Carg20539 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TGGAGGTTTCTGAAGCTTCTCTAAAATTCCGACATCACTTTCGCCGGAAGTTTCAAAGATTTCCCGTCGCTCTTTTCAGCGCTTGAATTCTCCTTTATATCTTATCGTCGGCTTAGTCCGGGGTAAGCTATGGAATTACTTCAGTTTTATTATCAATAGTCTCTCATGTTTTGTCAATATTGTCTATTAGAATCACTTTTCATCCTCGATCAAGCCCGACCTATCTGTTAAAATCGTTCTTGTTGATATATATATATATCGATATATAGTGATTTTGGAAATCCACCGTTGTTCTGTCATGACTTCAGTTGTTGATTTCGATTGCATATGTTCATTTGACCTCGAATTGATTTTGATTTTCGTTTTATTGTTAGGGAAATTGTTGAGTATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGTATGAGATTGTTCTCTCTGCATAAAGCCCTGTATGACTATTTGGAAATCGAGGGTTTGCTCCTTGTATCGCCCTCGCATGGTTAATATTTCTGATTCCGAAACCACTTTTAATCGATAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAGTAAGAAGTGATCTAACTTATTATCTTACTCTTGATTATTACGATCGAGATCTTCAGACGTCGGGCCAACTCCCATTTATTCATGTTATCTTACTGCAATCCTAGTTATCAGAATTTTTGTAGATATGACTACTGCAAGTCACCACAGGTTTCTTTTAACAAACAGTACAGGGTTATGGTTCAGTCTTGTTATGAGTCGAAGCATACAAATTTTAAGAATGAGCTAACCTTTTGCAACTTTAGTATAGAAAAAGTGTCCAACTAATGATCTTGTCGGTGGAACAAAACGTTCTTGTGGGTGACGCATCCATAGGGTGAGAAATTCATTTCTTCTAGTAATGTTATTGTTATTACTCCAATCCGTGAGCTGTGCACATGCTTTATATTAAATGTGGTTCATTGATCATTTTATTACTTATGCTACACACTCCTATCTCAAGAACCATATATGTGAAATAGCACGTATTCGAATTTATTCTCATCTCAGAAACTGCGTACGCCTAGGTTTTGGTTCATTCTTCAAAATAAACGTCTGATGTATCTGATATACAATCCTCTTTATTCATTGCATCGAAATAAAACAACTGGAACATGAGGGCTGGCATTTTTTTAGCATGAAAGTTGTGGCTATGGGTTGTAGAAAGTCATACTAAATTCAATGGATGTACAGACTGCTGAATGTGGTTATTTGGTTACAAATTTTCTTAGTCGCTGAATAAGCTCTCATTTCGTCAAGAACTAGGATCTGCTGTATGCTTCATGGCTTGCCATTAATATTCTAATTTTGGGGTTACTTCCATCTGACATGGCTTACTGCAAAACTATATCGTTATTGGATCTTGCTTTAACTCTTGTCACTACATGCCTTCAGATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACTGCGCACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGGTTAGCTCTATGGCTGTAGTTTCTTAATCCAATGCATACTTGGTAGATTTAGAGTGATAGAAAGCCAGCTTACACATCAAATGGATTTCATTCATAAACTTTTTCTTTCATCTAATTTTGGAGACACTAATTGTAACTCAAGCCCACCGCTAGCAGATATTGTCCTCTTTGGGTTTTCCGTTTTGGGCTTCTCCTCAAGGTTTTACCGTTTTAAAAATCTTGAGGGGAAGCCCAAATGGGAAAGCCCAAAGAGGACAATATTTGTTAGCGGTAGGCTTGGGCCGTTACACTAATTGTACATTACCTAGAGAAGATGTTGCTTATCAGATAGTTATACTAAGTTTTATACCATATTAACTGACTAAAAAAATATTTCAACGAGTTTCTTAGAGCAAAAGTTCCAATTTTTTTGCTTCTCTTTCATCTAATCTAGTACATTACTTTGAAAAGATGTTGCTTATCAGATAGCCATGCTACATTTATGCAATATTGATCGACTCACAATGTTTCAAAGAGTTTCTTAGGGCAGAATGCCATTTTTTGCTTTATAATGGAACCTGGCAATACACTGCAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTGTCTGAAAATGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTCCAGCAAAGGTCAGTAAACTCTGTACTATATGCTTGGTAACTGCAATTGAGCAACTTCAACATAATTCGATGACCATAGAAGATACTGGAAAGACGGGTTTACAGGTTCATCTTATGCTTGCCGTGCTTTGTAGATATCTGCAGAAGGCCAAAGTAAATGGTTCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGGTATGCAGCTTGTCTATATGTTTATATAGTGATGGATGAATATGTTGTTTTTAGTACAAATAAATGATAATCTTGTAGCATAAAATCTCATAAAGTTGCTAAATTTAAACTTATTATTTGCTTACTTTGGAAGAAGATTAAATGAACACGAGGAATAGAATCCCATAATCGTATTGTCGTGCATTTTAGATCATGTGCCGAAAAATATACAGGATGTCTATTAATAATTAGTTTTGCGTAATTTCTTAAGTAGCATAAAAATTGTGCTTAATATGGATGGTTGGATGGACGAATCAATGCTACCATGAATGATGGAGCCCATCTTCTGAAGGATTCGCTGTTTATCTGTCTGGAGTGATATCTGTCTGGTTTCTGTTGAATCTAGTTTGCTTTCAGCCTATCATTGCATGTTTCTAATAATTGTGCTTCGACAGCATCAGATCATAGCTTCACGCATTCGACTTAGTTTCTCCTATTCCAAGCTGTCTTTTGCTGCTACAGAATGTCCAAGCATATTATAA