCh12G001530	Cucurbita maxima (Rimu)	carcmaB0920
Carg20543	CmaCh05G004960	Cucurbita maxima (Rimu)	carcmaB0921
Carg20543	CmoCh12G001180	Cucurbita moschata (Rifu)	carcmoB0893
Carg20543	CmoCh05G005190	Cucurbita moschata (Rifu)	carcmoB0894
Carg20543	Lsi08G009590	Bottle gourd (USVL1VR-Ls)	carlsiB593
Carg20543	Cp4.1LG11g04350	Cucurbita pepo (Zucchini)	carcpeB0924
Carg20543	Cp4.1LG07g01340	Cucurbita pepo (Zucchini)	carcpeB0925
Carg20543	CsGy6G029730	Cucumber (Gy14) v2	carcgybB0648
Carg20543	MELO3C007758.2	Melon (DHL92) v3.6.1	carmedB0660
Carg20543	MELO3C011358.2	Melon (DHL92) v3.6.1	carmedB0659
Carg20543	CsaV3_6G045450	Cucumber (Chinese Long) v3	carcucB0684
Carg20543	Cla97C01G018220	Watermelon (97103) v2	carwmbB0677
Carg20543	Cla97C08G153990	Watermelon (97103) v2	carwmbB0679
Carg20543	Bhi04G000620	Wax gourd	carwgoB0765
Carg20543	Bhi03G000908	Wax gourd	carwgoB0767

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
Carg20543	Carg08184	Silver-seed gourd	carcarB068

The following block(s) are covering this gene:

None