TGGAGGTTTCTGAAGCTTCTCTAAAATTCCGACATCACTTTCGCCGGAAGTTTCAAAGATTTCCCGTCGCTCTTTTCAGCGCTTGAATTCTCCTTTATATCTTATCGTCGGCTTAGTCCGGGGGAAATTGTTGAGTATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACTGCGCACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTGTCTGAAAATGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTCCAGCAAAGATATCTGCAGAAGGCCAAAGTAAATGGTTCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGCATCAGATCATAGCTTCACGCATTCGACTTAGTTTCTCCTATTCCAAGCTGTCTTTTGCTGCTACAGAATGTCCAAGCATATTATAA ATGGCAAGTTCAGGAGATTATCTTTCCCAGATTGACATTTCGAACGAGGAAAAGGACAAGCTCGTGGCGGAAGTTATCCGCTATATCATATTCAAAACTCATCAAAATTCTGGATGTCCCATCAAAAGGGAAGAGCTTACTCAGATCGTAACAAAAAATTATAGGAATCGAGGATTGCCGGCTATTGTGATAGAAGAAGCTAAAGAGAAGCTGTCAAGCATTTTTGGTTATGAGTTGAGGGAACTTCAAAGAGCACGGCCTTCATCCACTGCCCAAGGGCACCCTCCTCAACATAATGTTGTAGATTCAAAATCCTATGTTCTCATAAGCAAGCTTCCTGCGGAGGTTTATAGAAAGTATGTTGAGGATGTCGATACTGCGCACGTGACTGGTTTTAATTTTGTTGTAGTTAGTATTGTACATCTGGCTGGAGGCAAAATTCCTGAAGAAAGCCTTTGGCATCACTTGAGACGAATGGGGTTGTCTGAAAATGATGAAAAACATCCAGTCCTTGGCAACATCAAGCAGGCAGTAGAGTTGCTTGTCCAGCAAAGATATCTGCAGAAGGCCAAAGTAAATGGTTCTGAAGGGAATATCACGTTCTACGAGCTTGCTGAAAGAGCTATAGATGGACCAGTTAGTGAAAAGATTAAAGAATATGTAGCACAGCATCAGATCATAGCTTCACGCATTCGACTTAGTTTCTCCTATTCCAAGCTGTCTTTTGCTGCTACAGAATGTCCAAGCATATTATAA MASSGDYLSQIDISNEEKDKLVAEVIRYIIFKTHQNSGCPIKREELTQIVTKNYRNRGLPAIVIEEAKEKLSSIFGYELRELQRARPSSTAQGHPPQHNVVDSKSYVLISKLPAEVYRKYVEDVDTAHVTGFNFVVVSIVHLAGGKIPEESLWHHLRRMGLSENDEKHPVLGNIKQAVELLVQQRYLQKAKVNGSEGNITFYELAERAIDGPVSEKIKEYVAQHQIIASRIRLSFSYSKLSFAATECPSIL
BLAST of Carg20539 vs. NCBI nr
Match: XP_023002674.1 (melanoma-associated antigen 1 [Cucurbita maxima] >XP_023002675.1 melanoma-associated antigen 1 [Cucurbita maxima]) HSP 1 Score: 441.0 bits (1133), Expect = 2.6e-120 Identity = 221/223 (99.10%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Carg20539 vs. NCBI nr
Match: XP_022952014.1 (melanoma-associated antigen 2 [Cucurbita moschata] >XP_022952015.1 melanoma-associated antigen 2 [Cucurbita moschata]) HSP 1 Score: 438.7 bits (1127), Expect = 1.3e-119 Identity = 219/223 (98.21%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Carg20539 vs. NCBI nr
Match: XP_023538088.1 (melanoma-associated antigen 1 [Cucurbita pepo subsp. pepo] >XP_023538089.1 melanoma-associated antigen 1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 436.8 bits (1122), Expect = 5.0e-119 Identity = 219/223 (98.21%), Postives = 221/223 (99.10%), Query Frame = 0
BLAST of Carg20539 vs. NCBI nr
Match: XP_022131643.1 (melanoma-associated antigen 1 [Momordica charantia]) HSP 1 Score: 408.7 bits (1049), Expect = 1.4e-110 Identity = 200/223 (89.69%), Postives = 214/223 (95.96%), Query Frame = 0
BLAST of Carg20539 vs. NCBI nr
Match: XP_008444839.1 (PREDICTED: uncharacterized protein LOC103488065 [Cucumis melo] >XP_008444840.1 PREDICTED: uncharacterized protein LOC103488065 [Cucumis melo]) HSP 1 Score: 387.9 bits (995), Expect = 2.6e-104 Identity = 193/223 (86.55%), Postives = 205/223 (91.93%), Query Frame = 0
BLAST of Carg20539 vs. TAIR10
Match: AT1G34770.1 (MAGE protein (InterPro:IPR002190)) HSP 1 Score: 297.7 bits (761), Expect = 6.5e-81 Identity = 150/224 (66.96%), Postives = 182/224 (81.25%), Query Frame = 0
BLAST of Carg20539 vs. Swiss-Prot
Match: sp|P43361|MAGA8_HUMAN (Melanoma-associated antigen 8 OS=Homo sapiens OX=9606 GN=MAGEA8 PE=1 SV=2) HSP 1 Score: 71.6 bits (174), Expect = 1.4e-11 Identity = 60/221 (27.15%), Postives = 110/221 (49.77%), Query Frame = 0
BLAST of Carg20539 vs. Swiss-Prot
Match: sp|P43363|MAGAA_HUMAN (Melanoma-associated antigen 10 OS=Homo sapiens OX=9606 GN=MAGEA10 PE=2 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 4.4e-10 Identity = 50/185 (27.03%), Postives = 92/185 (49.73%), Query Frame = 0
BLAST of Carg20539 vs. Swiss-Prot
Match: sp|P43355|MAGA1_HUMAN (Melanoma-associated antigen 1 OS=Homo sapiens OX=9606 GN=MAGEA1 PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 7.5e-10 Identity = 60/217 (27.65%), Postives = 106/217 (48.85%), Query Frame = 0
BLAST of Carg20539 vs. Swiss-Prot
Match: sp|P43356|MAGA2_HUMAN (Melanoma-associated antigen 2 OS=Homo sapiens OX=9606 GN=MAGEA2 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 6.6e-06 Identity = 41/175 (23.43%), Postives = 78/175 (44.57%), Query Frame = 0
BLAST of Carg20539 vs. Swiss-Prot
Match: sp|P43365|MAGAC_HUMAN (Melanoma-associated antigen 12 OS=Homo sapiens OX=9606 GN=MAGEA12 PE=1 SV=2) HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05 Identity = 43/175 (24.57%), Postives = 77/175 (44.00%), Query Frame = 0
BLAST of Carg20539 vs. TrEMBL
Match: tr|A0A1S3BBA9|A0A1S3BBA9_CUCME (uncharacterized protein LOC103488065 OS=Cucumis melo OX=3656 GN=LOC103488065 PE=4 SV=1) HSP 1 Score: 387.9 bits (995), Expect = 1.8e-104 Identity = 193/223 (86.55%), Postives = 205/223 (91.93%), Query Frame = 0
BLAST of Carg20539 vs. TrEMBL
Match: tr|A0A0A0LL83|A0A0A0LL83_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G368960 PE=4 SV=1) HSP 1 Score: 375.6 bits (963), Expect = 9.0e-101 Identity = 187/223 (83.86%), Postives = 203/223 (91.03%), Query Frame = 0
BLAST of Carg20539 vs. TrEMBL
Match: tr|A0A2P4KPK3|A0A2P4KPK3_QUESU (Putative ribonuclease h protein OS=Quercus suber OX=58331 GN=CFP56_51136 PE=4 SV=1) HSP 1 Score: 350.9 bits (899), Expect = 2.4e-93 Identity = 166/223 (74.44%), Postives = 198/223 (88.79%), Query Frame = 0
BLAST of Carg20539 vs. TrEMBL
Match: tr|A0A2N9F9S0|A0A2N9F9S0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS11642 PE=4 SV=1) HSP 1 Score: 350.1 bits (897), Expect = 4.0e-93 Identity = 165/223 (73.99%), Postives = 197/223 (88.34%), Query Frame = 0
BLAST of Carg20539 vs. TrEMBL
Match: tr|A0A2I4GF84|A0A2I4GF84_9ROSI (melanoma-associated antigen 2 OS=Juglans regia OX=51240 GN=LOC109007354 PE=4 SV=1) HSP 1 Score: 349.4 bits (895), Expect = 6.9e-93 Identity = 167/223 (74.89%), Postives = 200/223 (89.69%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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